BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G58880.1 Length=3267 Score E Sequences producing significant alignments: (Bits) Value Ahg917622 jgi|Araly1|917622|Al_scaffold_0008_2373 3843 0.0 Ahg342640 jgi|Araly1|342640|fgenesh1_pg.C_scaffold_3002403 3843 0.0 > Ahg917622 jgi|Araly1|917622|Al_scaffold_0008_2373 Length=3228 Score = 3843 bits (2081), Expect = 0.0 Identities = 2553/2775 (92%), Gaps = 55/2775 (2%) Strand=Plus/Plus Query 1 ATGGGCATTGACACGAAAGAGATCATCGTTATATTATGGAAAATTCTTGGATATTCGATG 60 |||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 ATGGGCGTTGACGCGAAAGAGATCATCGTAATATTATGGAAAATTCTTGGATATTCGATG 60 Query 61 AACATGAGCATCAAATTCATGATAAACCACCCGGTTTTGTCAGGGGTTTCAATGTTTTTA 120 |||||||||||||||||||||| ||||||||| | |||||||||||||||||||||||| Sbjct 61 AACATGAGCATCAAATTCATGAGAAACCACCCAATATTGTCAGGGGTTTCAATGTTTTTA 120 Query 121 CTCGTGCTATACATTTTCCTCCCTTCTCTGTTCTTCTTCTTGATCTA-TACATCACCGGT 179 || ||||||||||||||||||||| |||| || ||||||||||| || | | |||||||| Sbjct 121 CTTGTGCTATACATTTTCCTCCCTACTCTCTTGTTCTTCTTGATTTACT-CGTCACCGGT 179 Query 180 TCTTGCATGTGCTCTAGTGTATGCCCGAGAAAAGCTAGGGTTAAGATTCTCAAGTTCGTA 239 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 180 TCTTGCATGTGCTCTAGTGTATGCACGAGAAAAGCTAGGATTAAGATTCTCAAGTTCGTA 239 Query 240 TTCAGAGCCAAAGAAGAGTTGTGGAGGAGAAAAGAGATGCCATTTAAAACAACAACGAAG 299 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 240 TTCAGAGCCAAAGAAGAGTTGTGGTGGAGAAAAGAGATGTCATTTAAAACAACAACGAAG 299 Query 300 TGTTAGACGAAATGCTCGAATGAAAGTTGAAGAATGGGATTCACAGACAAGCGAAGAAGA 359 ||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 300 TGTCCGACGAAATGCTCGAATGAAAGTTGAAGAATGGGATTCACAAACAAGCGAGGAAGA 359 Query 360 GAAAGACAAAGTTATCTTGACTTCTCTTTACAATGATCTCCTTGGTCGTACTCCTCAATT 419 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 360 GAAAGACAAAGTTATCTTGACTTCTCTTTACAATGACCTCCTTGGTCGTACTCCTCATTT 419 Query 420 CGAAGAGTCTCCAAAAGCTTTAGAAACCAATGTAGTAGAGGAAGAAGAAGACAAAGAGAA 479 ||| ||||||||||||||||||||||||||||||||||| | ||||||||||| ||||| Sbjct 420 CGAGGAGTCTCCAAAAGCTTTAGAAACCAATGTAGTAGA-G--GAAGAAGACAATGAGAA 476 Query 480 GGAGTTTCTTGGAGAGGGAGTTTCTCGTGATTTGGGTCATCTCAACGTTGAAGAACCAAT 539 ||||||||||||||||| || |||||||||||| ||||| || ||||||||||||||||| Sbjct 477 GGAGTTTCTTGGAGAGGAAGATTCTCGTGATTTAGGTCAACTTAACGTTGAAGAACCAAT 536 Query 540 GGTTTGCAACTGTGAGATCAAATATGGAGAATCAGATGGTAAAGTAGAGATGAAACAGGA 599 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct 537 GGTTTGCAACTGTGAGATCAAATATGGAGAATCAGATGGTAAAGAAGAGATGAAAGAGGA 596 Query 600 GATGAGTAATGCTAATGAGCATGGGATTTCAGAGATTGAGAGAAATAAGAGACTAGAG-T 658 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 597 GATGAGTAATGTTAATGAGCAGGGGATTTCAGAGATTGAGAGAAATAAGAGACTAGAGAG 656 Query 659 CTTTAATCGCTAGAAGAAGAGCGAGGAGACGCTTTAGACTAGCTTTAGATCAAAAGAATA 718 | ||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 657 C-TTAATAGCTAGAAGAAGAGCGAGGAGACTCTTTAGACTAGCTTTAGATCAAAGGAATA 715 Query 719 AGCTTCAAGCTGAAGAAACAACTAGCCCTAGACAGAACAACACCAACAACCTTCACGTTA 778 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 716 AGCTTCAAGCTGAAGAAACAACTAGCCCTAGACAGAACAACACCAACAGCCTTCACGTTA 775 Query 779 CGGTTTCGAGGAACTCACTTGAAAAACGTCGAAATAATTCATCAGATGGTACTACTGTTA 838 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 776 CGGTTTCGAGGAACTCACTTGAAAAACGTCGAAATAATTCATCAGATGGTACTACTGTTA 835 Query 839 AAGGATTACAGATTCCAGGCTCAGCTCCTTCTGTGATGTTACAAGGAAGAAACCCTTTTG 898 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 836 AAGGATTACCGATTCCAGGCTCAGCTCCTTCTGTGTTGTTACAAGGAAGAAACCCTTTTG 895 Query 899 ACATTCCTTATGATCCTCAAGAAGAAAGACCTAATCTTACTGGAGATAGCTTTGATCAAG 958 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 ACATACCTTATGATCCTCAAGAAGAAAGACCTAATCTTACTGGAGATAGCTTTGATCAAG 955 Query 959 AGTTTTCATTGTTTAATCAAAAAGATTTGTTCTTTTGTCGTCATGAGAGCTTCTGTCGTT 1018 | ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 956 AATTTTCATTGTTTAATCAGAAAGATATGTTCTTTTGTCGTCATGAGAGCTTCTGTCGTT 1015 Query 1019 TTTCTCTGTTCTCACCAGAACATGTTCAGTGTATGAACAGCCCAGTTTCTGCTTCAGACA 1078 || ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 1016 TTGCTCTGTTTTCACCAGAACATGCTCAATGTATGAACAGCCCAGTTTCTGCTTCAGACA 1075 Query 1079 TTTCAACTACTAGGAAACGTTTAGATTTGGAGAATGAATATATTGATCATACTGAACAAA 1138 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1076 TTTCAACTACTAGGAAACGTTTAGATTTGGACAATGAATATATGGATCATACTGAACAAA 1135 Query 1139 ATCTCCCAT-TAAATGGAAAAGAAGCTACAATAGAAGACGATGATAAAAGCGTTGTGAGT 1197 ||||||||| | |||||||| | |||||||||||||||||| |||||||||||||||||| Sbjct 1136 ATCTCCCATGT-AATGGAAAGGGAGCTACAATAGAAGACGACGATAAAAGCGTTGTGAGT 1194 Query 1198 CGAAAAAGCGAAGAAAAAGAGGTAGAAATGAATG---ATGAGACAGATTCAAACAAAGAA 1254 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 1195 GGAAAAAGCGAAGAAAGGGAGGTAGAAATGAATGATAATGAGACAGATTCAAACAAAGAA 1254 Query 1255 GAATGTGATGATTCAAGTTGTTCAGAAGAAAGTGAGTCAGAACT-ATGCCGTTTAAACAA 1313 |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 1255 GAATGTGATGATTCAAGTTGTTCAGAAGAAAGTGAGTCAGAACTCA-GCCGTTTAAACAA 1313 Query 1314 AGCGGAGCTCAGGGAAGCTATATGCCAATCCATGGACAACAATCCCGGTTATCTTGTGAA 1373 ||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 1314 AGCCGAGCTCAGGGAAGCTATATGCCAATCGATGGATAACAATCCCGGTTATCTTGTGAA 1373 Query 1374 TCAAGCAAGAAATAGTATTCCAAGCACATTACCTAGAGGTATAGTAGCGCCAAGACTAGA 1433 ||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| Sbjct 1374 CCAAACAAGAAATAGTATTCCAACCACATTGCCTAGAGGTTTAGTAGCGCCAAGACTAGA 1433 Query 1434 TGATAACAACATGTTTTACGCTCGCAAATGTGGAAATTCGCACAGTCGAACATTTTCAGT 1493 |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1434 TGATAACAACATGTTTTATGCTCGAAAATGCGGAAATTCGCACAGTCGAACATTTTCAGT 1493 Query 1494 TGCCTCGGATATGCAAGTTGAGGTTTCAGAGATTGGTTCACCTCCTACAACAGTTGATTG 1553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1494 TGCCTCGGATATGCAAGTTGAGGTTTCAGAGATTGGTTCACCTCCTACAACAGTTGATTG 1553 Query 1554 GCTTGATGACTGGTCTACTGGTGGTGAATCTTACATTTATGATACAGATATTGACAGAGA 1613 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct 1554 GCTTGATGACTGGTCTAATGGCGGTGAATCTTACATTTATGATACAGATATTGACAGAGA 1613 Query 1614 AATCGTCCGCGATGAAGAATCACGTAAGAGGATGTCTCATCAATATGAATCAAGAAGTGG 1673 ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 1614 AATCGTCCGCGATGAAGAATCACGTAAGAGGATCTCTCACCAATATGAATCAAGAAGTGG 1673 Query 1674 AATAGGATCAAAAGAGGAGAATAGTGAGCCAAGTACTAAACCTGAGGCCAAACCAGATCA 1733 ||||||||||||||||||||||| |||| || | ||||||||||||||||||||| |||| Sbjct 1674 AATAGGATCAAAAGAGGAGAATAATGAGACATGGACTAAACCTGAGGCCAAACCAAATCA 1733 Query 1734 GGATTGTGTGGTAGATGAAGACCTTATAACAGTTGATGAT-AT--GTCATTGTTAGATAG 1790 | ||||||||||||||||| |||||||||||||||||||| || |||||||||||| || Sbjct 1734 GAATTGTGTGGTAGATGAAAACCTTATAACAGTTGATGATGATTTGTCATTGTTAGAAAG 1793 Query 1791 AAGAACCCAAAGTGAAGAGATTTTTGAGCAGACACCTTCTAGTTCCAGTGATGTGTCCAA 1850 ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1794 AAGAAGCCAAACCGAAGAGATTTTTGAGCAGACACCTTCTAGTTCCAATGATGTGTCCAA 1853 Query 1851 GCCTACAAGTTCTGGGAGATTTGAAGGTATGTTGTTCCATACAAGTGCCTCATTGTCGTC 1910 ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 1854 GCCTACAAGCTCTGGGAAATTTGAAGGTATGTTGTTCCATACAAGTGCGTCATTGTCGTC 1913 Query 1911 TATAACAGAAGAACCTGAAACAATCTTGGATTCGATCGATGGCGTCAACTCGGAGATTAT 1970 |||||||||||| ||||||||||||||||| ||||||||||| | ||||||||||| | | Sbjct 1914 TATAACAGAAGAGCCTGAAACAATCTTGGACTCGATCGATGGGGGCAACTCGGAGAATCT 1973 Query 1971 GAATAGTTTGACTGGAGAA-TTAACTGACCAGAGACCTCTGACTAGTCTTGATTTATCCA 2029 ||||| |||||||| |||| ||| |||||| |||||||||||||| ||| |||| ||||| Sbjct 1974 GAATAATTTGACTGAAGAACTTA-CTGACCCGAGACCTCTGACTACTCTGGATTCATCCA 2032 Query 2030 TGGAGAATTTGATAGATGAAGAAGTTGCTGATATGCAACAAATAGAAAATGATGATCTTT 2089 || |||| ||||| ||||||||||| |||||| || ||||| |||||||||||||||||| Sbjct 2033 TGAAGAAATTGATTGATGAAGAAGTGGCTGATGTGAAACAAGTAGAAAATGATGATCTTT 2092 Query 2090 GTGGATCTCCTAAGATTATTGATTTTGATATCATTGATCATCAGCAGACAGATCAAACGT 2149 ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||| | Sbjct 2093 GTGGATCTCCTAAGATTATTGATTTAGATATCATTGATCATCAGCAGAAAGACCAAATG- 2151 Query 2150 CGGA-TAGCATTCAAGGAGAACATGAGGAAACTAAGAGCTTCTTGGATGCTTCTTTGGAC 2208 | || |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 2152 CTGAGTAGCATTCAAGGAGAACATGGGGAAACTAAGAGCTTTTTGGATGCTTCTTTGGAC 2211 Query 2209 ACACCCTTTATAGAATCATTTGAGAGAGAGGTACAAGAAGAAGAAGAATCAAACTTAGAC 2268 ||| ||| |||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct 2212 ACATCCTATATAGAATCATTTGAGAGAGAGTTAGAAGGAGAAGAAGAATCAAACTTAGAC 2271 Query 2269 AAGTCT-ACTGAGGAAACAACAAAAGAAACAGAAAGTGA--T---T-----TGA---AGA 2314 ||| || ||| |||||||||||||| ||||||||| ||| | | ||| ||| Sbjct 2272 AAG-CTTACTAAGGAAACAACAAAACAAACAGAAAATGAGGTACATCAAAGTGATTTAGA 2330 Query 2315 G--TTCTCCGGGACAAGTTTCT-ACAGAATTACTAGAAAGTGTGGTAAGGGAAGAGAATG 2371 | |||||| | |||||| || ||||||||||||| ||||| | | | ||||||||||| Sbjct 2331 GAGTTCTCCATGCCAAGTT-CTTACAGAATTACTAGTAAGTGAGATTATGGAAGAGAATG 2389 Query 2372 GTCAGGAATTAGTCAA-AAGTGCTGATGAGAAAGCAATG-CTAGTAGAGGAAGAGAAGAC 2429 |||||||||||| || ||| | |||||| ||| | | |||||| |||||||| || Sbjct 2390 GTCAGGAATTAG--AAGAAGA----A-GAGAAACCAAGGTC-AGTAGAAGAAGAGAAAAC 2441 Query 2430 TCATAATGTCTTGGAAGCATCTTCGAGCAATGCTCATACACAGTTGGTTGATTTAGACTA 2489 ||||||||| |||||| |||||||||| |||||||||||||||||||||| ||| || Sbjct 2442 TCATAATGTGGTGGAAGAATCTTCGAGCCATGCTCATACACAGTTGGTTGA---AGATTA 2498 Query 2490 TGGAAACGCAGAAAATTCTAGTGATGTGATACTTCTGCAAGTCCAAGATAGTCATAAGTC 2549 |||||||| ||||||| ||||||||||||||||||||||| | ||||||||| |||| || Sbjct 2499 TGGAAACGAAGAAAATGCTAGTGATGTGATACTTCTGCAATTTCAAGATAGTAATAACTC 2558 Query 2550 ACCACTAGATGAGTCAGTTGATCAGGAGATCTCTAAGGAAGTAGAAAAAACAGAGTTATT 2609 |||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| Sbjct 2559 ACCACTAGATGAGTCAACTGATCAGGAGGTCTCTAAGGAAGGAGAAAAAACAGAGTTATT 2618 Query 2610 AAAAGATTTTTGTGGTGAATCAACCCAAGAATACAAAAATAGAG-GAAATGTTGAGGCCT 2668 ||||||||| |||||||| | ||| |||||||||||||| ||| || ||||| || Sbjct 2619 GGAAGATTTTTACGGTGAATCTTCTGAAGTATACAAAAATAGAGCGAA-TGCTGAGGTCT 2677 Query 2669 GTGGAAACGCAGAAAATGCTAGTGATGTGTTACTTCTGCAAGTCCAAGATGGTAATAACT 2728 ||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||| Sbjct 2678 ATGGAAACGCAGAAAACGCTAGTGATGTGACATTTCTGCAAGTCCAAGATGGTAATTACT 2737 Query 2729 CACCACTAGATGAGT 2743 |||||| |||||||| Sbjct 2738 CACCACGAGATGAGT 2752 Score = 632 bits (342), Expect = 4e-180 Identities = 443/490 (90%), Gaps = 14/490 (3%) Strand=Plus/Plus Query 2782 GAGGTATTGAAAGATTT-TAATGATGAAACGCCCCAAGGATACAAAAATAGAGCCAATGT 2840 ||| ||||||||||||| | |||||||| || |||||| ||||||||||||||| ||||| Sbjct 2749 GAGTTATTGAAAGATTTCT-ATGATGAATCGTCCCAAGAATACAAAAATAGAGCTAATGT 2807 Query 2841 TGAGGAAGAATCAGTAGTTTTAGCTGACACTCAAAACTCACAAGATTCACAAACATGGAC 2900 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2808 TGAGGAAGAATCAGTAGTTTTAGCCAACACTCAAAACTCACAAGATTCACAAACATGGAC 2867 Query 2901 TCAACAGTGTGGTATAGATTCTTCCCAAGGGATATCACCAAGAACATTGGAGATCACCCA 2960 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2868 TCAACAGTGTGGTATAGATTCTTCCCAAGGGATATCACCAAGAACGTTGGAGATCACCCA 2927 Query 2961 GCAACTAGAGCAAGACGATGTTATTGCCTCTTCCTCAAACACCGTCTCTCAAGATATCAA 3020 ||||||||| ||||||||||||||| | | |||| || ||||||||| ||| | Sbjct 2928 ACAACTAGAGAAAGACGATGTTATTG----AT-C-CAAATGCCATCTCTCAAGTTATTGA 2981 Query 3021 TAAAGAT--ATTACCGCGGCAGTAGCCAATGACTTAGCTGCTAGTGAGAGGAATGATGAA 3078 || |||| ||| || ||||||| ||| ||| |||||||||||||||| ||||||||| Sbjct 2982 TACAGATGAATT--TGCTGCAGTAGGCAACGACGTAGCTGCTAGTGAGAGTAATGATGAA 3039 Query 3079 GTGATTCTGAAACTTGATGAGCAAGTTGGAGAAGCTATGGAAAAGGAACTAGAGCTTAAT 3138 | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 3040 GAAATTCTGAAACTTGATGAGCAAGATGGAGTAGCTATGGAAAAGGAACTAGAGCTTAAT 3099 Query 3139 TTAGAATCACTGCACCATAATATTGGTTTAGTCGGTAGAGAAGACGATGAAGAATCCAAG 3198 |||||||||||||| ||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct 3100 TTAGAATCACTGCATCATAACACTGGTTTAGTCGCTAGAGAAGACGATGAAGAATCCAAG 3159 Query 3199 AAAGTAATAGAGGAAATGCAAAATGC-GGAGATCCAAACAACAAAACACGAAAACAGAGT 3257 |||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||| Sbjct 3160 AAAGTAATAGAGGAAATGCAAAATGCAGG-GATCCAAACAACAAAAGACGAAAACAGAGT 3218 Query 3258 CTTAGGTTAG 3267 |||||||||| Sbjct 3219 CTTAGGTTAG 3228 Score = 209 bits (113), Expect = 9e-53 Identities = 155/176 (88%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 2670 TGGAAACGCAGAAAATGCTAGTGATGTGTTACTTCTGCAAGTCCAAGATGGTAATAACTC 2729 |||||||| ||||||||||||||||||| ||||||||||| | |||||| |||||||||| Sbjct 2499 TGGAAACGAAGAAAATGCTAGTGATGTGATACTTCTGCAATTTCAAGATAGTAATAACTC 2558 Query 2730 ACCACTAGATGAGTCAACTGATCAGGAGATTTCTAAGGAAGAAGAAAAAACAGAGGTATT 2789 |||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||| Sbjct 2559 ACCACTAGATGAGTCAACTGATCAGGAGGTCTCTAAGGAAGGAGAAAAAACAGAGTTATT 2618 Query 2790 GAAAGATTTTAATGATGAAACGCCCCAAGGATACAAAAATAGAGCCAATGTTGAGG 2845 | |||||||| | | |||| | | ||| ||||||||||||||| |||| ||||| Sbjct 2619 GGAAGATTTTTACGGTGAATCTTCTGAAGTATACAAAAATAGAGCGAATGCTGAGG 2674 > Ahg342640 jgi|Araly1|342640|fgenesh1_pg.C_scaffold_3002403 Length=3051 Score = 3843 bits (2081), Expect = 0.0 Identities = 2553/2775 (92%), Gaps = 55/2775 (2%) Strand=Plus/Plus Query 1 ATGGGCATTGACACGAAAGAGATCATCGTTATATTATGGAAAATTCTTGGATATTCGATG 60 |||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1 ATGGGCATTGCCGCGAAAGAGATCATCGTAATATTATGGAAAATTCTTGGATATTCGATG 60 Query 61 AACATGAGCATCAAATTCATGATAAACCACCCGGTTTTGTCAGGGGTTTCAATGTTTTTA 120 |||||||||||||||||||||| ||||||||| | |||||| ||||||||||||||||| Sbjct 61 AACATGAGCATCAAATTCATGAGAAACCACCCAATATTGTCAAGGGTTTCAATGTTTTTA 120 Query 121 CTCGTGCTATACATTTTCCTCCCTTCTCTGTTCTTCTTCTTGATCTA-TACATCACCGGT 179 || ||||||||||||||||||||| |||| || ||||||||||| || | | |||||||| Sbjct 121 CTTGTGCTATACATTTTCCTCCCTACTCTCTTGTTCTTCTTGATTTACT-CGTCACCGGT 179 Query 180 TCTTGCATGTGCTCTAGTGTATGCCCGAGAAAAGCTAGGGTTAAGATTCTCAAGTTCGTA 239 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 180 TCTTGCATGTGCTCTAGTGTATGCACGAGAAAAGCTAGGATTAAGATTCTCAAGTTCGTA 239 Query 240 TTCAGAGCCAAAGAAGAGTTGTGGAGGAGAAAAGAGATGCCATTTAAAACAACAACGAAG 299 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 240 TTCAGAGCCAAAGAAGAGTTGTGGTGGAGAAAAGAGATGTCATTTAAAACAACAACGAAG 299 Query 300 TGTTAGACGAAATGCTCGAATGAAAGTTGAAGAATGGGATTCACAGACAAGCGAAGAAGA 359 ||| |||||||||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 300 TGTCCGACGAAATGCTCGAATGAAAGTTGAAGAATGGGATTCACAAACAAGCGAGGAAGA 359 Query 360 GAAAGACAAAGTTATCTTGACTTCTCTTTACAATGATCTCCTTGGTCGTACTCCTCAATT 419 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct 360 GAAAGACAAAGTTATCTTGACTTCTCTTTACAATGACCTCCTTGGTCGTACTCCTCATTT 419 Query 420 CGAAGAGTCTCCAAAAGCTTTAGAAACCAATGTAGTAGAGGAAGAAGAAGACAAAGAGAA 479 ||| |||||||||||||||||||||||||||||||||||||||| | || |||| ||||| Sbjct 420 CGAGGAGTCTCCAAAAGCTTTAGAAACCAATGTAGTAGAGGAAG-A-AA-ACAATGAGAA 476 Query 480 GGAGTTTCTTGGAGAGGGAGTTTCTCGTGATTTGGGTCATCTCAACGTTGAAGAACCAAT 539 ||||||||||||||||| || |||||||||||| ||||| || ||||||||||||||||| Sbjct 477 GGAGTTTCTTGGAGAGGAAGATTCTCGTGATTTAGGTCAACTTAACGTTGAAGAACCAAT 536 Query 540 GGTTTGCAACTGTGAGATCAAATATGGAGAATCAGATGGTAAAGTAGAGATGAAACAGGA 599 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct 537 GGTTTGCAACTGTGAGATCAAATATGGAGAATCAGATGGTAAAGAAGAGATGAAAGAGGA 596 Query 600 GATGAGTAATGCTAATGAGCATGGGATTTCAGAGATTGAGAGAAATAAGAGACTAGAG-T 658 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 597 GATGAGTAATGTTAATGAGCAGGGGATTTCAGAGATTGAGAGAAATAAGAGACTAGAGAG 656 Query 659 CTTTAATCGCTAGAAGAAGAGCGAGGAGACGCTTTAGACTAGCTTTAGATCAAAAGAATA 718 | ||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 657 C-TTAATAGCTAGAAGAAGAGCGAGGAGACTCTTTAGACTAGCTTTAGATCAAAGGAATA 715 Query 719 AGCTTCAAGCTGAAGAAACAACTAGCCCTAGACAGAACAACACCAACAACCTTCACGTTA 778 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 716 AGCTTCAAGCTGAAGAAACAACTAGCCCTAGACAGAACAACACCAACAGCCTTCACGTTA 775 Query 779 CGGTTTCGAGGAACTCACTTGAAAAACGTCGAAATAATTCATCAGATGGTACTACTGTTA 838 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 776 CGGTTTCGAGGAACTCACTTGAAAAACGTCGAAATAATTCATCAGATGGTACTACTGTTA 835 Query 839 AAGGATTACAGATTCCAGGCTCAGCTCCTTCTGTGATGTTACAAGGAAGAAACCCTTTTG 898 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 836 AAGGATTACCGATTCCAGGCTCAGCTCCTTCTGTGTTGTTACAAGGAAGAAACCCTTTTG 895 Query 899 ACATTCCTTATGATCCTCAAGAAGAAAGACCTAATCTTACTGGAGATAGCTTTGATCAAG 958 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 896 ACATACCTTATGATCCTCAAGAAGAAAGACCTAATCTTACTGGAGATAGCTTTGATCAAG 955 Query 959 AGTTTTCATTGTTTAATCAAAAAGATTTGTTCTTTTGTCGTCATGAGAGCTTCTGTCGTT 1018 | ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 956 AATTTTCATTGTTTAATCAGAAAGATATGTTCTTTTGTCGTCATGAGAGCTTCTGTCGTT 1015 Query 1019 TTTCTCTGTTCTCACCAGAACATGTTCAGTGTATGAACAGCCCAGTTTCTGCTTCAGACA 1078 || ||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 1016 TTGCTCTGTTTTCACCAGAACATGCTCAATGTATGAACAGCCCAGTTTCTGCTTCAGACA 1075 Query 1079 TTTCAACTACTAGGAAACGTTTAGATTTGGAGAATGAATATATTGATCATACTGAACAAA 1138 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1076 TTTCAACTACTAGGAAACGTTTAGATTTGGACAATGAATATATGGATCATACTGAACAAA 1135 Query 1139 ATCTCCCAT-TAAATGGAAAAGAAGCTACAATAGAAGACGATGATAAAAGCGTTGTGAGT 1197 ||||||||| | |||||||| | |||||||||||||||||| |||||||||||||||||| Sbjct 1136 ATCTCCCATGT-AATGGAAAGGGAGCTACAATAGAAGACGACGATAAAAGCGTTGTGAGT 1194 Query 1198 CGAAAAAGCGAAGAAAAAGAGGTAGAAATGAATG---ATGAGACAGATTCAAACAAAGAA 1254 ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| Sbjct 1195 GGAAAAAGCGAAGAAAGGGAGGTAGAAATGAATGATAATGAGACAGATTCAAACAAAGAA 1254 Query 1255 GAATGTGATGATTCAAGTTGTTCAGAAGAAAGTGAGTCAGAACT-ATGCCGTTTAAACAA 1313 |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct 1255 GAATGTGATGATTCAAGTTGTTCAGAAGAAAGTGAGTCAGAACTCA-GCCGTTTAAACAA 1313 Query 1314 AGCGGAGCTCAGGGAAGCTATATGCCAATCCATGGACAACAATCCCGGTTATCTTGTGAA 1373 ||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct 1314 AGCCGAGCTCAGGGAAGCTATATGCCAATCGATGGATAACAATCCCGGTTATCTTGTGAA 1373 Query 1374 TCAAGCAAGAAATAGTATTCCAAGCACATTACCTAGAGGTATAGTAGCGCCAAGACTAGA 1433 ||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| Sbjct 1374 CCAAACAAGAAATAGTATTCCAACCACATTGCCTAGAGGTTTAGTAGCGCCAAGACTAGA 1433 Query 1434 TGATAACAACATGTTTTACGCTCGCAAATGTGGAAATTCGCACAGTCGAACATTTTCAGT 1493 |||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||| Sbjct 1434 TGATAACAACATGTTTTATGCTCGAAAATGCGGAAATTCGCACAGTCGAACATTTTCAGT 1493 Query 1494 TGCCTCGGATATGCAAGTTGAGGTTTCAGAGATTGGTTCACCTCCTACAACAGTTGATTG 1553 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1494 TGCCTCGGATATGCAAGTTGAGGTTTCAGAGATTGGTTCACCTCCTACAACAGTTGATTG 1553 Query 1554 GCTTGATGACTGGTCTACTGGTGGTGAATCTTACATTTATGATACAGATATTGACAGAGA 1613 ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| Sbjct 1554 GCTTGATGACTGGTCTAATGGCGGTGAATCTTACATTTATGATACAGATATTGACAGAGA 1613 Query 1614 AATCGTCCGCGATGAAGAATCACGTAAGAGGATGTCTCATCAATATGAATCAAGAAGTGG 1673 ||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct 1614 AATCGTCCGCGATGAAGAATCACGTAAGAGGATCTCTCACCAGTATGAATCAAGAAGTGG 1673 Query 1674 AATAGGATCAAAAGAGGAGAATAGTGAGCCAAGTACTAAACCTGAGGCCAAACCAGATCA 1733 ||||||||||||||||||||||| |||| || | ||||||||||||||||||||| |||| Sbjct 1674 AATAGGATCAAAAGAGGAGAATAATGAGACATGGACTAAACCTGAGGCCAAACCAAATCA 1733 Query 1734 GGATTGTGTGGTAGATGAAGACCTTATAACAGTTGATGAT-AT--GTCATTGTTAGATAG 1790 | ||||||||||||||||| |||||||||||||||||||| || |||||||||||| || Sbjct 1734 GAATTGTGTGGTAGATGAAAACCTTATAACAGTTGATGATGATTTGTCATTGTTAGAAAG 1793 Query 1791 AAGAACCCAAAGTGAAGAGATTTTTGAGCAGACACCTTCTAGTTCCAGTGATGTGTCCAA 1850 ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1794 AAGAAGCCAAACCGAAGAGATTTTTGAGCAGACACCTTCTAGTTCCAATGATGTGTCCAA 1853 Query 1851 GCCTACAAGTTCTGGGAGATTTGAAGGTATGTTGTTCCATACAAGTGCCTCATTGTCGTC 1910 ||||||||| ||||||| |||||||||||||||||||||||||||||| ||||||||||| Sbjct 1854 GCCTACAAGCTCTGGGAAATTTGAAGGTATGTTGTTCCATACAAGTGCGTCATTGTCGTC 1913 Query 1911 TATAACAGAAGAACCTGAAACAATCTTGGATTCGATCGATGGCGTCAACTCGGAGATTAT 1970 |||||||||||| ||||||||||||||||| ||||||||||| | ||||||||||| | | Sbjct 1914 TATAACAGAAGAGCCTGAAACAATCTTGGACTCGATCGATGGGGGCAACTCGGAGAATCT 1973 Query 1971 GAATAGTTTGACTGGAGAA-TTAACTGACCAGAGACCTCTGACTAGTCTTGATTTATCCA 2029 ||||| |||||||| |||| ||| ||||||||||||||||||||| ||| |||| ||||| Sbjct 1974 GAATAATTTGACTGAAGAACTTA-CTGACCAGAGACCTCTGACTACTCTGGATTCATCCA 2032 Query 2030 TGGAGAATTTGATAGATGAAGAAGTTGCTGATATGCAACAAATAGAAAATGATGATCTTT 2089 || |||| ||||| ||||||||||| |||||| || ||||| |||||||||||||||||| Sbjct 2033 TGAAGAAATTGATTGATGAAGAAGTGGCTGATGTGAAACAAGTAGAAAATGATGATCTTT 2092 Query 2090 GTGGATCTCCTAAGATTATTGATTTTGATATCATTGATCATCAGCAGACAGATCAAACGT 2149 ||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||| | Sbjct 2093 GTGGATCTCCTAAGATTATTGATTTAGATATCATTGATCATCAGCAGAAAGACCAAATG- 2151 Query 2150 CGGA-TAGCATTCAAGGAGAACATGAGGAAACTAAGAGCTTCTTGGATGCTTCTTTGGAC 2208 | || |||||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 2152 CTGAGTAGCATTCAAGGAGAACATGGGGAAACTAAGAGCTTTTTGGATGCTTCTTTGGAC 2211 Query 2209 ACACCCTTTATAGAATCATTTGAGAGAGAGGTACAAGAAGAAGAAGAATCAAACTTAGAC 2268 ||| ||| |||||||||||||||||||||| || ||| |||||||||||||||||||||| Sbjct 2212 ACATCCTATATAGAATCATTTGAGAGAGAGTTAGAAGGAGAAGAAGAATCAAACTTAGAC 2271 Query 2269 AAGTCT-ACTGAGGAAACAACAAAAGAAACAGAAAGTGA--T---T-----TGA---AGA 2314 ||| || ||| |||||||||||||| ||||||||| ||| | | ||| ||| Sbjct 2272 AAG-CTTACTAAGGAAACAACAAAACAAACAGAAAATGAGGTACATCAAAGTGATTTAGA 2330 Query 2315 G--TTCTCCGGGACAAGTTTCT-ACAGAATTACTAGAAAGTGTGGTAAGGGAAGAGAATG 2371 | |||||| | |||||| || ||||||||||||| ||||| | | | ||||||||||| Sbjct 2331 GAGTTCTCCATGCCAAGTT-CTTACAGAATTACTAGTAAGTGAGATTATGGAAGAGAATG 2389 Query 2372 GTCAGGAATTAGTCAA-AAGTGCTGATGAGAAAGCAATG-CTAGTAGAGGAAGAGAAGAC 2429 |||||||||||| || ||| | |||||| ||| | | |||||| |||||||| || Sbjct 2390 GTCAGGAATTAG--AAGAAGA----A-GAGAAACCAAGGTC-AGTAGAAGAAGAGAAAAC 2441 Query 2430 TCATAATGTCTTGGAAGCATCTTCGAGCAATGCTCATACACAGTTGGTTGATTTAGACTA 2489 ||||||||| |||||| |||||||||| |||||||||||||||||||||| ||| || Sbjct 2442 TCATAATGTGGTGGAAGAATCTTCGAGCCATGCTCATACACAGTTGGTTGA---AGATTA 2498 Query 2490 TGGAAACGCAGAAAATTCTAGTGATGTGATACTTCTGCAAGTCCAAGATAGTCATAAGTC 2549 |||||||| ||||||| ||||||||||||||||||||||||| ||||||||| |||| || Sbjct 2499 TGGAAACGAAGAAAATGCTAGTGATGTGATACTTCTGCAAGTTCAAGATAGTAATAACTC 2558 Query 2550 ACCACTAGATGAGTCAGTTGATCAGGAGATCTCTAAGGAAGTAGAAAAAACAGAGTTATT 2609 |||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| Sbjct 2559 ACCACTAGATGAGTCAACTGATCAGGAGGTCTCTAAGGAAGGAGAAAAAACAGAGTTATT 2618 Query 2610 AAAAGATTTTTGTGGTGAATCAACCCAAGAATACAAAAATAGAG-GAAATGTTGAGGCCT 2668 ||||||||| |||||||| | ||| |||||||||||||| ||| || ||||| || Sbjct 2619 GGAAGATTTTTACGGTGAATCTTCTGAAGTATACAAAAATAGAGCGAA-TGCTGAGGTCT 2677 Query 2669 GTGGAAACGCAGAAAATGCTAGTGATGTGTTACTTCTGCAAGTCCAAGATGGTAATAACT 2728 ||||||||||||||| |||||||||||| | ||||||||||||||||||||||| ||| Sbjct 2678 ATGGAAACGCAGAAAACGCTAGTGATGTGACATTTCTGCAAGTCCAAGATGGTAATTACT 2737 Query 2729 CACCACTAGATGAGT 2743 |||||| |||||||| Sbjct 2738 CACCACGAGATGAGT 2752 Score = 327 bits (177), Expect = 2e-88 Identities = 251/285 (88%), Gaps = 12/285 (4%) Strand=Plus/Plus Query 2782 GAGGTATTGAAAGATTT-TAATGATGAAACGCCCCAAGGATACAAAAATAGAGCCAATGT 2840 ||| ||||||||||||| | |||||||| || |||||| ||||||||||||||| ||||| Sbjct 2749 GAGTTATTGAAAGATTTCT-ATGATGAATCGTCCCAAGAATACAAAAATAGAGCTAATGT 2807 Query 2841 TGAGGAAGAATCAGTAGTTTTAGCTGACACTCAAAACTCACAAGATTCACAAACATGGAC 2900 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 2808 TGAGGAAGAATCAGTAGTTTTAGCCAACACTCAAAACTCACAAGATTCACAAACATGGAC 2867 Query 2901 TCAACAGTGTGGTATAGATTCTTCCCAAGGGATATCACCAAGAACATTGGAGATCACCCA 2960 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 2868 TCAACAGTGTGGTATAGATTCTTCCCAAGGGATATCACCAAGAACGTTGGAGATCACCCA 2927 Query 2961 GCAACTAGAGCAAGACGATGTTATTGCCTCTTCCTCAAACACCGTCTCTCAAGATATCAA 3020 ||||||||| ||||||||||||||| || | ||| || ||||||||| ||| | Sbjct 2928 ACAACTAGAGAAAGACGATGTTATTGA-TC--C---AAATGCCATCTCTCAAGTTATTGA 2981 Query 3021 TAAAGAT-A-TTACCGCGGCAGTAGCCAATGACTTAGCTGCTAGT 3063 || |||| | || || ||||||||||| ||| ||||||||||| Sbjct 2982 TACAGATGAATTT--GCTGCAGTAGCCAACGACGTAGCTGCTAGT 3024 Score = 215 bits (116), Expect = 2e-54 Identities = 156/176 (89%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 2670 TGGAAACGCAGAAAATGCTAGTGATGTGTTACTTCTGCAAGTCCAAGATGGTAATAACTC 2729 |||||||| ||||||||||||||||||| ||||||||||||| |||||| |||||||||| Sbjct 2499 TGGAAACGAAGAAAATGCTAGTGATGTGATACTTCTGCAAGTTCAAGATAGTAATAACTC 2558 Query 2730 ACCACTAGATGAGTCAACTGATCAGGAGATTTCTAAGGAAGAAGAAAAAACAGAGGTATT 2789 |||||||||||||||||||||||||||| | |||||||||| ||||||||||||| |||| Sbjct 2559 ACCACTAGATGAGTCAACTGATCAGGAGGTCTCTAAGGAAGGAGAAAAAACAGAGTTATT 2618 Query 2790 GAAAGATTTTAATGATGAAACGCCCCAAGGATACAAAAATAGAGCCAATGTTGAGG 2845 | |||||||| | | |||| | | ||| ||||||||||||||| |||| ||||| Sbjct 2619 GGAAGATTTTTACGGTGAATCTTCTGAAGTATACAAAAATAGAGCGAATGCTGAGG 2674 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 123306536520 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5