BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G61070.1 Length=2175 Score E Sequences producing significant alignments: (Bits) Value Ahg950858 jgi|Araly1|950858|scaffold_802745.1 1463 0.0 Ahg887597 jgi|Araly1|887597|Al_scaffold_0299_1 948 0.0 Ahg950859 jgi|Araly1|950859|scaffold_802746.1 902 0.0 Ahg952009 jgi|Araly1|952009|scaffold_29900001.1 235 9e-61 > Ahg950858 jgi|Araly1|950858|scaffold_802745.1 Length=2023 Score = 1463 bits (792), Expect = 0.0 Identities = 1048/1173 (89%), Gaps = 12/1173 (1%) Strand=Plus/Plus Query 83 TGTCACATCTCCCGGATATGACAATGACCAGCGAATCTTCCGGCAAGAAA-TGCGGAGAG 141 |||| |||||||||| |||| | ||| || | |||||||||||||| ||| || ||||| Sbjct 4 TGTCTCATCTCCCGGTTATGGCTATGGCCGGAGAATCTTCCGGCAA-AAAGTGTGGAGAC 62 Query 142 GGTGACGGCAAAGTCGCCGGTAAAAGCCAGCGAAAGGTGGGTCTTGTTTATGACGAGACC 201 || ||||| | ||||||||| |||||||||||||||||||||||| |||| |||||| | Sbjct 63 GGCGACGGTAGAGTCGCCGGGAAAAGCCAGCGAAAGGTGGGTCTTATTTACGACGAGGCG 122 Query 202 ATGTGCAAACACGACACACCTAACGGTAAGGTTGA-CGTAGAGTGTCCCGATCGTATCAG 260 ||||||||||||||||||||| |||| ||| | | | | |||||||||||||| ||||| Sbjct 123 ATGTGCAAACACGACACACCTGACGGCGAGGATCACCCT-GAGTGTCCCGATCGCATCAG 181 Query 261 AGTTATCTGGGAGAAGCTTCAGCTCGCCGGAGTCACTCAAAGATGTGTGGTTCTTGGTGG 320 ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| | Sbjct 182 AGTTATCTGGGAGAAGCTTCAGCTCGCCGGAGTTTCTCAAAGATGTGTGCTTCTTGGTAG 241 Query 321 TAGTAAAGCTGAAGATAAGCATCTCAAATTGGTTCACACAAAGAAACATGTTAATTTAGT 380 ||| ||||| ||||||||||||||| ||||||||||||||||| | |||||||||||||| Sbjct 242 TAGCAAAGCGGAAGATAAGCATCTCCAATTGGTTCACACAAAGGACCATGTTAATTTAGT 301 Query 381 GAAGAGTATTAGCACAAAAAAGAAAGATTCTCGGAGAAACAAGATTGCTTCACAGTTGGA 440 ||||||||||| |||||| ||||||||| || | |||||| |||||||||||||||| | Sbjct 302 TAAGAGTATTAGTACAAAACAGAAAGATTATCAGCGAAACAGGATTGCTTCACAGTTGAA 361 Query 441 TTCGATTTATCTGAATGGAGGTTCATCTGAAGCTGCATATCTTGCAGCTGGATCTGTTGT 500 ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct 362 TTCGATTTATCTGAACAGAGGTTCATCTGAAGCAGCATATCTTGCAGCTGGATCTGTTGT 421 Query 501 AAAGGTGGCAGAGAAAGTTGCAGAAGGAGAGTTAGATTGTGGCTT-TGCTATTGTCAGGC 559 |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 422 AAAGGTGGCAGAGAAAGTTGCAGAAGGAGAGTTAGATTGTGG-TTATGCTATTGTCAGGC 480 Query 560 CCCCAGGACACCATGCCGAGTCAGATGAAGCCATGGGTTTTTGTTTATTCAACAATGTTG 619 ||||||| |||||||| ||| |||||||||| ||||| |||||||||||||||||| | | Sbjct 481 CCCCAGGGCACCATGCTGAGGCAGATGAAGCAATGGGGTTTTGTTTATTCAACAATATAG 540 Query 620 CCGTTGCTGCTAGTTTTTTACTAAACGAAAGACCTGATCTAGATGTCAAGAAAATTCTGA 679 |||| ||| |||||| |||||| ||||||||||| ||||||| ||||| |||||||||| Sbjct 541 CCGTCGCTTCTAGTTATTTACTTAACGAAAGACCGGATCTAGGGGTCAAAAAAATTCTGA 600 Query 680 TTGTCGATTGGGATATCCATCACGGAAATGGTACACAGAAGATGTTCTGGAAAGATTCTC 739 | || ||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 601 TCGTTGATTGGGATGTCCATCACGGAAATGGTACACAGAAGATGTTCTGGGAAGATCCTC 660 Query 740 GCGTACTAATATTCTCTGTTCATAGGCATGA-TCACGGAAGTTTCTATCCATTTGGCGAT 798 | || ||| | ||||| |||||||||||||| | | || |||||||||||| || ||| Sbjct 661 GTGTGCTATTTTTCTCAGTTCATAGGCATGAGT-ATGGGAGTTTCTATCCAGCGGGTGAT 719 Query 799 GATGGAGACTT-TAACATGGTTGGCGAAGGTCCAGGTGAAGGGTTTAACATTAACGTTCC 857 |||||||| || |||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct 720 GATGGAGA-TTATAACATGGTTGGGGAAGGTCCAGGTGAAGGGTTTAACATAAATGTTCC 778 Query 858 ATGGGAGCAAGGAGGATGTGGAGATGCAGACTATCTTGCCGTATGGAACCACATCTTGAT 917 |||||| |||||| |||| ||||||||||| |||||||| | |||| |||| |||||||| Sbjct 779 ATGGGATCAAGGACGATGCGGAGATGCAGATTATCTTGCTGCATGGGACCATATCTTGAT 838 Query 918 CCCTGTGACCAAGGAATTCAAACCAGATATTATTTTGCTTTCAGCTGGATTTGATGCAGC 977 |||||| | | |||||| || || ||||||||||||||||||||||||||||||||||| Sbjct 839 TCCTGTGGCGAGGGAATTTAACCCGGATATTATTTTGCTTTCAGCTGGATTTGATGCAGC 898 Query 978 TATTGGTGATCCGCTTGGGGGTTGTTGTGTTACCCCATATGGATATTCAGTTATGTTGAA 1037 ||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct 899 TATTGGTGATCCGCTCGGGGGTTGTCGTGTGACCCCATATGGATATTCAGTTATGTTGAA 958 Query 1038 GAAGCTGATGGAGTTTGCACATGGAAAGATAGTGCTGGCATTAGAGGGAGGATACAATCT 1097 |||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||| Sbjct 959 GAAGCTGATGGAGTTTGCACATGGAAAGATTGTGATGGTGTTAGAGGGAGGGTACAATCT 1018 Query 1098 TGAGTCA-TTGGGAAAGTCTTCACTCGCATGTGTCCAAGTTTTGCTTGAAGACAAACAAA 1156 ||| ||| ||| |||||||||||| |||||||||||||||||||||| ||||||||||| Sbjct 1019 TGACTCAGTTGC-AAAGTCTTCACTTGCATGTGTCCAAGTTTTGCTTGGAGACAAACAAA 1077 Query 1157 TTCATGGTTCATCTGAAACATACCCATTAGAATCTACACGGCGTGTCATACAAGCGGTAC 1216 |||||||||| |||||| |||||||||| || |||||| ||||||||||||||||||||| Sbjct 1078 TTCATGGTTCTTCTGAAGCATACCCATTTGAGTCTACATGGCGTGTCATACAAGCGGTAC 1137 Query 1217 GCGAGAGACTATGCACATATTGGCCTTCACTTG 1249 || |||| |||||| |||||||||||||||||| Sbjct 1138 GCAAGAGGCTATGCGCATATTGGCCTTCACTTG 1170 > Ahg887597 jgi|Araly1|887597|Al_scaffold_0299_1 Length=1731 Score = 948 bits (513), Expect = 0.0 Identities = 564/589 (96%), Gaps = 1/589 (0%) Strand=Plus/Plus Query 177 GGTGGGTCTTGTTTATGACGAGACCATGTGCAAACACGACACACCTAACGGTAAGGTTGA 236 ||||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct 1 GGTGGGTCTTG-TTATGACGAGACGATGTGCAAACACGACACACCTAACGGTGAGGTTGA 59 Query 237 CGTAGAGTGTCCCGATCGTATCAGAGTTATCTGGGAGAAGCTTCAGCTCGCCGGAGTCAC 296 |||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||| Sbjct 60 CGTAGAGTGTCCCGATCGCATCAGATTTATCTGGGAGAAGCTTCAGCTCGCCGGGGTCAC 119 Query 297 TCAAAGATGTGTGGTTCTTGGTGGTAGTAAAGCTGAAGATAAGCATCTCAAATTGGTTCA 356 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 120 CCAAAGATGTGTGGTTCTTGGTGGTAGTAAAGCGGAAGATAAGCATCTCAAATTGGTTCA 179 Query 357 CACAAAGAAACATGTTAATTTAGTGAAGAGTATTAGCACAAAAAAGAAAGATTCTCGGAG 416 ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| Sbjct 180 CACAAAGAAACATGTTAATTTCGTGAAGAGTATTAGCACAAAACAGAAAGATTCTCGGAG 239 Query 417 AAACAAGATTGCTTCACAGTTGGATTCGATTTATCTGAATGGAGGTTCATCTGAAGCTGC 476 ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct 240 AAACAGGATTGCTTCAGTGTTGGATTCGATTTATCTGAATGGAGGTTCATCTGAAGCCGC 299 Query 477 ATATCTTGCAGCTGGATCTGTTGTAAAGGTGGCAGAGAAAGTTGCAGAAGGAGAGTTAGA 536 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 300 ATATCTTGCAGCTGGATCTGTTGTAAATGTGGCAGAGAAAGTTGCAGAAGGAGAGTTAGA 359 Query 537 TTGTGGCTTTGCTATTGTCAGGCCCCCAGGACACCATGCCGAGTCAGATGAAGCCATGGG 596 ||||||||||||||| || |||||||||||||||||||||||| |||||||||||||||| Sbjct 360 TTGTGGCTTTGCTATAGTGAGGCCCCCAGGACACCATGCCGAGGCAGATGAAGCCATGGG 419 Query 597 TTTTTGTTTATTCAACAATGTTGCCGTTGCTGCTAGTTTTTTACTAAACGAAAGACCTGA 656 ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| || Sbjct 420 TTTTTGTTTATTCAACAATGTAGCCGTTGCTGCTAGTTATTTACTAAACGAAAGACCGGA 479 Query 657 TCTAGATGTCAAGAAAATTCTGATTGTCGATTGGGATATCCATCACGGAAATGGTACACA 716 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 480 TCTAGATGTCAAGAAAATTCTGATTGTTGATTGGGATATCCATCATGGAAATGGTACACA 539 Query 717 GAAGATGTTCTGGAAAGATTCTCGCGTACTAATATTCTCTGTTCATAGG 765 ||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 540 GAAGATGTTCTGGAAAGATCCTCGCGTACTGATATTCTCTGTTCATAGG 588 Score = 826 bits (447), Expect = 0.0 Identities = 712/833 (85%), Gaps = 46/833 (6%) Strand=Plus/Plus Query 762 TAGGCATGATCACGGAAGTTTCTATCCATTTGGCGATGATGGAGACTT-TAACATGGTTG 820 |||| ||||||||||||||||||||||| || ||||||||||| || ||||||||||| Sbjct 618 TAGGTATGATCACGGAAGTTTCTATCCAGCGGGTGATGATGGAGA-TTATAACATGGTTG 676 Query 821 GCGAAGGTCCAGGTGAAGGGTTTAACATTAACGTTCCATGGGAGCAAGGAGGATGTGGAG 880 | |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 677 GGGAAGGTCCAGGTAAAGGGTTTAACATAAACGTTCCATGGGAGCAAGGAGGATGTGGAG 736 Query 881 ATGCAGACTATCTTGCCGTATGGAACCACATCTTGATCCCTGTGACCAAGGAATTCAAAC 940 ||||||| |||||||||| |||| |||| |||||||| |||||||| ||||| || || | Sbjct 737 ATGCAGATTATCTTGCCGCATGGGACCATATCTTGATTCCTGTGACTAAGGAGTTTAATC 796 Query 941 CAGATATTATTTTGCTTTCAGCTGGATTTGATGCAGCTATTGGTGATCCGCTTGGGGGTT 1000 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 797 CCGATATTATTTTGCTTTCAGCTGGATTTGATGCAGCTATCGGTGATCCGCTTGGGGGTT 856 Query 1001 GTTGTGTTACCCCATATGGATATTCAGTTATGTTGAAGAAGCTGATGGAGTTTGCACATG 1060 |||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||| | Sbjct 857 GTTGTGTTACACCAGATGGATATTCAGTTATGTTGAAGAAGCTAATGGAGTTTGCACAAG 916 Query 1061 GAAAGATAGTGCTGGCATTAGAGGGAGGATACAATCTTGAGTCATTGGGAAAGTCTTCAC 1120 |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||| Sbjct 917 GAAAGATAGTGCTGGCGTTAGAGGGAGGGTACAATCTTGAGTCATTGGCAAAGTCTTCAC 976 Query 1121 TCGCATGTGTCCAAGTTTTGCTTGAAGACAAACAAATTCA-TGGTTCATCTGAAACATAC 1179 ||||||||||||||||| |||||||||| ||| |||||| || ||| |||| | ||||| Sbjct 977 TCGCATGTGTCCAAGTTCTGCTTGAAGAAAAAGGAATTCAATG-TTCTTCTGGAGCATAC 1035 Query 1180 CCATTAGAATCTACACGGCGTGTCATACA-AGCGGT-ACGCGAGAGACT-ATGCACA-TA 1235 |||||||||||||||||||||||| || | ||||| | ||||| || | | ||| | Sbjct 1036 CCATTAGAATCTACACGGCGTGTCGTA-AGAGCGGAGAATAGAGAG-CTGAGGTACAATG 1093 Query 1236 TTG--GCCTTCACT-TGACGCGTCAATGGCGTCTAATGAGAATTTAAAGAACCCAAGTGC 1292 || || | | | ||| | | ||| |||||||||||||||||||||||| |||||| Sbjct 1094 TTTTTGC-TG-ATTCTGATACATTGATGACGTCTAATGAGAATTTAAAGAACCTAAGTGC 1151 Query 1293 AGA-AAGAAACTCC-GCTGACGCCCTCCTTCGTGAAGTGGAAGAGTTAAAGTCTCTAATG 1350 || || |||| || |||||||| |||||| ||||||||||||||||||||||||| || Sbjct 1152 GGACAA-AAAC-CCTGCTGACGCTATCCTTCATGAAGTGGAAGAGTTAAAGTCTCTA-TG 1208 Query 1351 G-CTGCCCGAGATGGAGAACTGGAGGCAAGGAGAAAAGAGTTAAAGGCCAAAAATAAGGA 1409 | |||| |||||||||||| |||||||||||||||||||||||||||||||||| | ||| Sbjct 1209 GGCTGCACGAGATGGAGAATTGGAGGCAAGGAGAAAAGAGTTAAAGGCCAAAAAGATGGA 1268 Query 1410 GCTAGAAGCGAACGAGAAGGAGCTAGAAGCGGGACTAATGTTGATTCGCGCTCGGGAGGA 1469 ||||||| | || | | || |||||||| || ||||||| || || Sbjct 1269 GCTAGAA---A-CG---------T-G--GC-----TAATGTTGGTTGGCGCTCGAGAAGA 1307 Query 1470 TGTAATCT-GTGGTCTTCATGCAAAAATAGAGAGTTTGCA-GCAGGAGCGAGATGAGGCG 1527 || | | | ||||||||| ||| ||| ||||||||||| | || |||||||||||||||| Sbjct 1308 TG-AGTTTCGTGGTCTTCGTGCCAAAGTAGAGAGTTTG-ATGCGGGAGCGAGATGAGGCG 1365 Query 1528 GTAGCGAAAGCTGAACGCATAGATAAGGAACTCCAAGAGGATAGGGCAAGAAG 1580 |||||||||||||| || ||||||||||||||||||| || ||| ||||||| Sbjct 1366 GTAGCGAAAGCTGAGTGCCTAGATAAGGAACTCCAAGAAGAAAGGCCAAGAAG 1418 > Ahg950859 jgi|Araly1|950859|scaffold_802746.1 Length=2426 Score = 902 bits (488), Expect = 0.0 Identities = 544/572 (95%), Gaps = 0/572 (0%) Strand=Plus/Plus Query 80 GACTGTCACATCTCCCGGATATGACAATGACCAGCGAATCTTCCGGCAAGAAATGCGGAG 139 ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||| Sbjct 1 GACTGTCACATCTCCCGGAGATGACAATGACCGGCGAATCTTCCGGCAAGAAATGCGGAG 60 Query 140 AGGGTGACGGCAAAGTCGCCGGTAAAAGCCAGCGAAAGGTGGGTCTTGTTTATGACGAGA 199 | |||| ||| ||| ||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 61 ACGGTGGCGGTAAATTCGCCGGAAAAAGCCAGCGAAAGGTGGGTCTTGTTTACGACGAGA 120 Query 200 CCATGTGCAAACACGACACACCTAACGGTAAGGTTGACGTAGAGTGTCCCGATCGTATCA 259 | ||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct 121 CGATGTGCAAACACGACACACCTAACGGTGAGGTTGACGTAGAGTGTCCCGATCGCATCA 180 Query 260 GAGTTATCTGGGAGAAGCTTCAGCTCGCCGGAGTCACTCAAAGATGTGTGGTTCTTGGTG 319 || |||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 181 GATTTATCTGGGAGAAGCTTCAGCTCGCCGGGGTCACCCAAAGATGTGTGGTTCTTGGTG 240 Query 320 GTAGTAAAGCTGAAGATAAGCATCTCAAATTGGTTCACACAAAGAAACATGTTAATTTAG 379 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 241 GTAGTAAAGCGGAAGATAAGCATCTCAAATTGGTTCACACAAAGAAACATGTTAATTTCG 300 Query 380 TGAAGAGTATTAGCACAAAAAAGAAAGATTCTCGGAGAAACAAGATTGCTTCACAGTTGG 439 |||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||| Sbjct 301 TGAAGAGTATTAGCACAAAACAGAAAGATTCTCGGAGAAACAGGATTGCTTCAGTGTTGG 360 Query 440 ATTCGATTTATCTGAATGGAGGTTCATCTGAAGCTGCATATCTTGCAGCTGGATCTGTTG 499 ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 361 ATTCGATTTATCTTAATGGAGGTTCATCTGAAGCCGCATATCTTGCAGCTGGATCTGTTG 420 Query 500 TAAAGGTGGCAGAGAAAGTTGCAGAAGGAGAGTTAGATTGTGGCTTTGCTATTGTCAGGC 559 |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 421 TAAATGTGGCAGAGAAAGTTGCAGAAGGAGAGTTAGATTGTGGCTTTGCTATAGTGAGGC 480 Query 560 CCCCAGGACACCATGCCGAGTCAGATGAAGCCATGGGTTTTTGTTTATTCAACAATGTTG 619 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | Sbjct 481 CCCCAGGACACCATGCCGAGGCAGATGAAGCCATGGGTTTTTGTTTATTCAACAATGTAG 540 Query 620 CCGTTGCTGCTAGTTTTTTACTAAACGAAAGA 651 ||||||||||||||| |||||||||||||||| Sbjct 541 CCGTTGCTGCTAGTTATTTACTAAACGAAAGA 572 Score = 669 bits (362), Expect = 0.0 Identities = 450/492 (91%), Gaps = 8/492 (2%) Strand=Plus/Plus Query 762 TAGGCATGATCACGGAAGTTTCTATCCATTTG-GCGATGATGGAGACTT-TAACATGGTT 819 |||| ||||||||||||||||||||||| | | ||||||||||| || |||||||||| Sbjct 770 TAGGTATGATCACGGAAGTTTCTATCCA-GCGAGTGATGATGGAGA-TTATAACATGGTT 827 Query 820 GGCGAAGGTCCAGGTGAAGGGTTTAACATTAACGTTCCATGGGAGCAAGGAGGATGTGGA 879 || |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| Sbjct 828 GGGGAAGGTCCAGGTAAAGGGTTTAACATAAACGTTCCATGGGAGCAAGGAGGATGTGGA 887 Query 880 GATGCAGACTATCTTGCCGTATGGAACCACATCTTGATCCCTGTGACCAAGGAATTCAAA 939 |||||||| |||||||||| |||| |||| |||||||| |||||||| ||||| || || Sbjct 888 GATGCAGATTATCTTGCCGCATGGGACCATATCTTGATTCCTGTGACTAAGGAGTTTAAT 947 Query 940 CCAGATATTATTTTGCTTTCAGCTGGATTTGATGCAGCTATTGGTGATCCGCTTGGGGGT 999 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 948 CCCGATATTATTTTGCTTTCAGCTGGATTTGATGCAGCTATCGGTGATCCGCTTGGGGGT 1007 Query 1000 TGTTGTGTTACCCCATATGGATATTCAGTTATGTTGAAGAAGCTGATGGAGTTTGCACAT 1059 |||||| |||| ||| |||||||||||||||||||||||||||| |||||||||||||| Sbjct 1008 TGTTGTATTACACCAGATGGATATTCAGTTATGTTGAAGAAGCTAATGGAGTTTGCACAA 1067 Query 1060 GGAAAGATAGTGCTGGCATTAGAGGGAGGATACAATCTTGAGTCATTGGGAAAGTCTTCA 1119 ||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||| Sbjct 1068 GGAAAGATAGTGCTGGCGTTAGAGGGAGGGTACAATCTTGAGTCATTGGCAAAGTCTTCA 1127 Query 1120 CTCGCATGTGTCCAAGTTTTGCTTGAAGACAAACAAATTCA-TGGTTCATCTGAAACATA 1178 |||||||||||||||||| |||||||||| ||| |||||| || ||| |||| | |||| Sbjct 1128 CTCGCATGTGTCCAAGTTCTGCTTGAAGAAAAAGGAATTCAATG-TTCTTCTGGAGCATA 1186 Query 1179 CCCATTAGAATCTACACGGCGTGTCATACA-AGCGGTACGCGAGAGACTATGCACATATT 1237 |||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||| Sbjct 1187 CCCATTAGAATCTACACGGCGTGTCATA-AGAGCGGTACGCGAAAGACTATGCACATATT 1245 Query 1238 GGCCTTCACTTG 1249 |||||||||||| Sbjct 1246 GGCCTTCACTTG 1257 Score = 270 bits (146), Expect = 3e-71 Identities = 274/330 (83%), Gaps = 31/330 (9%) Strand=Plus/Plus Query 1258 ATGGCGTCTAATGAGAATTTAAAGAACCCAAGTGCAGA-AAGAAACTCC-GCTGACGCCC 1315 ||| |||||||||||||||||||||||| |||||| || || |||| || |||||||| Sbjct 1677 ATGACGTCTAATGAGAATTTAAAGAACCTAAGTGCGGACAA-AAAC-CCTGCTGACGCTA 1734 Query 1316 TCCTTCGTGAAGTGGAAGAGTTAAAGTCTCTAAT-GGCTGCCCGAGATGGAGAACTGGAG 1374 |||||| |||||||||||||||||||||||| || |||||| |||||||||||| ||||| Sbjct 1735 TCCTTCATGAAGTGGAAGAGTTAAAGTCTCT-ATGGGCTGCACGAGATGGAGAATTGGAG 1793 Query 1375 GCAAGGAGAAAAGAGTTAAAGGCCAAAAATAAGGAGCTAGAAGCGAACGAGAAGGAGCTA 1434 ||||||||||||||||||||||||||||| | |||||||||| | || | Sbjct 1794 GCAAGGAGAAAAGAGTTAAAGGCCAAAAAGATGGAGCTAGAA---A-CG---------T- 1839 Query 1435 GAAGCGGGACTAATGTTGATTCGCGCTCGGGAGGATGTAATCT-GTGGTCTTCATGCAAA 1493 | || |||||||| || ||||||| || |||| | | | ||||||||| ||| || Sbjct 1840 G--GC-----TAATGTTGGTTGGCGCTCGAGAAGATG-AGTTTCGTGGTCTTCGTGCCAA 1891 Query 1494 AATAGAGAGTTTGCA-GCAGGAGCGAGATGAGGCGGTAGCGAAAGCTGAACGCATAGATA 1552 | ||||||||||| | || |||||||||||||||||||||||||||||| ||| |||||| Sbjct 1892 AGTAGAGAGTTTG-ATGCGGGAGCGAGATGAGGCGGTAGCGAAAGCTGAGCGCCTAGATA 1950 Query 1553 AGGAACTCCAAGAGGATAGGGCAAGAAGCC 1582 ||||||||||||| || ||| ||||||||| Sbjct 1951 AGGAACTCCAAGAAGAAAGGCCAAGAAGCC 1980 Score = 178 bits (96), Expect = 2e-43 Identities = 106/111 (95%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 655 GATCTAGATGTCAAGAAAATTCTGATTGTCGATTGGGATATCCATCACGGAAATGGTACA 714 ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||| Sbjct 630 GATCTAGGTGTCAAGAAAATTCTGATTGTTGATTGGGATATCCATCATGGAAATGGTACA 689 Query 715 CAGAAGATGTTCTGGAAAGATTCTCGCGTACTAATATTCTCTGTTCATAGG 765 ||||||||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 690 CAGAAGATGTTCTGGAAAGATCCTCGCGTACTGATATTCTCTGTTCATAGG 740 > Ahg952009 jgi|Araly1|952009|scaffold_29900001.1 Length=288 Score = 235 bits (127), Expect = 9e-61 Identities = 191/222 (86%), Gaps = 4/222 (2%) Strand=Plus/Plus Query 83 TGTCACATCTCCCGGATATGACAATGACCAGCGAATCTTCCGGCAAGAAA-TGCGGAGAG 141 |||| |||||||||| |||| | ||| || | |||||||||||||| ||| || ||||| Sbjct 4 TGTCTCATCTCCCGGTTATGGCTATGGCCGGAGAATCTTCCGGCAA-AAAGTGTGGAGAC 62 Query 142 GGTGACGGCAAAGTCGCCGGTAAAAGCCAGCGAAAGGTGGGTCTTGTTTATGACGAGACC 201 || ||||| | ||||||||| |||||||||||||||||||| ||| |||| |||||| | Sbjct 63 GGCGACGGTAGAGTCGCCGGGAAAAGCCAGCGAAAGGTGGGGCTTATTTACGACGAGGCG 122 Query 202 ATGTGCAAACACGACACACCTAACGGTAAGGTTGA-CGTAGAGTGTCCCGATCGTATCAG 260 ||||||||||||||||||||| |||| ||| | | | | |||||||||||||| ||||| Sbjct 123 ATGTGCAAACACGACACACCTGACGGCGAGGATCACCCT-GAGTGTCCCGATCGCATCAG 181 Query 261 AGTTATCTGGGAGAAGCTTCAGCTCGCCGGAGTCACTCAAAG 302 ||||||||||||||||||||||||||||||||| ||||||| Sbjct 182 AGTTATCTGGGAGAAGCTTCAGCTCGCCGGAGTTTCTCAAAG 223 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 81855936505 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5