BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G58460.1 Length=2574 Score E Sequences producing significant alignments: (Bits) Value Ahg495963 jgi|Araly1|495963|fgenesh2_kg.8__1779__AT5G58460.1 3892 0.0 Ahg330263 jgi|Araly1|330263|fgenesh1_pm.C_scaffold_7002490 2388 0.0 > Ahg495963 jgi|Araly1|495963|fgenesh2_kg.8__1779__AT5G58460.1 Length=2583 Score = 3892 bits (2107), Expect = 0.0 Identities = 2436/2593 (94%), Gaps = 29/2593 (1%) Strand=Plus/Plus Query 1 ATGGTTAGGTCTTTCCCAAGTGATGGCTGGAGTGCCCTGCCTACCCGTTTTGGGTTCTGG 60 |||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct 1 ATGGTTAGGTATTTCCCAAGTGATGACTGGAGTGCCCTGCCTACCCGTTTCGGGTTCTGG 60 Query 61 CCAGAGAATCCAACCACCGCCGGAGTGGTCAGCAGTCGTGTTTTCTCAGCCAGACTTCCG 120 || | ||||||||||||| |||||||||||||||| ||||||||||| || ||||||||| Sbjct 61 CCGGGGAATCCAACCACCACCGGAGTGGTCAGCAGCCGTGTTTTCTCTGCTAGACTTCCG 120 Query 121 GAGGTTTGCCGACAGGTTCACGATAAGCAGCCGTTCGGAATGTTCAAAGGCGAAAATGGC 180 | |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GTGGTTTGTCGACAGATTCACGATAAGCAGCCGTTCGGAATGTTCAAAGGCGAAAATGGC 180 Query 181 ATGAACTACACATTTTCAACCTTTTTGATCGAAGCAATACTCATCATTTTCTTCATCAAA 240 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct 181 ATGAACTACACATTTTCAACATTTTTGATCGAAGCAATACTCATCATTTTGTTCATCAAA 240 Query 241 ATTGTTTACGTCCTCCTTCGACCTCTTCGCCAACCTCGTATAGTCTGCGAGATCATTGGT 300 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 241 ATTGTTTACTTCCTCCTTCGACCTCTTCGTCAACCTCGTATAGTCTGCGAGATCATTGGT 300 Query 301 GGGATGATGATAGGACCGTCCATG-TTAGGAAGAAACCGAAACTTCAATTACTATCTGTT 359 |||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| Sbjct 301 GGGATGATGATAGGACCGTCCATGCTT-GGAAGAAGCCGAAACTTCAATTACTATCTGTT 359 Query 360 TCCACCGATTGCGAATTACATATGCGCAAACATAGGACTGATGGGATTCTTTTACTTCTT 419 ||| || |||||||||||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct 360 TCCTCCAATTGCGAATTACATATGCGCGAACATAGGACTGTTGGGATTCTTTTATTTCTT 419 Query 420 CTTCCTCACGGCTGCCAAAACAGACGTTGCAGAAATCTTTAAAGCACCAAGAAAGCATAA 479 |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct 420 CTTCCTCACGGCTGCCAAGACGGACGTTGCAGAAATCTTTAAAGCACCAAGAAAGCATAA 479 Query 480 GTACATTGCTG-CAGTTAGCGTTTTGGTGCCGATTGCTTGCGTGGGGAGCACGGGAGCTG 538 ||||||||||| || |||||||||||||||||||||||||||||||| ||||||| |||| Sbjct 480 GTACATTGCTGCCA-TTAGCGTTTTGGTGCCGATTGCTTGCGTGGGGGGCACGGGGGCTG 538 Query 539 CCCTAAAACACAAAATGGATATAAGATTGCAGAAACCTTCGTCCATTGGAGGGGTCACGT 598 || | ||| | ||||||||| |||||||||||||| |||| ||||||||||||||||||| Sbjct 539 CCTTGAAAGAAAAAATGGATGTAAGATTGCAGAAATCTTCTTCCATTGGAGGGGTCACGT 598 Query 599 TCGCCTTGGGTTTCACTTCTTTTCCGGTCATTTACACTGTTTTGAGAGACATGAACCTTC 658 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 599 TCGCCTTGGGTTTCACTTCTTTTCCAGTCATTTACACTGTTTTGAGAGACATGAACCTTC 658 Query 659 TCAACTCTGAGATAGGAAAGTTCGCCATGTCAGTGACTCTCCTTGGAGACATGGTTGGGG 718 ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 659 TCAACTCCGAGATAGGAAAGTTCGCCATGTCAGTGACTCTCCTCGGAGACATGGTAGGGA 718 Query 719 TCTACGTGCTTGTTTTGTTTGAAGCCATGGCGCAGGCTGACGGAGGAGGAGGAGCATACT 778 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 719 TCTACGTGCTTGTTTTGTTTGAAGCCATGGCGCAGGCTGACGGTGGAGGAGGAGCATACT 778 Query 779 CTGTCATATGGTTTCTCATATCGGCGGCTATCATGGCCGCTTGTTTGCTTTTGGTTGTGA 838 ||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||| Sbjct 779 CTGTCATATGGTTTCTCATCTCATCGGCTATCTTGGCCGCTTTTTTGCTTTTGGTTGTGA 838 Query 839 AACGATCCTTTGA-ATGGATTGTCGCCAAAACGCCTGAGGGAGGACTCGTGAACCAAAAC 897 ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||| Sbjct 839 AACGAAGCTTTGAGA-GGATTGTCGCCAAAACGCCTGAGGGAGGACTCGTGAACCAAAAC 897 Query 898 TACATCGTCAAT-ATTCTCATGGGTGTCCTTGTCTCTTGTTTCCTCACTGACATGTTCGG 956 ||||| ||| || ||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 898 TACATTGTC-ATGATTCTCATGGGTGTCCTTGTCTCTTGTTTCCTCACCGACATGTTTGG 956 Query 957 TATGGCTATAGCTGTTGGACCCATTTGGCTGGGGTTGGTGGTCCCTCATGGACCACCGTT 1016 |||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 957 TATGGCTATAGCCGTTGGACCCATTTGGCTAGGGTTGGTGGTCCCTCATGGCCCACCGTT 1016 Query 1017 AGGTTCGACGTTGGCTATTAGGAGCGAGACCTTTGTTAATGAATTCTTGATGCCTTTCTC 1076 ||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct 1017 GGGTTCCACGTTGGCTATTCGGAGCGAGACCTTCGTTAATGAATTCTTGATGCCTTTCTC 1076 Query 1077 TTTTGCTTTGGTGGGACAAAAAACCAATGTCAACTTAATTAGCAAAGAGACGTGGCCCAA 1136 ||||||||| ||||||||||||||||||||||||||| ||||||| ||||| ||||| || Sbjct 1077 TTTTGCTTTAGTGGGACAAAAAACCAATGTCAACTTACTTAGCAATGAGACTTGGCCTAA 1136 Query 1137 ACAGATCTCTCCTCTTATCTACATGAGCATCGTTGGCTTCGTCACCAAGTTTGTCTCTTC 1196 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct 1137 ACAGGTCTCTCCTCTTGTCTACATGAGCATCGTTGGCTTCGTCACCAAGTTTGTCTCCTC 1196 Query 1197 CACTGGCGCTGCTCTCTTCTTTAAAGTCCCCACTAGGGACAGTCTCACGCTTGGCCTGAT 1256 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1197 CACTGGCGCTGCTCTCTTCTTTAAAGTCCCCACTAGGGACAGTCTCACGCTTGGCTTGAT 1256 Query 1257 GATGAACTTGAGAGGCCAGATCGATATCTTACTCTACTTGCATTGGATCGACAAACAAAT 1316 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct 1257 GATGAACCTGAGAGGCCAGATCGATATCTTGCTCTACTTGCATTGGATCGACAAACGTAT 1316 Query 1317 GGTAGGCTTACCCGGTTATTCTGTCATGGTTTTGTATGCGA-TCGTGGTCACGGGTGTAA 1375 ||||||||||||||||||| ||||||||||||||||||| | || ||||||||||||||| Sbjct 1317 GGTAGGCTTACCCGGTTATACTGTCATGGTTTTGTATGCCATTC-TGGTCACGGGTGTAA 1375 Query 1376 CAGCGCCGCTAATCAGCTTCCTCTACGATCCCACTCGGCCTTATAGAAGCAGCAAGCGCC 1435 |||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||| Sbjct 1376 CAGCGCCGCTCATCAGTTTCCTCTACGATCCCACTCGGCCTTACAGAAGCAGCAAGCGCC 1435 Query 1436 GCACAATCCAACACACTCCTCAGAACACCGAGACGGGACTAGTTCTTGCAGTAACCGACC 1495 |||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 1436 GCACAATCCAGCACACTCCTCAGAACACCGAGATGGGACTAGTTCTTGCAGTCTCCGACC 1495 Query 1496 ATGATACCTTCTCAGGCTTGATCACGTTTCTAGACTTCGCTTATCCCACTAAAACTAGTC 1555 ||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||||||| Sbjct 1496 ATGATACCTTCTCTGGCTTGATCACCTTTCTCGACTTCGCCTATCCCACTAAAACTAGTC 1555 Query 1556 CTTTCTCTGTATTCGCAATTCAGCTAGTGGAACTGGAAGGGCGTGCCCAACCCTTGTTTA 1615 |||| ||| |||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct 1556 CTTTTTCTATATTCGCAATCCAGCTTGTGGAACTGGAAGGGCGTGCCCAACCGTTGTTTA 1615 Query 1616 TTGCACACGACAA--G-AA-AA-G-GGAGGAAGAATAC---GAGGAAGAGGAAGAGCCTG 1666 ||| ||||||||| | || || | ||| ||||||||| ||||||||||||||||| | Sbjct 1616 TTGAACACGACAAGCGAAAGAAGGAGGATGAAGAATACGAGGAGGAAGAGGAAGAGCC-G 1674 Query 1667 CAGAGCGTAT--GG-GGAGCAGGCGAGTAGACCAAGTGCAGAGCGCATTTAAACTGTACC 1723 |||||||| || ||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct 1675 --GAGCGTATGCGGAGGAGCAGGCGAGTAGACCAGGTGCAGAGCGCCTTTAAACTGTACC 1732 Query 1724 AAGAGAAAAGAAGTGAGTGTGTGACGATGCATGCCTACACTG-CACATGCTTCAAAGCAT 1782 |||||||||||||||||||||||| ||||||||||||||| | || |||||||||||||| Sbjct 1733 AAGAGAAAAGAAGTGAGTGTGTGAAGATGCATGCCTACACCGCCA-ATGCTTCAAAGCAT 1791 Query 1783 AACATGTATCAAAATATTTGCGAGCTGGCTTTGACCAAGAAAACCGCTTTCATTCTCTTA 1842 ||||||||||| ||||||| | | |||| |||||||||||||||||||||||||||||| Sbjct 1792 CACATGTATCAAGATATTTGTGGGGTGGCCTTGACCAAGAAAACCGCTTTCATTCTCTTA 1851 Query 1843 CCTTATCAGAAAGAGCGTCTTCAAGACGCAGCTCTTACCGAGCTACGTGACTCCGGCATG 1902 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1852 CCTTATCAGAAAGAGCGTCTTCAAGACGCAGCTCTTACCGAGCTACGTGACTCCGGCATG 1911 Query 1903 CTATCTGTGAACGCAGACGTCTTGGCACACACACCATGTTCTGTCTGTATCTATTACGAG 1962 ||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||| Sbjct 1912 CTATCTGTGAACGCAGACGTCTTGGCACACACACCTTGCTCTGTCTGTATCTATTATGAG 1971 Query 1963 AAGGGACGACTTAAGAACGCTATGGTTAGGTCATCCATGGACCCACAACACACAACAAAT 2022 |||||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||||| Sbjct 1972 AAGGGACGACTTAAAAACGCCATGGTTCGGTCATCCATGGACCCGCAACACACAACAAAT 2031 Query 2023 TCTAGCCATATGAGGCAAGAAATGTACCGTTTCGTGGTTCTGTTTTTAGGAGGAGCTGAT 2082 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2032 TCAAGCCATATGAGGCAAGAAATGTACCGTTTCGTGGTTCTGTTTTTAGGAGGAGCTGAT 2091 Query 2083 AACAGAGAAGCTCTGCATCTGGCTGATAGGATGACGGAGAATCCGT-TCATAAACTTGAC 2141 ||||||||||||||||||||||||||||||||||||||||| |||| | |||| |||||| Sbjct 2092 AACAGAGAAGCTCTGCATCTGGCTGATAGGATGACGGAGAACCCGTAT-ATAACCTTGAC 2150 Query 2142 AGTGATTAGGTTCTTGGCGCACAACCACGAAGGAGAGGACGAGAGGGAGAAGAAGCTGGA 2201 ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 2151 AGTTATTAGGTTCTTGGCGCACAACCACGAAGGAGAGGATGAGAGGGAGAAGAAGCTAGA 2210 Query 2202 CGATGGGGTGGTGACGTGGTTCTGGGTCAAGAACGAAAGCAACGCTAGGGTTAGCTACAA 2261 |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 2211 CGATGGGGTGGTGACGTGGTTCTGGGTCAAGAACGAAAGCAACGAAAGGGTTAGTTACAA 2270 Query 2262 GGAGGTTGTTGTGAAGAACGGTGCTGAGACGTTGGCTGCGATTCAAGCAATGAATGTCAA 2321 |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 2271 GGAGGTTGTTGTCAAGAACGGTGCTGAGACATTGGCTGCGATTCAAGCAATGAATGTTAA 2330 Query 2322 TGACTATGATTTGTGGATAACCGGGAGGAGAGAAGGGATCAATCCAAAGATTCTGGAAGG 2381 |||||| ||| ||||||||||||||||||||||||||||||| |||||||||| |||||| Sbjct 2331 TGACTACGATCTGTGGATAACCGGGAGGAGAGAAGGGATCAACCCAAAGATTCAGGAAGG 2390 Query 2382 ACTTTCTACGTGGAGCGAAGACCACCAGCTTGGAGTCATTGGAGACACCGTGGCTGGGAG 2441 |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct 2391 ACTTTCTACGTGGAGCGAGGACCACCAGCTTGGAGTCATCGGAGACACAGTGGCTGGGAG 2450 Query 2442 CGTTTTCGCCTCGGAGGGTTCGGTGTTGGTGGTGCAGCAACAAGTGAGAAACCAGATGGG 2501 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 2451 CGTTTTCGCCTCGGATGGTTCGGTGTTGGTGGTGCAGCAACAAGTGAGGAACCAGAAGGG 2510 Query 2502 TGGTGATGGTTTCTTGAACGGCAAGTTTGATTACAAGAAATTAGTGTCTCCTTGGTCTCA 2561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2511 TGGTGATGGTTTCTTGAACGGCAAGTTTGATTACAAGAAATTAGTGTCTCCTTGGTCTCA 2570 Query 2562 CTCTCATAATTGA 2574 ||||||||||||| Sbjct 2571 CTCTCATAATTGA 2583 > Ahg330263 jgi|Araly1|330263|fgenesh1_pm.C_scaffold_7002490 Length=2586 Score = 2388 bits (1293), Expect = 0.0 Identities = 2202/2631 (84%), Gaps = 102/2631 (4%) Strand=Plus/Plus Query 1 ATGGTTAGGTC-TTT-CCCA--AGTGATGGCTGGAGTGCCCTGCCTACCCGTTTTGGGTT 56 ||||||||| | ||| |||| | ||| | | ||||| ||||||||||| ||||||||| Sbjct 1 ATGGTTAGG-CATTTCCCCATCAATGACGACCAGAGTGTCCTGCCTACCCATTTTGGGTT 59 Query 57 CTGGCCAGAG-AATCCAACCACCGCC-GGAGTGGTCAGC-AGTCGTGTTTTCTCAGCCAG 113 ||||| | | ||| |||||||| || |||| ||||| | |||||||| ||||| ||| Sbjct 60 TTGGCC-GGGTAATTCAACCACC-CCGGGAGAGGTCA-CTAGTCGTGTCTTCTCTCCCAA 116 Query 114 ACTTCCGGAGGTTTGCCGACAGGTTCACGA-TAAGCAGCCGTTCGGAATGTTCAAAGGCG 172 |||||||| ||| ||||| || |||| | |||||| ||||| |||||||||||||||| Sbjct 117 ACTTCCGGTGGTATGCCGGCAACTTCA-TAGTAAGCAACCGTTTGGAATGTTCAAAGGCG 175 Query 173 AAAATGGC-ATGAACTACACATTTTCAACCTTTTTGATCGAAGCAATAC-TCATCATTTT 230 ||||| || |||||||| ||||||| || ||||| ||||||||||| | |||||||||| Sbjct 176 AAAAT-GCGATGAACTATGCATTTTCGACTTTTTTAATCGAAGCAAT-CATCATCATTTT 233 Query 231 CTTCATCAAAATT-GTTTACG--TCCTCCTTCGACCTCTTCGCCAACCTCGTATAGTCTG 287 || |||| ||||| | ||| | || |||||||||||||||||||||||||||||||| | Sbjct 234 CTGCATC-AAATTCG-TTA-GTTTCGTCCTTCGACCTCTTCGCCAACCTCGTATAGTCAG 290 Query 288 CGAGATCATTGGTGGGATGATGATAGGACCGTCCATG-TTAGGAAGAAACCGAAACTTCA 346 ||||||||||||||| |||||||||||||| || ||| || ||| ||| |||||| |||| Sbjct 291 CGAGATCATTGGTGGAATGATGATAGGACCATCAATGCTT-GGAGGAAGCCGAAATTTCA 349 Query 347 ATTACTATCTGTTTCCACCGATTGCGAATTACATATGCGCAAACATAGGACTGATGGGAT 406 ||||||||||||| |||||||| ||||| ||||||||||||||||||||||| ||||||| Sbjct 350 ATTACTATCTGTTCCCACCGATCGCGAACTACATATGCGCAAACATAGGACTAATGGGAT 409 Query 407 TCTTTTACTTCTTCTTCCTCACGGCTGCCAAAACAGACGTTGCAGAAATCT-TTAAAGCA 465 |||| |||||| ||||||||||||| || || || || |||||| || | | |||| Sbjct 410 TCTTCTACTTCCTCTTCCTCACGGCCGCGAAGACGGATGTTGCATCCAT-TGGGAGAGCA 468 Query 466 CCAAGAAAGCATAAGTACATTGCTG-CAGTTAGCGTTTTGGTGCCGATTGCT-TGCGTGG 523 ||||||||||| ||||||||||||| || || | ||| | ||||| ||| | ||||| | Sbjct 469 CCAAGAAAGCACAAGTACATTGCTGCCA-TTGGTGTTATCGTGCCAATT-ATCTGCGT-G 525 Query 524 GGAGCACG-GGAGCT-GCCCTAAAACACAAAATGGATATAAGA-TTGCAGAAACCTTCGT 580 ||||| || || | | ||| | | | ||||||||| || | ||| |||| ||||||| Sbjct 526 GGAGC-CGTGGGGATGGCCATGCGAGATAAAATGGAT-GAAAACTTGAAGAAGCCTTCGT 583 Query 581 CCATTGGAGGGG-TCACGTTCGCCTTGGGTTTCACTTCTTTTCCGGTCATTTACACTGTT 639 ||||||| |||| ||| ||||||||||| |||||| ||||| || |||||||| ||||| Sbjct 584 CCATTGG-GGGGATCATGTTCGCCTTGGCTTTCACCTCTTTCCCTGTCATTTATTCTGTT 642 Query 640 TTGAGAGACATGAACCTTCTCAACTCTGAGATAGGAAAGTTCGCCATGTCAGTGACTCTC 699 |||||||||||||||||||| ||||| ||| | || |||||||||||||| ||| ||||| Sbjct 643 TTGAGAGACATGAACCTTCTTAACTCCGAGGTGGGCAAGTTCGCCATGTCGGTGGCTCTC 702 Query 700 CTTGGAGACATGGTTGGGGTCTACGTGCTTGTT-TTGTTTGAAGCCATGGCGCAGGCTGA 758 ||||||||||||| |||||||||||| ||||| || |||||||||||| |||||||||| Sbjct 703 CTTGGAGACATGGCAGGGGTCTACGTGATTGTTATT-TTTGAAGCCATGACGCAGGCTGA 761 Query 759 CGGAGGAGGAGGAGCATACTCTGTCATATGGTTTCTCA-TATCGGCGGCTA-TCATGGCC 816 ||||||||||| | || |||| | | |||||||| | |||||| || || || | || Sbjct 762 CGGAGGAGGAGCAT-ATGCTCTCTT-T-TGGTTTCT-AGTATCGGTGG-TAATCTTCGCG 816 Query 817 GCTTGTT-TGCTTTTGGTTGTGAAACGATCCTTTGAATGGATTGTCGCCAAAACGCCTGA 875 |||| || ||||||||||||| | |||| ||||||| |||||||| ||| |||||||||| Sbjct 817 GCTT-TTATGCTTTTGGTTGTTAGACGAGCCTTTGATTGGATTGTTGCCCAAACGCCTGA 875 Query 876 GGGAGGACTCGTGAACCAAAACTACATCGTCAAT-ATTCTCATGGGTGTCCTTGTCTCTT 934 ||| ||| ||||||||||||||||| |||| | ||||||||||||||||||| ||||| Sbjct 876 AGGAACACTTGTGAACCAAAACTACATTGTCA-TGATTCTCATGGGTGTCCTTGCCTCTT 934 Query 935 GTTTCCTCACTGACATGTTCGGTATGGCTATAGCTGTTGGACCCATTTGGCTGGGGTTGG 994 |||||||||| |||||||||||| | ||||||| || |||||||||||| | |||||| Sbjct 935 GTTTCCTCACCGACATGTTCGGTCTTTCTATAGCCGTAGGACCCATTTGGTTAGGGTTGC 994 Query 995 TGGTCCCTCATGGACCACCGTTAGGTTCGACGTTGGCTATTAGGAGCGAGACCTTTGT-T 1053 ||||||||||||| |||||||| ||||||||||||||| || ||||||||||||| | | Sbjct 995 TGGTCCCTCATGGCCCACCGTTGGGTTCGACGTTGGCTGTTCGGAGCGAGACCTTCATCT 1054 Query 1054 AATGAATTCTTGATGCCTTTCTCTTTTGCTTTGGTGGGACAAAAAACCAATGT-CAACTT 1112 | |||||| |||||||||||||||| |||||||||||||||| |||||| | || || Sbjct 1055 A-TGAATTTTTGATGCCTTTCTCTTATGCTTTGGTGGGACAAGGCACCAATATTCA-CT- 1111 Query 1113 AATT-AGCAAA-GAGACGTGGCCCAAACAGATCTCTCCTCT-TATCTACATGAGCATCGT 1169 | || || | | ||||| |||| | ||| |||||||||| | ||||||||| | |||| Sbjct 1112 ACTTTAG-AGATGAGACATGGCGTGATCAGCTCTCTCCTCTCT-TCTACATGACCCTCGT 1169 Query 1170 TGGCTTCGTCACCAAGTTTGTCTCTTCCACTGGCGCTGCTCTCTTCTTTAAAGTCCCCAC 1229 |||||| |||| |||||| ||||| || ||| | ||||||||||||| ||||||||| | Sbjct 1170 CGGCTTCTTCACTAAGTTTCTCTCTACCGCTGCCACTGCTCTCTTCTTCAAAGTCCCCGC 1229 Query 1230 TAGGGACAGTCTCACGCTTGGCCTGATGATGAACTTGAGAGGCCAGATCGATATCTTACT 1289 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| | Sbjct 1230 TAGGGACAGTCTCACGCTTGGGTTGATGATGAACTTGAGAGGCCAGATGGATATCTTGGT 1289 Query 1290 CTACTTGCATTGGATCGACAAACAAATGGTAGGCTTACCCGGTTATT-CTGTCATGGTTT 1348 |||||||||||||||||| |||| || || ||||| || |||| | |||||||||||| Sbjct 1290 CTACTTGCATTGGATCGATAAACGTATTGTGGGCTTTCCAGGTT-TCACTGTCATGGTTT 1348 Query 1349 TGTATGCGATCGTGGTCACGGGTGTAAC-AGCGCCGCTAATCAGCTTCCTCTACGATCCC 1407 || || || | || ||||||| ||| | | ||||||| |||||||| |||||||||||| Sbjct 1349 TGCATTCGGTTGTAGTCACGGCCGTATCGA-CGCCGCTCATCAGCTTTCTCTACGATCCC 1407 Query 1408 ACTCGGCCTTATAGAAGCAGCAAGCGCCGCACAATCCAACACACTCCTCAGAACACCGAG 1467 |||||||| || |||||||||| | |||||| ||||||||||||||||| ||||||||| Sbjct 1408 ACTCGGCCATACCGAAGCAGCAAACACCGCACCATCCAACACACTCCTCAAAACACCGAG 1467 Query 1468 ACGGGACTAGTTCTTGCAGTAACCGACCATGATACCTTCTCAGGCTTGATCACGTTTC-T 1526 | |||||| ||||||||||| || |||| || ||||| || |||||||| || |||| | Sbjct 1468 ATGGGACTGGTTCTTGCAGTCTCCAACCACGAAACCTTATCCGGCTTGATAAC-TTTCCT 1526 Query 1527 AGACTTCGCTTATCCCACTAAAACTAGTCCTTTCTCTGTATTCGCAATTCAGCTAGTGGA 1586 |||||||| ||||||||||||| |||||| || ||| |||||||| | ||||| ||||| Sbjct 1527 CGACTTCGCCTATCCCACTAAAAGTAGTCCCTTGTCTATATTCGCAGTCCAGCTTGTGGA 1586 Query 1587 ACTGGAAGGGCGTGCCCAAC-CC-TTGTTTATTGCAC-ACGA-CAA-GAAA--AGG-G-A 1637 ||| | |||| | ||| | | || |||||||||| || | || || ||| ||| | | Sbjct 1587 ACTAGCAGGGAGAGCC-A-CGCCGTTGTTTATTG-ACCATGAGCAGCGAAGGGAGGAGGA 1643 Query 1638 -G--GAAGAATACGAGGAAGAGGAAGA-G-CCTGCAGAGCGTATGGGG-A--GCAGGCGA 1689 | |||||||||||||| || ||||| | || | || |||| | | | ||||| Sbjct 1644 TGAAGAAGAATACGAGGAGGAAGAAGAAGACC--CTGACCGTACAACGCAAAGTGGGCGA 1701 Query 1690 GTAGACCAAGTGCAGAGCGCATTTAAACTGTACCAAGAGAAAAGA-AGTGAGTGTGTGA- 1747 |||||||||| |||||||| ||||| ||||||||||||||||| | ||||||||| | Sbjct 1702 ATAGACCAAGTCCAGAGCGCCTTTAAGTTGTACCAAGAGAAAAGAGA-TGAGTGTGT-AT 1759 Query 1748 CGATGCATGCCTACACTGCACATGCTTCAAAGCATAACATGTATCAAAATATTTGCGAGC 1807 || | | ||||||||| || |||||| |||| | | |||||| ||| | |||||||||| Sbjct 1760 CGCTTCGTGCCTACACCGCTCATGCTCCAAAACGTCTCATGTACCAAGACATTTGCGAGC 1819 Query 1808 TGGCTTTGACCAAGAAAA-CCGCTTTCATTCTCTTACCTTATCAGAAAGAGCGTCTTCAA 1866 |||| ||| | || |||| |||||||||||||||||||||||||||||||||||||| || Sbjct 1820 TGGCCTTGGCTAA-AAAAGCCGCTTTCATTCTCTTACCTTATCAGAAAGAGCGTCTTGAA 1878 Query 1867 GACGCAGCTCTTACCGAGCTACGTGACTCCGGCATGCTATCTGTGAACGCAGACGTCTTG 1926 ||||| || | ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1879 GACGCTGCCCCTACCGAGCTACGTGACTCCGGCATGCTATCTGTGAACGCAGACGTATTG 1938 Query 1927 GCACACACACCATGTTCTGTCTGTATCTA-TTACGAGAAGGGACGACTTAAGAACGCTAT 1985 | ||||||||| || ||||| |||||||| || || || ||||| ||||||||||| | Sbjct 1939 GAACACACACCTTGCTCTGTATGTATCTACTTT-GACAAAGGACGGCTTAAGAACGCGGT 1997 Query 1986 GGTTAGGTCATCCATGGACCCACAACACACAACAAATTCTAGCCATATGAGGCAAGAAAT 2045 |||| ||| ||||||||||| ||||||| ||||||| || |||| ||||| ||||||| Sbjct 1998 GGTTCGGTTATCCATGGACCTACAACACTCAACAAACTCAAGCCGTATGAAACAAGAAAC 2057 Query 2046 GTACCGTTTCGTGGTTCTGTTTTTAGGAGGAGCTGATAACAGAGAAGCTCTGCATCTGGC 2105 ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||| | || Sbjct 2058 ATACCGTTTCGTGGTTTTGTTTCTAGGAGGAGCTGATAACAGAGAAGCTCTACATTTAGC 2117 Query 2106 TGATAGGATGACGGAGAATCC-GTTCATAAACTTGACAGTGATTAGGTTCTTGGCGCACA 2164 ||||| ||| || | || || | | ||| |||||| ||||| | ||||||||| || Sbjct 2118 CGATAGAATGTCG-ACAAACCCGGACGTAACCTTGACGGTGATCCGATTCTTGGCGTTCA 2176 Query 2165 ACCACGAAGGAGAGGACGAGAGGGAGAAGAAGCTGGACGATGGGGTGGTGACGTGGTTCT 2224 |||||||||||||||| ||||| ||||||||||| ||||||||||| || |||||||| | Sbjct 2177 ACCACGAAGGAGAGGATGAGAGAGAGAAGAAGCTAGACGATGGGGTAGTCACGTGGTTTT 2236 Query 2225 GGGTCAAGAACGAAAGCAACGCTAGGGTTAGCTACAAGGAGGTTGTTGTGAAGAACGGTG 2284 |||||||||||||| | |||| ||||||||| ||||| |||||||| || || ||||||| Sbjct 2237 GGGTCAAGAACGAAGGAAACGATAGGGTTAGTTACAAAGAGGTTGTAGTTAAAAACGGTG 2296 Query 2285 CTGAGACGTTGGCTGCGATTCAAGCAATGAATGTCAATGACTATGATTTGTGGATAACCG 2344 ||||||| ||||||||||| ||||||||||||||||| ||||| ||| | |||||||||| Sbjct 2297 CTGAGACATTGGCTGCGATCCAAGCAATGAATGTCAACGACTACGATCTATGGATAACCG 2356 Query 2345 GGAGGAGAGAAGGGATCAATCCAAAGATTCTGGAAGGACTT-TCTACGTGGAGCGAAGAC 2403 | || |||||||||||||| ||||||||||| ||||| || || ||||||||||||||| Sbjct 2357 GAAGAAGAGAAGGGATCAACCCAAAGATTCTTGAAGGT-TTATCCACGTGGAGCGAAGAC 2415 Query 2404 CACCAGCTTGGAGTCATTGGAGACACCGTGGCTGGGAGCGTTTTCGCCTCGGAGGGTTCG 2463 ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| ||| Sbjct 2416 CACCAGCTTGGAGTCATCGGAGACACCGTGGCTGGAAGCGTTTTCGCCTCCGAGGGATCG 2475 Query 2464 GTGTTGGTGGTGCAGCAACAAGTGAGAAACCAGATGGGTGGTGATGGTTTCTTGAACGGC 2523 ||||||||||||||||||||||| || ||||| | |||||||||||||||||||| ||| Sbjct 2476 GTGTTGGTGGTGCAGCAACAAGTAAGGAACCAAAAAGGTGGTGATGGTTTCTTGAATGGC 2535 Query 2524 AAGTTTGATTACAAGAAATTAGTGTCTCCTTGGTCTCACTCTCATAATTGA 2574 |||||||||||||||| || | ||||||||||||||||||||||||||| Sbjct 2536 AAGTTTGATTACAAGAGTTTCTTATCTCCTTGGTCTCACTCTCATAATTGA 2586 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97053944260 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5