BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G60690.1
Length=3502
Score E
Sequences producing significant alignments: (Bits) Value
Ahg496218 jgi|Araly1|496218|fgenesh2_kg.8__2034__AT5G60690.1 4619 0.0
Ahg314555 jgi|Araly1|314555|fgenesh1_pm.C_scaffold_1003335 178 3e-43
Ahg491408 jgi|Araly1|491408|fgenesh2_kg.7__841__AT4G32880.1 122 1e-26
> Ahg496218 jgi|Araly1|496218|fgenesh2_kg.8__2034__AT5G60690.1
Length=3212
Score = 4619 bits (2501), Expect = 0.0
Identities = 3020/3255 (93%), Gaps = 97/3255 (3%)
Strand=Plus/Plus
Query 34 tttctctctcttcctctttta-t--tcctctGTTCCAAAGTTCAGCAGAAGCAAACACAC 90
||||||||||||| ||||||| | ||||||||| | ||||||| ||||||| || ||||
Sbjct 21 TTTCTCTCTCTTCATCTTTTATTCCTCCTCTGTT-CTAAGTTCACCAGAAGC-AA-ACAC 77
Query 91 ACATCACTTA--CTAtctctctct-c--cttcttcactttctcacataaccaaactctct 145
|||||||||| || ||||||||| | ||||||||||||||||||||||| ||
Sbjct 78 ACATCACTTACTCTCTCTCTCTCTCCTTCTTCTTCACTTTCTCACATAACCCAA------ 131
Query 146 ctttctctcttttttttGAAGTCTCCTTTGAAACTATAATTGCCCTTTAGTGTTGTTCGT 205
||||| |||||| |||||||| ||| || |||||||||||||||||||||||| |
Sbjct 132 ----CTCTC--TTTTTT-AAGTCTCC-TTG-AATTATAATTGCCCTTTAGTGTTGTTC-T 181
Query 206 TCAGAGTCTTCAAAACTTTTGCAGCTTCAATTGTACCTGGGT-TTCTTCTTCATTGTTCC 264
| || |||| || ||| | | ||| | | || | |||||||||||||||||
Sbjct 182 TTTCAG-CTTC--AA---TTGTA-C--CAA-CCT-CATGTTTCTTCTTCTTCATTGTTCC 230
Query 265 TAAGGTTTCTGTGTCCTTCAATTCTTCTGATATAATGCTTCTTTAAGAGAGTTGACATCA 324
||||||||||||||| | || ||||||| ||||||||| ||||||||||| ||| |
Sbjct 231 AAAGGTTTCTGTGTCC-TGAA---TTCTGATGTAATGCTTCCTTAAGAGAGTT--CAT-A 283
Query 325 TCACTTTCTTGGGGTACTCTTCTCTGTTTCTCCC-CAGAAAATCCAACTCTGTAATTTTG 383
|||||||||| || |||||||||||| |||| ||||||| ||||||||| |||||||
Sbjct 284 TCACTTTCTT-TGG---TCTTCTCTGTTT-TCCCTCAGAAAACCCAACTCTGCAATTTTG 338
Query 384 GGTCTTTATTCTGTTTTTCTCTTTGAAGAATCTTTAAAATTCTCAGATCTTCTGAATCTC 443
||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 339 GGT-GTTATTCTG-TTTTCTC-TTGAAGAATCTTTAAAATTCTCAGATCTTCTGAATCTC 395
Query 444 TCTTCTTTAAAACtttttttaactttattttttGTACTCG---CTTCTTTGCCTT-CATT 499
|||||| |||||| |||| ||||| |||||| | | | ||||||| || ||
Sbjct 396 TCTTCTCTAAAAC---TTTTCACTTTTTTTTTTTTTTTGGTTTCTTCTTTTATTTCCA-A 451
Query 500 TTTCTCGTATCCACATGTCGTTGGTCTTTCGCTACAAGCCACGACCGTAGAATCTTCTTT 559
|| |||| ||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct 452 ATTGTCGTTTCCACATGTCGTTGGTCTTTCGCTACAAGCCACGACCATAGAATCTTC-TT 510
Query 560 TGTCTGAAAAGAATTACAATTTACGTTTCTCTTACGAT---ACGACGGACTTTCCgaag- 615
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct 511 TGTCTGAAAAGAATTACAATTTACGTTTCTCTTAAGATACGACGACGGACTTTCCGAAGA 570
Query 616 aaattaatttaaagagaaaagaagaagaagccaaagaagaagaagaagctagaagaaACA 675
||| ||| |||||||| || ||||| ||||| | ||||||||||||| |||||||
Sbjct 571 AAACTAA-TTAAAGAG--AA-AAGAA-AAGCC-----A-AAGAAGAAGCTAG-AGAAACA 618
Query 676 GTAAAGTTTGAGAC---------tttttttGAGGGTCGAGCTAAAATGGAGATGGCGGTG 726
|||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct 619 GTAAAGTTTGAGACTTTGGTGTTTTTTTTTGAGGGTCGAGCAAAAATGGAGATGGCGGTG 678
Query 727 GCTAACCACCGTGAGAGAAGCAGTGACAGTATGAATAGACATTTAGATAGTAGCGGTAAG 786
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 679 GCTAACCACCGTGAGAGAAGCAGTGACAGTATGAATAGACATTTAGACAGTAGCGGTAAG 738
Query 787 TACGTTAGGTACACAGCTGAGCAAGTCGAGGCTCTTGAGCGTGTCTACGCTGAGTGTCCT 846
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 739 TACGTTAGGTACACGGCTGAGCAAGTGGAGGCTCTTGAGCGTGTCTACGCTGAGTGTCCT 798
Query 847 AAGCCTAGCTCTCTCCGTCGACAACAATTGATCCGTGAATGTTCCATTTTGGCCAATATT 906
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 799 AAGCCTAGCTCTCTCCGACGACAACAATTGATCCGTGAATGTTCCATTTTGGCCAATATC 858
Query 907 GAGCCTAAGCAGATCAAAGTCTGGTTTCAGAACCGCAGGTGTCGAGATAAGCAGAGGAAA 966
||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct 859 GAGCCTAAGCAGATCAAAGTCTGGTTTCAGAACCGGAGGTGTCGAGATAAGCAGCGGAAA 918
Query 967 GAGGCGTCGAGGCTCCAGAGCGTAAACCGGAAGCTCTCTGCGATGAATAAACTGTTGATG 1026
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 919 GAGGCGTCGAGGCTCCAGAGCGTAAATCGGAAGCTTTCTGCGATGAATAAACTGTTGATG 978
Query 1027 GAGGAGAATGATAGGTTGCAGAAGCAGGTTTCTCAGCTTGTCTGCGAAAATGGATATATG 1086
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 979 GAGGAGAATGATAGGTTGCAGAAGCAGGTTTCTCAGCTTGTATGCGAAAATGGATATATG 1038
Query 1087 AAACAGCAGCTAACTACTGTTG--T-TAACGATCCAAGCTGTGAATCTGTGGTCACAACT 1143
|| ||||||||||||||||||| | |||||||||||||||||||||||| |||||||||
Sbjct 1039 AAGCAGCAGCTAACTACTGTTGTATGTAACGATCCAAGCTGTGAATCTGTTGTCACAACT 1098
Query 1144 CCTCAGCATTCGCTTAGAGATGCGAATAGTCCTGCTGGATTGCTCTCAATCGCAGAGGAG 1203
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1099 CCTCAGCATTCGCTTAGAGATGCGAATAGTCCTGCTGGATTGATCTCAATCGCAGAGGAG 1158
Query 1204 ACTTTGGCAGAGTTCCTATCCAAGGCTACAGGAACTGCTGTTGATTGGGTTCAGATGCCT 1263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1159 ACTTTGGCAGAGTTCCTATCCAAGGCTACAGGAACTGCTGTTGATTGGGTTCAGATGCCT 1218
Query 1264 GGGATGAAGCCTGGTCCGGATTCGGTTGGCATCTTTGCCATTTCGCAAAGATGCAATGGA 1323
|||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||
Sbjct 1219 GGGATGAAGCCTGGTCCGGATTCGGTTGGCATCTTTGCTATTTCGCAAAGATGCAGTGGA 1278
Query 1324 GTGGCAGCTCGAGCCTGTGGTCTTGTTAGCTTAGAACCTATGAAGATTGCAGAGATCCTC 1383
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1279 GTGGCAGCTCGAGCCTGTGGTCTTGTTAGTTTAGAACCTATGAAGATTGCAGAGATCCTC 1338
Query 1384 AAAGATCGGCCATCTTGGTTCCGTGACTGTAGGAGCCTTGAAGTTTTCACTATGTTCCCG 1443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1339 AAAGATCGGCCATCTTGGTTCCGTGACTGTAGGAGCCTTGAAGTTTTCACTATGTTCCCG 1398
Query 1444 GCTGGTAATGGTGGCACAATCGAGCTTGTTTATATGCAGACGTATGCACCAACGACTCTG 1503
||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||
Sbjct 1399 GCTGGTAATGGTGGCACAATCGAGCTTGTGTATATGCAGACATATGCACCAACGACTTTG 1458
Query 1504 GCTCCTGCCCGCGATTTCTGGACCCTGAGATACACAACGAGCCTCGACAATGGGAGTTTT 1563
||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct 1459 GCTCCTGCCCGCGATTTCTGGACCCTGAGATACACTACGAGCCTTGACAATGGCAGTTTT 1518
Query 1564 GTGGTTTGTGAGAGGTCGCTATCTGGCTCTGGAGCTGGGCCTAATGCTGCTTCAGCTTCT 1623
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1519 GTGGTTTGTGAGAGGTCACTATCTGGCTCTGGAGCTGGGCCAAATGCTGCTTCAGCTTCT 1578
Query 1624 CAGTTTGTGAGAGCAGAAATGCTTTCTAGTGGGTATTTAATAAGGCCTTGTGATGGTGGT 1683
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1579 CAGTTTGTGAGAGCAGAAATGCTTTCTAGTGGGTATTTGATAAGACCTTGTGATGGTGGC 1638
Query 1684 GGTTCTATTATTCACATTGTCGATCACCTTAATCTTGAGGCTTGGAGTGTTCCGGATGTG 1743
||||| |||||||||||||| ||||||||||| || ||||||||||||||||||||||||
Sbjct 1639 GGTTCAATTATTCACATTGTTGATCACCTTAACCTCGAGGCTTGGAGTGTTCCGGATGTG 1698
Query 1744 CTTCGACCCCTTTATGAGTCATCCAAAGTCGTTGCACAAAAAATGACCATTTCCGCGTTG 1803
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 1699 CTTCGACCCCTTTATGAGTCCTCCAAAGTCGTTGCACAAAAAATGACTATTTCCGCGTTG 1758
Query 1804 CGGTATATCAGGCAATTAGCCCAAGAGTCTAATGGTGAAGTAGTGTATGGATTAGGAAGG 1863
|||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 1759 CGGTATATCAGGCAATTAGCGCAAGAGACTAATGGTGAAGTAGTGTATGGATTAGGAAGG 1818
Query 1864 CAGCCTGCTGTTCTTAGAACCTTTAGCCAAAGATTAAGCAGGGGCTTCAATGATGCGGTT 1923
||||| ||||||||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct 1819 CAGCCCGCTGTTCTTAGAACCTTTAGCCAAAGATTAAGCCGGGGTTTTAATGATGCGGTT 1878
Query 1924 AATGGGTTTGGTGACGACGGGTGGTCTACGATGCATTGTGATGGAGCGGAAGATATTATC 1983
||||| ||||| || |||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1879 AATGGCTTTGGGGATGACGGGTGGTCTACAATGCATTGTGATGGCGCGGAAGATATTATC 1938
Query 1984 GTTGCTATTAACTCTACAAAGCATTTGAATAATATTTCTAATTCTCTTTCGTTCCTTGGA 2043
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1939 GTTGCTATTAACTCTACAAAGCATTTGAATAATATTTCTAATTCTCTCTCGTTCCTTGGA 1998
Query 2044 GGCGTGCTCTGTGCCAAGGCTTCAATGCTTCTCCAAAATGTTCCTCCTGCGGTTTTGATC 2103
|| ||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1999 GGTGTGCTTTGTGCTAAGGCTTCAATGCTTCTCCAAAATGTTCCGCCTGCGGTTTTGATC 2058
Query 2104 CGGTTCCTTAGAGAGCATCGATCTGAGTGGGCTGATTTCAATGTTGATGCATATTCCGCT 2163
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2059 CGCTTCCTTAGAGAGCATCGATCCGAGTGGGCTGATTTCAATGTTGATGCATATTCCGCC 2118
Query 2164 GCTACACTTAAAGCTGGTAGCTTTGCTTATCC-GGGAATGAGACCAACAAGATTCACTGG 2222
||||||||||||||||||| |||||||||||| |||| ||||||| ||||| ||||||||
Sbjct 2119 GCTACACTTAAAGCTGGTACCTTTGCTTATCCAGGGA-TGAGACCGACAAGGTTCACTGG 2177
Query 2223 GAGTCAGATCATAATGCCACTAGGACATACAATTGAACACGAAGAAATGCTAGAAGTTGT 2282
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 2178 GAGTCAGATCATAATGCCACTAGGGCATACAATTGAACACGAAGAAATGCTTGAAGTTGT 2237
Query 2283 TAGACTGGAAGGTCATTCTCTTGCTCAAGAAGATGCATTTATGTCACGGGATGTCCATCT 2342
|||||| ||||| ||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 2238 TAGACTAGAAGGCCATTCTCTTGCACAAGAAGATGCATTTATGTCCCGGGATGTCCATCT 2297
Query 2343 CCTTCAGATTTGTACCGGGATTGACGAGAATGCCGTTGGAGCTTGTTCTGAACTGATATT 2402
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2298 CCTTCAGATTTGTACCGGGATTGACGAGAATGCCGTTGGAGCTTGTTCTGAACTGATATA 2357
Query 2403 TGCTCCGATTAATGAGATGTTCCCGGATGATGCTCCACTTGTTCCCTCTGGATTCCGAGT 2462
|||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||
Sbjct 2358 TGCTCCGATTAATGAGATGTTCCCAGATGATGCTCCACTTGTTCCTTCTGGATTTCGAGT 2417
Query 2463 CATACCCGTTGATGCTAAAACGGGAGATGTACAAGATCTGTTAACCGCTAATCACCGTAC 2522
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 2418 CATACCCGTTGATGCTAAAACGGGAGATGCACAAGATCTGTTAACCGCTAATCACCGAAC 2477
Query 2523 ACTAGACTTAACTTCTAGCCTTGAAGTCGGTCCATCACCTGAGAATGCTTCTGGAAACTC 2582
| ||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 2478 ATTAGACTTAACTTCCAGCCTCGAAGTCGGTCCATCACCAGAGAATGCTTCTGGAAACTC 2537
Query 2583 -T-TT-TTCTAGCTCAAGCTCGAGATGTATTCTCACTATCGCGTTTCAATTCCCTTTTGA 2639
| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2538 CTCTTCTTCTAGCTCAAGCTCGAGATGTATCCTCACTATCGCGTTTCAATTCCCTTTTGA 2597
Query 2640 AAACAACTTGCAAGAAAATGTTGCTGGTATGGCTTGTCAGTATGTGAGGAGCGTGATCTC 2699
||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||
Sbjct 2598 GAACAACTTGCAAGAAAATGTTGCTGGTATGGCTTGTCAGTATGTGAGAAGCGTAATTTC 2657
Query 2700 ATCAGTTCAACGTGTTGCAATGGCGATCTCACCGTCTGGGATAAGCCCGAGTCTGGGCTC 2759
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 2658 ATCAGTTCAACGTGTTGCAATGGCAATCTCACCGTCTGGGATAAGCCCGAGCCTGGGCTC 2717
Query 2760 CAAATTGTCCCCAGGATCTCCTGAAGCTGTTACTCTTGCTCAGTGGATCTCTCAAAGTTA 2819
||||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2718 CAAATTGTCGCCGGGATCTCCTGAAGCTGTTACTCTTGCCCAGTGGATCTCTCAAAGTTA 2777
Query 2820 CAGTCATCACTTAGGCTCGGAGTTGCTGACGATTGATTCACTTGGAAGCGACGACTCGGT 2879
|||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 2778 CAGTCACCACTTAGGCTCGGAGTTGCTGACGATTGACTCACTTGGAAGCAACGACTCGGT 2837
Query 2880 ACTAAAACTTCTATGGGATCACCAAGATGCCATCCTGTGTTGCTCATTAAAGCCACAGCC 2939
| ||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||
Sbjct 2838 ATTAAAACTTCTATGGGATCACCAAGACGCCATCTTGTGTTGCTCGTTAAAGCCACAGCC 2897
Query 2940 AGTGTTCATGTTTGCGAACCAAGCTGGTCTAGACATGCTAGAGACAACACTTGTAGCCTT 2999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2898 AGTGTTCATGTTTGCGAACCAAGCTGGTCTAGACATGCTAGAGACAACACTTGTAGCCTT 2957
Query 3000 ACAAGATATAACACTCGAAAAGATATTCGATGAATCGGGTCGTAAGGCTATCTGTTCGGA 3059
|||||| ||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||
Sbjct 2958 ACAAGACATAACACTCGAAAAGATATTCGATGAATCTGGTCGAAAGGCTCTCTGTTCCGA 3017
Query 3060 CTTCGCCAAGCTAATGCAACAGGGATTTGCTTGCTTGCCTTCAGGAATCTGTGTGTCAAC 3119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 3018 CTTCGCCAAGCTAATGCAACAGGGATTTGCTTGCTTGCCTTCAGGAATCTGTGTGTCGAC 3077
Query 3120 GATGGGAAGACATGTGAGTTATGAACAAGCTGTTGCTTGGAAAGTGTTTGCTGCATCTGA 3179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3078 GATGGGAAGACATGTGAGTTATGAACAAGCTGTTGCTTGGAAAGTGTTTGCTGCATCTGA 3137
Query 3180 AGAAAACAACAACAATCTGCATTGTCTTGCCTTCTCCTTTGTAAACTGGTCTTTTGTGTG 3239
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3138 AGACAACAACAACAATTTGCATTGTCTTGCCTTCTCCTTTGTAAACTGGTCTTTTGTGTG 3197
Query 3240 ATTCGATTGACAGAA 3254
|||| ||||||||||
Sbjct 3198 ATTCAATTGACAGAA 3212
> Ahg314555 jgi|Araly1|314555|fgenesh1_pm.C_scaffold_1003335
Length=2514
Score = 178 bits (96), Expect = 3e-43
Identities = 227/290 (78%), Gaps = 10/290 (3%)
Strand=Plus/Plus
Query 784 AAGTACGTTAGGTACACAGCTGAGCAAGTCGAGGCTCTTGAGCGTGTCTACGC-TGAGTG 842
||||| || ||||| ||| |||| ||||| || || |||||| | || || | ||| ||
Sbjct 49 AAGTATGTGAGGTATACACCTGAACAAGTTGAAGCACTTGAGAGGGTTTA-TCATGAATG 107
Query 843 TCCTAAGCCTAGCTCTCTCCGTCGACAACAATTGATCCGTGAATGTTCC-ATTTTGGCCA 901
|||||| || || ||| | || || || || |||||| | || || ||| ||| | | |
Sbjct 108 TCCTAAACCGAGTTCTATTCGCCGTCAGCAGTTGATCAGAGAGTG-TCCTATTCTCTCTA 166
Query 902 ATATTGAGCCTAAGCAGATCAAAGTCTGGTTTCAGAACCGCAGGTGTC-GAGATAAGCAG 960
| ||||||||||| ||||||||||| |||||||||||||| || || | |||| || ||
Sbjct 167 ACATTGAGCCTAAACAGATCAAAGTGTGGTTTCAGAACCGAAGATG-CAGAGAGAAACAA 225
Query 961 AGGAAAGAGGCGTCGA-GGCTCCAGAGC-GTAAACCGGAAGCTCTCTGCGATGAATAAAC 1018
||||||||||| || | |||| || ||| || || ||||| | | || ||||| ||||
Sbjct 226 AGGAAAGAGGCTTC-ACGGCTTCA-AGCTGTGAATAGGAAGTTGACGGCAATGAACAAAC 283
Query 1019 TGTTGATGGAGGAGAATGATAGGTTGCAGAAGCAGGTTTCTCAGCTTGTC 1068
| |||||||||||||||||||||||||||||||| || || ||||| |||
Sbjct 284 TCTTGATGGAGGAGAATGATAGGTTGCAGAAGCAAGTGTCACAGCTGGTC 333
> Ahg491408 jgi|Araly1|491408|fgenesh2_kg.7__841__AT4G32880.1
Length=3015
Score = 122 bits (66), Expect = 1e-26
Identities = 185/243 (76%), Gaps = 6/243 (2%)
Strand=Plus/Plus
Query 1170 TAGTCCTGCTGGATTGCTCTCAATCGCAGAGGAGACTTTGGCAGAGTTCCTATCCAAGGC 1229
||| ||||||||||| | || || || || || ||||| |||||||| | || |||||
Sbjct 837 TAGCCCTGCTGGATTATTGTCCATTGCGGATGAAACTTTAACAGAGTTCATTTCTAAGGC 896
Query 1230 TACAGGAACTGCTGTTGATTGGGTTCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGT 1289
|| ||||| ||||| || ||||| || ||||||||||||||||||||||||||||| |
Sbjct 897 CACTGGAACCGCTGTCGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCAT 956
Query 1290 TGGCATCTTTGCCATTTCGCAAAGATGCAATGGAGTGGCAGCTCGAGCCTGTGGTCTTGT 1349
|| ||| |||| ||||| || |||||| ||| | ||||| || || || || |||||
Sbjct 957 AGGAATCGTTGCTATTTCTCACGGATGCACGGGAATCGCAGCCCGTGCTTGCGGCCTTGT 1016
Query 1350 TAG-CTTAGAACCTATGAAGATT-GCAGAGATCCTCAAAG-ATCGGCCATCTTGGTTCCG 1406
| ||| || || | ||| | || |||||||| |||| || ||| | |||||| ||
Sbjct 1017 GGGTCTT-GATCCCAC-AAGGGTCGCGGAGATCCT-AAAGGATAAGCCTTGTTGGTTGCG 1073
Query 1407 TGA 1409
|||
Sbjct 1074 TGA 1076
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 132250066175
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5