BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G61000.1
Length=2076
Score E
Sequences producing significant alignments: (Bits) Value
Ahg496254 jgi|Araly1|496254|fgenesh2_kg.8__2070__AT5G61000.1 2922 0.0
Ahg325405 jgi|Araly1|325405|fgenesh1_pm.C_scaffold_6000625 1504 0.0
Ahg940266 jgi|Araly1|940266|scaffold_600810.1 202 9e-51
> Ahg496254 jgi|Araly1|496254|fgenesh2_kg.8__2070__AT5G61000.1
Length=2006
Score = 2922 bits (1582), Expect = 0.0
Identities = 1878/2019 (93%), Gaps = 28/2019 (1%)
Strand=Plus/Plus
Query 69 ATCTAGAGAGAAAGATGCAGACTTCGGTGACCCCAGATGCCATCTCCACCGTTTTGTCAA 128
||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 1 ATCGAGAGAGAAAGATGCAGACTTCGGTGACCCCAGATGCTATCTCCACCGTATTGTCAA 60
Query 129 ACCCATCCTTTGATTCGTCTTCCGATCGATCTGAGATCGTTGTTCAAGTTGTGGATCTTA 188
|||||||||||||||| || ||||| ||| || | |||||||||||||||||||||||||
Sbjct 61 ACCCATCCTTTGATTCCTCCTCCGAACGACCTCAAATCGTTGTTCAAGTTGTGGATCTTA 120
Query 189 AACCTATCGGCAATCGCTATACATTTAGTGCAAATGACGGAAAGACGAAAGTCAAAGCAA 248
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 121 AACCTATCGGCAATCGATATACATTTAGTGCTAATGACGGAAAGACGAAAGTCAAAGCAA 180
Query 249 TGTTTACTGCTTCACTCACACCTGAAATCATTTCTGGGAAGATCCAGAACT-TGGGTCTA 307
||||||| || |||||||||||||||| |||||||| ||||||||||| | |||| |||
Sbjct 181 TGTTTACACCTACACTCACACCTGAAATTATTTCTGGAAAGATCCAGAA-TCTGGGCCTA 239
Query 308 ATTCGTCTCATTGATTTCACTGTTAACGACATTTCAAGCAAATCTACAAAATATTTCCTT 367
||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||
Sbjct 240 GTTCGTCTCATTGATTTCACAGTTAACGACATATCAAGCAAATCAACAAAATATTTCCTT 299
Query 368 GTGACTAAATGTGAGGCTGTTGGTTCTGTGCTTGATTCTGAGATTAACTTGGACAGTAAG 427
|||| ||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 300 GTGAATAAGTGTGAGGCTGTTGGTTCTGTGCTTGATTCTGAGATCAACTTGGAGAGTAAG 359
Query 428 AGCGGAGAGGAGGAGGCTCGTGAGCCCAAGAAGCAGAAACTAGAGCATTCTCCTGTCAGT 487
||| | ||||||||| |||| |||||||| ||||| ||||||||||||||| |||||
Sbjct 360 AGC---CATGAGGAGGCTAGTGATCCCAAGAAACAGAAGCTAGAGCATTCTCCTCTCAGT 416
Query 488 CCTCTGAATGATG-T--------TGTTTCTACTGGTATCACATTGAAACCGAAGCAGGAA 538
||| ||||||||| | ||||||||||||||||||||||||||| |||||||||
Sbjct 417 CCTGTGAATGATGTTAAAACGGATGTTTCTACTGGTATCACATTGAAACCCAAGCAGGAA 476
Query 539 TTTGTAGCCAAATCAGCTTCTCAGATAATGAGTGAACAAAGGGGAAATGCTGCACCAGCT 598
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 477 TTTGTAGCCAAATCAGCCTCTCAGATAATGAGTGAACAGAGGGGAAATGCTGCACCAGCT 536
Query 599 GCAAGAATGGCCATGACTAGAAGGGTTCATCCACTTGTGTCATTAAATCCATATCAAGGA 658
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 537 GCAAGAATGGCCATGACTAGAAGGGTTCATCCACTTGTGTCATTAAACCCCTATCAAGGA 596
Query 659 AACTGGACCATCAAAGTCCGAGTTACAAACAAGGGAGTGATGAGAAATTACAAAAACGCT 718
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 597 AATTGGACCATCAAAGTCCGAGTTACAAACAAGGGAGTCATGAGAAATTACAAAAACGCT 656
Query 719 AG-GGGTGAAGGATGTGTCTTCAATGTTGAACTAACAGATGAAGAAGGAACACAAATTCA 777
|| ||| |||||||||||||||||||| ||||| || || ||||||||||||||||||||
Sbjct 657 AGAGGG-GAAGGATGTGTCTTCAATGTGGAACTTACTGACGAAGAAGGAACACAAATTCA 715
Query 778 AGCAACGATGTTTAATGATGCTGCAAGGAAGTTTTTTGACAGATTCCAGTTGGGAAAGGT 837
|||||| |||||||||||||||||||||||||||| || |||||||| |||||||||||
Sbjct 716 AGCAACAATGTTTAATGATGCTGCAAGGAAGTTTTACGAGAGATTCCAATTGGGAAAGGT 775
Query 838 TTATTATATATCAAGGGGGTCACTAAAACTCGCTAACAAGCAGTTCAAAACAGTTCAGAA 897
||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||
Sbjct 776 CTATTATATATCAAGGGGGTCACTTAAACTTGCTAACAAGCAGTTCAAGACAGTTCAGAA 835
Query 898 TGATTATGAGATGACACTGAATGAAAATTCAGAGGTTGAGGAAGCTAGTAGCGAAGAAAT 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 TGATTATGAGATGACACTGAATGAAAATTCAGAGGTTGAGGAAGCTAGTAGCGAAGAAAT 895
Query 958 GTTCATCCCTGAGACAAAATTCAACTTCGTACCCATTGAAGAGTTGGGTCTGTATGTTAA 1017
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||
Sbjct 896 GTTCATCCCTGAGACAAAATTCAACTTTGTACCCATTGAAGAGTTGGGTTTGTATGTAAA 955
Query 1018 TCAGAAGGAACTTATTGATCTTATTGGAGTTGTTCAAAGTGTATCTCCTACCATGAGTAT 1077
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 956 TCAGAAGGAGCTTATTGATCTTATCGGAGTTGTTCAAAGTGTATCTCCTACCATGAGTAT 1015
Query 1078 TAGAAGGAGAACTGACAATGAGATGATTCCTAAGAGGGATATAACTTTGGCTGATGAGTC 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 TAGAAGGAGAACTGACAATGAGATGATTCCTAAGAGGGATATAACTTTGGCTGATGAGTC 1075
Query 1138 -AAGGAAAACTGTTGTGGTGTCCCTGTGGAATGATCTTGCAACTGGCATAGGTCAGGAGC 1196
||| |||||||| ||||||||||||||||| || |||||||||||||||||||| || |
Sbjct 1076 GAAG-AAAACTGTCGTGGTGTCCCTGTGGAACGACCTTGCAACTGGCATAGGTCAAGAAC 1134
Query 1197 TACTAGACATGGCTGATCAGTCACCTGTGATTGCAATCAAGTCTCTCAAAGTTGGAGATT 1256
| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||
Sbjct 1135 TGCTAGACATGGCTGATAAGTCACCTGTGGTCGCAATCAAGTCTCTCAAAGTTGGAGATT 1194
Query 1257 TTCAAGGTGTTTCGTTGTCTACCATCAGCAGAAGCAATGTGGTTATTAACCCGGAATCAC 1316
||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 1195 TTCAAGGTGTTTCATTGTCCACTATCAGCAGAAGCAATGTGGTTATAAACCCGGAATCAC 1254
Query 1317 CAGAAGCTAAAAAGTTGAAATCTTGGTTTGATTCTGAAGGCAAGGAAATATCCATGTCTT 1376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1255 CAGAAGCTAAAAAGTTGAAATCTTGGTTTGATTCTGAAGGCAAGGAAATATCCATGTCTT 1314
Query 1377 CTATTGGCTCAGGGATGAGCCCTTCTGCCAAAAATGGATCTCGGTCTTTGTATACTGACC 1436
| |||||||||||||||||||| ||| |||| ||||||||||||||| ||||||||||||
Sbjct 1315 CCATTGGCTCAGGGATGAGCCCATCTTCCAAGAATGGATCTCGGTCTATGTATACTGACC 1374
Query 1437 GAGTGCTTCTCTCTCACATCACAAGCAATCCATCTTTATTCGAAGAAAAGCCTGTATTTT 1496
|||| |||||||| |||||||||||||| ||||||||| |||||| |||||||||||||
Sbjct 1375 GAGTCCTTCTCTCACACATCACAAGCAACCCATCTTTAGGCGAAGAGAAGCCTGTATTTT 1434
Query 1497 TCAGCACTAGGGCTTACATAAGCTTCATCAAACCAGACCAAACAATGTGGTACCAAGCTT 1556
||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1435 TCAGCACCAGGGCTTACATAAGCTTCATCAAACCAGATCAGACAATGTGGTACCAAGCTT 1494
Query 1557 GTAAGACTTGTAACAAGAAAGTGACAGAAGCACTTGACTCTGGTTACTGGTGTGAAGGAT 1616
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1495 GTAAGACTTGTAACAAGAAAGTGACTGAAGCCCTTGACTCTGGTTACTGGTGTGAAGGAT 1554
Query 1617 GCCAGAGAAAGTATGAAGAATGCAGCTTAAGGTACATAATGGCGGTGAAAGTCACCGACT 1676
|||||| ||| ||||||||||||||| |||||||||||||||||||||||||||| || |
Sbjct 1555 GCCAGAAAAAATATGAAGAATGCAGCCTAAGGTACATAATGGCGGTGAAAGTCACTGATT 1614
Query 1677 CATCTGGAGAAACTTGGATTTCGTCATTCAACGATGAAGCAGAGAAGATTCTTGGATGTT 1736
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 1615 CATCTGGAGAAACATGGATTTCCTCATTCAATGATGAAGCAGAGAAGATTCTTGGATGTT 1674
Query 1737 CAGCTGATGAGCTCAACAAACTAAAATCAGAGGAAGGTGAAGTAAATGAATATCAGACAA 1796
|||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1675 CAGCTGATGATCTCAACAAACTAAGATCAGAGGAAGGTGAAGTAAATGAATATCAGACAA 1734
Query 1797 AACTGAAAGAGGCAACATGGTCATCTCATGTCTTCCGGGTTAGTGTCACACAGAATGAGT 1856
|||||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1735 AACTGAAAGAAGCAACGTGGTCATCTCATGTCTTCCGGGTTAGTGTCACTCAGAATGAGT 1794
Query 1857 ATAACGGTGAGAAGAGACAGAGGGTAACTGTAAAAGGAGTAGCTCCTCTTGATTTTGCTG 1916
|||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1795 ATAACGGTGAGAAGAGGCAAAGGGTAACTGTGAAAGGAGTAGCTCCTCTTGATTTTGCTG 1854
Query 1917 CTGAAACAAGATTGTTGCTTCAAGACATCTCCAACAAGAACAAAACATCTCAGTAGT-AG 1975
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||
Sbjct 1855 CTGAAACAAGATTGTTGCTCCAAGACATCTCCAACAAGAACAAAGCATCTCAGTAGTTAG 1914
Query 1976 CTTTTACTTCttttttt-ttC-TCTATTGGCCTAAAAAAGTCTCAAAACTTTTCCTTGTA 2033
|||| || ||||| ||| |||| |||||||||||||||| |||||||| | |||||
Sbjct 1915 -TTTT--TTGTTTTTCCATTCCTCTACTGGCCTAAAAAAGTCT-AAAACTTTGC-TTGTA 1969
Query 2034 TAATATAAGCCTTTCTGCAATTTATAAAATTAGGGTTTT 2072
| |||||||||||||||||| |||| |||||||||||
Sbjct 1970 -A-TATAAGCCTTTCTGCAATATATATTATTAGGGTTTT 2006
> Ahg325405 jgi|Araly1|325405|fgenesh1_pm.C_scaffold_6000625
Length=1815
Score = 1504 bits (814), Expect = 0.0
Identities = 1259/1476 (85%), Gaps = 21/1476 (1%)
Strand=Plus/Plus
Query 505 TTCTACTGGTATCACATTGAAACCGAAGCAGGAATTTGTAGCCAAATCAGCTTCTCAGAT 564
||| || || || || |||||||| ||||| || ||||| |||||||||||||| |||||
Sbjct 351 TTCCACAGGCATAACGTTGAAACCAAAGCAAGAGTTTGTTGCCAAATCAGCTTCACAGAT 410
Query 565 AATGAGTGAACAAAGGGGAAATGCTGCACCAGCTGCAAGAATGGCCATGACTAGAAGGGT 624
||| | ||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 411 AATCAATGAGCAAAGGGGAAATGCTGCACCAGCTGCAAGAATGGCTATGACCAGAAGGGT 470
Query 625 TCATCCACTTGTGTCATTAAATCCATATCAAGGAAACTGGACCATCAAAGTCCGAGTTAC 684
|||||| |||||||| || || || |||||||||| ||||| || ||||| || || ||
Sbjct 471 TCATCCTCTTGTGTCCTTGAACCCTTATCAAGGAAGTTGGACTATTAAAGTTCGTGTCAC 530
Query 685 AAACAAGGGAGTGATGAGAAATTACAAAAACGCTAGGGGTGAAGGATGTGTCTTCAATGT 744
|||||| ||||| ||||||| |||||||||||| || || ||||||||||| || |||||
Sbjct 531 AAACAAAGGAGTCATGAGAACTTACAAAAACGCCAGAGGAGAAGGATGTGTGTTTAATGT 590
Query 745 TGAACTAACAGATGAAGAAGGAACACAAATTCAAGCAACGATGTTTAATG-ATGCTGCAA 803
|||||||| ||||| ||||||||||| ||||| ||||| |||||||| | | |||||||
Sbjct 591 GGAACTAACTGATGAGGAAGGAACACAGATTCAGGCAACAATGTTTAACGCA-GCTGCAA 649
Query 804 GGAAGTTTTTTGACAGATTCCAGTTGGGAAAGGTTTATTATATATCAAGGGGGTCACTAA 863
||||||||| |||||||||| || ||||||||||||| |||||||| ||||| || || |
Sbjct 650 GGAAGTTTTATGACAGATTCGAGATGGGAAAGGTTTACTATATATCCAGGGGATCGCTTA 709
Query 864 AACTCGCTAACAAGCAGTTCAAAACAGTTCAGAATGATTATGAGATGACACTGAATGAAA 923
| || ||||| ||||||||||| ||||||||||| |||||||||||||| || || || |
Sbjct 710 AGCTTGCTAATAAGCAGTTCAAGACAGTTCAGAACGATTATGAGATGACTCTAAACGAGA 769
Query 924 ATTCAGAGGTTGAGGAAGCTAGTAGCGAAGAAATGTTCA-TCCCTGAGACAAAATTCAAC 982
|||| |||||||| |||||||||| ||||||||||| | ||| ||| | |||||||||
Sbjct 770 ATTCTGAGGTTGAAGAAGCTAGTAATGAAGAAATGTTTACTCC-TGAAATTAAATTCAAC 828
Query 983 TTCGTACCCATTGAAGAGTTGGGT-CTGTATGTTAATCAGAAGGAACTTATTGATCTTAT 1041
|| ||||||||||| ||||||||| | || || |||||||| || ||||||||| ||||
Sbjct 829 TTTGTACCCATTGATGAGTTGGGTACA-TACGTGAATCAGAAAGACCTTATTGATGTTAT 887
Query 1042 TGGAGTTGTTCAAAGTGTATCTCCTACCATGAGTATTAGAAGGAG-AACTGACAATGAGA 1100
|| |||||||||||||| |||||||||||||| ||||||||||| || ||||||||| |
Sbjct 888 CGGTGTTGTTCAAAGTGTTTCTCCTACCATGAGCATTAGAAGGAGGAA-TGACAATGAAA 946
Query 1101 TGATTCCTAAGAGGGATATAACTTTGGCTGATGAGTCAAGGAAAACTGTTGTGGTGTCCC 1160
|||| || ||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 947 TGATCCCAAAGAGGGATATAACTTTGGCTGATGAGTCAAAGAATACTGTTGTGGTGTCCC 1006
Query 1161 TGTGGAATGATCTTG-CAACTGGCATAGGTCAGGAGCTACTAGACATGGCTGATCAGTCA 1219
| ||||||||| ||| ||||||||||||| || || || ||||||||||||||| | |||
Sbjct 1007 TTTGGAATGAT-TTGGCAACTGGCATAGGCCAAGAACTGCTAGACATGGCTGATAA-TCA 1064
Query 1220 CC-TGTGATTGCAATCAAGTCTCTCAAAGTTGGAGATTTTCAAGGTGTTTCGTTGTCTAC 1278
|| ||| || || || ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1065 CCCTGTTATCGCGATTAAGTCTCTCAAAGTTGGAGATTTTCAAGGTGTTTCATTGTCAAC 1124
Query 1279 CATCAGCAGAAGCAATGTGGTTATTAACCCGGAATCACCAGAAGCTAAAAAGTTGAAATC 1338
|||||||||||||||||||| || || || || || ||||||||||| |||||||||||
Sbjct 1125 TATCAGCAGAAGCAATGTGGTGATAAATCCTGATTCTCCAGAAGCTAAGAAGTTGAAATC 1184
Query 1339 TTGGTTTGATTCTGAAGGCAAGGAAATATCCATGTCTTCTATTGGCTCAGGGATGAGCCC 1398
||||| |||| ||||||| || || | ||| |||||| |||||||||| || ||||| |
Sbjct 1185 TTGGTATGATGCTGAAGGGAAAGAGACATCTATGTCTGCTATTGGCTCTGGAATGAGTTC 1244
Query 1399 TTCTGCCAAAAATGGATCTCGGTCTTTGTATACTGACCGAGTGCTTCTCTCTCACATCAC 1458
||||||||| |||||||| | || ||||| |||| |||| ||||||||||||||||
Sbjct 1245 TTCTGCCAACAATGGATCAAGATCCATGTATTCTGATAGAGTTTTTCTCTCTCACATCAC 1304
Query 1459 AAGCAATCCATCTTTATTCGAAGAAAAGCCTGTATT-TTTCAGCACTAGGGCTTACATAA 1517
|||||| || |||||| ||| |||||||||||||| ||| || | ||| ||||||||||
Sbjct 1305 AAGCAACCCCTCTTTAGGCGAGGAAAAGCCTGTATTCTTT-AGTATTAGAGCTTACATAA 1363
Query 1518 GCTTCATCAAACCAGACCAAACAATGTGGTACCAAGCTTGTAAGACTTGTAACAAGAAAG 1577
|||||||||| |||||||| ||||||||||||| ||||| ||||| |||||||||||||
Sbjct 1364 GCTTCATCAAGCCAGACCAGACAATGTGGTACCGTGCTTGCAAGACCTGTAACAAGAAAG 1423
Query 1578 TGACAGAAGCACTTGACTCTGGTTACTGGTGTGAAGGATGCCAGAGAAAGTATGAAGAAT 1637
|||| || ||| | ||||||||||| ||||||||||| || |||| |||| || ||||||
Sbjct 1424 TGACTGAGGCAATGGACTCTGGTTATTGGTGTGAAGGTTGTCAGAAAAAGGATCAAGAAT 1483
Query 1638 GCAGCTTAAGGTACATAATGGCGGTGAAAGTCACCGACTCATCTGGAGAAACTTGGATTT 1697
|||| |||||||| |||||||||||||||||| | || ||| | || ||||||||| |||
Sbjct 1484 GCAGTTTAAGGTATATAATGGCGGTGAAAGTCTCTGATTCAACAGGTGAAACTTGGTTTT 1543
Query 1698 C-GTCATTCAACGATGAAGCAGAGAAGATTCTTGGATGTTCAGCTGATGAGCTCAACAAA 1756
| | ||||||| |||||||||||||||||| |||| || |||||||||| ||||| ||
Sbjct 1544 CTG-CATTCAATGATGAAGCAGAGAAGATTATTGGCTGCACAGCTGATGAACTCAATAAT 1602
Query 1757 CTAAAATCAGAGGAAGGTGAAGTAAATGAATATCAGACAAAACTGAAAGAGGCAACATGG 1816
||||||||||||||||||||||| ||||| | |||||||||||||||||| | || |||
Sbjct 1603 CTAAAATCAGAGGAAGGTGAAGTGAATGAGTTTCAGACAAAACTGAAAGAAACTACTTGG 1662
Query 1817 TCATCTCATGTCTTCCGGGTTAGTGTCACACAG-AATGAGTATAACGGTGAGAAGAGACA 1875
||||||||| ||||| || ||||||| | ||| || ||||||||| |||||||||||||
Sbjct 1663 TCATCTCATCTCTTCAGGATTAGTGTTTCTCAGCAA-GAGTATAACAGTGAGAAGAGACA 1721
Query 1876 GAGGGTAACTGTAAAAGGAGTAGCTCCTCTTGATTTTGCTGCTGAAACAAGATTGTTGCT 1935
|||| ||||||||| ||| || |||| |||| ||||| |||||||||||||| |||||
Sbjct 1722 GAGGATAACTGTAAGAGGTGTTTCTCCAATTGACTTTGCAGCTGAAACAAGATTATTGCT 1781
Query 1936 TCAAGACATCTCCAACAAGAACAAAACATCTCAGTA 1971
|||||||| ||||| || || | | ||||||||||
Sbjct 1782 CCAAGACATTTCCAAGAA-AA-AGA-CATCTCAGTA 1814
> Ahg940266 jgi|Araly1|940266|scaffold_600810.1
Length=1082
Score = 202 bits (109), Expect = 9e-51
Identities = 148/166 (89%), Gaps = 5/166 (3%)
Strand=Plus/Plus
Query 1099 GATGATTC-CTAAGAGGGATATAACTTTGGCTGATGAGTCAAGGAAAACTGTTGTGGTGT 1157
||||| || | ||||||||||||||||||||||||||| ||| |||||||||||||||||
Sbjct 349 GATGA-TCAC-AAGAGGGATATAACTTTGGCTGATGAGACAAAGAAAACTGTTGTGGTGT 406
Query 1158 CCCTGTGGAATGATCTTGCAACTGGCATAGGTCAGGAGCTACTAGACATGGCTGATCAGT 1217
|||| ||||||||||| |||||||||||||| || || || ||||||||||||||| | |
Sbjct 407 CCCTTTGGAATGATCTAGCAACTGGCATAGGCCATGAACTGCTAGACATGGCTGAT-AAT 465
Query 1218 CA-CCTGTGATTGCAATCAAGTCTCTCAAAGTTGGAGATTTTCAAG 1262
|| ||||| || || || ||||||||||||||||||||||||||||
Sbjct 466 CACCCTGTTATCGCGATTAAGTCTCTCAAAGTTGGAGATTTTCAAG 511
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78085002250
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5