BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G60170.2 Length=3509 Score E Sequences producing significant alignments: (Bits) Value Ahg358235 jgi|Araly1|358235|fgenesh1_pg.C_scaffold_8002022 2837 0.0 Ahg484947 jgi|Araly1|484947|fgenesh2_kg.5__939__AT3G45630.1 1129 0.0 > Ahg358235 jgi|Araly1|358235|fgenesh1_pg.C_scaffold_8002022 Length=3006 Score = 2837 bits (1536), Expect = 0.0 Identities = 1702/1784 (95%), Gaps = 4/1784 (0%) Strand=Plus/Plus Query 145 ATGAGTGACCATGGTGAGAAGACTTGTCCACTTTGTGCTGAAGAGATGGATCTGACTGAT 204 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 1 ATGAGTGACCATGGAGAGAAGACTTGTCCACTGTGTGCTGAAGAGATGGATCTGACCGAT 60 Query 205 CAACAATTGAAGCCTTGCAAATGTGGTTATCAGATTTGTGTTTGGTGCTGGCATCACATA 264 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 61 CAACAATTGAAGCCTTGCAAATGTGGCTATCAGATTTGTGTTTGGTGCTGGCATCACATA 120 Query 265 GTGGACATGGCAGAGAAAGATCAAATAGAAGGGCGTTGTCCAGCTTGTCGCACTCCATAT 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 121 GTGGACATGGCAGAGAAAGATCAAATAGAAGGGCGTTGTCCAGCTTGTCGCACTCCCTAT 180 Query 325 GACAAAGAAAAGATTGTAGGGATGACTGTTAATTGTGACAGTCTGGCTTCTGAAGGCAAT 384 ||||||||||| |||||||||||||||||| |||| ||||||||||| |||||||||||| Sbjct 181 GACAAAGAAAAAATTGTAGGGATGACTGTTGATTGCGACAGTCTGGCCTCTGAAGGCAAT 240 Query 385 ATGGAGCGCAAGAAGATCCAGAAGTCAAAATCAAAATCTTCTGAAGGGAGAAAGCAACAA 444 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 241 ATGGAGCGCAAGAAGATCCAGAAGTCAAAATCAAAACCTTCTGAAGGGAGAAAGCAACAA 300 Query 445 CTCACCAGTGTGCGAGTGATCCAGAGGAATCTTGTTTACATTGTTGGGTTGCCTCTTAAT 504 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 301 CTCACCAGTGTGCGAGTGATCCAGAGGAATCTTGTCTACATTGTTGGGTTGCCTCTTAAT 360 Query 505 CTAGCCGATGAAGATCTACTCCAACATAAAGAATATTTTGGTCAGTATGGAAAAGTTCTA 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 CTAGCCGATGAAGATCTACTCCAACATAAAGAATATTTTGGTCAGTATGGAAAAGTTCTA 420 Query 565 AAGGTTTCCATGTCCCGAACAGCATCTGGTGTCATCCAACAATTCCCAAACAATACATGC 624 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 421 AAGGTTTCGATGTCCCGAACAGCATCTGGTGTCATCCAACAATTCCCAAATAATACATGC 480 Query 625 AGTGTATATATTACTTATGGAAAAGAGGAAGAGGCTGTTCGCTGCATTCAAGCTGTTCAT 684 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 481 AGTGTATATATTACTTATGGAAAAGAGGAAGAGGCTGTTCGCTGCATTCAGGCTGTTCAT 540 Query 685 GGGTTTATCTTGGATGGTAAACCATTGAAGGCATGTTTTGGGACAACCAAGTATTGTCAT 744 |||||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||| Sbjct 541 GGGTTTATCTTGGATGGTAAACCACTGAAGGCGTGTTTTGGGACAACCAAATATTGTCAT 600 Query 745 GCATGGCTGAGAAATGTGGCATGCGTCAATCCTGATTGTCTCTATTTGCACGAGGTTGGT 804 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 601 GCATGGCTGAGAAATGTGGCATGCGTCAATCCTGATTGTCTGTATTTGCACGAGGTTGGT 660 Query 805 TCTCAAGATGATAGCTTCACAAAAGATGAGATCATATCAGCCTATACAAGGAGTAGAGTT 864 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TCTCAAGATGATAGCTTCACAAAAGATGAGATCATATCAGCCTATACAAGGAGTAGAGTT 720 Query 865 CAACAAATCACTGGAGCAACAAATATTCTGCAGCACCATTCAGGGAACATGCTACCTCCA 924 ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct 721 CAACAAATCACTGGAGCAACAAATATTCTGCAGCACCGTTCAGGGAGCATGCTACCTCCA 780 Query 925 CCACTGGATGCTTATTGCAGTGACAGTTCTTCTGCAAAACCAATTATAAAGGTTCCTTCA 984 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 781 CCACTGGATGCTTATTGCAGTGACAGTTCCTCTGCAAAACCAATTATAAAGGTTCCTTCA 840 Query 985 ACTAATGCAACTAGTGTTCCCAGGTATTCTCCGCCAAGTGGGAGTGGGAGCTCCAGCAGA 1044 |||| |||||| ||||||||||||||||||||||| |||| |||||||||||| |||||| Sbjct 841 ACTAGTGCAACAAGTGTTCCCAGGTATTCTCCGCCTAGTGAGAGTGGGAGCTCTAGCAGA 900 Query 1045 TCCACTGCCCTTCCTGCTGCAGCGTCATGGGGGACACATCAGTCTTTAGCAACTTCGGTC 1104 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 901 TCCACTGCTCTTCCTGCTGCAGCGTCATGGGGGACACATCAGTCTTTAGCAACTTCAGTT 960 Query 1105 ACCTCAAATGGATCTTCTGATATACAAAGATCAACATCAGTGAATGGAACCTTACCCTTT 1164 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct 961 ACCTCAAATGGATCTTCTCATATACAAAGATCAACATCAGTAAATGGAACCTTACCCTTT 1020 Query 1165 TCTGCTGTTGTTGCAAACGCAGCTCATGGGCCTGTATCCTCTAATGACATTCTTAAAAGA 1224 ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct 1021 TCTGCTGTTGTTGCAAACGCAGCTCATGGGCCTGTATCCTCCAGTGACATTCTTAAAAGA 1080 Query 1225 CCATCTCGCAAAGAAGAAAGCCAAATAGTTATGGACAAAGTCAAACCTAGTGTGTTGAAG 1284 |||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||| Sbjct 1081 CCATCTCGCAAAGAAGAAAGCCAAATGGTTATGGACAAAGTCAAAACTAGCGTGTTGAAG 1140 Query 1285 CCCTTGCAGCATAATGTTGTGGTTTCTGGGTCCGAGAGAATTACCGCACCCGATAGAGAT 1344 |||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||| Sbjct 1141 CCCTTGCAGCATAATGTTGTGGTTTCTGGGTCCGAGAGAACTACCTCACCTGATAGAGAT 1200 Query 1345 CCTACTAGCAATCGTTTATCCAGTTCAGTAGACTCTGCCTACGGAGGCAGAGACATTGAC 1404 |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct 1201 CCTACTAGCAATCGTTTATCCAGTTCAGTAGACTCTTCCTACGGTGGCAGAGACATTGAC 1260 Query 1405 CAGCCTTCAGCCTACAGTGGCAGAGACATTGACAAGCCTTCATCTACTGTTAGCTCGTTT 1464 |||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||| | Sbjct 1261 CAGCCTTCAGCCTACAGTGGCAGAGACATTGACAAGCCTTCAGCTACTGTGAACTCGTCT 1320 Query 1465 GATGCTGCAAATGAAGCTGTAGAAGATGTCCCTACTGTA-AGCAACTTGTTGGATGGTGT 1523 |||| || |||||||||||||||||||| |||||||||| | |||||||| ||| ||||| Sbjct 1321 GATGATGTAAATGAAGCTGTAGAAGATGGCCCTACTGTACA-CAACTTGTCGGACGGTGT 1379 Query 1524 TGCATGCATGCGGATAACTATGAATTGTAGGGATGAACGTCCTGATATTACAATGGCGAT 1583 |||| ||||| |||||||| |||| ||||||||||||||||||||||||||||||||||| Sbjct 1380 TGCACGCATGGGGATAACTGTGAAATGTAGGGATGAACGTCCTGATATTACAATGGCGAT 1439 Query 1584 TGGTAGTCAAAGTGATCAAGGTTCTATTAGACAACCTGGTTC-TGAAGTATCAAAGTTGC 1642 ||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||| Sbjct 1440 TGGTAGTCAGTGTGATCAAGGTTCTATTAGACAACCTGGT-CATGAAGTATCAAAGTTGC 1498 Query 1643 CAGATTTAGAGCAATGTAGGATAGATAGTTCTATAAACACTGATAAGAAAGCTATCTCGT 1702 || |||||||| |||||||||| |||||||||||| |||||||||||||||||||| ||| Sbjct 1499 CACATTTAGAGAAATGTAGGATGGATAGTTCTATAGACACTGATAAGAAAGCTATCCCGT 1558 Query 1703 TAGAGGATAGGATCCCCCGCACTAGGCCAGGGTGGGATTGGATATCAGATTTGCAATCGC 1762 ||||||||||| |||||||||| ||||||| ||||||||||| ||||||||||||||||| Sbjct 1559 TAGAGGATAGGGTCCCCCGCACAAGGCCAGAGTGGGATTGGAGATCAGATTTGCAATCGC 1618 Query 1763 AAATGCAAGGAAGCTCTAAATTGCAAGTGGAGGATATATCAACATTGGATAGCCAACGGC 1822 | |||||||||||||| |||||||||| |||||| |||| | |||| || ||||||| || Sbjct 1619 ATATGCAAGGAAGCTCAAAATTGCAAGAGGAGGAAATATTATCATTTGACAGCCAACAGC 1678 Query 1823 CTCACCCTGAAGAGGATATTATCCACTCGCGGTTGCTGTCTAATTTGTCAAGTTCCAGTT 1882 ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct 1679 ATCACCCTGAAGAGGATATTATCCACTCGCGGTTTCTGTCTAATTTGCCAAGTTCCAGTT 1738 Query 1883 TGGATACAAATCATATGGCTTCTCGTTCTTCCCTACCTTGTGAA 1926 |||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1739 TGGATACAAATCATATGGCTTCTCGTTCTTCCCTGCCTTGTGAA 1782 Score = 1783 bits (965), Expect = 0.0 Identities = 1118/1190 (94%), Gaps = 17/1190 (1%) Strand=Plus/Plus Query 1929 TAGGGGCAGTGATAGATTGCATCTTCCAAATGGATTTGGTGAGAAATCCATGTCCAGTGT 1988 ||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct 1824 TAGAGGCAGTGATAGATTGCATCTTCCAAATGGATTTGGTGAGAGATCCATATCCAGTGT 1883 Query 1989 GGAGCACTCTCTGTTCGCAAATGAAGGCAGGAACAAAGTCAACAATGCAGAGGATGCTAT 2048 |||||| |||||||| || ||||||| |||||||||||||||||||| ||||||| |||| Sbjct 1884 GGAGCATTCTCTGTTTGCTAATGAAGACAGGAACAAAGTCAACAATGTAGAGGATCCTAT 1943 Query 2049 ACTTTCAAACATTTTGTCACTCGATTTTGATCCATGGGATGAATCCTTGACTTCTCCCCA 2108 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1944 ACTTTCGAACATTTTGTCACTCGATTTTGATCCATGGGATGAATCCTTGACTTCTCCCCA 2003 Query 2109 CAATTTGGCAGAGTTACTAGGTGAAGTTGATCAGCGATCTAGTACTCTTAAACCTTCAAA 2168 |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 2004 CAATTTGGCAGAGTTACTCGGTGAAGTTGATCAGCAATCTAGTACTCTTAAACCTTCAAA 2063 Query 2169 CTTCCTAAAGCAACATAACAACCAGTCTAGATTTTCTTTTGCACGGTATGAAGAATCTAG 2228 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2064 CCTCCTAAAGCAACATAACAACCAGTCTAGATTTTCTTTTGCACGGTATGAAGAATCTAG 2123 Query 2229 TAATCAAGCATATGACAGTGAGAAC-TATAGCATTTATGGGCAGTTGTCAAGAGATAAAC 2287 ||||||||||||||||||||||||| | ||||| |||||||||||| ||||||||| ||| Sbjct 2124 TAATCAAGCATATGACAGTGAGAACCT-TAGCACTTATGGGCAGTTTTCAAGAGATCAAC 2182 Query 2288 CTATTCAGGAGTCTGCCA-TGAGCCGAGATATCTATCGAAATAACCTTGGGAGTGTAAAT 2346 ||||||||||||| | | ||||||||||||||||||||||||| || ||||| ||||| Sbjct 2183 CTATTCAGGAGTCAGT-AGTGAGCCGAGATATCTATCGAAATAATCTCGGGAGCCTAAAT 2241 Query 2347 GGATTTGCTTCAAACTTCGCTGGTGGATTGGATAACTTTGCCGCTAGTCCTTTATTTTCT 2406 |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||| Sbjct 2242 GGATTTGCTTCAAACTACGCTGGTGGATTGGATAACTTTGCTGCTAGTCCTTTATTCTCT 2301 Query 2407 TCGCACAAGAATCCTGTTTCACGACCTCAAGTTTCTGCGCCTCCAGGATTTTCTGCTCCC 2466 |||||||| ||||||||||||||||| ||||||||||| || |||||||||||||||||| Sbjct 2302 TCGCACAAAAATCCTGTTTCACGACCCCAAGTTTCTGCACCGCCAGGATTTTCTGCTCCC 2361 Query 2467 AACAGGCTACCTCCTCCTGGCTTCTCGTCACATGAAAGAGTGGGCCTATCATCAGATACT 2526 |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 2362 AACAGGCTACCTCCTCCTGGCTTCTCTTCACATGAAAGAGTGGGCCTATCTTCAGATACC 2421 Query 2527 ACACTAGGAAATCGATTTCTTGACTCTACTTC-AT-T-GAGGAATGCATATCAAGTACCA 2583 ||||||||| |||||||||||||||||| || || | |||||||||||||||||||||| Sbjct 2422 GCACTAGGAACTCGATTTCTTGACTCTACCTCCATATTGAGGAATGCATATCAAGTACCA 2481 Query 2584 CCTCCAGTTGGTAATTCAAATGGTGCAAGTGATATCGACTTTGTGGATCCTGCAATTCTA 2643 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 2482 CCTCCAGTTGGTAATTCAAATGGTGCAAGTGATATTGACTTTGTGGATCCTGCAATTCTA 2541 Query 2644 GCTGTTGGAAGAGGGATGGTAAATGCTGACTTGGA-CATGAGATCAGGATTCTCATCACA 2702 ||||||||||||||| |||||||||| |||||||| | |||||||||||||||||||||| Sbjct 2542 GCTGTTGGAAGAGGGCTGGTAAATGCAGACTTGGATC-TGAGATCAGGATTCTCATCACA 2600 Query 2703 ACTGAATTCTTTTGAAAACGAAACAGGACTCCATATGTTGAGACAGCAGTCTCTGTCTTC 2762 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 2601 ACTGAATTCTTTTGAAAACGAAACAGGGCTCCATATGTTGAGACAGCAGTCCCTGTCTTC 2660 Query 2763 TGCACA--A-CAAGTTAATGGGTTTCATCATGATCTCAGAAACTTATCTCCTTCACTTAA 2819 |||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2661 TGCACACCAACAAGTTAATGGGTTTCATCATGATCTCAGAAACGTATCTCCTTCACTTAA 2720 Query 2820 CGACCCTTACGGATTTAGCTCAAGGCTTATGGATCAAACACAGGGAAGTAGCTTGTCTCC 2879 ||| ||||| ||||||||| ||||||| |||||||||||||||||||||||||| ||||| Sbjct 2721 CGATCCTTATGGATTTAGCGCAAGGCTAATGGATCAAACACAGGGAAGTAGCTTATCTCC 2780 Query 2880 TTTCTCACAGCTCCCAAGACAACAACCATCTGCAAATTCAATCTTGTCC-AATGGTCATC 2938 |||||||||||||||||| |||||||||||||| |||||||||||| || |||||||| | Sbjct 2781 TTTCTCACAGCTCCCAAGGCAACAACCATCTGCGAATTCAATCTTG-CCTAATGGTCA-C 2838 Query 2939 ACTGGGATAAGTGGAATGAAGGGCAAAGTGTGAACAATATAGGCATGGCCGAGCTTCTTA 2998 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 2839 --TGGGATAAGTGGAATGAAGGGCAAAGTGTGAACAATATAGGCATGGCCAATCTTCTTA 2896 Query 2999 GGAATGAACGGCTGGGTTTTAATGGGAGCTTATACAACAACGGATATGAAGAACCAAAAT 3058 ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| Sbjct 2897 GGAATGAACGGCTGGGTTTTAATGGGAGCTTGTACAACAACGGATATGAAGAATCGAAAT 2956 Query 3059 TCCGGATTCCAAGTCCCGGTGATGTGTATAACAGGACATATGGGATTTGA 3108 |||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 2957 TCCGGATTCCAAGTCCTGGAGATGTGTATAACAGGACATATGGGATTTGA 3006 > Ahg484947 jgi|Araly1|484947|fgenesh2_kg.5__939__AT3G45630.1 Length=3408 Score = 1129 bits (611), Expect = 0.0 Identities = 1080/1299 (83%), Gaps = 62/1299 (5%) Strand=Plus/Plus Query 145 ATGAGTGACCATGGTGAGAAGACTTGTCCAC-TT-TGTGCTGAAGAGATGGATCTGACTG 202 |||||||| | ||||| |||||||| || | || ||||| || ||||||||| |||||| Sbjct 87 ATGAGTGATTACGGTGAAAAGACTTG-CC-CTTTGTGTGCAGAGGAGATGGATTTGACTG 144 Query 203 ATCAACAATTGAAGCCTTGCAAATGTGGTTATCAGATTTGTGTTTGGTGCTGGCATCACA 262 | || ||||||||||||||||||||||| |||||||||||||||||||||||||| |||| Sbjct 145 ACCAGCAATTGAAGCCTTGCAAATGTGGCTATCAGATTTGTGTTTGGTGCTGGCACCACA 204 Query 263 TAGTGGACATGGCAGAGAAAGATCAAAT-AGAAGGGCGTTGTCCAGCTTGTCGCACTCCA 321 || ||||||||||||||||||||| ||| ||||||||| ||||||||||| || |||||| Sbjct 205 TAATGGACATGGCAGAGAAAGATC-AATCAGAAGGGCGCTGTCCAGCTTGCCGTACTCCA 263 Query 322 TATGACAAAGAAAAGATTGTAGGGATGACTGTTAATTGTGACAGTCTGGCTTCTGAAGGC 381 ||||| |||||||||||||| |||||||| ||| || || || ||| | ||||||||| Sbjct 264 TATGATAAAGAAAAGATTGTTGGGATGACCGTTGATCAAGAGAGACTGACCTCTGAAGGC 323 Query 382 AATATGGAGCGCAAGAAGATC-CAGAAGTCAAAATCAAAATCTTCTGAAGGGAGAAAGCA 440 || ||||| ||||| || | | || |||||||||| |||||||||||||||||||||| Sbjct 324 AACATGGATCGCAA-AAAAACACAAAAGTCAAAATTGAAATCTTCTGAAGGGAGAAAGC- 381 Query 441 ACAACTCACCAGTGTGCGAGT-GATCCAGAGGAATCTTGTTTACATTGTTGGGTTGCCTC 499 | ||| || ||||| ||||| | || | || |||||||||||||||||||||||||| | Sbjct 382 -C-ACTAACAAGTGTCCGAGTGGTTCGA-AGAAATCTTGTTTACATTGTTGGGTTGCCCC 438 Query 500 TTAATCTAGCCGATGAAGATCTACTCCAACATAAAGAATATTTTGGTCAGTATGGAAAAG 559 |||||||||| ||||||||||| | ||| | ||| || |||||||||||||||||||| | Sbjct 439 TTAATCTAGCAGATGAAGATCTTCCCCAGCGTAATGAGTATTTTGGTCAGTATGGAAAGG 498 Query 560 TTCTAAAGGTTTCCATGTCCCGAACAGCATCTGGTGTCATCCAACAATTCCCAAACAATA 619 ||||||||||||||||||||||||||||| | ||| |||||||||| ||||| ||||| | Sbjct 499 TTCTAAAGGTTTCCATGTCCCGAACAGCAACAGGTCTCATCCAACAGTTCCCTAACAACA 558 Query 620 CATGCAGTGTATATATTACTTATGGAAAAGAGGAAGAGGCTGTTCGCTGCATTCAAGCTG 679 |||||||||||||||| |||||||| |||||||||||||||||||| || |||||| ||| Sbjct 559 CATGCAGTGTATATATCACTTATGGCAAAGAGGAAGAGGCTGTTCGATGTATTCAATCTG 618 Query 680 TTCATGGGTTTATCTTGGATGGTAAACCATTGAAGGCATGTTTTGGGACAACCAAGTATT 739 | |||||||||||||||||||||||| || |||||||||||||||||||||| ||||||| Sbjct 619 TCCATGGGTTTATCTTGGATGGTAAAGCACTGAAGGCATGTTTTGGGACAACAAAGTATT 678 Query 740 GTCATGCATGGCTGAGAAATGTGGCATGCGTCAATCCTGATTGTCTCTATTTGCACGAGG 799 ||||||||||| | ||||| | | ||||| |||||||||||| ||||||||||| |||| Sbjct 679 GTCATGCATGGTTAAGAAACGCGACATGCAACAATCCTGATTGCCTCTATTTGCATGAGG 738 Query 800 TTGGTTCTCAAGATGATAGCTTCACAAAAGATGAGATCATATCAGCCTATACAAGGAGTA 859 |||| |||||||| ||||| || ||||||||||||||||||||||||||||||||| || Sbjct 739 TTGGCTCTCAAGAGGATAGTTTTACAAAAGATGAGATCATATCAGCCTATACAAGG-GT- 796 Query 860 GAGTTCAACAAATCACTGGAGCAACAAATATTCTGCAGCACCATTCAGGGAACATGCTAC 919 | || |||||||||||||||||||||| | |||| ||| |||||||| |||||||| Sbjct 797 ---T-CAGCAAATCACTGGAGCAACAAATACTATGCAATACCGTTCAGGGAGCATGCTAC 852 Query 920 CTCCACCACTGGATGCTTATTGCAGTGACAGTTCTTCTGCAAAACCAATTATAAAGGTTC 979 |||||||| ||||||||||| |||||||||||||| |||| || |||||| ||| |||| Sbjct 853 CTCCACCATTGGATGCTTATGGCAGTGACAGTTCTACTGCGAATCCAATTGCAAAAGTTC 912 Query 980 CTTCAACTAATGCAACTAGTGTTCCCAGGTA-TTCTCCGCCAAGTGGGAGTGGGAGCTCC 1038 |||| |||| | || ||||| ||| ||| | |||||| || | ||||||||||| Sbjct 913 CTTCTACTACTTCAGTTAGTGCTCCTAGG-AGTTCTCCACC---T---AGTGGGAGCTCT 965 Query 1039 AGCAGATCCACTGCCCTTCCTGCTGCAGCGTCATGGGGG--AC----A-CA--TCAG--- 1086 | | ||| ||||| |||||||||||||| ||||||||| || | || ||| Sbjct 966 GGTAAATCAACTGCGCTTCCTGCTGCAGCATCATGGGGGGCACGTTTAACAAATCAACAC 1025 Query 1087 TCTTTAGCAACTTCGG-TCACCTCAAATGGATCTTCTG-ATA-TACAAAGATCAACATCA 1143 |||||||||||||| | | ||||||||||||| || ||| | ||||||||||||||| Sbjct 1026 TCTTTAGCAACTTCAGCTTTG-TCAAATGGATCTT-TGGATAAT-CAAAGATCAACATCA 1082 Query 1144 GTGAATGGAACCTTACCCTTT-TCTGCTGTTGTTGCAAACGCAGCTCATGGGCCTGTATC 1202 | ||||||||| || | | | ||| | ||||||||||| |||||||||||||||||| | Sbjct 1083 GAGAATGGAACTTTGGC-TATGTCTACAGTTGTTGCAAATGCAGCTCATGGGCCTGTAAC 1141 Query 1203 CTCTAATGACATTCTTAA-AAGACCATCTCGCAAAGAAGAAAGCCAAATAGTTA--TGGA 1259 ||||| | ||| |||| | || |||| ||| || ||||||| |||| | || || | Sbjct 1142 CTCTAGTAACACTCTTCAGAA-ACCACCTCTTAAGGAAGAAATTCAAACA-TTGGCTGAA 1199 Query 1260 CAAAGTCAAACCTAGTGTGTTGAAGCCCTTGCAGCATAATG-TTGTGGT---TTCTGGGT 1315 |||| ||| ||||| ||||| ||||| |||||||| || | ||||| | |||||||| Sbjct 1200 AAAAG-CAATCCTAGCGTGTTTAAGCCTTTGCAGCAGAA-GATTGTGTTGGATTCTGGGT 1257 Query 1316 CCGAGAGAATTACCGCACCCGATAGAGATCCTACTAGCAATC-GTTTATCCAGTTCAGTA 1374 || |||||| ||| |||| |||||||||||| |||||||| | | |||| ||| || | Sbjct 1258 CCAAGAGAACTACATCACCTAATAGAGATCCTAGTAGCAATCAGAT-ATCCTGTTTAGAA 1316 Query 1375 GACTCTGCCTACGG-AGGCAGAGACATTGACCAGCCTTC 1412 || ||| ||||| || ||||| ||||||| ||||||| Sbjct 1317 GAATCTTCCTACAATAG-CAGAGTCATTGACAAGCCTTC 1354 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 132516469186 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5