BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G59580.1
Length=1522
Score E
Sequences producing significant alignments: (Bits) Value
Ahg917701 jgi|Araly1|917701|Al_scaffold_0008_2452 2065 0.0
Ahg496094 jgi|Araly1|496094|fgenesh2_kg.8__1910__AT5G59590.1 1712 0.0
Ahg485042 jgi|Araly1|485042|fgenesh2_kg.5__1034__AT3G46690.1 601 6e-171
Ahg485039 jgi|Araly1|485039|fgenesh2_kg.5__1031__AT3G46650.1 483 2e-135
> Ahg917701 jgi|Araly1|917701|Al_scaffold_0008_2452
Length=1362
Score = 2065 bits (1118), Expect = 0.0
Identities = 1284/1365 (94%), Gaps = 8/1365 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGAACTAGGAGTGAAGAGAAGGATAGTATTGGTTCCAGTTCCAGCACAAGGTCAT 60
|||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||
Sbjct 1 ATGGAAGAACTACGAGTGAAGAGAAGGATAGTTTTGGTTCCAGTTCCAGCTCAAGGTCAT 60
Query 61 GTAACTCCGATTATGCAACTCGGGAAGGCTCTTTACTCCAAGGGCTTCTCCATCACTGTT 120
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 61 GTAACTCCGATTATGCAACTCGGGAAGGCGCTTTACTCCAAGGGTTTCTCCATCACTGTT 120
Query 121 GTTCTCACACAGTATAATCGAGTTAGCTCATCCAAGGACTTCTCTGATTTTCATTTCCTC 180
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 121 GTTCTCACACAGTATAATCGAGTTAGCTCTTCCAAAGACTTCTCTGATTTTCATTTTCTC 180
Query 181 ACCATCCCAGGCAGCTTGACCGAGTCTGATCTCAAAAACCTTGGACCATTCAAGTTTCTC 240
||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||
Sbjct 181 ACCATCCCAGGCAGCTTAACTGAGTCTGATCTCAAAAACCTCGGACCATTCAAGTTTCTG 240
Query 241 TTCAAGCTCAATCAAATTTGCGAGGCAAGCTTCAAGCAATGTATTGGTCAACTATTGCAG 300
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 241 TTCAAGCTCAATCAAATTTGCGAGGCAGGCTTCAAGCAATGTATAGGTCAACTATTGCAG 300
Query 301 GAGCAAGGTAATGATATCGCTTGTGTCGTCTACGATGAGTACATGTACTTCTCCCAAGCT 360
||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 301 GAGCAAGGTAATGATATTGCTTGTGTTGTCTACGATGAGTACATGTACTTCTCCCAAGCA 360
Query 361 GCAGTTAAAGAGTTTCAACTTCCTAGCGTCCTCTTCAGCACGACAAGTGCTACTGCCTTT 420
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 361 GCAGTTAAGGAGTTTCAACTTCCTAGTGTCCTCTTCAGCACGACAAGTGCTACTGCTTTT 420
Query 421 GTCTGTCGCTCTGTTTTGTCTAGAGTCAACGCAGAGTCATTCTTGCTTGACATGAAAGAT 480
||||||||||||||||||||||||||| | |||||||| |||||||| ||||||||||||
Sbjct 421 GTCTGTCGCTCTGTTTTGTCTAGAGTCGATGCAGAGTCGTTCTTGCTCGACATGAAAGAT 480
Query 481 CCCAAAGTGTCAGACAAGGAATTTCCAGGGTTGCATCCGCTAAGGTACAAGGACCTGCCA 540
||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 481 CCCAAAGTGTCAGACAAGGTTTTTCCAGGGTTGCATCCGCTAAGGTACAAGGACCTACCA 540
Query 541 ACTTCAGCATTTGGGCCATTAGAGAGTATACTCAAGGTTTACAGTGAGACTGTCAACATT 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 541 ACTTCAGCATTTGGGCCAATAGAGAGTATACTCAAGGTTTACAGTGAGACTGTCAACATT 600
Query 601 CGAACAGCTTCGGCAGTTATCATCAACTCAACAAGCTGTCTAGAGAGCTCATCTTTGGCA 660
||||||||||| || ||||||||||||||| | || |||||||||||||| |||||||||
Sbjct 601 CGAACAGCTTCCGCTGTTATCATCAACTCAGCGAGTTGTCTAGAGAGCTCGTCTTTGGCA 660
Query 661 TGGTTACAAAAACAACTGCAAGTTCCAGTGTATCCTATAGGCCCACTTCACATTGCAGCT 720
||||| | | | |||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 661 TGGTTGCGACGAGAACTACAAGTTCCAGTGTATCCTATAGGCCCACTTCACATCGCAGCT 720
Query 721 TCAGCGCCTTCTAGTTTACTTGAAGAGGACAGGAGTTGCCTTGAGTGGTTGAACAAGCAA 780
|||||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||
Sbjct 721 TCAGCGCCTTCTAGTTTACTAGAAGAGGACAGAAGTTGCATTGAGTGGTTGAACAAGCAA 780
Query 781 AAAATAGGCTCAGTGATTTACATAAGTTTGGGAAGCTTGGCTCTAATGGAAACTAAAGAC 840
||| ||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 781 AAATTAGGCTCTGTGATTTACATAAGTTTGGGAAGCTTGGCTCTGATGGAAACCAAAGAC 840
Query 841 ATGTTGGAGATGGCTTGGGGTTTACGTAATAGCAACCAACCTTTCTTATGGGTGATCCGA 900
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 841 ATGTTGGAGATGGCTTGGGGTTTAAGTAATAGCAACCAACCTTTCCTATGGGTGATCCGA 900
Query 901 CCGGGTTCTATTCCCGGCTCGGAATGGACAGAGTCTTTACCGGAGGAATTCAGTAGGTTG 960
|| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 901 CCAGGTTCTATTCCCGGCTCGGAATGGACAGAGTCCTTACCGGAGGAATTCAGTAGGTTG 960
Query 961 GTTTCAGAAAGAGGTTACATTGTGAAATGGGCACCACAGATAGAAGTTCTCAGACATCCT 1020
||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||
Sbjct 961 GTTTCAGAAAGAGGTTACATTGTGAAATGGGCACCACAGATGGACGTTCTCAGACACCCT 1020
Query 1021 GCAGTGGGAGGGTTTTGGAGTCACTGCGGATGGAACTCGACCCTAGAGAGCATCGGGGAA 1080
||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 1021 GCAGTAGGAGGGTTTTGGAGTCACTGCGGATGGAACTCGACGCTAGAGAGCATCGGTGAA 1080
Query 1081 GGAGTTCCGATGATCTGTAGGCCTTTTAC-GGGAGATCAGAAAGTCAATGCGA-GGTACT 1138
||||||||||||||||||||||||||||| ||| ||||||||||||||||| | ||||||
Sbjct 1081 GGAGTTCCGATGATCTGTAGGCCTTTTACCGGG-GATCAGAAAGTCAATGC-ACGGTACT 1138
Query 1139 TAGAGAGAGTTTGGAGAATTGGGGTTCAATTGGAAGGAG-AGCTGGATAAAGGAACAGTG 1197
|||||||||||||||||||||||||||| ||||| |||| | |||||||||||||| |||
Sbjct 1139 TAGAGAGAGTTTGGAGAATTGGGGTTCAGTTGGAGGGAGCA-CTGGATAAAGGAACTGTG 1197
Query 1198 GAGAGAGCTGTAGAGAGATTGATTATGGATGAAGAAGGAGCAGAAATGAGGAAGAGAGTT 1257
| ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |
Sbjct 1198 GGGAGAGCTGTAGAGAGGTTGATTGTGGATGAAGAAGGAGCAGAAATGAGGAAGAGAGCT 1257
Query 1258 ATCAACTTGAAAGAGAAGCTTCAAGCCTCTGTCAAGA-GTAGAGGTTCCTCATTCAGCTC 1316
||||||||||||||||||||| |||||||||| | || || ||||||| |||| ||||||
Sbjct 1258 ATCAACTTGAAAGAGAAGCTTGAAGCCTCTGTTA-GAAGTGGAGGTTCTTCATGCAGCTC 1316
Query 1317 ATTAGACAACTTTGTCAATTCCTTAAAAATGATGAATTTCATGTA 1361
|| ||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1317 ATCAGACAACTTTGTCAATTCCTTGAAAATGAAGAATTTCATGTA 1361
> Ahg496094 jgi|Araly1|496094|fgenesh2_kg.8__1910__AT5G59590.1
Length=1452
Score = 1712 bits (927), Expect = 0.0
Identities = 1226/1369 (90%), Gaps = 26/1369 (2%)
Strand=Plus/Plus
Query 1 ATGGAAG-AACTAGGAGTGAAG-AG--AAGGATAGTATTGGTTCCAGTTCCAGCACAAGG 56
||||| | || || |||||||| || ||||||||| || || |||||||||||||||||
Sbjct 6 ATGGAGGAAAATA-GAGTGAAGAAGACAAGGATAGTGTTAGTACCAGTTCCAGCACAAGG 64
Query 57 TCATGTAACTCCGATTATGCAACTCGGGAAGGCTCTTTACTCCAAGGGCTTCTCCATCAC 116
||| ||||||||||| |||||||||||||| |||||| |||| ||||| |||||||||||
Sbjct 65 TCACGTAACTCCGATGATGCAACTCGGGAAAGCTCTTCACTCAAAGGGTTTCTCCATCAC 124
Query 117 TGTTGTTCTCACACAGTATAATCGAGTTAGCTCATCCAAGGACTTCTCTGATTTTCATTT 176
||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 125 TGTTGTTCTGACACAGTATAATCGAGTTAGCTCTTCCAAAGACTTCTCTGATTTTCATTT 184
Query 177 CCTCACCATCCCAGGCAGCTTGACCGAGTCTGATCTCAAAAACCTTGGACCATTCAAGTT 236
||||||||||||||||||||| || ||||| |||||||||||||| |||||| || ||
Sbjct 185 CCTCACCATCCCAGGCAGCTTAACTGAGTCGGATCTCAAAAACCTAGGACCACAAAATTT 244
Query 237 TCT-CTTCAAGCTCAATCAAATTTGCGAGGCAAGCTTCAAGCAATGTATTGGTCAACTAT 295
| | || ||||||||||||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct 245 TGTGCT-CAAGCTCAATCAAATCTGTGAGGCAAGCTTCAAGCAGTGTATAGGTCAACTAT 303
Query 296 TGCAG-GAGCAAGGTAATGAT-ATC--GCTTGTGTCGTCTACGATGAGTACATGTACTTC 351
||| | || ||| |||||||| || |||||||| ||||||||||||||||||||||||
Sbjct 304 TGC-GTGAACAATGTAATGATGATATTGCTTGTGTTGTCTACGATGAGTACATGTACTTC 362
Query 352 TCCCAAGCTGCAGTTAAAGAGTTTCAACTTCCTAGCGTCCTCTTCAGCACGACAAGTGCT 411
|| || ||||||||| | |||||||||||||| || ||| |||| |||||||||||||||
Sbjct 363 TCTCATGCTGCAGTTCAGGAGTTTCAACTTCCCAGTGTCGTCTTTAGCACGACAAGTGCT 422
Query 412 ACTGCCTTTGTCTGTCGCTCTGTTTTGTCTAGAGTCAACGCAGAGTCATTCTTGCTTGAC 471
||||| |||||||||||||||||||||||||||||| |||| |||||||||||| | |||
Sbjct 423 ACTGCTTTTGTCTGTCGCTCTGTTTTGTCTAGAGTCGACGCGGAGTCATTCTTGATCGAC 482
Query 472 ATGAAAGATCCC-AAAGTGTCA-GACAAGGAATTTCCAGGGTTGCATCCGCTAAGGTACA 529
||||||||||| ||| | || ||||| | |||||||||||||||||| ||||||||||
Sbjct 483 ATGAAAGATCCTGAAAC-G-CAAGACAAAGTATTTCCAGGGTTGCATCCTCTAAGGTACA 540
Query 530 AGGACCTGCCAACTTCAGCATTTGGGCCATTAGAGAGTATACTCAAGGTTTACAGTGAGA 589
||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 541 AGGACCTACCAACTTCAGCATTTGGGCCATTAGGGAGTACGCTCAAGGTTTACAGTGAGA 600
Query 590 CTGTCAACATTCGAACAGCTTCGGCAGTTATCATCAACTCAACAAGCTGTCTAGAGAGCT 649
|||| |||| |||||||||||| || ||||||||||| ||| ||||||||||||||||||
Sbjct 601 CTGTGAACACTCGAACAGCTTCTGCTGTTATCATCAATTCAGCAAGCTGTCTAGAGAGCT 660
Query 650 CATCTTTGGCATGGTTACAAAAACAACTGCAAGTTCCAGTGTATCCTATAGGCCCACTTC 709
|||||||||||||||| ||| ||||||| ||||||||||||| |||||||||||||||||
Sbjct 661 CATCTTTGGCATGGTTGCAACAACAACTACAAGTTCCAGTGTTTCCTATAGGCCCACTTC 720
Query 710 ACATTGCAGCTTCAGCGCCTTCTAGTTTACTTGAAGAGGACAGGAGTTGCCTTGAGTGGT 769
||||| ||||||||||||||||||||||||| ||||||||||| |||||| |||||||||
Sbjct 721 ACATTACAGCTTCAGCGCCTTCTAGTTTACTAGAAGAGGACAGAAGTTGCATTGAGTGGT 780
Query 770 TGAACAAGCAAAAAAT-AGGCTCAGTGATTTACATAAGTTTGGGAAGCTTGGCTCTAATG 828
|||||||||| ||| | | ||||||| ||||||||||| ||||| ||||||||||||| |
Sbjct 781 TGAACAAGCAGAAA-TCAAGCTCAGTAATTTACATAAGCTTGGGTAGCTTGGCTCTAACG 839
Query 829 GAAACTAAAGACATGTTGGAGATGGCTTGGGGTTT-ACGTAATAGCAACCAACCTTTCTT 887
|||| ||||| |||||||||||||||||||| || | |||| |||| ||||||||||||
Sbjct 840 CAAACGAAAGAAATGTTGGAGATGGCTTGGGGATTGA-GTAACAGCAGCCAACCTTTCTT 898
Query 888 ATGGGTGATCCGACCGGGTTCTATTCCCGGCTCGGAATGGACAGAGTCTTTACCGGAGGA 947
|||||||||||||||||||||| |||| ||||| |||||||||||||| ||||| | |||
Sbjct 899 ATGGGTGATCCGACCGGGTTCTGTTCCTGGCTCAGAATGGACAGAGTCCTTACCAGTGGA 958
Query 948 ATTCAGTAGGTTGGTTTCAGAAAGAGGTTACATTGTGAAATGGGCACCACAGATAGAAGT 1007
|||||| | ||||||| ||||||| ||||| | ||||||||||||||||||||| |||||
Sbjct 959 ATTCAGCAAGTTGGTTGCAGAAAGGGGTTATACTGTGAAATGGGCACCACAGATGGAAGT 1018
Query 1008 TCTCAGACATCCTGCAGTGGGAGGGTTTTGGAGTCACTGCGGATGGAACTCGACCCTAGA 1067
||||||||||||||| || |||||||||||||||||||| |||||||||||||| |||||
Sbjct 1019 TCTCAGACATCCTGCGGTAGGAGGGTTTTGGAGTCACTGTGGATGGAACTCGACGCTAGA 1078
Query 1068 GAGCATCGGGGAAGGAGTTCCGATGATCTGTAGGCCTTTTAC-GGGAGATCAGAAAGTCA 1126
||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||
Sbjct 1079 GAGCATCGGGGAAGGAGTTCCGATGATTTGTAGGCCTTTTACCGGG-GATCAGAAAGTCA 1137
Query 1127 ATGCGAGGTACTTAGAGAGAGTTTGGAGAATTGGGGTTCAATTGGAAGGAGAGCTGGATA 1186
|||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 1138 ATGCAAGGTACTTAGAGAGAGTTTGGAGAATTGGGGTTCAGTTGGAGGGAGAGCTGGATA 1197
Query 1187 AAGGAACAGTGGAGAGAGCTGTAGAGAGATTGATTATGGATGAAGAAGGAGCAGAAATGA 1246
||||||| |||||||||||| ||||||| ||| || ||||||||||||||||||||||||
Sbjct 1198 AAGGAACTGTGGAGAGAGCTCTAGAGAGGTTGCTTGTGGATGAAGAAGGAGCAGAAATGA 1257
Query 1247 GGAAGAGAGTTATCAACTTGAAAGAGAAGCTTCAAGCCTCTGTCAAGAGTAG-AGGTTCC 1305
|||||||| || ||||||||||||||||| |||||||||||| || | | |||||||
Sbjct 1258 GGAAGAGAACCATTGACTTGAAAGAGAAGCTTGAAGCCTCTGTCA-GAATTGGAGGTTCC 1316
Query 1306 TCATTCAGCTCATTAGACAACTTTGTCAATTCCTTAA-AA-ATGATGAA 1352
|||| ||||||||||||| |||||||||||||||| || ||||||||
Sbjct 1317 TCATGCAGCTCATTAGACGACTTTGTCAATTCCTTGTGAAGATGATGAA 1365
> Ahg485042 jgi|Araly1|485042|fgenesh2_kg.5__1034__AT3G46690.1
Length=1501
Score = 601 bits (325), Expect = 6e-171
Identities = 1053/1391 (76%), Gaps = 104/1391 (7%)
Strand=Plus/Plus
Query 18 GAAGAGAAGGATAGTATTGGTTCCAGTTCCAGCACAAGGTCATGTAACTCCGATTATGCA 77
|||| ||||||| || || ||||||||| | ||||||||||| || |||| || |||||
Sbjct 66 GAAGCGAAGGATTGTGTTAGTTCCAGTTGCTGCACAAGGTCACGTTACTCAAATGATGCA 125
Query 78 ACTCGGGAAGGCTCTTTA-CTCCAAGGGCTTCTCCATCACTGTTGTTCTCACACAGTAT- 135
|| || || || ||| | | ||| |||||||| || ||||| | || | ||||| |
Sbjct 126 GCTTGGAAAAGCCCTTCAGTTACAA-GGCTTCTCAATTACTGTAGCTCAGAGACAGT-TG 183
Query 136 AATCGAGTTAG---CTCATC-CAAGGACTTCTCTGATTTTCA-TTTCCTCACCATCCCAG 190
| | | | || |||||| ||| ||| ||| |||| | ||| ||||||| ||||
Sbjct 184 ACGCAAATAAGCTTCTCATCGCAACTTTTTC-CTGGTTTTGACTTT-GTCACCATACCAG 241
Query 191 -GCAGCTTGACC-GAGTCTG-ATCTCAA-AAACCTTGGACCATTC-AAGTTTCTCTTCAA 245
| ||||| ||| |||||| |||| || ||| || |||||| | ||| ||| | ||
Sbjct 242 AG-AGCTT-ACCTCAGTCTGAATCT-AAGAAA-CTAGGACCA-GCTGAGTATCTGATGAA 296
Query 246 GCTCAATC-AAATTTGCGAGGCAAGCTTCAAGCAATGTATTGGTCAACTATTGCA-GGAG 303
||| || | ||| ||||||||||||||||| | ||||| |||| ||||| | | |
Sbjct 297 GCTTAA-CAAAACAAGCGAGGCAAGCTTCAAGGAGTGTATAAGTCAGTTATTG-ATGCAA 354
Query 304 CAAGGTAATGATATCGCTTGTGTCGTCTACGATGAG-TACATGTACTTCTCCCAAGCTGC 362
||||| |||||||| || ||| || |||| || || | |||||||| | ||||||||
Sbjct 355 CAAGGCAATGATATAGCATGTATCATCTATGACAAGCT-TATGTACTTTTGTCAAGCTGC 413
Query 363 AGTTAAAGAGTTTCAA-CTTCCTAGCGTCCTCTTCAGCACGA-CAAGTGCTACTGCCTT- 419
|| |||||||||| || |||||||| ||| | ||||| || | | |||||||| ||
Sbjct 414 AGCTAAAGAGTTT-AAGCTTCCTAGTGTCATATTCAGTACTAGC-AGTGCTAC--AATTC 469
Query 420 -TGTCTGTC-GCTCTGTTTTGTCTAGAGTCAACGCAGAGTCA-TTCTTGCTTGACATGAA 476
|| || | || |||||| || | |||| || ||| | |||||| | ||||||||
Sbjct 470 AAGTTTG-CTACTGTGTTTTAAGTAAACTCAATGCCGAG-AAGTTCTTGATCGACATGAA 527
Query 477 AGATCC-CAAAGTGTC-AGACAAGGAATTTCCAGGGTTGCATCCGCTAAGGTACAAGGAC 534
|||||| ||| || | |||||||| ||| ||| |||||||| |||| ||||| |||
Sbjct 528 AGATCCTGAAA-TG-CAAGACAAGGTATTGGAAGGTTTGCATCCTTTAAGATACAAAGAC 585
Query 535 CTGCCAACTTCAGCATTTGGGCCATTAGAGAGTA-TACTCAAGGTTTACAGTGAGACT-G 592
| |||||||||| |||||| ||||||| || | | | || | | || || | | |
Sbjct 586 TTACCAACTTCAGGATTTGGACCATTAG-GACCACTTTTGGAGATGTGTAGGGA-AGTAG 643
Query 593 TCAACATTCGAACAGCTTCGGC-AGTTATCATCAACT-CAACAAGCTGTCTAGAGAGCTC 650
| |||| |||||||||| || | |||||||||| | | | ||||||||||||||||
Sbjct 644 TTAACAAAAGAACAGCTTCCGCTA-TTATCATCAA-TACTGCGAGCTGTCTAGAGAGCTT 701
Query 651 ATCTTTGGCATGGTTACAAAAACAAC-TGCAAGTTCCAGTGTATC-CTA-TAGGCCCACT 707
|||| || ||||| | ||| || ||| || || ||||||| || | | | ||||||| ||
Sbjct 702 ATCTCTGTCATGGCTGCAACAAGAACTTGGAA-TTCCAGTTTA-CGC-ATTAGGCCCTCT 758
Query 708 TCACATTGCAGCTTCAGCGCCT---TCTAGTTTACTTG-AAGAGGACAGGAGTTGCCTTG 763
||||||| |||||||| ||||| | | ||||| || ||||||||| ||| || |||
Sbjct 759 TCACATTACAGCTTCATCGCCTGGACCGACTTTAC-TGCAAGAGGACAAGAGCTGTGTTG 817
Query 764 AGTGGTTGAACAAGCA-AAA-AATAGGCTCAGTGATTTACATAAGTTTGGGAAGCTTGGC 821
| ||| |||||||||| ||| | ||| |||||||| |||||| | ||||||||| ||
Sbjct 818 AATGGCTGAACAAGCAGAAACCA-AGG-TCAGTGATATACATATGCTTGGGAAGCAAAGC 875
Query 822 TCTA-ATGGAAACTAAAGACATGTTGGAGATGGCTTGGGGTTTACGTAATAGCAACCAAC 880
|| | |||||||| | || ||||| |||||||||||||| || |||||||||||||||
Sbjct 876 TC-ACATGGAAACCATGGAGATGTTAGAGATGGCTTGGGGGTTGTGTAATAGCAACCAAC 934
Query 881 CTTTCTTATGGGTGATCCGACCGGGTTCTATTCCC-GGCTCGGAATGGA-CAGAGTCTTT 938
||||||||||||| |||||||| || ||| | | | ||||| || |||| | ||||| ||
Sbjct 935 CTTTCTTATGGGTCATCCGACCTGGCTCTGT-CGCTGGCTCCGAGTGGATC-GAGTCATT 992
Query 939 ACCGGAGGAATTCAGTAGGTTGGTTTCAGAAAGAGGTTACATTGTGAAATGGGCACCACA 998
|| |||||| |||||| | |||| ||| ||||| |||||||||||||||||||| ||
Sbjct 993 GCCAGAGGAAATCAGTAAGATGGTCAAAGATAGAGGGTACATTGTGAAATGGGCACCTCA 1052
Query 999 GATAGAAGTTCTCAG-ACATCCTGCAGTGGGAGGGTTTTGGAGTCACTGCGGATGGAACT 1057
|||||||| || || |||||||||||||||||| || ||||| ||||| ||||||||||
Sbjct 1053 AATAGAAGTACT-AGGACATCCTGCAGTGGGAGGCTTCTGGAGCCACTGTGGATGGAACT 1111
Query 1058 CGACCCTAGAGAGCATCGGGGAAGGAGTTCCGATGATCTGTAGGCCTTTT-ACGG-GAGA 1115
| || || ||||| || | ||||||||| || ||||| ||||||||||| | || || |
Sbjct 1112 CAACACTTGAGAGTATTGCGGAAGGAGTCCCAATGATTTGTAGGCCTTTCCAAGGCGA-A 1170
Query 1116 TCAGAAAGTCAA-TGCGAGGTACT-TAGAGAGAGTTTGGAGAATTGGGGTTCAA-TTGGA 1172
||||| || || ||| | ||| | |||| || ||||||||||| ||| ||| || ||
Sbjct 1171 -CAGAA-GTTAAATGCAATGTA-TATAGAAAGTGTTTGGAGAATAGGGATTCTGCTTCGA 1227
Query 1173 AGGAGA-GCTGGATAA-AGGAACAGTG--GAGAGAGCTGTAGA-GAGATTGATTATGGAT 1227
|| || | ||| || ||| | ||| ||||||||||| || ||| ||||| ||||||
Sbjct 1228 -GGTGAAG-TGGG-AAGAGG--CGGTGTAGAGAGAGCTGT-GAAGAGGTTGATCATGGAT 1281
Query 1228 GAAGAAGGAGCAGAAATGAGGAAGAGAGTTATCAACTTGAAAGAGAAGCTTCAA-GCCTC 1286
|||||||| |||| ||||||| |||| | | | | || ||||||||||| ||| |||||
Sbjct 1282 GAAGAAGGTGCAGGAATGAGGGAGAGGGCTCTTGATTTAAAAGAGAAGCT-CAAAGCCTC 1340
Query 1287 TGTCAAGA-GTAGAGGTTCCTCATTCAGCTCATTAGACAA-CTTTGTCAA-TTCCTTAAA 1343
||| |||| || |||| ||||||| || | |||| || | ||| ||||| ||| || ||
Sbjct 1341 TGT-AAGAAGTGGAGGCTCCTCATACAACGCATTGGATGAGCTT-GTCAAGTTC-TTGAA 1397
Query 1344 AA-TGA-TGAA 1352
| ||| ||||
Sbjct 1398 TACTGAGTGAA 1408
> Ahg485039 jgi|Araly1|485039|fgenesh2_kg.5__1031__AT3G46650.1
Length=1301
Score = 483 bits (261), Expect = 2e-135
Identities = 582/731 (80%), Gaps = 46/731 (6%)
Strand=Plus/Plus
Query 602 GAACAGCTTC-GGCAGTTATCATCAACTCAACAAGCTGTCTAGAGAGCTCATCTTTGGCA 660
|||||||||| || |||||||||||| | ||||||||||||||||| |||||| ||
Sbjct 550 GAACAGCTTCTGG-TGTTATCATCAACACGGTGAGCTGTCTAGAGAGCTCGTCTTTGTCA 608
Query 661 TGGTTACAAAAACAACTGCA-AGTTCCAGTGTATCCTA-TAGGCCCACTTCACATTG-CA 717
||| | ||| || || | || | ||||||||| ||| | ||||||| ||||||| || ||
Sbjct 609 TGGCTGCAACAAGAAGT-CAGAATTCCAGTGTCTCC-ATTAGGCCCTCTTCACA-TGACA 665
Query 718 GCTTCAGCGCCTTCTAGTTTACTTGAAGAGGACAGGAGTTGCCTTGAGTGGTTGAACAAG 777
|||||| | ||||||||||||||||||||||||||||| ||| |||| ||| ||||||||
Sbjct 666 GCTTCACCACCTTCTAGTTTACTTGAAGAGGACAGGAGCTGCATTGAATGGCTGAACAAG 725
Query 778 CAAAAAAT-AGGCTCAGTGATTTACATAAGTTTGGGAAG-CTTGGCTCTAATGGAAACTA 835
|| ||| ||| ||||| || || ||||| | |||| ||||| || ||||||||| |
Sbjct 726 CAGAAACCGAGG-TCAGTCATATATATAAGCGTAGGAACACTTGG-TCAAATGGAAACCA 783
Query 836 AAGACA-TGTTGGAGATGGCTTGGGGTTTACGTAATAGCAACCAACC-TTTCTTATGGGT 893
| || | ||||||||||||||||||| || |||||||||||||||| ||| ||||||||
Sbjct 784 AGGA-AGTGTTGGAGATGGCTTGGGGGTTGTGTAATAGCAACCAACCGTTT-TTATGGGT 841
Query 894 GATCCGACCGGGTTCTATTCCC-GGC-TCGGAATGG-ACAGAGTCTTTACCGGAGGAATT 950
|||||| ||||||| || || ||| | || || | ||| || || || || |||||
Sbjct 842 TATCCGAGCGGGTTCCAT-CCTTGGCATT--AACGGTATAGATTCATTGCCAGATGAATT 898
Query 951 CAGTAGGTTGGTTTCAGAAAGAGGTTACATTGTGAAATGGGCACCACAGATAGAAGTTCT 1010
|| || | |||| ||||||| ||| |||||||||||| ||||||| ||||||||||| ||
Sbjct 899 CAATAAGATGGTCTCAGAAATAGGATACATTGTGAAACGGGCACCGCAGATAGAAGTACT 958
Query 1011 CAG-ACATCCTGCAGTGGGAGGGTTTTGGAGTCACTGCGGATGGAACTCGACCCTAGAGA 1069
|| |||||||||||||||||| || ||||| ||||| ||||||||||| || || ||||
Sbjct 959 -AGGACATCCTGCAGTGGGAGGCTTCTGGAGCCACTGTGGATGGAACTCAACACTCGAGA 1017
Query 1070 GCATCGGGGAAGGAGTTCCGATGATCTGTAGGCCTTTT-ACGGGAGATCAGAAAGTC-AA 1127
|||| || |||||||| || ||||| || ||||||||| | ||| || || ||||| ||
Sbjct 1018 GCATTGGAGAAGGAGTGCCAATGATTTGCAGGCCTTTTCATGGG-GAGCA-AAAGTTGAA 1075
Query 1128 TGCGAGGTAC-TTAGAGAGAGTTTGGAGAATTGGGGTTCAATTGGAAGG-AGAGCTGGAT 1185
|| | ||| || || |||||||||||||| ||| |||| ||||||| | || |||||
Sbjct 1076 CGCAATGTATATT-GAAAGAGTTTGGAGAATAGGGTTTCAGGTGGAAGGTAAAG-TGGAT 1133
Query 1186 AAAGGA-ACAGTGGAGAGAGCTGTAGA-GAGATTGATTATGGATGAAGAAGGAGCAGAAA 1243
| |||| | ||| |||| |||||| || ||| ||||| ||||||||||||| || | |
Sbjct 1134 AGAGGAGA-AGTTGAGAAAGCTGT-GAAGAGGTTGATCGTGGATGAAGAAGGTGCGGGGA 1191
Query 1244 TG-AGGAAGAGAG---TTATCAACTTGAAAGAGAAGCTTCAA-GCCTCTGTCAAGAGTAG 1298
|| |||| ||||| || | || ||||||||||| ||| ||||||||||| | | |
Sbjct 1192 TGCAGGA-GAGAGCCCTTGTT--CTA-AAAGAGAAGCT-CAAAGCCTCTGTCAAAAATGG 1246
Query 1299 AGGTTCCTCAT 1309
||| ||||||
Sbjct 1247 AGGCGCCTCAT 1257
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 56983006520
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5