BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G60120.2 Length=2297 Score E Sequences producing significant alignments: (Bits) Value Ahg497236 jgi|Araly1|497236|fgenesh2_kg.71__6__AT5G60120.1 1768 0.0 Ahg496151 jgi|Araly1|496151|fgenesh2_kg.8__1967__AT5G60120.1 1762 0.0 Ahg905670 jgi|Araly1|905670|Al_scaffold_0003_2798 654 0.0 Ahg950765 jgi|Araly1|950765|scaffold_802652.1 189 8e-47 > Ahg497236 jgi|Araly1|497236|fgenesh2_kg.71__6__AT5G60120.1 Length=1784 Score = 1768 bits (957), Expect = 0.0 Identities = 1235/1357 (91%), Gaps = 68/1357 (5%) Strand=Plus/Plus Query 154 TCCATGTCTCCTCAATCTCATTTCTCTCCTTAGTGATTGAGCTTTTTCCTTCTTTCTCTT 213 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct 39 TCCATGTCTCCTCAATCTCGTTTCTCTCCTTAGTGATCGAGC-TTTTCCTTCTTTCTC-- 95 Query 214 TGGTTATTATTCCTTCTCCTCCTCCGTCGTGTTTTTGATTGATTTCAGAATCTAAATCTC 273 | || |||||| | |||| | | || ||||||||||||||||||| Sbjct 96 T-GTAATTATT--AT-TCCT--T-C-TC------------CATTTCAGAATCTAAATCTC 135 Query 274 -C-G-TTTGATTTCTCCATACTCGTGCTGATTTTCACCTATGTAATGTGATTTATGAGCT 330 | | ||| |||| ||||||| | | | ||||||| || ||| |||||||||| |||||| Sbjct 136 TCTGATTT-ATTTTTCCATACACTTACAGATTTTCTCCGATGAAATGTGATTTTTGAGCT 194 Query 331 CTGTTTATTTCAAATCGACGGCGATCGTTG-AATTTATTGATCAATGTGTAAGTAAGAGC 389 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 195 CTGTTTATTTCAAATCGACGGCGATCGTTGAAATTTATTGATCAATGTGTAAGTAAGAGC 254 Query 390 TTGAAGAAATAgtttttgttgttgttgtgaaagctcagagttttgtttgcttttttgttg 449 ||||||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct 255 TTGAAGAAATA------GTTGTTGTTGT------T----GTTTTGTTTACTTTTTTGTTG 298 Query 450 acttttttgAGATTGATGCTGGATCTCAATCTCGACGTCGACTCGACCGAGTCTACTCAG 509 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 299 AC-TTTTTGAGATTGATGCTGGATCTCAATCTCGACGTCGACTCGGCCGAGTCTACTCAG 357 Query 510 AACGAACGAGATTCGATTACTGTTAAAGGGGTTTCTTTGAATCAGATGGATGAATCGGTG 569 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 358 AACGAACGAGATTCGGTTACTGTTGAAGGGGTTTCTTTGAATCAGATGGATGAATCAGTG 417 Query 570 ACGTCGAACTCTTCTGTTGTTAATGCTGAAGCTTCTAGCTGTATAGATGGTGAAGATGAG 629 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 418 ACGTCGAACTCTTCTGTTGTTAATGCTGAAGCTTCTAGCTGCATAGATGGTGAAGATGAG 477 Query 630 TTGTGCTCTACACGAACGGTCAAGTTTCAATTTGAGATACTGAAAGGA-G-GAGG-agaa 686 ||||| ||||||||||| ||||||||||||||||||||||| |||||| | |||| |||| Sbjct 478 TTGTGTTCTACACGAACCGTCAAGTTTCAATTTGAGATACTAAAAGGAGGAGAGGAAGAA 537 Query 687 gaagaagaagaagatgatgatgaaagaagTGCTGTGATGATGACTAAGGAGTTTTTTCCT 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 538 GAAGAAGAAGAAGATGATGATGAAAGAAGTGCTGTGATGATGACTAAGGAGTTTTTTCCT 597 Query 747 GTTGCTAAAGGCATGAACTTTATGGATTCGAGCGCTCAAAGTTCAAGGAGCACCGTTGAT 806 ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| Sbjct 598 GTTGCTAAAGGCATGAATTTTATGGATTCGAGCGCACAAAGTTCCAGGAGCACCGTTGAT 657 Query 807 ATTTCCTTCCAGAGGGGGAAACAAGGTGGAGACTTTATAGGTAGCGGGAGCGGTGGTGGC 866 |||||||||||||| ||||||||||| |||||| || | ||| || | Sbjct 658 ATTTCCTTCCAGAGAGGGAAACAAGGCGGAGAC-TT-T-GGT-------GC--------C 699 Query 867 GATGCTTCACGGGTGATGCAGCCACCATCACAGCCGGTGAAGAAAAGCAGGAGAGGTCCT 926 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 700 GATGCTGCACGGGTGATGCAGCCACCATCACAGCCGGTGAAGAAAAGCAGGAGAGGTCCT 759 Query 927 AGGTCTAAGAGTTCTCAGTATAGAGGCGTCACTTTCTATCGGAGGACAGGCAGATGGGAA 986 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 760 AGGTCTAAGAGTTCGCAGTATAGAGGCGTCACTTTCTATCGGAGGACAGGGAGATGGGAA 819 Query 987 TCGCATATCTGGGATTGCGGTAAACAAGTTTATTTAGGTGGATTTGATACTGCCCATGCT 1046 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 820 TCGCATATCTGGGATTGCGGTAAACAAGTTTATTTAGGTGGATTTGATACTGCCCATGCT 879 Query 1047 GCAGCTAGGGCGTATGATCGAGCTGCTGTCAAATTCCGGGGTCTGGAAGCTGACATCAAT 1106 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 880 GCAGCTAGGGCGTATGATCGAGCTGCTGTCAAGTTCCGGGGTCTGGAGGCTGACATCAAT 939 Query 1107 TTCGTTATTGGCGATTATGAAGAGGATCTCAAGCAGATGGCGAATCTTTCCAAAGAGGAA 1166 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 940 TTCATTATCAGCGATTATGAAGAGGATCTCAAGCAGATGGCGAATCTTTCCAAAGAGGAA 999 Query 1167 GTTGTGCAAGTACTTCGGCGACAGAGCTCTGGTTTCTCAAGGAATAATTCTAGATATCAA 1226 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 1000 GTTGTGCAAGTACTTCGGCGACAGAGCTCTGGTTTCTCAAGGAATAACTCAAGATATCAA 1059 Query 1227 GGAGTTGCTTTGCAAAAGATTGGCGGGTGGGGAGCTCAAATGGAGCAGCTTCATGGAAAC 1286 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1060 GGAGTTTCTTTGCAAAAGATTGGCGGGTGGGGAGCTCAAATGGAGCAGTTTCATGGAAAC 1119 Query 1287 ATGGGTTGTGACAAGGCAGCCGTACAATGGAAGGGAAGGGAAGCTGCTTCCTTAATTGAG 1346 |||| || ||||||||||||| |||||||||| ||||||||||| ||||||||||||||| Sbjct 1120 ATGGCTTCTGACAAGGCAGCCATACAATGGAATGGAAGGGAAGCGGCTTCCTTAATTGAG 1179 Query 1347 CCTCATGCATCCCGAATGATTCCCGAGGCAGCTAATGTTAAGCTCGACCTCAACTTGGGA 1406 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1180 CCTCATGCATCCCGGATGATTCCCGAGGCAGCTAATGTTAAGCTCGACCTCAACTTGGGA 1239 Query 1407 ATCTCTCTTTCACTAGGAGATGGTCCGAAGCAAAAAGATAGGGCCCTCCGGCTTCACCAT 1466 |||||||||||||| ||||||||||| ||||||||||| ||||| || |||||||||||| Sbjct 1240 ATCTCTCTTTCACTGGGAGATGGTCCAAAGCAAAAAGAAAGGGCTCTTCGGCTTCACCAT 1299 Query 1467 GTCCCTAACAATTCC-GTATGTGGAAGGAACACCATG 1502 |||||||| | || | |||||||||||||||| |||| Sbjct 1300 GTCCCTAATA-TTACTGTATGTGGAAGGAACATCATG 1335 Score = 719 bits (389), Expect = 0.0 Identities = 430/450 (96%), Gaps = 2/450 (0%) Strand=Plus/Plus Query 1569 ATGGAGAACCACATGGCTGCAGCGGCATGTGATACGCCTTTCAATTTCTTGAAGAGGGGT 1628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1336 ATGGAGAACCACATGGCTGCAGCGGCATGTGATACGCCTTTCAATTTCTTGAAGAGGGGT 1395 Query 1629 TCAGACCATCTTAATAACCGGCATGCCCTTCCTTCTGCGTTCTTTTCACCCATGGAAAGA 1688 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1396 TCAGACCATCTTAATAACCGGCATTCCCTTCCTTCTGCGTTCTTTTCACCCATGGAAAGA 1455 Query 1689 ACACCAGAGAAAGGGCTTATGTTACGTTCTCATCAAAGCTTCCCAGCCAGGACATGGCAA 1748 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1456 ACACCAGAGAAAGGTCATATGTTACGTTCTCATCAAAGCTTCCCAGCCAGGACATGGCAA 1515 Query 1749 GGGCATGATCAGTCCAGTGGTGGGACCGCCGTAGCAGCTACAGCACCGCCACTGTTTTCA 1808 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1516 GGGCATGATCAGTCCAGTGGTGGGACCGCCGTAGCAGCTACAGCACCGCCTCTGTTCTCA 1575 Query 1809 AATGCAGCATCATCAGGATTCTCACTCTCAGCTACACGCCCTCCTTCATCCACAGCTATT 1868 ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | Sbjct 1576 AATGCAGCATCATCAGGATTCTCACTCTCAGCTACACGCCCACCTTCATCCATAGCTACT 1635 Query 1869 CATCATCCTTCTCAGCCCTTCGTCAATCTGAATCAGCCCGGTCTCTATGTTATCCACCCA 1928 | |||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct 1636 CCTCATCCCTCTCAGCCCTTCTTAAATATGAATCAGCCCGGTCTCTATGTTATCCACCCA 1695 Query 1929 TCTGATTACATATCTCAGCACCAACACAATCTCATGAACCGCCCACAACCACCACCATAG 1988 |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1696 TCTGATTACACATCTCAGCACCACCACAATCTCATGAATCGCCCACAACCACCACCATAG 1755 Query 1989 CTTCCTCCTTCCTCC-GCATAACTCAAGGT 2017 ||||||||||| ||| || || |||||||| Sbjct 1756 CTTCCTCCTTC-TCCCGCCTAGCTCAAGGT 1784 > Ahg496151 jgi|Araly1|496151|fgenesh2_kg.8__1967__AT5G60120.1 Length=1873 Score = 1762 bits (954), Expect = 0.0 Identities = 1234/1357 (91%), Gaps = 68/1357 (5%) Strand=Plus/Plus Query 154 TCCATGTCTCCTCAATCTCATTTCTCTCCTTAGTGATTGAGCTTTTTCCTTCTTTCTCTT 213 ||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||| Sbjct 39 TCCATGTCTCCTCAATCTCGTTTCTCTCCTTAGTGATCGAGC-TTTTCCTTCTTTCTC-- 95 Query 214 TGGTTATTATTCCTTCTCCTCCTCCGTCGTGTTTTTGATTGATTTCAGAATCTAAATCTC 273 | || |||||| | |||| | | || ||||||||||||||||||| Sbjct 96 T-GTAATTATT--AT-TCCT--T-C-TC------------CATTTCAGAATCTAAATCTC 135 Query 274 -C-G-TTTGATTTCTCCATACTCGTGCTGATTTTCACCTATGTAATGTGATTTATGAGCT 330 | | ||| |||| ||||||| | | | ||||||| || ||| |||||||||| |||||| Sbjct 136 TCTGATTT-ATTTTTCCATACACTTACAGATTTTCTCCGATGAAATGTGATTTTTGAGCT 194 Query 331 CTGTTTATTTCAAATCGACGGCGATCGTTG-AATTTATTGATCAATGTGTAAGTAAGAGC 389 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 195 CTGTTTATTTCAAATCGACGGCGATCGTTGAAATTTATTGATCAATGTGTAAGTAAGAGC 254 Query 390 TTGAAGAAATAgtttttgttgttgttgtgaaagctcagagttttgtttgcttttttgttg 449 ||||||||||| ||||||||||| | ||||||||| ||||||||||| Sbjct 255 TTGAAGAAATA------GTTGTTGTTGT------T----GTTTTGTTTACTTTTTTGTTG 298 Query 450 acttttttgAGATTGATGCTGGATCTCAATCTCGACGTCGACTCGACCGAGTCTACTCAG 509 || || ||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 299 AC-TTGTTGAGATTGATGCTGGATCTCAATCTCGACGTCGACTCGGCCGAGTCTACTCAG 357 Query 510 AACGAACGAGATTCGATTACTGTTAAAGGGGTTTCTTTGAATCAGATGGATGAATCGGTG 569 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 358 AACGAACGAGATTCGGTTACTGTTGAAGGGGTTTCTTTGAATCAGATGGATGAATCAGTG 417 Query 570 ACGTCGAACTCTTCTGTTGTTAATGCTGAAGCTTCTAGCTGTATAGATGGTGAAGATGAG 629 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 418 ACGTCGAACTCTTCTGTTGTTAATGCTGAAGCTTCTAGCTGCATAGATGGTGAAGATGAG 477 Query 630 TTGTGCTCTACACGAACGGTCAAGTTTCAATTTGAGATACTGAAAGGA-G-GAGG-agaa 686 ||||| ||||||||||| ||||||||||||||||||||||| |||||| | |||| |||| Sbjct 478 TTGTGTTCTACACGAACCGTCAAGTTTCAATTTGAGATACTAAAAGGAGGAGAGGAAGAA 537 Query 687 gaagaagaagaagatgatgatgaaagaagTGCTGTGATGATGACTAAGGAGTTTTTTCCT 746 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 538 GAAGAAGAAGAAGATGATGATGAAAGAAGTGCTGTGATGATGACTAAGGAGTTTTTTCCT 597 Query 747 GTTGCTAAAGGCATGAACTTTATGGATTCGAGCGCTCAAAGTTCAAGGAGCACCGTTGAT 806 ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| Sbjct 598 GTTGCTAAAGGCATGAATTTTATGGATTCGAGCGCACAAAGTTCCAGGAGCACCGTTGAT 657 Query 807 ATTTCCTTCCAGAGGGGGAAACAAGGTGGAGACTTTATAGGTAGCGGGAGCGGTGGTGGC 866 |||||||||||||| ||||||||||| |||||| || | ||| || | Sbjct 658 ATTTCCTTCCAGAGAGGGAAACAAGGCGGAGAC-TT-T-GGT-------GC--------C 699 Query 867 GATGCTTCACGGGTGATGCAGCCACCATCACAGCCGGTGAAGAAAAGCAGGAGAGGTCCT 926 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 700 GATGCTGCACGGGTGATGCAGCCACCATCACAGCCGGTGAAGAAAAGCAGGAGAGGTCCT 759 Query 927 AGGTCTAAGAGTTCTCAGTATAGAGGCGTCACTTTCTATCGGAGGACAGGCAGATGGGAA 986 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 760 AGGTCTAAGAGTTCGCAGTATAGAGGCGTCACTTTCTATCGGAGGACAGGGAGATGGGAA 819 Query 987 TCGCATATCTGGGATTGCGGTAAACAAGTTTATTTAGGTGGATTTGATACTGCCCATGCT 1046 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 820 TCGCATATCTGGGATTGCGGTAAACAAGTTTATTTAGGTGGATTTGATACTGCCCATGCT 879 Query 1047 GCAGCTAGGGCGTATGATCGAGCTGCTGTCAAATTCCGGGGTCTGGAAGCTGACATCAAT 1106 |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 880 GCAGCTAGGGCGTATGATCGAGCTGCTGTCAAGTTCCGGGGTCTGGAGGCTGACATCAAT 939 Query 1107 TTCGTTATTGGCGATTATGAAGAGGATCTCAAGCAGATGGCGAATCTTTCCAAAGAGGAA 1166 ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 940 TTCATTATCAGCGATTATGAAGAGGATCTCAAGCAGATGGCGAATCTTTCCAAAGAGGAA 999 Query 1167 GTTGTGCAAGTACTTCGGCGACAGAGCTCTGGTTTCTCAAGGAATAATTCTAGATATCAA 1226 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 1000 GTTGTGCAAGTACTTCGGCGACAGAGCTCTGGTTTCTCAAGGAATAACTCAAGATATCAA 1059 Query 1227 GGAGTTGCTTTGCAAAAGATTGGCGGGTGGGGAGCTCAAATGGAGCAGCTTCATGGAAAC 1286 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1060 GGAGTTTCTTTGCAAAAGATTGGCGGGTGGGGAGCTCAAATGGAGCAGTTTCATGGAAAC 1119 Query 1287 ATGGGTTGTGACAAGGCAGCCGTACAATGGAAGGGAAGGGAAGCTGCTTCCTTAATTGAG 1346 |||| || ||||||||||||| |||||||||| ||||||||||| ||||||||||||||| Sbjct 1120 ATGGCTTCTGACAAGGCAGCCATACAATGGAATGGAAGGGAAGCGGCTTCCTTAATTGAG 1179 Query 1347 CCTCATGCATCCCGAATGATTCCCGAGGCAGCTAATGTTAAGCTCGACCTCAACTTGGGA 1406 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1180 CCTCATGCATCCCGGATGATTCCCGAGGCAGCTAATGTTAAGCTCGACCTCAACTTGGGA 1239 Query 1407 ATCTCTCTTTCACTAGGAGATGGTCCGAAGCAAAAAGATAGGGCCCTCCGGCTTCACCAT 1466 |||||||||||||| ||||||||||| ||||||||||| ||||| || |||||||||||| Sbjct 1240 ATCTCTCTTTCACTGGGAGATGGTCCAAAGCAAAAAGAAAGGGCTCTTCGGCTTCACCAT 1299 Query 1467 GTCCCTAACAATTCC-GTATGTGGAAGGAACACCATG 1502 |||||||| | || | |||||||||||||||| |||| Sbjct 1300 GTCCCTAATA-TTACTGTATGTGGAAGGAACATCATG 1335 Score = 835 bits (452), Expect = 0.0 Identities = 513/542 (95%), Gaps = 5/542 (1%) Strand=Plus/Plus Query 1569 ATGGAGAACCACATGGCTGCAGCGGCATGTGATACGCCTTTCAATTTCTTGAAGAGGGGT 1628 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1336 ATGGAGAACCACATGGCTGCAGCGGCATGTGATACGCCTTTCAATTTCTTGAAGAGGGGT 1395 Query 1629 TCAGACCATCTTAATAACCGGCATGCCCTTCCTTCTGCGTTCTTTTCACCCATGGAAAGA 1688 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1396 TCAGACCATCTTAATAACCGGCATTCCCTTCCTTCTGCGTTCTTTTCACCCATGGAAAGA 1455 Query 1689 ACACCAGAGAAAGGGCTTATGTTACGTTCTCATCAAAGCTTCCCAGCCAGGACATGGCAA 1748 |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1456 ACACCAGAGAAAGGTCATATGTTACGTTCTCATCAAAGCTTCCCAGCCAGGACATGGCAA 1515 Query 1749 GGGCATGATCAGTCCAGTGGTGGGACCGCCGTAGCAGCTACAGCACCGCCACTGTTTTCA 1808 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 1516 GGGCATGATCAGTCCAGTGGTGGGACCGCCGTAGCAGCTACAGCACCGCCTCTGTTCTCA 1575 Query 1809 AATGCAGCATCATCAGGATTCTCACTCTCAGCTACACGCCCTCCTTCATCCACAGCTATT 1868 ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| | Sbjct 1576 AATGCAGCATCATCAGGATTCTCACTCTCAGCTACACGCCCACCTTCATCCATAGCTACT 1635 Query 1869 CATCATCCTTCTCAGCCCTTCGTCAATCTGAATCAGCCCGGTCTCTATGTTATCCACCCA 1928 | |||||| |||||||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct 1636 CCTCATCCCTCTCAGCCCTTCTTAAATATGAATCAGCCCGGTCTCTATGTTATCCACCCA 1695 Query 1929 TCTGATTACATATCTCAGCACCAACACAATCTCATGAACCGCCCACAACCACCACCATAG 1988 |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1696 TCTGATTACACATCTCAGCACCACCACAATCTCATGAATCGCCCACAACCACCACCATAG 1755 Query 1989 CTTCCTCCTTCCTCCGCATAACTCAAGGTTCTACACAGCCCTGAGGTTGGAATAAGTTGG 2048 ||||||||||| ||||| || |||||||||||||||| ||||||||||||||||| |||| Sbjct 1756 CTTCCTCCTTCTTCCGCCTAGCTCAAGGTTCTACACAACCCTGAGGTTGGAATAACTTGG 1815 Query 2049 AAGGCCAGCCAAAACGACGCTGAATTCTCCC-AAGATCTGTTGTACTTATTGTCATTGTG 2107 |||||||||||| |||||| | ||||||| || |||| |||||||||||||||||||| Sbjct 1816 AAGGCCAGCCAATACGACGAT---TTCTCCCCAA-ATCTATTGTACTTATTGTCATTGTG 1871 Query 2108 TG 2109 || Sbjct 1872 TG 1873 > Ahg905670 jgi|Araly1|905670|Al_scaffold_0003_2798 Length=1083 Score = 654 bits (354), Expect = 0.0 Identities = 505/572 (88%), Gaps = 34/572 (6%) Strand=Plus/Plus Query 935 GAGTTCTCAGTATAGAGGCGTCACTTTCTATCGGAGGACAGGCAGATGGGAATCGCATAT 994 |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 420 GAGTTCGCAGTATAGAGGCGTCACTTTCTATCGGAGGACAGGGAGATGGGAATCGCATAT 479 Query 995 CTGGGA--TTGCGGTAAACAAGTTTATTTAGGTGGATTTGATACTGCCCATGCTGCAGCT 1052 || | ||| | || | | | ||||||| |||||||||||||||||||||||| Sbjct 480 CTTTAACTTTG-TG-AATCCA----A--TAGGTGGGTTTGATACTGCCCATGCTGCAGCT 531 Query 1053 AGGGCGTATGATCGAGCTGCTGTCAAATTCCGGGGTCTGGAAGCTGACATCAATTTCGTT 1112 ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||| | Sbjct 532 ---GCGTACGATCGAGCTGCTGTCAAGTTCCGGGGTCTGGAGGCTGACATCAATTTCATC 588 Query 1113 ATTGGCGATTATGAAGAGGATCTCAAGCAGATGGCGAATCTTTCCAAAGAGGAAGTTGTG 1172 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 589 ATCAGCGATTATGAAGAAGATCTCAAGCAGATGGCGAATCTTTCCAAAGAGGAAGTTGTG 648 Query 1173 CAAGTACTTCGGCGACAGAGCTCTGGTTTCTCAAGGAATAATTCTAGATATCAAGGAGTT 1232 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 649 CAAGTACTTCGGCGACAGAGCTCTGGTTTCTCAAGGAATAATTCAAGATATCAAGGAGTT 708 Query 1233 GCTTTGCAAAAGATTGGCGGGTGGGGAGCTCAAATGGAGCAGCTTCATGGAAACATGGGT 1292 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | Sbjct 709 GCTTTGCAAAAGATTGGCGGGTGGGGAGCTCAAATGGAGCAGTTTCATGGAAAC--GC-T 765 Query 1293 TGTGACAAGGCAGCCGTACAATGGAAGGGAAGGGAAGCTGCTTCCTT-AATTGAGCCTCA 1351 ||||||||||||||| |||||||||| ||||||||||||||||| || |||||||||||| Sbjct 766 TGTGACAAGGCAGCCATACAATGGAATGGAAGGGAAGCTGCTTC-TTCAATTGAGCCTCA 824 Query 1352 TGCATCCCGAATGATTCCCGAGGCAGCTAAT-----GTTAAGCTCGACCTCAACTTGGGA 1406 ||||||| | |||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 825 TGCATCCTGGATGATTCCCGAGGCAGGTAATCTATTGTTAAGCTCGACCTCAACTTGGGA 884 Query 1407 ATCTCTCTTTCACTAGGAGATGGTCCGAAGCAAAAAGATAGGGCCCTCCGGCTTCACCAT 1466 | | | | ||||||||| ||||||||||||||||| ||||||||||||||| Sbjct 885 AG-TG------A--A--AGATGGTCCAAAGCAAAAAGATAGGGCTCTCCGGCTTCACCAT 933 Query 1467 GTCCCTAACAATTCCGTATGTGGAAGGAACAC 1498 ||| |||||| | |||| |||||||||||||| Sbjct 934 GTCTCTAACAGTACCGTTTGTGGAAGGAACAC 965 Score = 588 bits (318), Expect = 7e-167 Identities = 401/438 (92%), Gaps = 18/438 (4%) Strand=Plus/Plus Query 465 ATGCTGGATCTCAATCTCGACGTCGACTCGACCGAGTCTACTCAGAACGAACGAGATTCG 524 ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1 ATGCTAGATCTCAATCTCGACGTCGACTCGGCCGAGTCTACTCAGAACGAACGAGATTCG 60 Query 525 ATTACTGTTAAAGGGGTTTCTTTGAATCAGATGGATGAATCGGTGACGTCGAACTCTTCT 584 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 61 ATTACTGTTAAAGGGGTTTCTTTGAATCAGATGGATGAATCAGTGACGTCGAACTCTTCT 120 Query 585 GTTGTTAATGCTGAAGCTTCTAGCTGTATAGATGGTGAAGATGAGTTGTGCTCTACACGA 644 | |||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| Sbjct 121 GCTGTTAATGCTGAGGCTTCTAGCTGCATAGATGGTGAAGATGAGTTGTGCTCTATACGA 180 Query 645 ACGGTCAAGTTTCAATTTGAGATACTGAAAGGAGGAGGagaagaagaagaagaagatgat 704 || |||||||||||||||||||||||||||||||||| || ||||| |||| Sbjct 181 ACCGTCAAGTTTCAATTTGAGATACTGAAAGGAGGAG-AG--GAAGA---------TGAT 228 Query 705 gatgaaagaagTGCTGTGATGATGACTAAGGAGTTTTTTCCTGTTGCTAAAGGCATGAAC 764 |||||||||||||||||||||| |||||||||||||||||||||| ||||||||| | Sbjct 229 GATGAAAGAAGTGCTGTGATGA---CTAAGGAGTTTTTTCCTGTTGCCAAAGGCATGGAT 285 Query 765 TTTATGGATTCGAGCGCTCAAAGTTCAAGGAGCACCGTTGATATTTCCTTCCAGAGGGGG 824 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| Sbjct 286 TTTATGGATTCGAGCGCACAAAGTTCCAGGAGCACCGTTGATATTTCCTTCCAGAGAGGG 345 Query 825 AAACAAGGTGGAGACTTTATAGGTAGCGGGAGCGGTGGTGGCGATGCTTCACGGGTGATG 884 |||||||| ||||||||||| || || || |||||||| ||||||||||||||||||| Sbjct 346 AAACAAGGCGGAGACTTTATCGGCAGTGGAAGCGGTGG---CGATGCTTCACGGGTGATG 402 Query 885 CAGCCACCATCACAGCCG 902 |||||||||||||||||| Sbjct 403 CAGCCACCATCACAGCCG 420 Score = 195 bits (105), Expect = 2e-48 Identities = 111/114 (97%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 1569 ATGGAGAACCACATGGCTGCAGCGGCATGTGATACGCCTTTCAATTTCTTGAAGAGGGGT 1628 ||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 970 ATGGAGACCCACATGGCTGCGGCGGCATGTGATACGCCTTTCAATTTCTTGAAGAGGGGT 1029 Query 1629 TCAGACCATCTTAATAACCGGCATGCCCTTCCTTCTGCGTTCTTTTCACCCATG 1682 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1030 TCAGACCATCTTACTAACCGGCATGCCCTTCCTTCTGCGTTCTTTTCACCCATG 1083 > Ahg950765 jgi|Araly1|950765|scaffold_802652.1 Length=398 Score = 189 bits (102), Expect = 8e-47 Identities = 111/115 (97%), Gaps = 1/115 (1%) Strand=Plus/Plus Query 1569 ATGGAGAACCACATGGCTGCAGCGGCATGTGATACGCCTTTCAATTTCTTGAAGAGGGGT 1628 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25 ATGGAGACCCATATGGCTGCAGCGGCATGTGATACGCCTTTCAATTTCTTGAAGAGGGGT 84 Query 1629 TCAGACCATCTTAATAACCGGCATGCCCTTCCTTCTGCGTTCTTTTCACCC-ATG 1682 ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 85 TCAGACCATCTTACTAACCGGCATGCCCTTCCTTCTGCGTTCTTTTCACCCCATG 139 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 86502946395 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5