BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G59170.1 Length=1135 Score E Sequences producing significant alignments: (Bits) Value Ahg952254 jgi|Araly1|952254|scaffold_4800010.1 331 6e-90 Ahg917651 jgi|Araly1|917651|Al_scaffold_0008_2402 318 5e-86 Ahg917652 jgi|Araly1|917652|Al_scaffold_0008_2403 174 1e-42 > Ahg952254 jgi|Araly1|952254|scaffold_4800010.1 Length=838 Score = 331 bits (179), Expect = 6e-90 Identities = 253/288 (88%), Gaps = 7/288 (2%) Strand=Plus/Plus Query 627 GAAGTATCCTCCGCCAGAACAGTATCCACCGCCGATCAAGAAGTATCCTCCGCC-AATTA 685 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | || Sbjct 512 GAAGTATCCTCCCCCAGAACAGTATCCACCGCCGATCAAGAAGTATCCACCGCCGACTT- 570 Query 686 AGAAGT-ATCCTCCGCCAGAAGAGTATCCACCACCGATCAAGACTTATCCTCATCCCCCT 744 | | |||| ||| | | |||||||||| |||||||||||||| |||||||| || Sbjct 571 A-CCCTCATCCACCG-GTG-A-AGTATCCACCGCCGATCAAGACTTACCCTCATCCGCCG 626 Query 745 GTGAAGTATCCACCGCCTCCGTACAAGACTTACCCTCATCCGCCGATCAAAACTTATCCT 804 |||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| Sbjct 627 GTGAAGTATCCACCACCTCCGTACAAGACTTACCCTCATCCGCCGATCAAGACGTATCCT 686 Query 805 CCTCCGAAAGAATGTCCTCCTCCGCCTGAACATTACCCTTGGCCTCCGAAAAAGAAATAT 864 |||||||| ||||||||||||||||| | ||||||||||| || |||| ||||||||| Sbjct 687 CCTCCGAAGGAATGTCCTCCTCCGCCGGTACATTACCCTTTTCCCCCGATCAAGAAATAT 746 Query 865 CCTCCACCGGTTGAGTATCCGTCGCCGCCATATAAGAAATATCCTCCG 912 ||||||||||||| |||||||||||| ||||||||||| ||||| ||| Sbjct 747 CCTCCACCGGTTGTGTATCCGTCGCCACCATATAAGAAGTATCCACCG 794 Score = 315 bits (170), Expect = 6e-85 Identities = 220/243 (91%), Gaps = 7/243 (3%) Strand=Plus/Plus Query 51 AAGAAAAATGAAGTCTTGTCTAGCTACTTTTGCTCTCGCAGTGTTAGTAACACAAGGAAG 110 ||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||| Sbjct 14 AAGAAAAATGAAGTCTTTTGTAGCTACTTTTGCTCTCGCAGTGTTGGTAACACAAGGAAG 73 Query 111 CATTTTTAGTTTGTGTTTGGCCTCCTCTGCTTCTACAAACTC-TGTTCCTAATTGGTTTC 169 |||||||||||||||||||||||| ||| ||||||||||||| | ||| ||||||||||| Sbjct 74 CATTTTTAGTTTGTGTTTGGCCTCTTCTTCTTCTACAAACTCCTTTTC-TAATTGGTTTC 132 Query 170 ATCATTGGCCGCCGTTTAAATGGGGACCAAAATTTCCATATTCTCCACCTAAACCGCCGC 229 ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| Sbjct 133 ATCATTGGCCGCCGTTTAAATGGCGACCAAAATTTCCATATTCTCCACCTACACCTCCGC 192 Query 230 CAATCGA-GAAATATCCTCCACCGGTGCAGTATCCACCACCGATCAAGAAGTATCCACCG 288 ||| | | | ||||||||||| | || |||||||| ||||||||||||||||| ||| Sbjct 193 CAA-CTACG---TATCCTCCACCAGAACAATATCCACCGCCGATCAAGAAGTATCCTCCG 248 Query 289 CCA 291 ||| Sbjct 249 CCA 251 Score = 185 bits (100), Expect = 5e-46 Identities = 197/241 (82%), Gaps = 18/241 (7%) Strand=Plus/Plus Query 552 GTATCCTCCGCAAGAACAGTATCCACCACCGATTAAAAAGTATCCTCCGCCAGAA-AAGT 610 ||||||||| | |||||| |||||||| ||||| || |||||||||||||||||| || | Sbjct 200 GTATCCTCCACCAGAACAATATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAA-T 258 Query 611 ATCCACCCCCGATCAAGAAGTATCCTCCGCCAGAACAGTATCCACCGCCGATCAAGAAGT 670 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 259 ATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAATATCCACCGCCGATCAAGAAGT 318 Query 671 ATCCTCCG-C-CAATTAAGAAGTATCCTCCGCCAGAAGAGTATCCACCACCGATCAAGAC 728 | || ||| | | | | || | | | | | || | | ||||| |||||||| || Sbjct 319 ACCCACCGTCGCCGT-ACGA-G-A-CTTAC-CCTCA----T--CCACCGCCGATCAAAAC 367 Query 729 TTATCCTCATCCCCCTGTGAAGTATCCACCGCCTCCGTACAAGACTTACCCTCATCCGCC 788 ||| |||||||| || ||||||||||| ||||| | ||| ||||||||||||||||| Sbjct 368 TTACCCTCATCCGCCGGTGAAGTATCCTCCGCCGA--T-CAAAACTTACCCTCATCCGCC 424 Query 789 G 789 | Sbjct 425 G 425 Score = 174 bits (94), Expect = 1e-42 Identities = 116/127 (91%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 435 GTATCCTCCACCAGAACAGTATTCACCGCCTTTCAAGAAGTATCCTCCGCCAGAACAGTA 494 |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||| || Sbjct 200 GTATCCTCCACCAGAACAATATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAATA 259 Query 495 TCCACCACCGATCAAGAAGTATCCTCCGCCAGAACATTATCCACCGCCGATAAAAAAGTA 554 |||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct 260 TCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAATATCCACCGCCGATCAAGAAGTA 319 Query 555 TCCTCCG 561 || ||| Sbjct 320 CCCACCG 326 Score = 169 bits (91), Expect = 5e-41 Identities = 255/329 (78%), Gaps = 32/329 (10%) Strand=Plus/Plus Query 474 GTATCCTCCGCCAGAACAGTATCCACCACCGATCAAGAAGTATCCTCCGCCAGAACATTA 533 ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct 200 GTATCCTCCACCAGAACAATATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAATA 259 Query 534 TCCACCGCCGATAAAAAAGTATCCTCCGCAAGAACAGTATCCACCACCGATTAAAAAGTA 593 |||||||||||| || ||||||||||||| |||||| |||||||| ||||| || ||||| Sbjct 260 TCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAATATCCACCGCCGATCAAGAAGTA 319 Query 594 TCCTCCG-C-CAGAAA-AGTA-TCCACCCCCGATCAAGAAGTATCCTCCGC-CAGAACAG 648 || ||| | | | | || | | |||| | ||| | || ||| || ||| Sbjct 320 CCCACCGTCGCCGTACGAG-ACTT-ACCCTC-ATCCA-------CCGCCGATCAAAACT- 368 Query 649 TATCC--A-CCGCCGATCAAGAAGTATCCTCCGCCAATTAAGAAGT-ATCCTC--C-GCC 701 || || | |||||| | ||||||||||||||| || || || | | |||| | ||| Sbjct 369 TACCCTCATCCGCCGGT---GAAGTATCCTCCGCCGATCAA-AACTTACCCTCATCCGCC 424 Query 702 AGAAGA-GTATCCACCACCGATCAAGACTTATCCTCATCCCCCTGTGAAGTATCCACCGC 760 | || |||||| || |||||||| ||||| |||||||| || ||||| ||||| |||| Sbjct 425 GGT-GAAGTATCCTCCGCCGATCAAAACTTACCCTCATCCGCCGGTGAAATATCCTCCGC 483 Query 761 CTCCGTACAAGACTTACCCTCATCCGCCG 789 | | ||| |||||||||||||||||| Sbjct 484 CGA--T-CAAAACTTACCCTCATCCGCCG 509 Score = 167 bits (90), Expect = 2e-40 Identities = 119/133 (89%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 237 GAAATATCCTCCACCGGTGCAGTATCCACCACCGATCAAGAAGTATCCACCGCC-ACCAT 295 ||| |||||||| || | ||||||||||| ||||||||||||||||||||||| | | | Sbjct 512 GAAGTATCCTCCCCCAGAACAGTATCCACCGCCGATCAAGAAGTATCCACCGCCGA-CTT 570 Query 296 ACGAGCATCCACCGGTGAAGTATCCACCACCGATCAAGACTTACCCTCATCCGCCGGTGA 355 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 571 ACCCTCATCCACCGGTGAAGTATCCACCGCCGATCAAGACTTACCCTCATCCGCCGGTGA 630 Query 356 AGTATCCTCCACC 368 ||||||| ||||| Sbjct 631 AGTATCCACCACC 643 Score = 148 bits (80), Expect = 7e-35 Identities = 94/101 (93%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 301 CATCCACCGGTGAAGTATCCACCACCGATCAAGACTTACCCTCATCCGCCGGTGAAGTAT 360 ||||| |||||||| ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct 459 CATCCGCCGGTGAAATATCCTCCGCCGATCAAAACTTACCCTCATCCGCCGGTGAAGTAT 518 Query 361 CCTCCACCAGAACAGTATCCACCGCCGATTAAGAAGTATCC 401 ||||| ||||||||||||||||||||||| ||||||||||| Sbjct 519 CCTCCCCCAGAACAGTATCCACCGCCGATCAAGAAGTATCC 559 Score = 147 bits (79), Expect = 2e-34 Identities = 134/158 (85%), Gaps = 13/158 (8%) Strand=Plus/Plus Query 591 GTATCCTCCGCCAGAA-AAGTATCCACCCCCGATCAAGAAGTATCCTCCGCCAGAACAGT 649 ||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||| | Sbjct 200 GTATCCTCCACCAGAACAA-TATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAAT 258 Query 650 ATCCACCGCCGATCAAGAAGTATCCTCCGCCAATTAAGAAGTATCCTCCGCC-AG-AAGA 707 |||||||||||||||||||||||||||||||| || || ||||| ||||| | |||| Sbjct 259 ATCCACCGCCGATCAAGAAGTATCCTCCGCCAG--AACAA-TATCCACCGCCGATCAAGA 315 Query 708 -GTATCCACCA-C-C-G-ATCAAGACTTATCCTCATCC 740 ||| ||||| | | | | | ||||||| |||||||| Sbjct 316 AGTACCCACCGTCGCCGTA-CGAGACTTACCCTCATCC 352 Score = 134 bits (72), Expect = 2e-30 Identities = 242/318 (76%), Gaps = 35/318 (11%) Strand=Plus/Plus Query 226 CCGCCAATCGAGAAATATCCTCCACCGGTGCAGTATCCACCACCGATCAAGAAGTATCCA 285 ||||| ||| |||| |||||||| || | || |||||||| |||||||||||||| ||| Sbjct 264 CCGCCGATCAAGAAGTATCCTCCGCCAGAACAATATCCACCGCCGATCAAGAAGTACCCA 323 Query 286 CCGCCACCATACGAGCATC-CACCGGTGAAGTATCCACCACCGATCAAGACTTACCCTCA 344 ||| | || |||||| | | ||| | ||||||| |||||||| ||||||||||| Sbjct 324 CCGTCGCCGTACGAG-A-CTTACC-CT----CATCCACCGCCGATCAAAACTTACCCTCA 376 Query 345 TCCGCCGGTGAAGTATCCTCCACC-AG-AACAGT-ATCC--A-CCGCCGATTAAGAAGTA 398 ||||||||||||||||||||| || | || | | | || | |||||| | |||||| Sbjct 377 TCCGCCGGTGAAGTATCCTCCGCCGATCAAAACTTACCCTCATCCGCCGGT---GAAGTA 433 Query 399 TCCTCCACC-AG-AACAGT-ATCC--A-CCGCCGATTAAGAAGTATCCTCCACC-AG-AA 450 |||||| || | || | | | || | |||||| | || | |||||||| || | || Sbjct 434 TCCTCCGCCGATCAAAACTTACCCTCATCCGCCGGTGAA-A--TATCCTCCGCCGATCAA 490 Query 451 CAGT-AT--TCA-CCGCCTTTCAAGAAGTATCCTCCGCCAGAACAGTATCCACCACCGAT 506 | | | ||| ||||| | |||||||||||| ||||||||||||||||| ||||| Sbjct 491 AACTTACCCTCATCCGCCGGT---GAAGTATCCTCCCCCAGAACAGTATCCACCGCCGAT 547 Query 507 CAAGAAGTATCCTCCGCC 524 |||||||||||| ||||| Sbjct 548 CAAGAAGTATCCACCGCC 565 Score = 126 bits (68), Expect = 3e-28 Identities = 157/197 (80%), Gaps = 18/197 (9%) Strand=Plus/Plus Query 301 CATCCACCGGTGAAGTATCCACCACCGATCAAGACTTACCCTCATCCGCCGGTGAAGTAT 360 ||||| |||||||||||||| || |||||||| ||||||||||||||||||||||||||| Sbjct 375 CATCCGCCGGTGAAGTATCCTCCGCCGATCAAAACTTACCCTCATCCGCCGGTGAAGTAT 434 Query 361 CCTCCACC-AG-AACAGT-ATCC--A-CCGCCGATTAAGAAGTATCCTCCACC-AG-AAC 412 ||||| || | || | | | || | |||||| | || | |||||||| || | || Sbjct 435 CCTCCGCCGATCAAAACTTACCCTCATCCGCCGGTGAA-A--TATCCTCCGCCGATCAAA 491 Query 413 AGT-ATCC--A-CCGCCGATTAAGAAGTATCCTCCACCAGAACAGTATTCACCGCCTTTC 468 | | | || | |||||| | |||||||||||| |||||||||||| ||||||| || Sbjct 492 ACTTACCCTCATCCGCCGGT---GAAGTATCCTCCCCCAGAACAGTATCCACCGCCGATC 548 Query 469 AAGAAGTATCCTCCGCC 485 ||||||||||| ||||| Sbjct 549 AAGAAGTATCCACCGCC 565 Score = 124 bits (67), Expect = 1e-27 Identities = 151/189 (80%), Gaps = 16/189 (8%) Strand=Plus/Plus Query 630 GTATCCTCCGCCAGAACAGTATCCACCGCCGATCAAGAAGTATCCTCCGCCAATTAAGAA 689 ||||||||| |||||||| ||||||||||||||||||||||||||||||||| || || Sbjct 200 GTATCCTCCACCAGAACAATATCCACCGCCGATCAAGAAGTATCCTCCGCCAG--AACAA 257 Query 690 GTATCCTCCGCC-AG-AAGA-GTATCCACCACC-GATCAAGACTTATCCTCATCCCC-CT 744 ||||| ||||| | |||| |||||| || || || ||| | |||| | || | Sbjct 258 -TATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAA---T-ATCCACCGCCGATCA 312 Query 745 GTGAAGTATCCACCGCCTCCGTACAAGACTTACCCTCATCC---GCCGATCAAAACTTAT 801 |||||| |||||| | |||||| |||||||||||||||| ||||||||||||||| Sbjct 313 A-GAAGTACCCACCGTCGCCGTACGAGACTTACCCTCATCCACCGCCGATCAAAACTTAC 371 Query 802 CCTCCTCCG 810 |||| |||| Sbjct 372 CCTCATCCG 380 > Ahg917651 jgi|Araly1|917651|Al_scaffold_0008_2402 Length=393 Score = 318 bits (172), Expect = 5e-86 Identities = 242/275 (88%), Gaps = 7/275 (3%) Strand=Plus/Plus Query 627 GAAGTATCCTCCGCCAGAACAGTATCCACCGCCGATCAAGAAGTATCCTCCGCC-AATTA 685 |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | || Sbjct 124 GAAGTATCCTCCCCCAGAACAGTATCCACCGCCGATCAAGAAGTATCCACCGCCGACTT- 182 Query 686 AGAAGT-ATCCTCCGCCAGAAGAGTATCCACCACCGATCAAGACTTATCCTCATCCCCCT 744 | | |||| ||| | | |||||||||| |||||||||||||| |||||||| || Sbjct 183 A-CCCTCATCCACCG-GTG-A-AGTATCCACCGCCGATCAAGACTTACCCTCATCCGCCG 238 Query 745 GTGAAGTATCCACCGCCTCCGTACAAGACTTACCCTCATCCGCCGATCAAAACTTATCCT 804 |||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||| Sbjct 239 GTGAAGTATCCACCACCTCCGTACAAGACTTACCCTCATCCGCCGATCAAGACGTATCCT 298 Query 805 CCTCCGAAAGAATGTCCTCCTCCGCCTGAACATTACCCTTGGCCTCCGAAAAAGAAATAT 864 |||||||| ||||||||||||||||| | ||||||||||| || |||| ||||||||| Sbjct 299 CCTCCGAAGGAATGTCCTCCTCCGCCGGTACATTACCCTTTTCCCCCGATCAAGAAATAT 358 Query 865 CCTCCACCGGTTGAGTATCCGTCGCCGCCATATAA 899 ||||||||||||| |||||||||||| |||||||| Sbjct 359 CCTCCACCGGTTGTGTATCCGTCGCCACCATATAA 393 Score = 167 bits (90), Expect = 2e-40 Identities = 119/133 (89%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 237 GAAATATCCTCCACCGGTGCAGTATCCACCACCGATCAAGAAGTATCCACCGCC-ACCAT 295 ||| |||||||| || | ||||||||||| ||||||||||||||||||||||| | | | Sbjct 124 GAAGTATCCTCCCCCAGAACAGTATCCACCGCCGATCAAGAAGTATCCACCGCCGA-CTT 182 Query 296 ACGAGCATCCACCGGTGAAGTATCCACCACCGATCAAGACTTACCCTCATCCGCCGGTGA 355 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 183 ACCCTCATCCACCGGTGAAGTATCCACCGCCGATCAAGACTTACCCTCATCCGCCGGTGA 242 Query 356 AGTATCCTCCACC 368 ||||||| ||||| Sbjct 243 AGTATCCACCACC 255 Score = 148 bits (80), Expect = 7e-35 Identities = 94/101 (93%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 301 CATCCACCGGTGAAGTATCCACCACCGATCAAGACTTACCCTCATCCGCCGGTGAAGTAT 360 ||||| |||||||| ||||| || |||||||| ||||||||||||||||||||||||||| Sbjct 71 CATCCGCCGGTGAAATATCCTCCGCCGATCAAAACTTACCCTCATCCGCCGGTGAAGTAT 130 Query 361 CCTCCACCAGAACAGTATCCACCGCCGATTAAGAAGTATCC 401 ||||| ||||||||||||||||||||||| ||||||||||| Sbjct 131 CCTCCCCCAGAACAGTATCCACCGCCGATCAAGAAGTATCC 171 Score = 106 bits (57), Expect = 4e-22 Identities = 144/183 (79%), Gaps = 18/183 (10%) Strand=Plus/Plus Query 315 GTATCCACCACCGATCAAGACTTACCCTCATCCGCCGGTGAAGTATCCTCCACC-AG-AA 372 |||||| || |||||||| |||||||||||||||||||||||||||||||| || | || Sbjct 1 GTATCCTCCGCCGATCAAAACTTACCCTCATCCGCCGGTGAAGTATCCTCCGCCGATCAA 60 Query 373 CAGT-ATCC--A-CCGCCGATTAAGAAGTATCCTCCACC-AG-AACAGT-ATCC--A-CC 422 | | | || | |||||| | || | |||||||| || | || | | | || | || Sbjct 61 AACTTACCCTCATCCGCCGGTGAA-A--TATCCTCCGCCGATCAAAACTTACCCTCATCC 117 Query 423 GCCGATTAAGAAGTATCCTCCACCAGAACAGTATTCACCGCCTTTCAAGAAGTATCCTCC 482 |||| | |||||||||||| |||||||||||| ||||||| ||||||||||||| || Sbjct 118 GCCGGT---GAAGTATCCTCCCCCAGAACAGTATCCACCGCCGATCAAGAAGTATCCACC 174 Query 483 GCC 485 ||| Sbjct 175 GCC 177 > Ahg917652 jgi|Araly1|917652|Al_scaffold_0008_2403 Length=207 Score = 174 bits (94), Expect = 1e-42 Identities = 116/127 (91%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 435 GTATCCTCCACCAGAACAGTATTCACCGCCTTTCAAGAAGTATCCTCCGCCAGAACAGTA 494 |||||||||||||||||| ||| ||||||| ||||||||||||||||||||||||| || Sbjct 20 GTATCCTCCACCAGAACAATATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAATA 79 Query 495 TCCACCACCGATCAAGAAGTATCCTCCGCCAGAACATTATCCACCGCCGATAAAAAAGTA 554 |||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct 80 TCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAATATCCACCGCCGATCAAGAAGTA 139 Query 555 TCCTCCG 561 || ||| Sbjct 140 CCCACCG 146 Score = 169 bits (91), Expect = 5e-41 Identities = 116/128 (91%), Gaps = 2/128 (2%) Strand=Plus/Plus Query 552 GTATCCTCCGCAAGAACAGTATCCACCACCGATTAAAAAGTATCCTCCGCCAGAA-AAGT 610 ||||||||| | |||||| |||||||| ||||| || |||||||||||||||||| || | Sbjct 20 GTATCCTCCACCAGAACAATATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAA-T 78 Query 611 ATCCACCCCCGATCAAGAAGTATCCTCCGCCAGAACAGTATCCACCGCCGATCAAGAAGT 670 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 79 ATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAATATCCACCGCCGATCAAGAAGT 138 Query 671 ATCCTCCG 678 | || ||| Sbjct 139 ACCCACCG 146 Score = 163 bits (88), Expect = 2e-39 Identities = 114/127 (90%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 474 GTATCCTCCGCCAGAACAGTATCCACCACCGATCAAGAAGTATCCTCCGCCAGAACATTA 533 ||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||| || Sbjct 20 GTATCCTCCACCAGAACAATATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAATA 79 Query 534 TCCACCGCCGATAAAAAAGTATCCTCCGCAAGAACAGTATCCACCACCGATTAAAAAGTA 593 |||||||||||| || ||||||||||||| |||||| |||||||| ||||| || ||||| Sbjct 80 TCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAATATCCACCGCCGATCAAGAAGTA 139 Query 594 TCCTCCG 600 || ||| Sbjct 140 CCCACCG 146 Score = 147 bits (79), Expect = 2e-34 Identities = 134/158 (85%), Gaps = 13/158 (8%) Strand=Plus/Plus Query 591 GTATCCTCCGCCAGAA-AAGTATCCACCCCCGATCAAGAAGTATCCTCCGCCAGAACAGT 649 ||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||| | Sbjct 20 GTATCCTCCACCAGAACAA-TATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAAT 78 Query 650 ATCCACCGCCGATCAAGAAGTATCCTCCGCCAATTAAGAAGTATCCTCCGCC-AG-AAGA 707 |||||||||||||||||||||||||||||||| || || ||||| ||||| | |||| Sbjct 79 ATCCACCGCCGATCAAGAAGTATCCTCCGCCAG--AACAA-TATCCACCGCCGATCAAGA 135 Query 708 -GTATCCACCA-C-C-G-ATCAAGACTTATCCTCATCC 740 ||| ||||| | | | | | ||||||| |||||||| Sbjct 136 AGTACCCACCGTCGCCGTA-CGAGACTTACCCTCATCC 172 Score = 124 bits (67), Expect = 1e-27 Identities = 151/189 (80%), Gaps = 16/189 (8%) Strand=Plus/Plus Query 630 GTATCCTCCGCCAGAACAGTATCCACCGCCGATCAAGAAGTATCCTCCGCCAATTAAGAA 689 ||||||||| |||||||| ||||||||||||||||||||||||||||||||| || || Sbjct 20 GTATCCTCCACCAGAACAATATCCACCGCCGATCAAGAAGTATCCTCCGCCAG--AACAA 77 Query 690 GTATCCTCCGCC-AG-AAGA-GTATCCACCACC-GATCAAGACTTATCCTCATCCCC-CT 744 ||||| ||||| | |||| |||||| || || || ||| | |||| | || | Sbjct 78 -TATCCACCGCCGATCAAGAAGTATCCTCCGCCAGAACAA---T-ATCCACCGCCGATCA 132 Query 745 GTGAAGTATCCACCGCCTCCGTACAAGACTTACCCTCATCC---GCCGATCAAAACTTAT 801 |||||| |||||| | |||||| |||||||||||||||| ||||||||||||||| Sbjct 133 A-GAAGTACCCACCGTCGCCGTACGAGACTTACCCTCATCCACCGCCGATCAAAACTTAC 191 Query 802 CCTCCTCCG 810 |||| |||| Sbjct 192 CCTCATCCG 200 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42316437870 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5