BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G60760.1 Length=2598 Score E Sequences producing significant alignments: (Bits) Value Ahg496224 jgi|Araly1|496224|fgenesh2_kg.8__2040__AT5G60760.1 3795 0.0 Ahg323187 jgi|Araly1|323187|fgenesh1_pm.C_scaffold_5000731 1155 0.0 > Ahg496224 jgi|Araly1|496224|fgenesh2_kg.8__2040__AT5G60760.1 Length=2603 Score = 3795 bits (2055), Expect = 0.0 Identities = 2451/2632 (93%), Gaps = 67/2632 (3%) Strand=Plus/Plus Query 1 ATAACAACAAGTGATACATTCTCAATCTCTGATTCTTCTGATTCTCAAAACCCTAATTT- 59 |||||||||||||||||||||||||||||||| |||| | ||||||||||||| Sbjct 1 ATAACAACAAGTGATACATTCTCAATCTCTGA---TTCT-A-----AAAACCCTAATTTC 51 Query 60 -CCACACGCTTTCTATCATTTCCACCCAAAAGAGAGAGATATGACGGAGACGACGAAGGT 118 |||||||| |||| | |||||||||| |||||||||||||||||||||||||||||||| Sbjct 52 CCCACACGC-TTCTTTAATTTCCACCCTAAAGAGAGAGATATGACGGAGACGACGAAGGT 110 Query 119 GATGTACATAGTGGTGGTCGATGGAACG--GATA---CGGCGGAGACGGTGGAAGAAGAC 173 |||||| |||||||||||||| || || |||| |||||| |||||||||||||||| Sbjct 111 GATGTATATAGTGGTGGTCGACGG--CGTTGATACGGCGGCGGCGACGGTGGAAGAAGAC 168 Query 174 GGGACCGGGACTTGGAAAGATTCGTTTAGGTATACACGTCCTGTTTTGCAGAGTACTCTT 233 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 169 GGGACCGGGAATTGGAAAGATTCGTTTAGGTATACGCGTCCTGTTTTGCAGAGTACTCTT 228 Query 234 CAGCTTATGGGATGCAAAGCCCGTCACGCCTTCAAGATTAGCCGCAGGGTGTTTGAGTTA 293 |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||| Sbjct 229 CAGCTTATGGGATGCAAAGCTCGTCATGCCTTCAAGATTAGCCGCAGGGTTTTTGAGTTA 288 Query 294 ATAAGAAGTGAGGGATCTTTAATCCTTTCTCCCTCGCTTTCGCCCTCGCATAGTAAAGAA 353 ||||||||||||||||| |||||||||||||| || ||||||||| |||||||| ||||| Sbjct 289 ATAAGAAGTGAGGGATCCTTAATCCTTTCTCCATCTCTTTCGCCCACGCATAGTGAAGAA 348 Query 354 TCTGAATTTCAGAAGACAGGTGATGCTTCAGCTTGTGCTAATGTAGAAAAGGCTAACAAA 413 |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 349 TCTGAATTTCAGAAGAGAGGTGATACTTCAGCTTGTGCTAATGTAGAAAAGGCTAACAAA 408 Query 414 GTTAACAGTTTGGCTACTGATGATGTTGATAAGAGTAAAAGTAAGCCGTTTGAGGTGTAC 473 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 409 GTTAACAGTTTGGCTACTGATGATGTTGATAAGAGTAAAAGTAAGCCGTTTGAAGTGTAC 468 Query 474 AAAAGGCGAACAACCGTTGTTGTTTCTCGTGAAATATTTGTAAACGTTGTCTGTGATGCC 533 |||||||||||||| ||||||||||| || || ||||| || ||||||||||||||||| Sbjct 469 AAAAGGCGAACAACGGTTGTTGTTTCGCGGGATATATTCGTTAACGTTGTCTGTGATGCA 528 Query 534 CTGGCTGAGTACAAGTATGTGGGTCATGACCAAAGGGCAGACTTGATTCTGTCGTGCAGA 593 ||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 529 TTGGCTGAATATAAGTATGTGGGTCATGACCAAAGGGCAGACTTGATTCTGGCGTGCAGA 588 Query 594 ATCCGAGAAAGGAAAGAATCTGTGACTGTTCTACTGTGCGGTACTAGTGGCTGTGGCAAA 653 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 589 ATCCGAGAAAGGAAAGAATCTGTGACTGTTCTGCTGTGCGGTACTAGTGGCTGTGGCAAA 648 Query 654 TCTACACTCTCCGCACTTCTGGGAAGTAGGCTTGGGATTACAACGGTGGTCTCAACCGAC 713 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 649 TCTACACTCTCCGCACTTTTGGGAAGTAGGCTTGGGATTACAACGGTGGTCTCAACCGAC 708 Query 714 TCAATCCGTCACATGATGAGGAGTTTCGTTGATGAAAAGCAGAATCCTTTGCTATGGGCT 773 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 709 TCAATCCGTCACATGATGAGGAGTTTCGTTGATGAAAAGCAGAATCCTTTGCTATGGGCT 768 Query 774 TCAACATACCATGCTGGAGAGTACCTTGACCCTGTGGCAGTTGCTGAGTCAAAAGCCAGA 833 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 769 TCAACATACCATGCTGGAGAGTACCTTGACCCCGTGGCAGTTGCTGAGTCAAAAGCCAAA 828 Query 834 AGAAGAAGAGCCaaaaaaaTGGATAGTATTGAGGACGAAAAAGCGAAAGCCTCTGAAGGT 893 |||||||||||||||| | |||||||||||||| ||||||||||||| |||||||||||| Sbjct 829 AGAAGAAGAGCCAAAAGATTGGATAGTATTGAGAACGAAAAAGCGAAGGCCTCTGAAGGT 888 Query 894 GGGAAGGCTAAGAATACTCAACAGACTGATGTTGGATCAACAA-AAAACACCCCTGTATT 952 | ||||||||| |||||||||||||||||||||||||||| || || |||||||||||| Sbjct 889 GTGAAGGCTAATAATACTCAACAGACTGATGTTGGATCAA-AATCAACCACCCCTGTATT 947 Query 953 GTTAAGTCCCAAGCAAATGGCTGTAGAAGGATTTAAGGCTCAAAGTGAAATGGTTATTGA 1012 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 948 GTTAAGTCCCAAGCAAATGGCTGTAGAAGGATTTAAGGCTCAAAGTGAAATGGTTATTGA 1007 Query 1013 CAATCTCGATAGGCTCATTACCGCATGGGAAGAAAGGAAAGAGTCTGTTATTGTTGAAGG 1072 ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct 1008 CAATCTCGATAGGCTCATTACCGCATGGGAAGAAAAGAAAGAGTCTGTTGTTGTTGAAGG 1067 Query 1073 TGTCCATTTAAGCCTCAACTTTGTGATGGGACTGATGAAAAAGCATCCTTCTATAGTTCC 1132 |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 1068 TGTCCACTTAAGCCTCAACTTTGTGATGGGACTAATGAAAAAGCATCCTTCGATAGTTCC 1127 Query 1133 TTTCATGGTATACATCGCAAACGAGGAGAAACATTTGGAACGATTTGCAGTTAGAGCTAA 1192 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1128 TTTCATGGTATACATCGCAAACGAGGAGAAACATTTGGAACGATTTGCAGTTAGAGCTAA 1187 Query 1193 GTACATGACCCTGGACCCAGAGAAAAACAAGTATGTAAAATATATACGTAACATCAGAAC 1252 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1188 GTACATGACCCTGGACCCAGAGAAAAACAAGTATGTAAAATATATACGTAACATCAGAAC 1247 Query 1253 AATACAGGATTA-CTTGTGTAAACGAGCTGACAAACATCTCGTCCCCAAGATAAACAATA 1311 |||||||||||| ||| |||||||||||||||||||| || || |||||||||||||||| Sbjct 1248 AATACAGGATTACCTT-TGTAAACGAGCTGACAAACACCTAGTTCCCAAGATAAACAATA 1306 Query 1312 CCAATGTCGACAAGAGTGTGGCTGCGATCCACGCTACAGTCTTCAGTTGCCTGCGTAGGC 1371 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1307 CCAATGTCGACAAGAGTGTGGCTGCGATCCACGCGACAGTCTTCAGTTGCCTGCGTAGGC 1366 Query 1372 GAGAAGCAGGAGAGCATCTCTATGATGCTACTACAAATACTGTCTCAGTGATTGACGATG 1431 |||||||||||||||| |||||||||||||| || ||||||||||||||||| || |||| Sbjct 1367 GAGAAGCAGGAGAGCAGCTCTATGATGCTACCACCAATACTGTCTCAGTGATCGATGATG 1426 Query 1432 AGTATAGAAACCAGTGTACAGCTAATTCATTGAGCTCCAAAGGAATGTTTCAGCTGATCC 1491 |||| |||||||||||||| || ||||| ||||| ||||||||||||||||||||||||| Sbjct 1427 AGTACAGAAACCAGTGTACTGCCAATTCGTTGAGTTCCAAAGGAATGTTTCAGCTGATCC 1486 Query 1492 AAAGAAAAGGTTCTTCTAGGCATCTTATGGCTCTTCTCAATACTGATGGCACTTTCGCAA 1551 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct 1487 AAAGAAAAGGTTCTTCTCGGCATCTAATGGCTCTTCTCAATACTGATGGCACTTTCGCAA 1546 Query 1552 GAACTTGGCCCGTTACTGGTAAGGTCGATGAGAGTGGAAAGCCAGTCTTTTGTAATGAGA 1611 |||||||||| |||| ||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 1547 GAACTTGGCCTGTTAGTGGTAAGGTTGATGAGAGCGGAAAGCCAGTCTTTTGTAATGAGA 1606 Query 1612 TGATTGAAGAAAATGGAATGGAGCACCCGGTCTATGGATACCTACAGAAAGCTGAACCGG 1671 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 1607 TGATGGAAGAAAATGGAATGGAGCACCCGGTCTATGGATACCTACAGAAAGCCGAACCAG 1666 Query 1672 TGAATCTTCAGTTTGGTCTATTTGGGATCAGTGCTTGGCCTAGTGATGGAGCCACTAGCC 1731 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1667 TAAATCTTCAGTTTGGTCTATTTGGGATCAGTGCTTGGCCTAGTGATGGAGCCACGAGCC 1726 Query 1732 GCGCTGGGAGTGTAGATGACTGTAAAGCTGACATGGCTGAAACCAGCAGTCGGTATTACT 1791 |||| |||||||||||||||| || ||||||| ||||||||||||||||||||||||||| Sbjct 1727 GCGCCGGGAGTGTAGATGACTCTAGAGCTGACGTGGCTGAAACCAGCAGTCGGTATTACT 1786 Query 1792 CTTCTTGCTGCAGCTCGCCTAGGATGTCTGAAGGAACTTCTAAAGAGCTTAAGGAGGATC 1851 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1787 CTTCTTGCTGCAGCTCGCCTAGGATGTCTGAAGGAACTTCTAAAGAGCTTAAGGAGGATC 1846 Query 1852 AGTCAGTCCATGGGAGCGATGAAGAAGTCGAGGATGATCCTCCCGAGCCAGATACAGATT 1911 |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1847 AGTCGGTGCATGGGAGCGATGAAGAAGTCGAGGATGATCCTCCCGAGCCAGATACAGATT 1906 Query 1912 TTAGCGATGACGATAACAAGCGAGACCATGACGAGGTGGGTTCGGTTGATGAGCAATCAA 1971 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1907 TTAGCGATGACGATAACAAGCGAGACCATGACGAGGTGGGTTCGGTTGATGAGCAATCAA 1966 Query 1972 CAAAGTCAGATGAGGAGTACGATGATCTTGCTATGGAAGACAAAAGCTACTGGACAGATG 2031 ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||| Sbjct 1967 CAAAGTCAGATGAGGAGTACGATGATCTTGCAATGGAAGACAAAAACTACTGGACGGATG 2026 Query 2032 AAGAGGAAGAGTCACGAGATACGATTGCAATAATGTCTGaaaaaaa-CAACAAGCAAGCA 2090 | |||||||||||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 2027 ACGAGGAAGAGTCACGAGATACGATTGCAATAATGTCTGAAAAAAAACA-CAAGCAAGCA 2085 Query 2091 ACAAAAGAAGACAAGTACATACAGAACTTAGACCTTTTTCTACGGACCGCAAACCAGCAG 2150 ||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||| Sbjct 2086 ACAAAAGAAGACAAGTACATACAAAACTTAGACCTTTTTCTGCGGACCGCGAACCAGCAG 2145 Query 2151 CTTGTCGAGCCACTTCAGCTATGTGCATCACTGCTCACATGCGAGAATGGGAACACAAGA 2210 ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 2146 CTTGTCGAGCCGCTTCAGCTATGCGCATCACTGCTCACATGCGAGAACGGGAACACAAGA 2205 Query 2211 CTCTGGTTGGGTAAAGAAAAGATGAGGAAACGTTCTTTAAGCATCTCGGCCATTGGCAAA 2270 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| Sbjct 2206 CTCTGGTTGGGTAAAGAAAAGATGAGGAAACGTTCTCTAAGCATCTCGGCCATTGGAAAA 2265 Query 2271 CATGGGTCGGGTTTGGGTGATGCGATTCTCTTGGGTGCCCCATGAGGCCAT-GATCTT-- 2327 ||||||||||||||||||||||||||||||||||||||||||||| | | | | || Sbjct 2266 CATGGGTCGGGTTTGGGTGATGCGATTCTCTTGGGTGCCCCATGAT-CTTTTGCT-TTAA 2323 Query 2328 TTACTTTAGTTTGATATTTCTCTGGTGTAGTCttttttttATT------TCTTGATAAAG 2381 || ||| ||||||||||||||||||| |||||| |||||| || ||||||||||| Sbjct 2324 TTCCTT-AGTTTGATATTTCTCTGGTTTAGTCTCTTTTTT-TTCCCCCCTCTTGATAAAG 2381 Query 2382 TATTCTGGTTCTGGTCTTTAGTTTAAGTTTTCtgtgtgtgtatgtgtgactgtgtgAATA 2441 ||||||||| | |||||||||||||||||| ||||||| ||||| |||||||| ||| Sbjct 2382 CATTCTGGTTTTAGTCTTTAGTTTAAGTTTTATGTGTGT--ATGTG--ACTGTGTGTATA 2437 Query 2442 GTCTTAACT-----T-GCACAAATTTGGGGGTTTATAAAGTGCTTCGttttctttt-ctt 2494 ||||||||| | |||||||||||||||| |||||||||||| ||||| |||| ||| Sbjct 2438 GTCTTAACTCGAACTTGCACAAATTTGGGGGTCTATAAAGTGCTT-GTTTTTTTTTTCTT 2496 Query 2495 ttt-tgatttaaggctt--ttcttttcttcGA-CCTCAAATGTAAATACT-T-C---AAT 2545 ||| | ||||| | || || | ||| || || |||||||||||||| | | ||| Sbjct 2497 TTTCTT-TTTAATGATTCATTATAA-CTT-GATCC-CAAATGTAAATACTGTACTTCAAT 2552 Query 2546 ATTAACATCTAA-GACTCCAGTTTA-AA-TTTCTATATAATTGAGCGTTTGC 2594 ||||||| | | |||||||||||| || |||||| ||||||||||||||| Sbjct 2553 CTTAACAT-TGACGACTCCAGTTTATAAATTTCTACGTAATTGAGCGTTTGC 2603 > Ahg323187 jgi|Araly1|323187|fgenesh1_pm.C_scaffold_5000731 Length=2157 Score = 1155 bits (625), Expect = 0.0 Identities = 1510/1914 (79%), Gaps = 154/1914 (8%) Strand=Plus/Plus Query 186 TGGA-AAGATTCGTTTAGGTATACACGTCCTGTTTTGCAGAGTACTCTTCAGCTTATGGG 244 |||| | ||||||||| | || || ||||||||||||||||||||||||||||||||||| Sbjct 72 TGGAGATGATTCGTTTCGTTACACGCGTCCTGTTTTGCAGAGTACTCTTCAGCTTATGGG 131 Query 245 ATGCAAAGCCCGTCACGCCTTCAAGATTAGCCGCAGGGTGTTTGAGTTAATAAGAAGTGA 304 |||||||| ||||||||||||||||| |||| ||||| ||||||||||||||||| || Sbjct 132 TTGCAAAGCTCGTCACGCCTTCAAGATCAGCCAAAGGGTTTTTGAGTTAATAAGAAGCGA 191 Query 305 GGGATCTTTAATCCTTTCTCCCTCGCTTTCGCCCTCGCATAGTAAAGAATCTGAATTTCA 364 ||| || | || | | || || || | || | || ||| |||||||| | Sbjct 192 GGG-------AT-C-TTGT-AATAGC--TCACCAGAGAATGGGAAGGAAACTGAATTT-A 238 Query 365 -GAA-GACAGGTGATGCTTCAGCTTGTGCTAATGTAGAAAAGGC-TAACAAAGTTAACAG 421 || || || || || |||| |||||| | | | || ||| | |||| ||| | Sbjct 239 CTAAGGA-AGTTGGTGGTTCAACTTGTG-T-A-G-AG-AAA--CTTAAC--TGTT---TG 285 Query 422 TTTGGCT-ACTGA---TGATGTTGATAAGAGTAAAAGTAAGCCGTTTGAGGTGTACAAAA 477 || ||| | ||| ||||||||| |||| ||||||||| ||||||||| ||||||||| Sbjct 286 GTT-GCTGA-TGATGTTGATGTTGACAAGAATAAAAGTAAACCGTTTGAGATGTACAAAA 343 Query 478 GGCGAACAACCGTTGTTGTTTCTCGTGAAATATT-TGTAAACGTTGTCTGTGATGCCCTG 536 |||| ||||| ||||||||||| || |||||||| | | | ||||| |||||||||||| Sbjct 344 GGCGGACAACTGTTGTTGTTTCACGGGAAATATTCT-TGGATGTTGTGTGTGATGCCCTG 402 Query 537 GCTGAGTACAAGTATGTGGGTCATGACCAAAGGGCAGACTTGATTCTGTCGTGCAGAATC 596 |||||||| ||||| || |||| |||||||||||||| ||||||||| | ||||||||| Sbjct 403 GCTGAGTATAAGTACGTTGGTCGCGACCAAAGGGCAGATTTGATTCTGGCATGCAGAATC 462 Query 597 CGAGAAAGGAAAGAATCTGTGACTGTTCTACTGTGCGGTACTAGTGGCTGTGGCAAATCT 656 |||||||||||||||||||| |||||| | || || || || ||||||||||| |||||| Sbjct 463 CGAGAAAGGAAAGAATCTGTAACTGTTTTGCTCTGTGGCACCAGTGGCTGTGGTAAATCT 522 Query 657 ACACTCTCCGCACTT-CTGGG-AAGTAGGCTTGGGATTACAACGGTGGTCTCAACCGACT 714 ||| | || ||| || ||||| || ||||| |||||||| || ||||| ||||| |||| Sbjct 523 ACATTGTCTGCA-TTGCTGGGTAA-CAGGCTGGGGATTACGACTGTGGTATCAACTGACT 580 Query 715 CAATCCGTCACATGATGAGGAG-TTTCGTTGATGAAAAGCAGAATCCTTTGCTATGGGCT 773 |||| | |||||||||||||| ||| | |||||| ||||||||||||||||| |||||| Sbjct 581 CAATAAGGCACATGATGAGGAGCTTT-GCTGATGAGAAGCAGAATCCTTTGCTGTGGGCT 639 Query 774 TCAACATACCATGCTGGAGAGTACCTTGACCCTGTGGCAGTTGCTGAGTCAAAAGCCAGA 833 ||||||||||||||| | ||| | | | ||| || | || || | || || | | Sbjct 640 TCAACATACCATGCT-G-GAG-A--GT-A-CCT-TGAC-CCTG-TG-G-CAGTAG-CTG- 685 Query 834 AGAAGAAGAGCCaaaaaaaTGGATAGTATTGAGGACGAAAAAG-CGAAAGCCTCT-GAAG 891 || || |||| |||| || | | | | | |||||| ||||| |||| | || Sbjct 686 AG-TCAAAAGCC---AAAA--GA-A--A---A-G-CCAAAAAGTTGAAAGGCTCTCG-AG 730 Query 892 GTGGGAAGGCTAAGAATACTCAACAGACTGATGTTGGATC-AACAAAAAACACCCCTGTA 950 || | || | ||||| ||| |||| |||| |||||| ||| |||| ||| | Sbjct 731 GT-GTAA--ATTCCAATACCCAAAAGACGGATGCTGGATCAAAC-TCTGGCACCACTG-A 785 Query 951 -TTGTTAAGTCCCAAGCAAATGGCTGTAGAAGGATTTAAGGCTCAAAGTGAAATGGTTAT 1009 | ||||||| ||||| |||||| ||||||| | |||||| |||||||| ||||| || Sbjct 786 GCTATTAAGTCATAAGCAGATGGCTATAGAAGGCTATAAGGCACAAAGTGAGATGGTGAT 845 Query 1010 TGACAATCTCGATAGGCTCATTACCGCATGGGAAGAAAGGAAAGAGTCTGTTA-TTGTTG 1068 ||||| |||||||||||||||||| | |||||||| ||||||||||| | || | |||| Sbjct 846 TGACAGTCTCGATAGGCTCATTACAACTTGGGAAGAGAGGAAAGAGTC-GGTAGTCGTTG 904 Query 1069 AAGGTGTCCATTTAAGCCTCAACTTTGTGATGGGACTGATGAAAAAGCATCCTTCTATAG 1128 |||| || || |||||||| ||||||||||||||||||||||||||||| ||||| || | Sbjct 905 AAGGGGTTCACTTAAGCCTTAACTTTGTGATGGGACTGATGAAAAAGCACCCTTCGATTG 964 Query 1129 TTCCTTTCATGGTATACATCGCAAACGAGGAGAAACATTTGGAACGATTTGCAGTTA-GA 1187 |||| |||||||||||||| || |||||||||||||| |||||||| ||||||| || || Sbjct 965 TTCCCTTCATGGTATACATAGCCAACGAGGAGAAACAATTGGAACGGTTTGCAG-TACGA 1023 Query 1188 GCTAAGTACATGACCCTGGACCCAGAGAAA-AACAAGTATGTAAAATATATACGTAACAT 1246 || ||||||||||| ||||||||| ||| || |||||||||||||||||||||||||| Sbjct 1024 GCCAAGTACATGACATTGGACCCAG-CAAAGAATAAGTATGTAAAATATATACGTAACAT 1082 Query 1247 CAGAACAATACAGGATTA-CTTGTGTAAACGAGCTGACAAACATCTCGTCCCCAAGATAA 1305 |||||||||||||||||| || ||||||||||||||||| |||||||| || ||||||| Sbjct 1083 CAGAACAATACAGGATTATCTA-TGTAAACGAGCTGACAAGCATCTCGTTCCTAAGATAA 1141 Query 1306 ACAATACCAATGTCGACAAGAGTGTGGCTGCGATCCACGCTACAGTCTTCAGTTGCCTGC 1365 |||| || |||||||||||||| |||||| | |||||||| || ||||| ||||||||| Sbjct 1142 ACAACACAAATGTCGACAAGAGCGTGGCTACAATCCACGCGACGGTCTTTGGTTGCCTGC 1201 Query 1366 GTAGGCGAGAAGCAGGAGAGCATCTCTATGATGCTACTACAAATACTGTCT-CAGTGATT 1424 |||| || ||| |||||||| | ||||||||| | || |||||||| || | | || || Sbjct 1202 GTAGACGTGAAACAGGAGAGAAGCTCTATGATACAACCACAAATACCGT-TGCTGTTATC 1260 Query 1425 GACGATGAGTATAGAAACCAGTGTACAGCTAATTCATTGAGCTCCAAAGGAATGTTTCAG 1484 ||||||||| | || ||||| |||||||| |||||||| || ||||| |||||||||||| Sbjct 1261 GACGATGAGCACAGGAACCAATGTACAGCCAATTCATTAAGTTCCAAGGGAATGTTTCAG 1320 Query 1485 CTGATCCAAAGAAAAGGTTCTTCTAGGCATCT-TATGGCTCTTCT-CAATACTGATGGCA 1542 |||||||||||| |||| || ||||||| | | |||||||||| | |||||||||||| | Sbjct 1321 CTGATCCAAAGACAAGGCTCCTCTAGGCGT-TATATGGCTCTT-TGCAATACTGATGGTA 1378 Query 1543 CTTTCGCAAGAACTTGGCCCGTTACTGGTAAGGTCGATGAGAGT--GGAAAGCCAGTCTT 1600 || | || ||||||||||| ||| ||| || ||| ||| | |||| ||| ||| | Sbjct 1379 CTGTGGCCAGAACTTGGCCTGTT---GGTTCCGTTGATAAGA-TCAGGAA-GCCCGTCGT 1433 Query 1601 TTG-TAATGAGATGATTGAAGAAAATGGAATGGAGCACCCGGTCTATGGATACCTACAGA 1659 | | || ||||||| | | || ||||| ||||| || | | | |||| | Sbjct 1434 T-GATACTGAGATG---G--GTAA-TGGAACAGAGCA-----TC-A-G----C-TACATA 1474 Query 1660 AAGCTGAACCGGTGAATCTTCAGTTTGGTCTA-TTTGGGATCAGTGCTTGGCCTAGTGAT 1718 |||||||||| |||||||||||||| |||| | ||||||||||| ||||||||||||||| Sbjct 1475 AAGCTGAACCTGTGAATCTTCAGTTCGGTC-ACTTTGGGATCAGCGCTTGGCCTAGTGAT 1533 Query 1719 GGAGCCACTAGCCGCGCTGGGAGTGTAGATGACTGTAA-AGCTGACA-TGGCTGAAACCA 1776 || || ||||||| || |||||||| ||||| | || ||| || | | |||||| Sbjct 1534 GGCGCAACTAGCCATGCCGGGAGTGTGGATGAATC-AAGAGCAGATAATAT-TGAAACTG 1591 Query 1777 GCAGTC-GGTATTACTCTTCTTGCTGCAGCTCGCCTA-GGATGTCTGAAGGAACTTCTAA 1834 | || | || ||||||||||||||||||| ||||| | ||| ||||| || |||| || Sbjct 1592 GAAG-CAGGCATTACTCTTCTTGCTGCAGTTCGCC-ACGGACATCTGATGGGCCTTCAAA 1649 Query 1835 AGAGCTTAAGGAGGATCAGTCAGTCCATGGGAGCGATGAAGA--A-GT---CGAGGATGA 1888 |||||| | |||||| ||||| || |||||||||||||||| | | ||| ||||| Sbjct 1650 AGAGCTGATGGAGGAGCAGTCTGTAGATGGGAGCGATGAAGATGAAGAAGGCGATGATGA 1709 Query 1889 TCCTCCCGAGCCAGATACAGATTTTAG--CG-ATGACGATAACAA-GC-GA--G-A-CCA 1939 | ||| ||||||||| | ||| || | | || |||||||| | || | | || Sbjct 1710 TTTTCCTGAGCCAGATTCTGATGA-AGATCTCA-GA-GATAACAATGATGAACGCAACCG 1766 Query 1940 TGACGAGGTGGGTTCGGTTGATGAGCAATCAACAAAGTCAGATGAGGAGTACGATGATCT 1999 ||||||||| || ||||| |||||| |||| |||||||||||||| |||||||||||||| Sbjct 1767 TGACGAGGTTGGATCGGTGGATGAGGAATCGACAAAGTCAGATGAAGAGTACGATGATCT 1826 Query 2000 TGCTATGGAAGACAAAAGCTACTGGACAGAT---GAAGAGGAAGAGTCACGAGA 2050 || ||||||||||| || ||||||||||| ||||| |||||||| ||||| Sbjct 1827 GGCAATGGAAGACAAGAGTTACTGGACAGACAACGAAGAAGAAGAGTCTCGAGA 1880 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 97968110140 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5