BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G59590.1
Length=1583
Score E
Sequences producing significant alignments: (Bits) Value
Ahg496094 jgi|Araly1|496094|fgenesh2_kg.8__1910__AT5G59590.1 2019 0.0
Ahg917701 jgi|Araly1|917701|Al_scaffold_0008_2452 1759 0.0
Ahg485042 jgi|Araly1|485042|fgenesh2_kg.5__1034__AT3G46690.1 638 0.0
> Ahg496094 jgi|Araly1|496094|fgenesh2_kg.8__1910__AT5G59590.1
Length=1452
Score = 2019 bits (1093), Expect = 0.0
Identities = 1291/1388 (93%), Gaps = 7/1388 (1%)
Strand=Plus/Plus
Query 60 aaacaatggaggaaaagca-agtgaaggagaCAAGGATAGTGTTGGTTCCAGTTCCAGCT 118
|||||||||||||||| | ||||||| |||||||||||||||| || |||||||||||
Sbjct 1 AAACAATGGAGGAAAA-TAGAGTGAAGAAGACAAGGATAGTGTTAGTACCAGTTCCAGCA 59
Query 119 CAAGGTCATGTAACTCCGATGATGCAACTAGGAAAAGCTCTTCACTCAAAGGGTTTCTCC 178
|||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 60 CAAGGTCACGTAACTCCGATGATGCAACTCGGGAAAGCTCTTCACTCAAAGGGTTTCTCC 119
Query 179 ATCACTGTTGTTCTGACACAGTCTAATCGAGTTAGCTCTTCCAAAGACTTCTCTGATTTC 238
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 120 ATCACTGTTGTTCTGACACAGTATAATCGAGTTAGCTCTTCCAAAGACTTCTCTGATTTT 179
Query 239 CATTTCCTCACCATCCCAGGCAGCTTAACTGAGTCTGATCTCCAAAACCTAGGACCACAA 298
||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||
Sbjct 180 CATTTCCTCACCATCCCAGGCAGCTTAACTGAGTCGGATCTCAAAAACCTAGGACCACAA 239
Query 299 AAGTTTGTGCTCAAGCTCAATCAAATTTGTGAGGCAAGCTTCAAGCAGTGTATAGGTCAA 358
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 240 AATTTTGTGCTCAAGCTCAATCAAATCTGTGAGGCAAGCTTCAAGCAGTGTATAGGTCAA 299
Query 359 CTATTGCATGAACAATGTAATAATGATATTGCTTGTGTCGTCTACGATGAGTACATGTAC 418
||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 300 CTATTGCGTGAACAATGTAATGATGATATTGCTTGTGTTGTCTACGATGAGTACATGTAC 359
Query 419 TTCTCTCATGCTGCAGTAAAAGAGTTTCAACTTCCTAGTGTCGTCTTTAGCACGACAAGT 478
||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||
Sbjct 360 TTCTCTCATGCTGCAGTTCAGGAGTTTCAACTTCCCAGTGTCGTCTTTAGCACGACAAGT 419
Query 479 GCTACTGCTTTTGTCTGTCGCTCTGTTTTGTCTAGAGTCAACGCAGAGTCGTTCTTGATC 538
||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||
Sbjct 420 GCTACTGCTTTTGTCTGTCGCTCTGTTTTGTCTAGAGTCGACGCGGAGTCATTCTTGATC 479
Query 539 GACATGAAAGATCCTGAAACACAAGACAAAGTATTTCCAGGGTTGCATCCTCTGAGGTAC 598
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 480 GACATGAAAGATCCTGAAACGCAAGACAAAGTATTTCCAGGGTTGCATCCTCTAAGGTAC 539
Query 599 AAGGATCTACCAACTTCAGTATTTGGGCCAATAGAGAGTACGCTCAAGGTTTACAGTGAG 658
||||| ||||||||||||| |||||||||| ||| |||||||||||||||||||||||||
Sbjct 540 AAGGACCTACCAACTTCAGCATTTGGGCCATTAGGGAGTACGCTCAAGGTTTACAGTGAG 599
Query 659 ACTGTGAACACTCGAACAGCTTCCGCTGTTATCATCAACTCAGCAAGCTGTTTAGAGAGC 718
||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||
Sbjct 600 ACTGTGAACACTCGAACAGCTTCTGCTGTTATCATCAATTCAGCAAGCTGTCTAGAGAGC 659
Query 719 TCATCTTTGGCAAGGTTGCAACAACAACTGCAAGTTCCGGTGTATCCTATAGGCCCACTT 778
|||||||||||| |||||||||||||||| |||||||| |||| ||||||||||||||||
Sbjct 660 TCATCTTTGGCATGGTTGCAACAACAACTACAAGTTCCAGTGTTTCCTATAGGCCCACTT 719
Query 779 CATATTACAGCTTCAGCGCCTTCTAGTTTACTAGAAGAAGACAGGAGTTGCGTTGAGTGG 838
|| ||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||
Sbjct 720 CACATTACAGCTTCAGCGCCTTCTAGTTTACTAGAAGAGGACAGAAGTTGCATTGAGTGG 779
Query 839 TTGAACAAGCAAAAATCAAATTCAGTTATTTACATAAGCTTGGGAAGCTTGGCTCTAATG 898
||||||||||| ||||||| ||||| ||||||||||||||||| ||||||||||||| |
Sbjct 780 TTGAACAAGCAGAAATCAAGCTCAGTAATTTACATAAGCTTGGGTAGCTTGGCTCTAACG 839
Query 899 GACACCAAAGACATGTTGGAGATGGCTTGGGGATTAAGTAATAGCAACCAACCTTTCTTA 958
| || ||||| ||||||||||||||||||||||| ||||| |||| |||||||||||||
Sbjct 840 CAAACGAAAGAAATGTTGGAGATGGCTTGGGGATTGAGTAACAGCAGCCAACCTTTCTTA 899
Query 959 TGGGTGGTCAGACCGGGCTCTATTCCGGGGTCAGAATGGACAGAGTCCTTACCAGAGGAA 1018
|||||| || ||||||| ||| |||| || ||||||||||||||||||||||||| ||||
Sbjct 900 TGGGTGATCCGACCGGGTTCTGTTCCTGGCTCAGAATGGACAGAGTCCTTACCAGTGGAA 959
Query 1019 TTCAATAGGTTGGTTTCAGAAAGAGGTTACATTGTGAAATGGGCTCCGCAGATGGAAGTT 1078
|||| | ||||||| ||||||| ||||| | |||||||||||| || ||||||||||||
Sbjct 960 TTCAGCAAGTTGGTTGCAGAAAGGGGTTATACTGTGAAATGGGCACCACAGATGGAAGTT 1019
Query 1079 CTCAGACATCCTGCAGTAGGAGGGTTTTGGAGTCACTGTGGATGGAACTCAACAG-TAGA 1137
|||||||||||||| ||||||||||||||||||||||||||||||||||| || | ||||
Sbjct 1020 CTCAGACATCCTGCGGTAGGAGGGTTTTGGAGTCACTGTGGATGGAACTCGAC-GCTAGA 1078
Query 1138 GAGCATCGGGGAAGGAGTTCCGATGATATGTAGGCCTTTCACCGGGGATCAGAAAGTCAA 1197
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1079 GAGCATCGGGGAAGGAGTTCCGATGATTTGTAGGCCTTTTACCGGGGATCAGAAAGTCAA 1138
Query 1198 TGCGAGGTACTTAGAGAGAGTTTGGAGAATTGGGGTTCAATTGGAGGGAGATCTGGATAA 1257
||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 1139 TGCAAGGTACTTAGAGAGAGTTTGGAGAATTGGGGTTCAGTTGGAGGGAGAGCTGGATAA 1198
Query 1258 AGAAACTGTGGAGAGAGCTGTAGAGTGGTTGCTTGTGGATGAAGAAGGAGCAGAAATGAG 1317
|| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1199 AGGAACTGTGGAGAGAGCTCTAGAGAGGTTGCTTGTGGATGAAGAAGGAGCAGAAATGAG 1258
Query 1318 GAAGAGAGCCATTGACTTGAAAGAAAAGATTGAAACCTCTGTTAGAAGTGGAGGTTCCTC 1377
||||||| |||||||||||||||| ||| ||||| ||||||| |||| ||||||||||||
Sbjct 1259 GAAGAGAACCATTGACTTGAAAGAGAAGCTTGAAGCCTCTGTCAGAATTGGAGGTTCCTC 1318
Query 1378 ATGCAGCTCACTAGACGACTTTGTTAATTCCATGTGAAGATGATGAAG-GGAGATAAGAT 1436
|||||||||| ||||||||||||| |||||| |||||||||||||||| |||| | |||
Sbjct 1319 ATGCAGCTCATTAGACGACTTTGTCAATTCCTTGTGAAGATGATGAAGAGGAGG-A-GAT 1376
Query 1437 AGTCCCTA 1444
||||||||
Sbjct 1377 AGTCCCTA 1384
> Ahg917701 jgi|Araly1|917701|Al_scaffold_0008_2452
Length=1362
Score = 1759 bits (952), Expect = 0.0
Identities = 1222/1352 (90%), Gaps = 20/1352 (1%)
Strand=Plus/Plus
Query 79 agtgaaggagaCAAGGATAGTGTTGGTTCCAGTTCCAGCTCAAGGTCATGTAACTCCGAT 138
|||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 15 AGTGAA-GAG--AAGGATAGTTTTGGTTCCAGTTCCAGCTCAAGGTCATGTAACTCCGAT 71
Query 139 GATGCAACTAGGAAAAGCTCTTCACTCAAAGGGTTTCTCCATCACTGTTGTTCTGACACA 198
|||||||| || || || ||| |||| |||||||||||||||||||||||||| |||||
Sbjct 72 TATGCAACTCGGGAAGGCGCTTTACTCCAAGGGTTTCTCCATCACTGTTGTTCTCACACA 131
Query 199 GTCTAATCGAGTTAGCTCTTCCAAAGACTTCTCTGATTTCCATTTCCTCACCATCCCAGG 258
|| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 132 GTATAATCGAGTTAGCTCTTCCAAAGACTTCTCTGATTTTCATTTTCTCACCATCCCAGG 191
Query 259 CAGCTTAACTGAGTCTGATCTCCAAAACCTAGGACCACAAAAGTTTGTGCTCAAGCTCAA 318
|||||||||||||||||||||| ||||||| |||||| |||||| || ||||||||||
Sbjct 192 CAGCTTAACTGAGTCTGATCTCAAAAACCTCGGACCATTCAAGTTTCTGTTCAAGCTCAA 251
Query 319 TCAAATTTGTGAGGCAAGCTTCAAGCAGTGTATAGGTCAACTATTGCATGAACAATGTAA 378
||||||||| |||||| |||||||||| |||||||||||||||||||| || ||| |
Sbjct 252 TCAAATTTGCGAGGCAGGCTTCAAGCAATGTATAGGTCAACTATTGCAGGAGCAA-G--G 308
Query 379 TAATGATATTGCTTGTGTCGTCTACGATGAGTACATGTACTTCTCTCATGCTGCAGTAAA 438
|||||||||||||||||| |||||||||||||||||||||||||| || || ||||| ||
Sbjct 309 TAATGATATTGCTTGTGTTGTCTACGATGAGTACATGTACTTCTCCCAAGCAGCAGTTAA 368
Query 439 AGAGTTTCAACTTCCTAGTGTCGTCTTTAGCACGACAAGTGCTACTGCTTTTGTCTGTCG 498
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct 369 GGAGTTTCAACTTCCTAGTGTCCTCTTCAGCACGACAAGTGCTACTGCTTTTGTCTGTCG 428
Query 499 CTCTGTTTTGTCTAGAGTCAACGCAGAGTCGTTCTTGATCGACATGAAAGATCCTGAAAC 558
||||||||||||||||||| | ||||||||||||||| |||||||||||||||| |||
Sbjct 429 CTCTGTTTTGTCTAGAGTCGATGCAGAGTCGTTCTTGCTCGACATGAAAGATCCC-AAAG 487
Query 559 A--CAAGACAAAGTATTTCCAGGGTTGCATCCTCTGAGGTACAAGGATCTACCAACTTCA 616
|| ||||| || ||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct 488 TGTCA-GACAAGGTTTTTCCAGGGTTGCATCCGCTAAGGTACAAGGACCTACCAACTTCA 546
Query 617 GTATTTGGGCCAATAGAGAGTACGCTCAAGGTTTACAGTGAGACTGTGAACACTCGAACA 676
| |||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||
Sbjct 547 GCATTTGGGCCAATAGAGAGTATACTCAAGGTTTACAGTGAGACTGTCAACATTCGAACA 606
Query 677 GCTTCCGCTGTTATCATCAACTCAGCAAGCTGTTTAGAGAGCTCATCTTTGGCAAGGTTG 736
|||||||||||||||||||||||||| || ||| |||||||||| ||||||||| |||||
Sbjct 607 GCTTCCGCTGTTATCATCAACTCAGCGAGTTGTCTAGAGAGCTCGTCTTTGGCATGGTTG 666
Query 737 CAACAACAACTGCAAGTTCCGGTGTATCCTATAGGCCCACTTCATATTACAGCTTCAGCG 796
| || | |||| |||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct 667 CGACGAGAACTACAAGTTCCAGTGTATCCTATAGGCCCACTTCACATCGCAGCTTCAGCG 726
Query 797 CCTTCTAGTTTACTAGAAGAAGACAGGAGTTGCGTTGAGTGGTTGAACAAGCAAAAATCA 856
|||||||||||||||||||| ||||| |||||| |||||||||||||||||||||||| |
Sbjct 727 CCTTCTAGTTTACTAGAAGAGGACAGAAGTTGCATTGAGTGGTTGAACAAGCAAAAATTA 786
Query 857 AATTCAGTTATTTACATAAGCTTGGGAAGCTTGGCTCTAATGGACACCAAAGACATGTTG 916
|| || ||||||||||| ||||||||||||||||| ||||| |||||||||||||||
Sbjct 787 GGCTCTGTGATTTACATAAGTTTGGGAAGCTTGGCTCTGATGGAAACCAAAGACATGTTG 846
Query 917 GAGATGGCTTGGGGATTAAGTAATAGCAACCAACCTTTCTTATGGGTGGTCAGACCGGGC 976
|||||||||||||| |||||||||||||||||||||||| |||||||| || |||| ||
Sbjct 847 GAGATGGCTTGGGGTTTAAGTAATAGCAACCAACCTTTCCTATGGGTGATCCGACCAGGT 906
Query 977 TCTATTCCGGGGTCAGAATGGACAGAGTCCTTACCAGAGGAATTCAATAGGTTGGTTTCA 1036
|||||||| || || |||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 907 TCTATTCCCGGCTCGGAATGGACAGAGTCCTTACCGGAGGAATTCAGTAGGTTGGTTTCA 966
Query 1037 GAAAGAGGTTACATTGTGAAATGGGCTCCGCAGATGGAAGTTCTCAGACATCCTGCAGTA 1096
|||||||||||||||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct 967 GAAAGAGGTTACATTGTGAAATGGGCACCACAGATGGACGTTCTCAGACACCCTGCAGTA 1026
Query 1097 GGAGGGTTTTGGAGTCACTGTGGATGGAACTCAACAG-TAGAGAGCATCGGGGAAGGAGT 1155
|||||||||||||||||||| ||||||||||| || | ||||||||||||| ||||||||
Sbjct 1027 GGAGGGTTTTGGAGTCACTGCGGATGGAACTCGAC-GCTAGAGAGCATCGGTGAAGGAGT 1085
Query 1156 TCCGATGATATGTAGGCCTTTCACCGGGGATCAGAAAGTCAATGCGA-GGTACTTAGAGA 1214
||||||||| ||||||||||| ||||||||||||||||||||||| | ||||||||||||
Sbjct 1086 TCCGATGATCTGTAGGCCTTTTACCGGGGATCAGAAAGTCAATGC-ACGGTACTTAGAGA 1144
Query 1215 GAGTTTGGAGAATTGGGGTTCAATTGGAGGGAG-ATCTGGATAAAGAAACTGTGGAGAGA 1273
|||||||||||||||||||||| |||||||||| | |||||||||| |||||||| ||||
Sbjct 1145 GAGTTTGGAGAATTGGGGTTCAGTTGGAGGGAGCA-CTGGATAAAGGAACTGTGGGGAGA 1203
Query 1274 GCTGTAGAGTGGTTGCTTGTGGATGAAGAAGGAGCAGAAATGAGGAAGAGAGCCATTGAC 1333
||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1204 GCTGTAGAGAGGTTGATTGTGGATGAAGAAGGAGCAGAAATGAGGAAGAGAGCTATCAAC 1263
Query 1334 TTGAAAGAAAAGATTGAAACCTCTGTTAGAAGTGGAGGTTCCTCATGCAGCTCA-CTAGA 1392
|||||||| ||| ||||| |||||||||||||||||||||| |||||||||||| | |||
Sbjct 1264 TTGAAAGAGAAGCTTGAAGCCTCTGTTAGAAGTGGAGGTTCTTCATGCAGCTCATC-AGA 1322
Query 1393 CGACTTTGTTAATTCCATGTGAAGATGATGAA 1424
| ||||||| |||||| | |||| |||| |||
Sbjct 1323 CAACTTTGTCAATTCC-T-TGAAAATGAAGAA 1352
> Ahg485042 jgi|Araly1|485042|fgenesh2_kg.5__1034__AT3G46690.1
Length=1501
Score = 638 bits (345), Expect = 0.0
Identities = 1018/1333 (76%), Gaps = 85/1333 (6%)
Strand=Plus/Plus
Query 91 AAGGATAGTGTTGGTTCCAGTTCCAGCTCAAGGTCATGTAACTCCGATGATGCAACTAGG 150
|||||| ||||| ||||||||| | || |||||||| || |||| |||||||| || ||
Sbjct 72 AAGGATTGTGTTAGTTCCAGTTGCTGCACAAGGTCACGTTACTCAAATGATGCAGCTTGG 131
Query 151 AAAAGCTCTTCACTCA-AAGGGTTTCTCCATCACTGTTGTTCTGACACAGTCT-AATCGA 208
|||||| ||||| | | || || ||||| || ||||| | || || ||||| | | | |
Sbjct 132 AAAAGCCCTTCAGTTACAA-GGCTTCTCAATTACTGTAGCTCAGAGACAGT-TGACGCAA 189
Query 209 GTTAGC-TCT--TC-CAAAGACTTCTCTGATTTCCA-TTTCCTCACCATCCCAG-GCAGC 262
| ||| ||| || ||| ||| ||| ||| | ||| ||||||| |||| | |||
Sbjct 190 ATAAGCTTCTCATCGCAACTTTTTC-CTGGTTTTGACTTT-GTCACCATACCAGAG-AGC 246
Query 263 TTAACTGAGTCTG-ATCTCCAA-AACCTAGGACCA-CAAAAGTTTGTGCTCAAGCTCAAT 319
||| || |||||| |||| || || ||||||||| | ||| | || | ||||| ||
Sbjct 247 TTACCTCAGTCTGAATCT--AAGAAACTAGGACCAGC-TGAGTATCTGATGAAGCTTAA- 302
Query 320 C-AAATTTGTGAGGCAAGCTTCAAGCAGTGTATAGGTCAACTATTGCATG-AACAATGTA 377
| ||| | ||||||||||||||| |||||||| |||| ||||| ||| ||||| |
Sbjct 303 CAAAACAAGCGAGGCAAGCTTCAAGGAGTGTATAAGTCAGTTATTG-ATGCAACAA-G-- 358
Query 378 ATAATGATATTGCTTGTGTCGTCTACGATGAG-TACATGTACTTCTCTCATGCTGCAG-T 435
|||||||| || ||| || |||| || || | |||||||| | ||| ||||||| |
Sbjct 359 GCAATGATATAGCATGTATCATCTATGACAAGCT-TATGTACTTTTGTCAAGCTGCAGCT 417
Query 436 AAAAGAGTTTCAA-CTTCCTAGTGTCGTCTTTAGCACGA-CAAGTGCTACTGCTT-TTGT 492
||||||||| || |||||||||||| | || || || | | |||||||| || ||
Sbjct 418 -AAAGAGTTT-AAGCTTCCTAGTGTCATATTCAGTACTAGC-AGTGCTAC-AATTCAAGT 473
Query 493 CTGTC-GCTCTGTTTTGTCTAGAGTCAACGCAGAGTCGTTCTTGATCGACATGAAAGATC 551
|| | || |||||| || | |||| || ||| |||||||||||||||||||||||
Sbjct 474 TTG-CTACTGTGTTTTAAGTAAACTCAATGCCGAGAAGTTCTTGATCGACATGAAAGATC 532
Query 552 CTGAAACACAAGACAAAGTATTTCCAGGGTTGCATCCTCTGAGGTACAAGGATC-TACCA 610
|||||| |||||||| ||||| ||| ||||||||| | || ||||| || | |||||
Sbjct 533 CTGAAATGCAAGACAAGGTATTGGAAGGTTTGCATCCTTTAAGATACAAAGA-CTTACCA 591
Query 611 ACTTCAGTATTTGGGCCAATAGAGAGTAC-GCTCAAGGTTTACAGTGAGACT-GTGAACA 668
||||||| |||||| ||| ||| || || | || | | || || | | || ||||
Sbjct 592 ACTTCAGGATTTGGACCATTAG-GACCACTTTTGGAGATGTGTAGGGA-AGTAGTTAACA 649
Query 669 CTCGAACAGCTTCCGCTGTTATCATCAACT-CAGCAAGCTGTTTAGAGAGCTCATCTTTG 727
|||||||||||||| |||||||||| | | || |||||| ||||||||| |||| ||
Sbjct 650 AAAGAACAGCTTCCGCTATTATCATCAA-TACTGCGAGCTGTCTAGAGAGCTTATCTCTG 708
Query 728 GCAAGGTTGCAACAACAAC-TGCAAGTTCCGGTGTATC-CTA-TAGGCCCACTTCATATT 784
|| || |||||||| ||| || || |||| || || | | | ||||||| ||||| |||
Sbjct 709 TCATGGCTGCAACAAGAACTTGGAA-TTCCAGTTTA-CGC-ATTAGGCCCTCTTCACATT 765
Query 785 ACAGCTTCAGCGCCT---TCTAGTTTACTAG-AAGAAGACAGGAGTTGCGTTGAGTGGTT 840
||||||||| ||||| | | |||||| | |||| |||| ||| || ||||| ||| |
Sbjct 766 ACAGCTTCATCGCCTGGACCGACTTTACT-GCAAGAGGACAAGAGCTGTGTTGAATGGCT 824
Query 841 GAACAAGCAAAAATCAAATTCAGTTATTTACATAAGCTTGGGAAGCTTGGCTCTA-ATGG 899
||||||||| ||| ||| ||||| || |||||| ||||||||||| |||| | ||||
Sbjct 825 GAACAAGCAGAAACCAAGGTCAGTGATATACATATGCTTGGGAAGCAAAGCTC-ACATGG 883
Query 900 ACACCAAAGACATGTTGGAGATGGCTTGGGGATTAAGTAATAGCAACCAACCTTTCTTAT 959
| |||| || ||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct 884 AAACCATGGAGATGTTAGAGATGGCTTGGGGGTTGTGTAATAGCAACCAACCTTTCTTAT 943
Query 960 GGGTGGTCAGACCGGGCTCTATTC-CGGGGTCAGAATGGA-CAGAGTCCTTACCAGAGGA 1017
|||| || |||| |||||| | | | || || || |||| | ||||| || ||||||||
Sbjct 944 GGGTCATCCGACCTGGCTCTGT-CGCTGGCTCCGAGTGGATC-GAGTCATTGCCAGAGGA 1001
Query 1018 ATTCAATAGGTTGGTTTCAGAAAGAGGTTACATTGTGAAATGGGCTCCGCAGATGGAAGT 1077
| ||| || | |||| ||| ||||| ||||||||||||||||| || || || |||||
Sbjct 1002 AATCAGTAAGATGGTCAAAGATAGAGGGTACATTGTGAAATGGGCACCTCAAATAGAAGT 1061
Query 1078 TCTCAG-ACATCCTGCAGTAGGAGGGTTTTGGAGTCACTGTGGATGGAACTCAACAGTAG 1136
|| || |||||||||||| ||||| || ||||| ||||||||||||||||||||| | |
Sbjct 1062 ACT-AGGACATCCTGCAGTGGGAGGCTTCTGGAGCCACTGTGGATGGAACTCAACACTTG 1120
Query 1137 AGAGCATCGGGGAAGGAGTTCCGATGATATGTAGGCCTTTCACCGGG-GATCAGAAAGTC 1195
|||| || | ||||||||| || ||||| |||||||||||| | || || ||||| ||
Sbjct 1121 AGAGTATTGCGGAAGGAGTCCCAATGATTTGTAGGCCTTTC-CAAGGCGAACAGAA-GTT 1178
Query 1196 AA-TGCGAGGTACT-TAGAGAGAGTTTGGAGAATTGGGGTTCAA-TTGGAGG-GAGATCT 1251
|| ||| | ||| | |||| || ||||||||||| ||| ||| || |||| || | |
Sbjct 1179 AAATGCAATGTA-TATAGAAAGTGTTTGGAGAATAGGGATTCTGCTTCGAGGTGA-AG-T 1235
Query 1252 GGATAAAGAAACTGTG--GAGAGAGCTGTAGA-GTGGTTGCTTGTGGATGAAGAAGGAGC 1308
|| || || | ||| ||||||||||| || | ||||| | ||||||||||||| ||
Sbjct 1236 GGG-AA-GAGGCGGTGTAGAGAGAGCTGT-GAAGAGGTTGATCATGGATGAAGAAGGTGC 1292
Query 1309 AGAAATGAGGAAGAGAGC-CATTGACTTGAAAGAAAAGATTGAAA-CCTCTGTTAGAAGT 1366
|| ||||||| |||| || | |||| || ||||| ||| | ||| ||||||| ||||||
Sbjct 1293 AGGAATGAGGGAGAGGGCTC-TTGATTTAAAAGAGAAGCTC-AAAGCCTCTGTAAGAAGT 1350
Query 1367 GGAGGTTCCTCAT 1379
||||| |||||||
Sbjct 1351 GGAGGCTCCTCAT 1363
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59306511465
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5