BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G60615.1 Length=240 Score E Sequences producing significant alignments: (Bits) Value Ahg496210 jgi|Araly1|496210|fgenesh2_kg.8__2026__AT5G60615.1 377 2e-104 > Ahg496210 jgi|Araly1|496210|fgenesh2_kg.8__2026__AT5G60615.1 Length=240 Score = 377 bits (204), Expect = 2e-104 Identities = 229/241 (95%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 1 ATGGCTTCATCAAGATTTCAACTTGTTGCTCTTCTCGTCGTCTTCTCTCTCGTTATTAGT 60 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1 ATGGCTTCATCAAGATTTCAACTTGTTGCTCTTCTCGTCATCTTCTCTCTCGTTATTAGT 60 Query 61 ATTACTG-CAAATTCCGTAGAGAAAGACGTAATGGACGGACCATGCCGCTTAAGAGGAAC 119 ||||||| | || |||| ||| ||||| |||||||||||||||||||||||||||||||| Sbjct 61 ATTACTGCCCAA-TCCGCAGAAAAAGAAGTAATGGACGGACCATGCCGCTTAAGAGGAAC 119 Query 120 GTGCAACAACGACGGCGACTGCGACAAGCATTGTCACAGGAGCACCGACGCTGCAGCCAT 179 ||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||| Sbjct 120 GTGCAACAACGACAGCGACTGCGACAAACATTGTCACAGGAGCACCGACGCTACACCCAT 179 Query 180 GGACGGCCACTGCCTCTTCGACAAACCCACCGGTCCTGTTTGTTGCTGCTTATTTGATTA 239 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 180 GGACGGTCACTGCCTCTTCGACAAACCCACCGGTCCTGTTTGTTGCTGCTTATTTGATTA 239 Query 240 A 240 | Sbjct 240 A 240 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 8286852637 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5