BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G60010.1 Length=2661 Score E Sequences producing significant alignments: (Bits) Value Ahg917747 jgi|Araly1|917747|Al_scaffold_0008_2498 4327 0.0 Ahg897391 jgi|Araly1|897391|Al_scaffold_0005_1357 1653 0.0 > Ahg917747 jgi|Araly1|917747|Al_scaffold_0008_2498 Length=2661 Score = 4327 bits (2343), Expect = 0.0 Identities = 2555/2661 (96%), Gaps = 0/2661 (0%) Strand=Plus/Plus Query 1 ATGAAAAGTAACACTCCTACGGAGGATTCAACAAAATGGATGTTAGAGAGTGTAGAGATC 60 ||||||| ||||| |||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1 ATGAAAAATAACATTCCTACCGAGGATTCGACAAAATGGATGTTAGAGAGTGTAGAGATC 60 Query 61 GATTCAATGGGTGAAAGCTCCTCAAAAGAACCCGAAATTAACCTCAACAAGAACGAAGGT 120 ||||||||||||||| | || || ||||||||||||||||||||||||||||| |||||| Sbjct 61 GATTCAATGGGTGAAGGTTCGTCCAAAGAACCCGAAATTAACCTCAACAAGAATGAAGGT 120 Query 121 GGTCTGAAGAAGAACGCGTCAAGAAATCTCGGCGTGGGATCGATAATCCGAACATTGAGC 180 |||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct 121 GGTCTGAAGAAGAATGCGTCAAGAAATCTCGGCGTGGGATCGATAATCCGAACGTTAAGC 180 Query 181 GTTTCAAACTGGAGAAAGAGCGGGAATCTAGGCTCTCCGAGCACAAGGAAAAGTGGAAAC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 181 GTTTCAAACTGGAGAAAGAGCGGGAATCTAGGCTCTCCGAGCACAAGGAAAAGTGGGAAC 240 Query 241 CTGGGGCCTCCGACCAATGCCGTGCCCAAGAAGACAGGTCCACAAAGAGTGGAGAGGACA 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CTGGGGCCTCCGACCAATGCCGTGCCCAAGAAGACAGGTCCACAAAGAGTGGAGAGGACA 300 Query 301 ACATCAAGCGCGGCTAGGGGACTTCAGAGCTTACGGTTCCTTGATCGGACAGTCACCGGA 360 ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ACATCTAGCGCCGCTAGGGGACTTCAGAGCTTACGGTTCCTTGATCGGACAGTCACCGGA 360 Query 361 CGAGAACGAGATGCATGGAGATCGATTGAGAACCGGTTCAATCAGTTCTCTGTTGATGGC 420 |||||||||||||||||||| ||||||||||| || || |||||||| ||||| |||||| Sbjct 361 CGAGAACGAGATGCATGGAGGTCGATTGAGAATCGATTTAATCAGTTTTCTGTCGATGGC 420 Query 421 AAGTTGCCTAAAGAGAAATTCGGCGTCTGCATTGGAATGGGAGACACAATGGAGTTTGCG 480 || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 421 AAATTGCCTAAAGAGAAATTCGGCGTCTGCATTGGAATGGGAGACACGATGGAGTTTGCT 480 Query 481 GCAGAAGTTTATGAAGCATTGGGTCGGAGGAGACAAATAGAGACAGAAAACGGTATTGAC 540 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 481 GCAGAAGTTTATGAGGCATTGGGTCGGAGAAGACAAATAGAGACAGAAAACGGTATCGAC 540 Query 541 AAAGAACAACTCAAGCTGTTTTGGGAAGACATGATCAAGAAAGACCTCGATTGTCGTCTT 600 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AAAGAACAACTCAAGGTGTTTTGGGAAGACATGATCAAGAAAGACCTCGATTGTCGTCTT 600 Query 601 CAGATCTTCTTCGACATGTGTGACAAAAACGGAGATGGTAAGCTGACGGAAGAGGAAGTG 660 |||||||| ||||||||||||||||| ||||||||||||||||| || |||||||||||| Sbjct 601 CAGATCTTTTTCGACATGTGTGACAAGAACGGAGATGGTAAGCTCACAGAAGAGGAAGTG 660 Query 661 AAAGAGGTCATAGTATTGAGTGCCTCGGCGAACCGCCTCGGGAATTTAAAAAAGAATGCT 720 |||||||||||||| ||||| ||||| ||||||||||| |||||||| |||||||| ||| Sbjct 661 AAAGAGGTCATAGTCTTGAGCGCCTCCGCGAACCGCCTAGGGAATTTGAAAAAGAACGCT 720 Query 721 GCAGCTTACGCATCTTTGATCATGGAAGAACTCGACCCTGATCATAAAGGATACATAGAG 780 || |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct 721 GCGGCTTACGCGTCTTTGATCATGGAAGAACTCGACCCCGATCACAAAGGATACATAGAG 780 Query 781 ATGTGGCAGTTAGAAATACTACTAACAGGAATGGTGACAAACGCTGATACGGAGAAGATG 840 |||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 781 ATGTGGCAGTTAGAGATACTATTAACAGGAATGGTGACAAACGCTGATACAGAGAAGATG 840 Query 841 AAGAAATCGCAAACGCTGACACGCGCGATGATCCCAGAGCGGTACAGAACGCCGATGAGC 900 |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 841 AAGAAATCTCAAACGCTGACACGCGCAATGATCCCAGAGCGTTACAGAACGCCGATGAGC 900 Query 901 AAGTACGTCTCCGTAACCGCGGAACTGATGCACGAGAATTGGAAAAAATTATGGGTACTC 960 || ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 901 AAATACGTTTCAGTAACCGCAGAACTGATGCACGAGAATTGGAAAAAATTATGGGTACTC 960 Query 961 GCTTTGTGGGCCATCATCAACGTCTATCTATTCATGTGGAAGTACGAAGAGTTCATGAGA 1020 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 961 GCTTTGTGGGCCATCATCAACGTTTATCTATTCATGTGGAAGTACGAAGAGTTTATGAGA 1020 Query 1021 AACCCTCTCTACAACATCACCGGACGCTGCGTTTGCGCCGCTAAAGGCGCTGCTGAAACG 1080 |||||||||||||||||||||||||||||||||||||| |||||||| || || |||||| Sbjct 1021 AACCCTCTCTACAACATCACCGGACGCTGCGTTTGCGCAGCTAAAGGTGCGGCCGAAACG 1080 Query 1081 CTGAAACTCAACATGGCTCTGATTTTGGTCCCAGTCTGTAGAAAAACCCTAACGATACTT 1140 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 1081 CTGAAACTCAACATGGCTCTGATTTTGGTCCCGGTCTGTAGAAAAACCCTAACGATCCTT 1140 Query 1141 AGGTCAACGTTCTTGAACCGTGTGGTCCCATTCGACGACAACATAAACTTCCACAAGGTG 1200 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1141 AGGTCAACGTTTTTGAACCGTGTGGTCCCATTCGACGACAACATAAACTTCCACAAGGTG 1200 Query 1201 ATTGCATATATGATCGCGTTCCAGGCTTTGCTCCACACGGCACTTCACATCTTCTGTAAC 1260 ||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct 1201 ATTGCGTATATGATCGCGTTCCAGTCTTTGCTTCACACGGCACTTCACATCTTCTGTAAC 1260 Query 1261 TACCCTAGGTTAAGCTCGTGCTCTTACGACGTGTTCTTGACGTACGCGGGTGCTGCCTTG 1320 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1261 TACCCTAGGTTAAGCTCGTGCTCTTACGACGTGTTCTTGACGTACGCGGGAGCTGCCTTG 1320 Query 1321 GGAAATACGCAACCGAGTTACCTAGGTTTAATGTTGACGTCAGTGTCGATCACGGGTGTT 1380 ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct 1321 GGAAACACGCAACCGAGTTACCTAGGTTTAATGATGACGTCAGTGTCGATCACGGGAGTT 1380 Query 1381 TTAATGATTTTCTTCATGGGATTCTCGTTTACACTGGCGATGCATTATTTTAGAAGGAAC 1440 |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1381 TTAATGATATTCTTCATGGGATTCTCGTTTACACTGGCCATGCATTATTTTAGAAGGAAC 1440 Query 1441 ATAGTGAAATTGCCTAAACCGTTTAACGTTCTTGCTGGGTTTAATGCGTTTTGGTATGCT 1500 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1441 ATAGTGAAATTGCCTAAACCGTTTAACGTTCTTGCTGGGTTTAATGCGTTTTGGTATGCT 1500 Query 1501 CATCATTTGTTGGTTCTTGCTTATATTCTTCTCATCATCCATGGTTACTATCTTATCATC 1560 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1501 CATCATTTGTTGGTTCTTGCTTATATTCTTCTCATCATCCATGGTTACTATCTTATCATC 1560 Query 1561 GAGAAGCCTTGGTACCAGAAGACGACATGGATGTATTTGGCCGTGCCGATGTTGTTCTAC 1620 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1561 GAGAAGCCTTGGTACCAGAAGACGACATGGATGTATTTGGCCGTGCCGATGCTGTTCTAC 1620 Query 1621 GCGAGTGAGAGGCTATTCTCACGTCTCCTTCAAGAACACAGCCATCGTGTCAACGTTATT 1680 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1621 GCGAGTGAGAGGCTATTCTCACGTCTCCTTCAAGAACACAGCCATCGTGTCAACGTTATT 1680 Query 1681 AAGGCTATTGTATATTCGGGGAACGTTCTTGCACTTTATGTTACAAAACCTCCCGGATTC 1740 |||||||||||||||||||| ||||||||||||||||| || || |||||||| |||||| Sbjct 1681 AAGGCTATTGTATATTCGGGCAACGTTCTTGCACTTTACGTAACCAAACCTCCTGGATTC 1740 Query 1741 AAATACAAAAGTGGCATGTACATGTTTGTCAAGTGTCCAGATCTCTCAAAATTTGAATGG 1800 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1741 AAATACAAAAGTGGCATGTACATGTTTGTCAAGTGTCCTGATCTCTCAAAATTTGAATGG 1800 Query 1801 CATCCATTCTCCATCACTTCTGCACCAGGAGATGACTATTTAAGTGTTCACATTAGAGCC 1860 ||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1801 CATCCGTTCTCAATCACTTCTGCACCAGGAGATGATTATTTAAGTGTTCACATTAGAGCC 1860 Query 1861 TTAGGAGATTGGACCACTGAACTTAGGAGCAGATTTGCAAAGACATGCGAGCCTACTCAA 1920 || |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct 1861 TTGGGAGATTGGACCACTGAACTTAGGAGCAGATTCGCAAAGACATGCGAGCCTCCTCAA 1920 Query 1921 GCAGCCGCTAAACCTAAACCAAACAGTCTTATGAGGATGGAAACAAGAGCTGCGGGTGTG 1980 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1921 GCAGCCGCAAAACCTAAACCAAACAGTCTTATGAGGATGGAAACAAGAGCTGCGGGTGTG 1980 Query 1981 AATCCTCACATTGAAGAATCACAAGTCTTGTTCCCAAAAATATTCATCAAAGGACCGTAT 2040 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 1981 AATCCTCACATTGAAGAATCACAAGTCTTATTCCCAAAAATATTCATCAAAGGACCTTAT 2040 Query 2041 GGAGCTCCGGCACAAAATTATCAGAAGTTCGACATCCTCTTACTAGTTGGGCTAGGGATT 2100 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 2041 GGAGCTCCGGCACAAAATTATCAGAAGTTCGATATCCTCTTACTAGTTGGACTAGGGATA 2100 Query 2101 GGGGCAACTCCATTCATAAGCATTTTGAAGGACATGTTAAACCATCTGAAACCCGGAATT 2160 ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||| Sbjct 2101 GGGGCAACTCCATTCATAAGCATTTTGAAAGACATGTTAAACCATCTAAAACCTGGGATT 2160 Query 2161 CCCAGAAGTGGGCAAAAGTACGAAGGAAGTGTAGGAGGAGAGAGTATAGGAGGTGATAGT 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2161 CCCAGAAGTGGGCAAAAGTACGAAGGAAGTGTAGGAGGAGAGAGTATAGGAGGTGATAGT 2220 Query 2221 GTTAGTGGTGGAGGAGGCAAGAAGTTTCCTCAAAGAGCATAttttttttGGGTGACAAGA 2280 |||||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 2221 GTTAGTGGCGGAGGAGGAAAGAAGTTTCCGCAAAGAGCATATTTTTTTTGGGTGACAAGA 2280 Query 2281 GAACAAGCTTCCTTTGATTGGTTCAAGGGAGTTATGGATGACATCGCAGAGTATGATAAA 2340 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2281 GAACAAGCTTCCTTTGATTGGTTCAAGGGAGTTATGGATGACATCGCCGAGTATGATAAA 2340 Query 2341 ACCCATGTAATAGAAATGCATAACTACTTAACAAGCATGTACGAAGCTGGAGATGCAAGA 2400 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2341 ACCCATGTGATAGAAATGCATAACTACTTAACAAGCATGTACGAAGCGGGAGATGCAAGA 2400 Query 2401 TCTGCCCTTATCGCCATGGTTCAGAAACTTCAACATGCCAAGAACGGTGTTGATATTGTC 2460 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2401 TCTGCCCTAATCGCCATGGTTCAGAAACTTCAACATGCCAAGAACGGTGTTGATATTGTC 2460 Query 2461 TCCGAAAGCCGGATACGAACACATTTTGCAAGACCTAATTGGAGGAAGGTTTTTTCTGAA 2520 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2461 TCCGAAAGCCGGATACGAACACATTTCGCAAGACCTAATTGGAGGAAGGTTTTTTCTGAG 2520 Query 2521 TTGTCAAGCAAACACGAAGCTTGTCGAATAGGTGTATTCTACTGTGGAAGTCCAACACTG 2580 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2521 TTATCAAGCAAACACGAAGCTTGTCGAATAGGTGTATTCTACTGTGGAAGTCCAACACTG 2580 Query 2581 GTTCGACCACTTAAAGAACTCTGTCAGGAGTTTAGTCTCGAGTCATCCACTCGTTTTACT 2640 |||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| Sbjct 2581 GTTCGACCACTTAAAGAACTTTGTCAGGAGTTTAGTCTCGAGTCTTCCACTCGTTTTACT 2640 Query 2641 TTCCACAAGGAAAATTTTTAA 2661 |||||||||||||| |||||| Sbjct 2641 TTCCACAAGGAAAACTTTTAA 2661 > Ahg897391 jgi|Araly1|897391|Al_scaffold_0005_1357 Length=2739 Score = 1653 bits (895), Expect = 0.0 Identities = 1744/2147 (81%), Gaps = 86/2147 (4%) Strand=Plus/Plus Query 129 GAAGAACGCGTC-AAGAAATCTCGGCGTGGGATCGATAATC-CGAACATTGAGCGT-TTC 185 |||||| | ||| ||| ||||| |||||||||||||||||| | || |||| || | Sbjct 156 GAAGAATGTGTCTAAG-AATCTTGGCGTGGGATCGATAATCAGGTCCA-TGAGTGTAAAC 213 Query 186 AAACTGGAGAAAGAGCGGGAATCT-AGGCTCTCCGAGCACAAGGAAAAGTGGAAACCTGG 244 ||| |||||||||||||| ||||| ||| | |||||||| ||||| ||||||||| ||| Sbjct 214 AAA-TGGAGAAAGAGCGGTAATCTCGGGC-CCCCGAGCACGAGGAAGAGTGGAAACTTGG 271 Query 245 GGCCTCCGACCAATGCC--GTGCCCAAG----AAGA-CAGGTCCACAAAGAGTGGAGAGG 297 |||||||| | | || |||||||| |||| | || ||||||||||| |||||| Sbjct 272 GGCCTCCG--C--TCCCTATTGCCCAAGAAAAAAGACCGGGGCCACAAAGAGTCGAGAGG 327 Query 298 ACAACATCAAGCGCGGCTAGGGGACTTCAGAGCTTACGGTTCCTTGATCGGACAGTCACC 357 || ||||| || |||||||| ||||| || ||| ||||||||||||||||||| ||||| Sbjct 328 ACTACATCTAGTGCGGCTAGAGGACTACAAAGCCTACGGTTCCTTGATCGGACTGTCACA 387 Query 358 GGACGAGAACGAGATGCATGGAGATCGATTGAGAACCGGTTCAATCAGTTCT-CTGTTGA 416 ||||| ||||| ||| | |||||||| || ||||||||||||||||| || | | ||||| Sbjct 388 GGACGGGAACGGGATTCGTGGAGATCAATCGAGAACCGGTTCAATCAATT-TGCCGTTGA 446 Query 417 TGGCAAG-TTGCCTAAAGAGAAATTCGGCGTCTGCATTGGAATGGGAGACACAATGGAGT 475 || | | || || || || |||||||| || ||||||||||||||||| ||| |||||| Sbjct 447 CGGGAGGCTT-CCCAAGGATAAATTCGGTGTTTGCATTGGAATGGGAGATACATTGGAGT 505 Query 476 TTGCGGCAGAAGTTTATGAAGCATTGGGTCGGAGGAGACAAATAGAGACAGAAAACGGTA 535 ||||||||||||| ||||||||||||||| |||| ||||||||| | |||||||| || | Sbjct 506 TTGCGGCAGAAGTATATGAAGCATTGGGTAGGAGAAGACAAATAAACACAGAAAATGGGA 565 Query 536 TTGACAAAGAACAACTCAAGCTGTTTTGGGAAGACATGATCAAGAAAGACCTCGATTGTC 595 |||| || |||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct 566 TTGATAAGGAACAACTCAAGCTTTTTTGGGAAGACATGATCAAGAAAGATCTCGACTGTC 625 Query 596 GTCTTCAGATCTTCTTCGACATGTGTGACAAAAACGGAGATGGTAAGCTGACGGAAGAGG 655 | || |||||||||||||||||||||||||| | ||||| || ||| | || ||||||| Sbjct 626 GCCTCCAGATCTTCTTCGACATGTGTGACAAGGATGGAGACGGGAAGTTAACAGAAGAGG 685 Query 656 AAGTGAAAGAGGTCATAGTATTGAGTGCCTCGGCGAACCGCCTCGGGAATTTAAAAAAGA 715 |||| |||||||||||||| |||||||| || |||||| | |||| ||| |||| |||| Sbjct 686 AAGTTAAAGAGGTCATAGTCTTGAGTGCATCAGCGAACAGGCTCGCTAATCTAAAGAAGA 745 Query 716 ATGCTGCAGCTTACGCATCTTTGATCATGGAAGAACTCGACCCTGATCATA-AAGGATAC 774 |||||||| |||| || |||||||||||||||||||||||||| || || | | || ||| Sbjct 746 ATGCTGCATCTTATGCTTCTTTGATCATGGAAGAACTCGACCCCGACCA-ACACGGTTAC 804 Query 775 ATAGAGATGTGGCAGTTAGAAATACTACTAACAGGAATGGTGA-CAAACGCTGA-T-AC- 830 || ||||||||||| | || | || |||||||||| || | |||||||||| | || Sbjct 805 ATTGAGATGTGGCAACTCGAGGTGTTATTAACAGGAATTGT-ATCAAACGCTGAGTCACA 863 Query 831 GGAGAAGATGAAGAAATCGCAAAC-GCTGACACGCGCGATGATCCCAGAGCGGTACAGAA 889 || | ||| |||||||| ||| ||| || || || ||||||||| | || ||||||| Sbjct 864 TAAGGTGGTGAGGAAATCGC-AACAGCTAACGCGAGCCATGATCCCAAAACGTTACAGAA 922 Query 890 CGCCGA-TGAGCAAGTACGTCTCCGTAACCGCGGAACTGATGCACGAGAATTGGAAAAA- 947 | |||| | || || ||||| || |||||||| || || ||| ||||| | |||||||| Sbjct 923 CACCGACT-AGTAAATACGTTTCAGTAACCGCCGAGCTAATGTACGAGCACTGGAAAAAG 981 Query 948 ATTATGGGTAC-TCGCTTTGTGGGC-CATCA-TCAACGTCTATCTATTCATGTGGAAGTA 1004 ||| ||||| | | | |||| ||| | || | |||| | || ||||| ||||| || Sbjct 982 ATT-TGGGT-CGTTACATTGT-GGCTC-GCAGTAAACGCCGCCCTCTTCATATGGAAATA 1037 Query 1005 CGAAGAGTTCATGAGAAACCCTCTCTACAACATCACCGGACGCTGCGTTTGCGCCGCTAA 1064 ||||||||||| | || |||||| ||||||||||||||||||||| |||||||||| || Sbjct 1038 CGAAGAGTTCACCACAAGCCCTCTTTACAACATCACCGGACGCTGCCTTTGCGCCGCGAA 1097 Query 1065 AGGCGCTGCTGAAACGCTGAAACTCAACATGGCTCTGATTTTGGTCCCAGTCTGT-AGAA 1123 ||| |||| |||| || ||||||||||||||| |||| |||||||| || | | |||| Sbjct 1098 AGGAACTGCGGAAATACTAAAACTCAACATGGCTTTGATCTTGGTCCCTGT-TTTAAGAA 1156 Query 1124 AAACCCTAACGATACTTAGGTCAACGTTCTTGAACCGTGTGGTCCCATTCGACGACAACA 1183 |||||| ||| | || || || || ||||||| || || |||| ||||| || |||| Sbjct 1157 GAACCCTTACGTTCCTCAGATCGACTTTCTTGAGCCACCTGATCCCGTTCGATGATAACA 1216 Query 1184 TAAACTTCCACAAGGTGATTG-CATATATGATCGC-GTTCCA-GGCTTTGCTCCACACGG 1240 | |||||| | ||| |||| | | | ||| || ||| | | ||||||||||||| Sbjct 1217 TCAACTTCTATAAGTTGATAGCCGT-GGCGATAGCGGTT--ATTTCCTTGCTCCACACGG 1273 Query 1241 CACTTCACAT-CTTCTGTAACTACCCTAGGTTAAGCT-CGTGCTCTTACGACGTGTTCT- 1297 |||| ||||| | | || ||||| |||||| |||| | | ||| || |||| ||| || Sbjct 1274 CACTACACATGC-TATGCAACTATCCTAGGCTAAG-TGCTTGCCCTAACGATTTGTACTA 1331 Query 1298 TGACGTACGCGGGTGCTGC-CTTGGGAAAT-ACGCAACCGAGTTACCTAGGTTTAATGTT 1355 ||| |||||||| | | |||||| | | |||||||| || ||||| ||||| | Sbjct 1332 TGA-TTACGCGGGAAAT-CTCTTGGG-GTTCATGCAACCGACCTATTTAGGTCTAATGCT 1388 Query 1356 GACGTCAGTGTCGATCACGGGTGTTTTAATGATTTTCTTCATGGGAT-TCTCGTTTACAC 1414 ||| | || ||| |||| || ||| ||||||| |||||||||| | |||| || || | Sbjct 1389 GACCCCGGTTTCGGTCACAGGAGTTCTAATGATCATCTTCATGGG-TATCTCATTCACGC 1447 Query 1415 TGGCGATGCATTATTTTAGAAGGAACATAGTGAAATTGCCTAAACCGTTTAA-CGTTCTT 1473 | || |||||||| || ||||| ||||||||||||||||||||||||||||| || |||| Sbjct 1448 TTGCTATGCATTACTTCAGAAGAAACATAGTGAAATTGCCTAAACCGTTTAACCG-TCTT 1506 Query 1474 GCTGGGTTTAATGCGTTTTGGTATGCTCATCATTTGTTGGTTCTTGCTTATATTCTTCTC 1533 ||||| |||||| ||||||||||||||||||||||| ||||| |||| ||| |||||| Sbjct 1507 GCTGGATTTAATTCGTTTTGGTATGCTCATCATTTGCTGGTTATTGCCTATGCTCTTCTT 1566 Query 1534 ATCATCCATGGTTACTA-TCTTATCATCGAGAAGCCTTGGTACCAGAAGACGACATGGAT 1592 ||||| ||||||||| | ||||||||||||||||||||||||||| || ||||||||||| Sbjct 1567 ATCATTCATGGTTAC-ATTCTTATCATCGAGAAGCCTTGGTACCAAAAAACGACATGGAT 1625 Query 1593 GTATTTGGCCGTGCCGATGTTGTTCTACGCGAGTGAGAGGCTATTCTCACGTCTCCTTCA 1652 ||| ||||| | || ||| |||| |||||||| |||||||| |||||| | |||| Sbjct 1626 GTACGTGGCCATACCAATGGTGTTGTACGCGAGCGAGAGGCTTTTCTCAAG---AGTTCA 1682 Query 1653 AGAACACAGCCATCGTGTCAACGTTATTAAGGCTATTGTATATTCGGGGAACGTTCTTGC 1712 |||||||| |||||||||| | |||| ||||||||||||||||| || || |||||||| Sbjct 1683 AGAACACAACCATCGTGTCCATATTATAAAGGCTATTGTATATTCAGGCAATGTTCTTGC 1742 Query 1713 ACTTTATGTTACAAAACCTCCCGGATTCAAATACAAAAGTGGCATGTACATGTTTGTCAA 1772 ||| ||| | |||||||||| || ||||| ||||||||||||||||||||||||||||| Sbjct 1743 ACTCTATATGACAAAACCTCAAGGGTTCAAGTACAAAAGTGGCATGTACATGTTTGTCAA 1802 Query 1773 GTGTCCAGATCTCTCAAAATTTGAATGGCATCCATTCTCCATCACTTCTGCACCAGGAGA 1832 |||||| ||| |||| ||||| |||||||||||||||||| ||||||||||||| ||||| Sbjct 1803 GTGTCCTGATATCTCCAAATTCGAATGGCATCCATTCTCCGTCACTTCTGCACCCGGAGA 1862 Query 1833 TGACTATTTAAGTGTTCACATTAGAGCCTTAGGAGATTGGACCACTGAACTTAGGAGCAG 1892 ||| ||||| || |||||||| ||||| ||||||||||||||| |||||||||||| ||| Sbjct 1863 TGAATATTTGAGCGTTCACATAAGAGCATTAGGAGATTGGACCTCTGAACTTAGGAACAG 1922 Query 1893 ATTTGCAAAGACATGCGAGCCT-ACTCAAGCAGCCGCTAAACCTAAACCAAACAGTCTTA 1951 ||||||| ||||||| |||||| | |||| || | | ||||||| ||||| ||||||| Sbjct 1923 ATTTGCAGAGACATGTGAGCCTCA-TCAAACATC-G--AAACCTAGTCCAAATAGTCTTA 1978 Query 1952 TGAGGATGGAAACAAGAGCTGCG-GGTGTGAATCCTCACATTGAAGAATCACAAGTCTTG 2010 | ||||||||||||||||| | | |||| ||||||||| ||||||||||||||| ||| Sbjct 1979 TTAGGATGGAAACAAGAGC-GAGAGGTGCAAATCCTCACGTTGAAGAATCACAAGCCTTA 2037 Query 2011 TTCCCAAAAATATTCATCAAAGGACCGTATGGAGCTCCGGCACAAAATTATCAGAAGT-T 2069 || |||| ||| || ||||||||||| || ||||||||||||||||| |||||||||| | Sbjct 2038 TTTCCAAGAATTTTTATCAAAGGACCATACGGAGCTCCGGCACAAAACTATCAGAAGTAT 2097 Query 2070 CGACATCCTCTTACT-AGTTGGGCTAGGGATTGGGGCAACTCCATTCATAAGCATTTTGA 2128 || ||||| || | | ||||||||||||| |||||||| ||||| ||||| || | | Sbjct 2098 -GATATCCTTTTGTTGA-TTGGGCTAGGGATAGGGGCAACCCCATTTATAAGTATCCTAA 2155 Query 2129 AGGACATGTTAAACCATCTGAAACCCGGAATTCCCAGAAGT-GGGCAAAAGTACGAAGGA 2187 | |||||||| ||| |||| ||||| || ||||| ||| | ||||||||||| |||||| Sbjct 2156 AAGACATGTTGAACAATCTCAAACCTGGTATTCCAAGA-GCCGGGCAAAAGTATGAAGGA 2214 Query 2188 AGTGTAGGAGGAGAGAG-TATAGGAGG-TGATAGTGTTAGTGGTGGA 2232 ||||||||||| ||||| | ||||||| | | ||||| | ||| ||| Sbjct 2215 AGTGTAGGAGGTGAGAGCT-TAGGAGGATCA-AGTGTAAATGGAGGA 2259 Score = 523 bits (283), Expect = 2e-147 Identities = 382/431 (89%), Gaps = 2/431 (0%) Strand=Plus/Plus Query 2228 GTGGAGGAGGCAAGAAGTTTCCTCAAAGAGCATAttttttttGGGTGACAAGAGAACAAG 2287 |||||||||| | ||||||||| |||||||||||||||| ||||||||||||||||||| Sbjct 2306 GTGGAGGAGGTAGGAAGTTTCCACAAAGAGCATATTTTTACTGGGTGACAAGAGAACAAG 2365 Query 2288 CTTCCTTT-GATTGGTTCAAGGGAGTTATGGATGACATCGCAGAGTATGATAAAACCCAT 2346 ||| |||| || |||||||| |||||||||||||| || |||| |||||| |||||| || Sbjct 2366 CTT-CTTTCGAATGGTTCAAAGGAGTTATGGATGATATTGCAGTGTATGACAAAACCAAT 2424 Query 2347 GTAATAGAAATGCATAACTACTTAACAAGCATGTACGAAGCTGGAGATGCAAGATCTGCC 2406 || ||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 2425 GTGATAGAGATGCATAACTACTTAACAAGTATGTACGAAGCAGGAGATGCAAGATCTGCT 2484 Query 2407 CTTATCGCCATGGTTCAGAAACTTCAACATGCCAAGAACGGTGTTGATATTGTCTCCGAA 2466 || || || ||||| |||||||||||||||||||| || |||||||| ||||| ||||| Sbjct 2485 CTAATTGCTATGGTCCAGAAACTTCAACATGCCAAAAATGGTGTTGACATTGTGTCCGAG 2544 Query 2467 AGCCGGATACGAACACATTTTGCAAGACCTAATTGGAGGAAGGTTTTTTCTGAATTGTCA 2526 ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2545 AGCCGAATACGAACCCATTTCGCAAGACCTAATTGGAGGAAGGTTTTTTCTGAATTGTCA 2604 Query 2527 AGCAAACACGAAGCTTGTCGAATAGGTGTATTCTACTGTGGAAGTCCAACACTGGTTCGA 2586 ||||| |||||| ||| ||| |||||||| |||||||||||||||||||| || |||||| Sbjct 2605 AGCAAGCACGAAACTTCTCGCATAGGTGTGTTCTACTGTGGAAGTCCAACGCTTGTTCGA 2664 Query 2587 CCACTTAAAGAACTCTGTCAGGAGTTTAGTCTCGAGTCATCCACTCGTTTTACTTTCCAC 2646 ||||| ||| || ||||||||||| ||||||||||| ||||| || |||||||||||| Sbjct 2665 CCACTAAAATCCCTTTGTCAGGAGTTCAGTCTCGAGTCGTCCACCCGCTTTACTTTCCAC 2724 Query 2647 AAGGAAAATTT 2657 || || ||||| Sbjct 2725 AAAGAGAATTT 2735 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 100367795575 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5