BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G60310.1
Length=1851
Score E
Sequences producing significant alignments: (Bits) Value
Ahg950784 jgi|Araly1|950784|scaffold_802671.1 1816 0.0
Ahg496166 jgi|Araly1|496166|fgenesh2_kg.8__1982__AT5G60300.2 1574 0.0
Ahg937207 jgi|Araly1|937207|scaffold_501398.1 719 0.0
Ahg496163 jgi|Araly1|496163|fgenesh2_kg.8__1979__AT5G60270.1 531 9e-150
Ahg937206 jgi|Araly1|937206|scaffold_501397.1 329 4e-89
> Ahg950784 jgi|Araly1|950784|scaffold_802671.1
Length=1781
Score = 1816 bits (983), Expect = 0.0
Identities = 1137/1211 (94%), Gaps = 11/1211 (1%)
Strand=Plus/Plus
Query 225 CTCTAAACCACTCTCCTTCTCAACACACTTCGTTTGCGCTCTAGTGCCTCAGCCTGGAGT 284
||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 171 CTCTAGACCACTCTCCTTCTCAACACATTTTGTTTGCGCTCTAGTGCCTCAGCCTGGAGT 230
Query 285 TGAAGGTGGCCATGGAATGGCCTTTGTAGTATCTCCTTCTATGGATTTCTCACATGCAGA 344
|||||| || ||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 231 TGAAGGCGGTCATGGAATGGCCTTTGTAGTATCTCCTTCAATGGATTTCTCGCATGCAGA 290
Query 345 ATCAACTAGATACTTGGGGATTTTCAACGTATCAAAAAATGGATCTCCCTCTTCTAATGT 404
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 291 ATCAACTAGATACTTGGGGATTTTCAACGTGTCAAAAAATGGATCTCCCTCTTCTCATGT 350
Query 405 GCTTGCTGTTGAGCTTGACACTATTTGGAACCCTGATTTTGAAGATATCGACCACAACCA 464
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 351 GCTTGCTGTTGAGCTTGACACTATTTGGAACCCGGATTTTGAAGATATCGACCACAATCA 410
Query 465 TGTGGGGATTGATGTGAACAGTCCTTTGTCAGTTGGGACAGCTTCTGCATCTTACTATTC 524
||||||||||||||||||||||||| |||| | ||| | |||||| |||||||||| |||
Sbjct 411 TGTGGGGATTGATGTGAACAGTCCTCTGTCGGATGGAATAGCTTCGGCATCTTACTTTTC 470
Query 525 CGACATAAAGGGGAAGAACGAAAGCATAAACCTCTTGAGCGGACATCCAATACAGGTTTG 584
|||||||||| |||||||||||||||||||||||||||| ||| | ||| ||||||||||
Sbjct 471 CGACATAAAGCGGAAGAACGAAAGCATAAACCTCTTGAGTGGAAACCCATTACAGGTTTG 530
Query 585 GGTTGATTATGAAGACAATATGCTTAATGTTTCGATGGCTCCTCGTGAAGTCCAGAAGCC 644
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 531 GGTTGATTATGAAGACAATATGCTCAATGTTTCGATGGCTCCTTGTGAAGTCCAGAAGCC 590
Query 645 AAGTCG---GCCTCTTTTGTCACAACACATCAATCTTTCAGATATTTACCCGAACAGAAG 701
|||||| ||||||||||||||||| |||||||||||||||||||| ||| ||||||||
Sbjct 591 AAGTCGCTCGCCTCTTTTGTCACAACCCATCAATCTTTCAGATATTTTCCCAAACAGAAG 650
Query 702 ACTTTTCGTTGGATTCTCTGCAGCAACAGGGACAGCTATCAGTTATCAGTATGTTCTTTC 761
|||||| ||||| ||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 651 ACTTTTTGTTGGGTTCTCTGCAGCAACAGGGACAGCTATCAGTTATCAATATATTCTTTC 710
Query 762 ATGGAGTTTTAGCACAAGCAGAGGATCACTGCAGCGATTTGACATCTCAAGACTCCCTGA 821
|||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct 711 GTGGAGTTTTAGCACAAGCAGAGGATCACTGCAGCGACTTGACATCTCAAGACTACCTGA 770
Query 822 AGTTCCTCATCCTAGAGCTGAACATAAGAACCTATCTCCATTGTTTATTGACCTGCTTGG 881
|||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||
Sbjct 771 AGTTCCACATCCTAGAGCTGAACATAAGAACCTATCTCCGCTGTTTATTGTCCTGCTTGG 830
Query 882 TTTTCTGGCTATCATGGGCTTGTGTACTCTTACTGGAATGTA-TTTTTTCAAGAGGGGCA 940
|||||||||||||||||||||||||||||||||||||||||| |||||| | |||| |||
Sbjct 831 TTTTCTGGCTATCATGGGCTTGTGTACTCTTACTGGAATGTACTTTTTT-AGGAGGAGCA 889
Query 941 AGTATGCAGAAATAACCGAAGAATGGGAAAATGAATTTGGTGCACATCGGTTCTCTTACA 1000
||||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||||||
Sbjct 890 AGTATGCAGAAGTAACCGAAGCATGGGAAAAGGAATTTGGTGCACATCGATTCTCTTACA 949
Query 1001 AATCCTTGTACAAAGCAACAAAAGGGTTTCACAAGGATGGATTTCTTGGAAAAGGAGGTT 1060
||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 950 AATCCTTGTACAAAGCAACAAAAGGGTTTAACAAGGATGGATTTCTTGGAAGAGGAGGTT 1009
Query 1061 TTGGAGAAGTCTACAGAGGAAAACTCCTTTT-AAGCAGAGAAAAAGCTGTGAAGAGAATG 1119
|||||||||||||||||||||| ||| |||| || |||||||| ||||||||||||||||
Sbjct 1010 TTGGAGAAGTCTACAGAGGAAATCTC-TTTTCAAACAGAGAAATAGCTGTGAAGAGAATG 1068
Query 1120 TCACATGATGGTGATCAAGG-GTTGAAGCAATTTGTGGCAGAAGTGGTGAGCATGAGATG 1178
|||||||| ||||||||||| || ||||||||||||||| ||||| ||||||||||||||
Sbjct 1069 TCACATGACGGTGATCAAGGTGT-GAAGCAATTTGTGGCTGAAGTCGTGAGCATGAGATG 1127
Query 1179 TCTGAAACATAGGAATCTTGTTCCACTTCTTGGGTATTGCAGGAGAAAGCATGAGTTTCT 1238
||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1128 TCTGAAACACAGGAATCTTGTTCCGCTTCTTGGGTATTGCAGGAGAAAACATGAGTTTCT 1187
Query 1239 CCTTGTCTCTGATTACATGACCAATGGTAGTCTCGACGAGCATTTGTTTGATGACCAGAA 1298
||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 1188 TCTTGTCTCTGAGTACATGCCCAATGGTAGTCTTGACGAGCATTTGTTTGATGACCAGAA 1247
Query 1299 ACCGGTACTTTCTTGGCCACAAAGACTTGTGATTATTAAGGGTATTGCAT--CTGCTCTC 1356
||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||
Sbjct 1248 ACCGGTACTTTCTTGGCGACAAAGACTTGTGATTATTAAGGGTATTGCATATCTGCACTC 1307
Query 1357 TGTTACCTTCATACAGGTGCTGACCAAGTTGTTCTGCACCGAGATATCAAAGCTTCAAAC 1416
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1308 TGTTACCTTCATACAGGTGCGGACCAAGTTGTTCTGCACCGAGATATCAAAGCTTCAAAC 1367
Query 1417 ATTATGTTGGA 1427
|||||||||||
Sbjct 1368 ATTATGTTGGA 1378
Score = 566 bits (306), Expect = 3e-160
Identities = 357/382 (93%), Gaps = 2/382 (1%)
Strand=Plus/Plus
Query 1471 TTTCATGACCATGGAGGCATCTCAGACTCAACATGCGCCGTTGGGACTATTGGGTACATG 1530
||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1381 TTTCACGACCATGGAGGCATCTCAGACTCAACATGCGCCGTGGGGACTATCGGGTACATG 1440
Query 1531 GCGCCAGAGATACTTTATATGGGAGCTTCCACTAGAACTGATGTGTATGCCTTTGGTGTT 1590
|||||||| |||||| |||||||||| |||||||||||||||| ||||||||||||||||
Sbjct 1441 GCGCCAGATATACTTCATATGGGAGCATCCACTAGAACTGATGAGTATGCCTTTGGTGTT 1500
Query 1591 TTCATGGTTGAAGTAACATGTGGGAGGAGACCTGTGGAACCACAGTTGCAACTTGAGAAA 1650
||||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 1501 TTCATGGTTGAAGTAACCTGTGGGAGGAGACCTGTGGAACCGCAGTTGCAAGTTGAGAAA 1560
Query 1651 CAAATTCTGATCGAATGGGTGCCA-GAATCCAGACCCACAATGGAGCAAGTTATCCTATA 1709
| | ||||||| |||||||| | ||||||||||| ||||||||||||||| |||||||
Sbjct 1561 CGAGTTCTGATTGAATGGGT-TTATGAATCCAGACCTACAATGGAGCAAGTTGTCCTATA 1619
Query 1710 CTTAAACCAGAACCTACCATTGCCAGATTTCTCACCATACACTGTGGGGATTAGCAATCA 1769
||||||| |||||||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct 1620 CTTAAACAAGAACCTACCTTTGCCAGATTTCTCACCATATACAGTGGGGATTAGCAATCA 1679
Query 1770 TTCTTCGGTTCTGATTGATGCAGCCTCCCTTGTAGCTTCAAGGAGCTGGTCAGCTGCTTC 1829
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 TTCTTCGGTTCTGATTGATGCAGCCTCCCTTGTAGCTTCAAGGAGCTGGTCAGCTGCTTC 1739
Query 1830 GTCGGCCACTAACTCACCTTAA 1851
||||||| |||||||||||||
Sbjct 1740 CTCGGCCAATAACTCACCTTAA 1761
Score = 191 bits (103), Expect = 2e-47
Identities = 125/135 (93%), Gaps = 3/135 (2%)
Strand=Plus/Plus
Query 25 CTGATGATATCCTTTTTTCATTTGATTAAACTCTCAAGTCAGCAAGAGACAAGTTTTGTC 84
||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct 35 CTGAT-ATATCCTTTTTTCATTTGATTGAACTCTCAAGTCAGCAAGAGACAAGGTTTGTC 93
Query 85 TATG-AAACTTTTCGCAGCCAAGAAAATCTTTATCTTGATGGATCGGCAACAGTACTTCC 143
|||| |||| || ||| |||||||||||||||||||||||||||| |||| |||||||||
Sbjct 94 TATGAAAAC-TTCCGCGGCCAAGAAAATCTTTATCTTGATGGATCTGCAAGAGTACTTCC 152
Query 144 CAATGGATTATTGCA 158
|| ||||||||||||
Sbjct 153 CAGTGGATTATTGCA 167
> Ahg496166 jgi|Araly1|496166|fgenesh2_kg.8__1982__AT5G60300.2
Length=2407
Score = 1574 bits (852), Expect = 0.0
Identities = 1418/1687 (84%), Gaps = 55/1687 (3%)
Strand=Plus/Plus
Query 13 TTGTTTCAGATCCTGATGATATCCTT-TTTTCATTTGATTAAACTCTCAAGTCAGCAAGA 71
||| ||||||||||||| || | ||| | ||||| ||||| || |||||||| |||||
Sbjct 162 TTGCTTCAGATCCTGATCATCT-CTTCTCTTCATCTGATTTCTCTATCAAGTCAACAAGA 220
Query 72 GACAAGTTTTGTCTATGAAA-CTT-TTCGCAGCCAAGAAAATCTTTATCTTGATGGATCG 129
|||||| ||||||||||||| ||| ||| | || | |||||||||||||||| |||
Sbjct 221 GACAAGCTTTGTCTATGAAAGCTTCCTCG-A-CCGACAAAATCTTTATCTTGACAAATCT 278
Query 130 GCAACAGTACTTCCCAATGGATTATTGCAGCTTACAAATGCTTCCGATCATCAGATGGCT 189
|||| ||||||||||| ||| |||||||||||||| |||||||| || || ||||||| |
Sbjct 279 GCAATAGTACTTCCCAGTGGTTTATTGCAGCTTACGAATGCTTCAGAGCACCAGATGGGT 338
Query 190 CATGTTTTCTACAAG-GACTCAATTGAGCTCAGTTCCTCTAAACCACTCTCCTTCTCAAC 248
|||| |||| ||||| || |||||||| ||||||| ||| ||||||||| ||||||||
Sbjct 339 CATGCTTTCCACAAGAAAC-CAATTGAGTTCAGTTCATCTGGACCACTCTCTTTCTCAAC 397
Query 249 ACACTTCGTTTGCGCTCTAGTGCCTCAGCCTGGAGTTGAAGGTGGCCATGGAATGGCCTT 308
|||||| || || ||||| |||||| |||| | |||||||| |||||||| || | |||
Sbjct 398 ACACTTTGTGTGTGCTCTGGTGCCTAAGCCACGTGTTGAAGGCGGCCATGGTATTGTCTT 457
Query 309 TGTAGTATCTCCTTCTATGGATTTCTCACATGCAGAATCAACTAGATACTTGGGGATTTT 368
|||| |||||||||||||||||||| | || |||||||||||||||||||||||||||||
Sbjct 458 TGTATTATCTCCTTCTATGGATTTCACGCACGCAGAATCAACTAGATACTTGGGGATTTT 517
Query 369 CAACG-TATCAAAAAATGGATCTCCCTCTTCTAATGTGCTTGCTGTTGAGCTTGACACTA 427
||| | | |||| || ||||||| |||||| | | || ||||||||||||||||||||||
Sbjct 518 CAATGCT-TCAACAAGTGGATCTTCCTCTTATCACGTACTTGCTGTTGAGCTTGACACTA 576
Query 428 TTTGGAACCCTGATTTTGAAGATATCGACCACAACCATGTGGGGATTGATGTGAACAGTC 487
|||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 577 TTTGGAACCCAGATTTCAAAGATATCGACCACAATCATGTGGGGATTGATGTGAACAGTC 636
Query 488 CTTTGTCAGTTGGGACAGCTTCTGCATCTTACTATTCCGACAT-AAAGGGGAAG-AACGA 545
|| | || || | | |||||| |||||||||||||||||||| |||||| | | |||||
Sbjct 637 CTATATCTGTCGCAATAGCTTCAGCATCTTACTATTCCGACATGAAAGGG-A-GCAACGA 694
Query 546 AAGCATAAACCTCTTGAGCGGACATCCAATACAGGTTTGGGTTGATTATGAAGACAATAT 605
|||||||||||| || |||||| | || |||||||||||||| |||||||||| || | |
Sbjct 695 AAGCATAAACCTTTTAAGCGGAAACCCTATACAGGTTTGGGTGGATTATGAAGGCACTTT 754
Query 606 GCTTAATGTTTCGATGGCTCCTCGTGAAGTCCAGAAGCCAAGTCGGCCTCTTTTGTCACA 665
||| ||||| ||||| ||||||| ||||||||||||||||| ||| |||||||| |||||
Sbjct 755 GCTCAATGTGTCGATTGCTCCTCTTGAAGTCCAGAAGCCAACTCGACCTCTTTTATCACA 814
Query 666 ACACATCAATCTTTCAGATA-TTTACCCGAACAGA--A-GACT-TTTCGTTGGATTCTCT 720
| |||||| ||| |||| | ||| || || ||| | | || ||| | ||| ||||||
Sbjct 815 CCCCATCAACCTTACAGA-ACTTTTTCCAAATAGATCAAGTCTGTTT-GCTGGGTTCTCT 872
Query 721 GCAGCAACAGGGACAGCTATCAGTTATCAGTATGTTCTTTCATGGAGTTTTAGCACAAGC 780
||||||||||||||||| |||||| | || ||| |||| | ||||||||||||||||||
Sbjct 873 GCAGCAACAGGGACAGCGATCAGTGACCAATATATTCTCTGGTGGAGTTTTAGCACAAGC 932
Query 781 AGAGGATCACTGCAGCGATTTGACATCTCAAGACTCCCTGAAGTTCCTCATCCTAGAGCT 840
|||||||| ||||||||| |||| ||||||| ||| ||||||||||||||||||||||||
Sbjct 933 AGAGGATCGCTGCAGCGACTTGATATCTCAAAACTTCCTGAAGTTCCTCATCCTAGAGCT 992
Query 841 GAACATAAGAACCTATCTCCATTGTTTATTGACCTGCTTGGTTT-TCTGGCTATCATGG- 898
||||||||| ||||| | || ||||| |||| | ||| ||||||||| |||
Sbjct 993 CCACATAAGAAAGTATCTAGACTGATTATTCTTCTGCCCG-TTTGTCTGGCTATTTTGGT 1051
Query 899 GCTTG--TGTACTCTTACTGGAATGTATTTTTTCAAGAGGGGCAAGTATGCAGAAATAAC 956
| ||| ||| |||| | || | ||||| || ||| |||||||| ||||| || |
Sbjct 1052 G-TTGGCTGT--TCTTGCAGGGCTTTATTTCCGCAGGAGACGCAAGTATTCAGAAGTATC 1108
Query 957 CGAAGA-ATGGGAAAATGAATTTGGTGCACATCGGTTCTCTTACAAATCCTTGTACAAAG 1015
||| | ||||||||| || |||| ||| |||||||||||||||| ||||||| |||||
Sbjct 1109 TGAA-ACATGGGAAAAGGAGTTTGATGCGCATCGGTTCTCTTACAGGTCCTTGTTCAAAG 1167
Query 1016 CAACAAAAGGGTTTCA-CAAGGATGGATTTCTTGGAAAAGGAGGTTTTGGAGAAGTCTAC 1074
||||||| ||||| || ||| |||| |||||| ||||||||||||||||||||||| ||
Sbjct 1168 CAACAAAGGGGTT-CAGCAAAGATGAATTTCTCGGAAAAGGAGGTTTTGGAGAAGTTTAT 1226
Query 1075 AGAGGAAAACT-CCTTTTAAG-CAGAGAAAAAGCTGTGAAGAGAATGTCACATGATGGTG 1132
|||||||| || || ||| |||||||| ||| ||||||||| |||| ||| ||||||
Sbjct 1227 AGAGGAAATCTGCCAC--AAGGCAGAGAAATAGCAGTGAAGAGAGTGTCCCATAATGGTG 1284
Query 1133 ATCAAGG-GTTGAAGCAATTTGTGGCAGAAGTGGTGAGCATGAGATGTCTGAAACATAGG 1191
|| |||| || |||||| |||||||| ||||| ||||||||||||||||||||||| |||
Sbjct 1285 ATGAAGGTGT-GAAGCAGTTTGTGGCTGAAGTCGTGAGCATGAGATGTCTGAAACACAGG 1343
Query 1192 AATCTTGTTCCACT-TCTTGGGTATTGCAGGAGAAAGC-ATGAGTTTCTCCTTGTCTCTG 1249
|||||||| ||||| | ||||||||||||| ||||| | | || |||| |||||||| |
Sbjct 1344 AATCTTGTACCACTGT-TTGGGTATTGCAGAAGAAAACGA-GAACTTCTTCTTGTCTCAG 1401
Query 1250 ATTACATGACCAATGGTAGTCTCGACGAGCATTTGTTTGATGACCAGAAACCGGTACTTT 1309
| |||||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1402 AGTACATGCCCAATGGTAGTCTTGACGAGCATTTGTTTGATGACCAGAAACCGGTTCTTT 1461
Query 1310 CTTGGCCACAAAGACTTGTGATTATTAAGGGTATTGCATCTGCTCTCTGTTACCTTCATA 1369
||||| |||||||||||||| || |||||||||| || ||||||||||| ||||| ||||
Sbjct 1462 CTTGGTCACAAAGACTTGTGGTTGTTAAGGGTATAGCCTCTGCTCTCTGGTACCTGCATA 1521
Query 1370 CAGGTGCTGACCAAGTTGTTCTGCACCGAGATATCAAAGCTTCAAACATTATGTTGGATG 1429
|||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| || |
Sbjct 1522 CAGGTGCTGACCAAGTTGTTCTACACCGAGATGTCAAAGCTTCCAACATTATGTTAGACG 1581
Query 1430 CTGAGTTCAATGGAAGGTTAGGGGATTTTGGTATGGCCAGTTTTCATGACCATGGAGGCA 1489
| ||||| ||||||||||||||||||||||| |||||||| |||||||| || |||||||
Sbjct 1582 CGGAGTTAAATGGAAGGTTAGGGGATTTTGGCATGGCCAGGTTTCATGAGCACGGAGGCA 1641
Query 1490 -TCTCAGACT-CAACATGC-GCCGTTGGGA-CTATTGGGTACATGGCGCCAGAGATACTT 1545
| ||| || ||||| || || || |||| || | |||||||||||||| ||| || |
Sbjct 1642 ATG-CAG-CTACAACA-GCAGCTGT-GGGAACTGTAGGGTACATGGCGCCGGAGCTAATC 1697
Query 1546 TATA-TGGGAGCTTCCACTAGAACTGATGTGTATGCCTTTGGTGTTTTCATGGTTGAAGT 1604
| | |||||||||||||| |||||||||| ||||| ||||||||||||||| |||||||
Sbjct 1698 -ACAATGGGAGCTTCCACTGGAACTGATGTTTATGCTTTTGGTGTTTTCATGCTTGAAGT 1756
Query 1605 AACATGTGGGAGGAGACCTGTGGAACCACAGTTGCAACTTGAGAAACAA-ATTCTGATCG 1663
||| ||||||||||||||||||||||| ||||||||| ||||||||| | || |||||
Sbjct 1757 AACCTGTGGGAGGAGACCTGTGGAACCGCAGTTGCAAGTTGAGAAACGACATA-TGATCA 1815
Query 1664 AATGGGT 1670
|||||||
Sbjct 1816 AATGGGT 1822
> Ahg937207 jgi|Araly1|937207|scaffold_501398.1
Length=2053
Score = 719 bits (389), Expect = 0.0
Identities = 1234/1629 (76%), Gaps = 109/1629 (7%)
Strand=Plus/Plus
Query 56 TCTCAAGTCAGCAAGAGACA-AGTTTTGTCTATGAA--ACTTTTCGCAGCCAAGAAAATC 112
|||||||||| || |||||| || ||| |||| || | ||| | |||||||| |||
Sbjct 76 TCTCAAGTCAACAGGAGACAGAG-TTTATCTA-CAATGGC-TTT-G--GCCAAGAAGATC 129
Query 113 TTTAT-CTTGAT-GGATCGGCAACAGTACTTCCCAATGGATTATTGCAGCTT-ACAAATG 169
||||| | |||| || | | ||| | | ||||| || ||| | |||||| || || |||
Sbjct 130 TTTATAC-TGATGGGGTTGCCAA-AATTCTTCCTAAAGGACTGTTGCAG-TTGACCGATG 186
Query 170 CTTCC-GATCATCAGATGGCTCATGTTTTCTACAAGGA-CTCAATTGAGCTCAGTTCCTC 227
|||| || || | |||| ||||| |||| |||| | | | ||||| ||| ||| ||
Sbjct 187 GTTCCGGA-CAGAAAATGGGTCATGCCTTCTTCAAGAAGC-CTTTTGAGTTCAATTCATC 244
Query 228 TAAACCACTCTCCTTCTCAACACACTTCGTTTGCGCTCTAGTGCCTCAGCCTGGAGTTGA 287
| || || |||| ||||||||||| || || || || || |||||| |||| ||| || |
Sbjct 245 TGAATCATTCTCTTTCTCAACACATTTTGTGTGTGCGCTGGTGCCTAAGCCAGGA-TTTA 303
Query 288 -AGGTGGCCATGGAATGGCCTTTGTAGTATCTCCTTCTATGGATTTCTCACATGCAGAAT 346
||||| ||||| || |||||||| ||||| |||| |||||| || ||||||||||
Sbjct 304 TTGGTGGTCATGGCATTGCCTTTGTTTTATCTGCTTCCATGGATCTCACACATGCAGACG 363
Query 347 CAACTAGA-TACTTGGGGA-TTTTCAACGTATC-AAAAAATGGATCTCCC-TCTTCTAAT 402
|||| | | | ||| |||| |||| ||| | || | || ||||| ||| |||||| ||
Sbjct 364 CAAC-ACAGTTCTT-GGGACTTTTTAACATCTCGACTCAA-GGATC-CCCTTCTTCTCAT 419
Query 403 GT-GCTTGCTGTTGAGCTTGACACT-ATTTGGAACCCTGATTTTGAAGATATCGA-CCAC 459
| | ||||||||||||| |||||| | | |||| ||||| || || || | |
Sbjct 420 CTAG-TTGCTGTTGAGCTAGACACTGCCCT-CAGTGCTGAGTTTGATGACATTGATGC-C 476
Query 460 AACCATGTGGGGATTGATGTGAACAGTCCTT-TGTCAGT-TGGGA-C-AGCTTCTGCATC 515
|| ||||| || |||||||| || || |||| |||| | | | | | | |||| || |
Sbjct 477 AATCATGTTGGAATTGATGTCAATAG-CCTTATGTC--TATCGCATCTA-CTTCGGCGGC 532
Query 516 TTACTATTCCGACATA-AAGGGGAAGAACGAAAGCATAAACCTCTTGAGCGGACATCCAA 574
||||| |||||| ||| | |||| ||||| |||||||||| || || || ||| |||| |
Sbjct 533 TTACTTTTCCGAGATAGATGGGG-AGAACAAAAGCATAAAGCTTTTAAGTGGAGATCCTA 591
Query 575 TACAGGTTTGGGTTGATTAT-GAAGACAATATGCTTAATGTTTCGA-TGGCTCCTCGTGA 632
| || |||||||| || ||| || || ||| | ||||||||| | | |||| |||| | |
Sbjct 592 TTCAAGTTTGGGTGGACTATGGAGGA-AATGTACTTAATGTTAC-ACTGGCCCCTCTTAA 649
Query 633 AGTCCAGAAGCCAAGTCGGCCTCTTTTGTC-ACAACACATCAATCTTTCAG--ATATTTA 689
| | ||||||||||| |||||||||||||| | | | |||||| ||||||| | ||||
Sbjct 650 AATTCAGAAGCCAAGCCGGCCTCTTTTGTCAAGATC-CATCAACCTTTCAGAAACATTT- 707
Query 690 CCCGAACAG-AAGACT-TTTCGTTGGATTCTCTGCAGCAACAGGGACAGCT-ATCAGTTA 746
|| | | || ||| | |||| |||| ||||||| ||||||||||||| | ||||| ||
Sbjct 708 CCAG-ATAGAAAG-TTCTTTC-TTGGGTTCTCTGGAGCAACAGGGACA-TTGATCAGCTA 763
Query 747 TCAGTATGTTCTTTCATGGAGTTTTAGCACAAGCAGAGG-ATCACTGCAG-CGATTTGAC 804
|| || | || ||||||||||||| || || ||| ||| ||||| | ||||
Sbjct 764 CCAATACATACTCGGGTGGAGTTTTAGCAGAAACA-AGGTGTCATTGCAGAC-CCTTGAT 821
Query 805 ATCTC-AAGACTCCCT-GAAGTTCCTCATCCT-AGAGCTGAACATAAGA-ACCTATCTCC 860
|| | || ||| ||| | ||||||||||||| || ||| || |||||| ||| |||
Sbjct 822 GTCACTAA-ACTTCCTCG-AGTTCCTCATCCTAAG-GCTAAAAATAAGAGACC-ATCAGG 877
Query 861 ATTGTTTATTGACCTGCTTGGTTTTCTGGCTATCAT-GGGCTTGTGTACTCTTACTGGA- 918
|| |||||| ||||| ||||||||| ||||| | || || ||||| | |
Sbjct 878 GGTGCTTATTGTTCTGCTCATTTTTCTGGCAATCATAGTATTTTTG-GCTCTTGGAGCAG 936
Query 919 ATGTATTTTTTCAAGAG-GGGCAAGTATGCAGAAATAACCGAAGAATGGGAAAATGAATT 977
| ||| ||| || ||| || || ||||||||||||| |||||||||||||| ||||
Sbjct 937 CT-TATGTTTACAGGAGAAGG-AAATATGCAGAAATAAGAGAAGAATGGGAAAAAGAATA 994
Query 978 TGGTGCACATCGGTTCTCTTA-CAA-ATCCTTGTACAAAGCAACAAAAGGGTTTCACAAG 1035
|||| |||| || || ||||| || || | |||||| ||||| || |||||| |||||
Sbjct 995 TGGTCCACACCGTTTTTCTTATAAAGAT-C-TGTACACTGCAACGAATGGGTTTAACAAG 1052
Query 1036 GATGGATTTCTTGGAAAAGGAGGTTTTGGAGAAGTCTACAGAGGAAAACT-CCTT-TTAA 1093
|||||| ||||||||||||||||||||||| |||| |||| ||||| || |||| ||
Sbjct 1053 GATGGACTTCTTGGAAAAGGAGGTTTTGGAAAAGTTTACAAAGGAACTCTGCCTTCCAAA 1112
Query 1094 GCAGAGAAAAAGCTGTGAAGAGAATGTCACATGATGGTGATCAAGGGTTGAAGCAATTTG 1153
| || ||| ||| ||||| ||| |||| || |||| || ||||| ||||||| ||||
Sbjct 1113 G--GACAAATAGCAGTGAAAAGAGTGTCCCACGATGCAGAGGAAGGGATGAAGCAGTTTG 1170
Query 1154 TGGCAGAAGTGGTGAGCATGAG-ATGTCTGAAACATAGGAATCTTGTTCCACTTCTTGGG 1212
|||| ||| | ||||||||| | | |||||| || | |||| | |||||||||| ||||
Sbjct 1171 TGGCTGAAATCGTGAGCATGGGCA-ATCTGAAGCACAAGAATATGGTTCCACTTCATGGG 1229
Query 1213 TATTGCAGGAG-AAAGCATGAGTTTCTCCTTGTCTCTGATTACATGACCAATGGTAGTCT 1271
||||| || || |||| |||||| || || || ||||| |||||| |||||||||||||
Sbjct 1230 TATTGTAGAAGAAAAG-GTGAGTTACTTCTGGTATCTGAATACATGCCCAATGGTAGTCT 1288
Query 1272 CGACGAGCATTTGTTTGATGACCAGAAACCGGTACTTTCTTGGCCACAAAGACTTGTGAT 1331
||| | | || || ||||| | |||||| | |||| |||| | ||||||||| ||
Sbjct 1289 TGACCAATACTTATTCAATGACGAAAAACCGCCATTTTCATGGCGTCGAAGACTTGTAAT 1348
Query 1332 TATTAAGGGTATTGCATCTGCTCTCTGTTACCTTCATACAGGTGCTGACCAAGTTGTTCT 1391
|| |||| |||||| ||||||||| |||| | |||||||| ||| ||||||||||||
Sbjct 1349 CATCAAGGATATTGCTTCTGCTCTCAATTACATGCATACAGGAGCTCCCCAAGTTGTTCT 1408
Query 1392 GCACCGAGATATCAAAGCTTCAAACATTATGTTGGATGCTGAGTTCAATGGAAGGTTAGG 1451
||||| |||||||| ||||| || ||||||| || ||||| || ||||||||||||||
Sbjct 1409 CCACCGGGATATCAAGGCTTCTAATGTTATGTTAGACGCTGAATTTAATGGAAGGTTAGG 1468
Query 1452 GGATTTTGGTATGGCCAGTTTTCATGACCATGGAGGCA-TCTCAGACT-CAACATGC-GC 1508
||| ||||||||||| || |||||||| ||||| |||| | | | || |||| ||| ||
Sbjct 1469 GGACTTTGGTATGGCAAGGTTTCATGATCATGG-GGCAGACCCTG-CTACAAC-TGCTGC 1525
Query 1509 CGTTGGG-ACTATTGGGTACATGGCGCCAGAGATACTT-TATA-TGGGAGCTTCCACTAG 1565
| |||| || ||||| |||||||| |||||| | || || | |||||||| ||| |
Sbjct 1526 TG-TGGGAACCATTGGCTACATGGCACCAGAGCT--TTCTACAGGGGGAGCTTGCAC-GG 1581
Query 1566 -AACTGATGTGTATGCCTTTGGTG--TTTTCATGGTTGAAGTAACATGTGGGAGGAGACC 1622
||||||||||||| |||||||| |||| | |||||||||||||||||||||||||
Sbjct 1582 CCACTGATGTGTATGGCTTTGGTGCCTTTT--TACTTGAAGTAACATGTGGGAGGAGACC 1639
Query 1623 TGTGGAACC 1631
|||||||||
Sbjct 1640 TGTGGAACC 1648
> Ahg496163 jgi|Araly1|496163|fgenesh2_kg.8__1979__AT5G60270.1
Length=2222
Score = 531 bits (287), Expect = 9e-150
Identities = 1157/1554 (74%), Gaps = 151/1554 (10%)
Strand=Plus/Plus
Query 155 TGCAGCTTACAAATGCTTCCGATCA-TCAGAT-GGCTCATGTTTTCTACAAGGA-CTCAA 211
|||| || |||||||| || || | || || || ||||||||||||| || | | | |
Sbjct 170 TGCAACTGACAAATGCAACCAAT-AGCCAAATAGG-TCATGTTTTCTACGAGAAGC-CGA 226
Query 212 TTGAGCTCAGTTCCTCTAAACCACTCTCCTTCTCAACACACTTCGTTTGCGCTCTAGTGC 271
||||| ||| || ||| || || |||| ||||| ||||| || || || | | | ||
Sbjct 227 TTGAGTTCAAATCATCTGAATCAGTCTCGTTCTCGACACATTTTGTGTGTG--C-ACTG- 282
Query 272 CTCAGCCTGGAGTTGA--AG-GTGGCCATGGAATGGCCTTTGTAGTATCTCCTTCTA-TG 327
||| |||| || ||| | |||||||||| ||| ||||| | || |||| ||| | |
Sbjct 283 CTC--CCTGCAGGTGATCCGAGTGGCCATGGCATGACCTTTTTTGTTTCTCATTCCACT- 339
Query 328 GATTTCTCACATGCAGAATCAACTAGATACTTGGGGATTTTCAACGTATCAAAAAATGGA 387
|||||| | | ||||| ||||| ||||||| ||| ||||| | | | | |||||||
Sbjct 340 GATTTCAAAGACGCAGAGGCAACTCGATACTTCGGGCTTTTC-A---A-C-AGAAATGGA 393
Query 388 TCTCCCTCTTCTA-ATGTGCTT-GCTGTTGAGCTTGACAC-TATTTGGAACCCTGATTTT 444
||| | || | | |||| || ||||| ||||||||||| | | | | || || | |
Sbjct 394 TCTACTTCCAC-ACGTGTG-TTGGCTGTAGAGCTTGACACTTCTCTAGCTTCC-GA-TGT 449
Query 445 G-AAGATATCGACCACAACCATGTGGGGATTGATGTGAACAGTCCTTTGTCAGT-TGGGA 502
| |||| ||| | | || ||||| ||||||||||||||||| | | ||| || ||
Sbjct 450 GAAAGACATCAATGATAATCATGTTGGGATTGATGTGAACAG--C-GCG-GAGTCTGTGA 505
Query 503 CAGCT-TC--TGCATCTTACTATTC-C-GACATAA-AGGGGAAGAACGAAAG-CATAAAC 555
|| || | ||| ||||| | ||| | |||| || | |||||||| | || ||||||
Sbjct 506 CATCTGCCAATGCTTCTTA-T-TTCTCAGACA-AAGAAGGGAAGAA-TATAGACATAAAA 561
Query 556 CTCTTGAGCGGACATCCAATACAGGTTTGGGTTGATTATGAA-GA-CAATATGCTTAATG 613
|||||||| || |||| || ||||||||||| || |||||| || || | || || |
Sbjct 562 CTCTTGAGTGGTGATCCTATCCAGGTTTGGGTGGACTATGAAGGATTAACA--CTCAACG 619
Query 614 TTTCGA-TGGCTCCTCGTGAAGTCCAGAAGCCAAGTC-GGCCTCTTTTGTC-ACAACA-- 668
|||| | ||||||||| | || | |||| ||||| | | ||||||||||| |||||
Sbjct 620 TTTC-ATTGGCTCCTCTTAAAAACAAGAAACCAAG-CAGACCTCTTTTGTCGTCAACATC 677
Query 669 CATCAATCTTTCAGATA-TTTACCCGAACAGAAGACT-TTTCGTTGGATTCTCT-GCAGC 725
|||||||||| | |||| ||| | | |||||| | ||| || || || ||| || |
Sbjct 678 CATCAATCTTACTGATATTTTGCAAG-GTAGAAGAATGTTT-GTCGGGTTTTCTGGC-TC 734
Query 726 AACAGGGAC-AGCTATCAGTTATCAGTATGTTCTTTCATGGAGTTTTAGCACAAGCAGAG 784
||| ||| | ||| || ||||| ||||| | || |||||||| |||| ||||| |
Sbjct 735 AACCGGGTCAAGC-ATGAGTTACCAGTACATACTCGGGTGGAGTTTCAGCAAAAGCA-TG 792
Query 785 G-ATCACTGC--AGCGATTTGACATCTCAAGAC-TCCCTGAAGTTCCTCATC-CTAG-AG 838
| || |||| | | | |||||||||||| || |||| |||||||||| | |||| |
Sbjct 793 GCGTCTCTGCTGAAC-A-TTGACATCTCAAAACTTCCC-AAAGTTCCTCA-CACTAGCA- 847
Query 839 CTGAACATAAGAA-CCT--ATCTCCAT-TGTTTATTGACCTGCTTGGTTTTCTGGCTATC 894
|| || | ||||| || |||||| | || | || ||||||||||| | || ||
Sbjct 848 CT-AA-A-AAGAAGTCTACATCTCC-TATGCTCGGTGTTCTGCTTGGTTTAATAACTTTC 903
Query 895 ATGGGCTTGTGTACTCTTACTGGA-ATGTATTT-TTTCAAGAGGGGCAAGTATGCAGAAA 952
|| | ||| | | |||| || | | ||||| | | | ||| | ||| || |||
Sbjct 904 ATAGTTTTGGGGATTCTTGTTGCAGCT-TATTTGTAT-AGGAGAAACTTGTACGCTGAAG 961
Query 953 TAACCGAAGAATGGGAAAATGAATTTGGTGCACATC-GGT-TCTCTTACAAATCCT-TGT 1009
||| || ||||||||||| || | |||| ||| || ||| | || ||||||| || | |
Sbjct 962 TAAGAGAGGAATGGGAAAAGGAGTATGGTCCAC-TCAGGTAT-TCCTACAAAT-CTCTAT 1018
Query 1010 ACAAAGCAACAAAAGGGTTTCACA-AGGA-TGGATTTCTTGGAAAAGGAGGTTTTGGAGA 1067
||||||||||||||||| |||| | |||| || ||||||||| | |||||||||||| ||
Sbjct 1019 ACAAAGCAACAAAAGGG-TTCA-ATAGGACTGAATTTCTTGGGAGAGGAGGTTTTGGTGA 1076
Query 1068 AGTCTACAGAGGAAAACTCCTTTTAAGC--AG-A--GA-A-AA--AGCTGTGAAGAGAAT 1118
|||||||| ||||| |||| | ||| || | || | || |||||||||| || |
Sbjct 1077 AGTCTACAAAGGAACTCTCCCTCGGAGCAGAGAACTGAGAGAAGTAGCTGTGAAGCGAGT 1136
Query 1119 GTCACATGATGGTGATCAAGGGT-TGAAGCAATTTGTGGCAGAAG-TGGTGAGCATGA-G 1175
|||||||||||||| | ||||| ||||||||||||| || | || | |||||||||| |
Sbjct 1137 ATCACATGATGGTGAGC-AGGGTATGAAGCAATTTGTTGCTG-AGATCGTGAGCATGAGG 1194
Query 1176 ATGTCTGAAACATAGGAATCTT-GTTCCACTTCTTGGGTATTGCAGGAGAAAGCATGAGT 1234
| || | ||||| || | ||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1195 A-GTTTAAAACACCGG-AGCTTGGTTCCACTTCTTGGGTATTGCAGGAGAAAACATGAGT 1252
Query 1235 T-TCTCCTTGTCTCTGATTACATGACCAA-TGGTAGTCTCGACGAGCATTTGTTTGATGA 1292
| | | || || ||||| |||||| |||| ||||||||| ||| | | |||||| || |
Sbjct 1253 TAT-TACTGGTGTCTGAGTACATG-CCAAATGGTAGTCTTGACCATTACTTGTTTAATCA 1310
Query 1293 CCAGAAACCGGTACT-TTCT-TGGCC-ACAAAGACTTGTGATTATTA-AGGGTATTGCAT 1348
| | | | | || ||| ||| | || |||| | ||| ||| || || ||||
Sbjct 1311 TGATAGATTG-T-CTCTTCCCTGGTGGAGAA-GACTCGCGATCCTTAGAGAC-ATCGCAT 1366
Query 1349 CTGCTCTCT-GTTACCTT-CATACAGGTGCTGACCAAGTTGTTCTGCACCGAGATATCAA 1406
| ||||| | ||||| || ||||||| ||||||||||||||| | ||| ||||||||||
Sbjct 1367 CAGCTCT-TAGTTAC-TTACATACAGAAGCTGACCAAGTTGTTATACACAGAGATATCAA 1424
Query 1407 AGCTTCAAACATTATGTTGGATGCTGAGTTCAATGGAAGGTTAGGG-GATTTTGGTATGG 1465
|||| |||| |||||||||| || ||||||||||||||||| ||| ||||||||||||
Sbjct 1425 AGCTGCAAATGTTATGTTGGACGCAGAGTTCAATGGAAGGTT-GGGTGATTTTGGTATGT 1483
Query 1466 CCAGTTT-TCATGACC-ATGGAGGC--ATCTCAGACT-CAACATGC-GCCGTTGGGA-CT 1518
|||| || | ||||| | || ||| ||| || | | ||||| || || || |||| ||
Sbjct 1484 CCAGGTTAT-ATGACAGA-GG-GGCTGATC-CA-AGTACAACA-GCTGCAGT-GGGAACT 1536
Query 1519 ATTGGGTACATGGCGCCAGAGAT-ACTTTATATGGGAGCTTCCACTAGAACTGATGTGTA 1577
|||| ||||||||||| ||| | || | ||||||||||||||| |||||||||||||
Sbjct 1537 GTTGGTTACATGGCGCCTGAGCTTACAACA-ATGGGAGCTTCCACTGGAACTGATGTGTA 1595
Query 1578 TGCCTTTGGTGTTTTCATGGTTGAAGTAACATGTGGGAGGAGACCTGTGGAACC 1631
||| |||||||||||| || |||||||||| |||||||||||||||||||||||
Sbjct 1596 TGCGTTTGGTGTTTTCTTGCTTGAAGTAACTTGTGGGAGGAGACCTGTGGAACC 1649
> Ahg937206 jgi|Araly1|937206|scaffold_501397.1
Length=2046
Score = 329 bits (178), Expect = 4e-89
Identities = 548/722 (76%), Gaps = 44/722 (6%)
Strand=Plus/Plus
Query 940 AAGTATGCAGAAATAACCGAAGAATGGGAAAATGAATTTGGTGCACATCGGT-TCTCTTA 998
|||||||||||| ||| ||| |||||||| |||| || |||| || | | || ||
Sbjct 981 AAGTATGCAGAAGTAAGAGAATCGTGGGAAAAGGAATACGGCCCACACCGATAT-TCCTA 1039
Query 999 CAAATCCT-TGTACAAAGCAACAAAAGGGTTTCACAAGGATGGAT-TTCTTGGAAAAGGA 1056
||| | || |||||||||||||||| |||||| ||| ||| | | || |||| |||||
Sbjct 1040 CAAGT-CTCTGTACAAAGCAACAAATGGGTTTGTCAAAGAT-GCTCTTGTTGGGAAAGGT 1097
Query 1057 GGTTTTGGAGAAGTCTACAGAGGAAAACT-CCTTTTAAGCAGAG-AAAAAGCTGTGAAGA 1114
|| |||||| |||| |||| ||||| || || || | ||| || | | ||||||||| |
Sbjct 1098 GGGTTTGGAAAAGTTTACAAAGGAACTCTGCC-TTCAGGCA-AGCATATAGCTGTGAAAA 1155
Query 1115 GAATGTCACATGATGGTGATCAAGGGTTGAAGCAATTTGTGGCAGAAGTGGTGAGC-ATG 1173
|| | || ||||||| || |||||| |||| || |||||||||||||| || | | |||
Sbjct 1156 GACTATCCCATGATGCAGAGCAAGGGATGAAACAGTTTGTGGCAGAAGTCGT-AACGATG 1214
Query 1174 AGATGTCTGA-AACATAGGAATCTT-GTTCCACTTCTTGGGTATTGCAGGAG-AAAGCAT 1230
|| | | | ||||| | || ||| ||||| |||||||||||||| || || |||| |
Sbjct 1215 GGAAAT-TTACAACATCGCAA-CTTGGTTCCTCTTCTTGGGTATTGTAGAAGAAAAG-GT 1271
Query 1231 GAGTTTCTCCTTGTCTCTGATTACATGACCAATGGTAGTCTCGACGAGCATTTG-TTTGA 1289
||||| || || |||||||| |||||| |||| |||||||| ||| || | ||| ||||
Sbjct 1272 GAGTTGCTACTGGTCTCTGAGTACATGCCCAACGGTAGTCTTGACCAGTACTTGTTTTG- 1330
Query 1290 TGACCAGAAACCGGT-ACTTTCTTGGCCACAAAG-ACTTGTGATTATTAAGGGTATTGCA 1347
| |||| ||||| | ||||| ||| ||||| | || | ||| |||||| || ||
Sbjct 1331 TAACCA-AAACCCATCTCTTTCATGGTTGCAAAGAATTTCT-ATTCTTAAGGACATCGCC 1388
Query 1348 TCTGCTCTCTGTTACCTTCATACAGGTGCTGA-CCAAGTTGTTCTGCACCGAGATATCAA 1406
|| |||||| |||||| |||||||| || | || || |||| ||||||| ||||| ||
Sbjct 1389 TCGGCTCTCAATTACCTGCATACAGGAGCCAATCC-AGCTGTTTTGCACCGGGATATAAA 1447
Query 1407 AGCTTCAAACATTATGTTGGATGCTGAGT-TCAATGGAAGGTTAGGGGATTTTGGTATGG 1465
|||||| || | ||||| ||| |||||| | |||||||| ||||| |||||||||||||
Sbjct 1448 AGCTTCTAATGTCATGTTAGATTCTGAGTAT-AATGGAAGATTAGGAGATTTTGGTATGG 1506
Query 1466 CC-AGTTTTCATGACCATGGAG-GCATCTCAGACT-CAACATGC-GCCGTTGGG-ACTAT 1520
|| || ||||| |||| || | | || | || ||||| || || | |||| || ||
Sbjct 1507 CCAAG-TTTCAGGACCCCCAAGCGAACCT-A-TCTGCAACA-GCTGCTG-TGGGAACCAT 1561
Query 1521 TGGGTACATGGCGCCAGAGATACTTTA-TA-TGGGAGCTTCCACTAG-AACTGATGTGTA 1577
|| |||||||| || ||| || | | | | ||| |||| | || ||||||||||||
Sbjct 1562 AGGTTACATGGCACCTGAGCTA-ATAAGAACT-GGAACTTCTA-AAGAAACTGATGTGTA 1618
Query 1578 TGCCTTTGGTGTTTTCATGGTTGAAGTAACATGTGGGAGGAGACCTGTGGAACCACAGTT 1637
|||||||||||||||| | ||||||||| ||||| ||| ||||| | |||||| ||||
Sbjct 1619 TGCCTTTGGTGTTTTCCTTCATGAAGTAACTTGTGGAAGGCGACCTTTTGAACCAGAGTT 1678
Query 1638 GC 1639
||
Sbjct 1679 GC 1680
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69514697125
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5