BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G61350.1
Length=2529
Score E
Sequences producing significant alignments: (Bits) Value
Ahg950891 jgi|Araly1|950891|scaffold_802778.1 3821 0.0
Ahg496102 jgi|Araly1|496102|fgenesh2_kg.8__1918__AT5G59700.1 202 1e-50
Ahg937338 jgi|Araly1|937338|scaffold_501529.1 185 1e-45
> Ahg950891 jgi|Araly1|950891|scaffold_802778.1
Length=2570
Score = 3821 bits (2069), Expect = 0.0
Identities = 2373/2523 (94%), Gaps = 8/2523 (0%)
Strand=Plus/Plus
Query 1 ATGGGAGGAGATTTTCGTCATTTCTCCTCCCACGTTTCTCTCCTCCTCCTCTTCCTTCTC 60
||||||||||| ||||||||||||||||||||||| ||||| ||||||||| || |||||
Sbjct 22 ATGGGAGGAGAGTTTCGTCATTTCTCCTCCCACGTGTCTCTTCTCCTCCTCCTCTTTCTC 81
Query 61 ATCGTCAAATCCAGTTCTTCATTCACTCCAGCTGATAACTACCTCATCGATTGTGGCTCC 120
||||||||||||| || ||||| |||||||||||||| ||||||||||||||||| |||
Sbjct 82 GTCGTCAAATCCAGCTCCTCATTTACTCCAGCTGATAATTACCTCATCGATTGTGGTTCC 141
Query 121 TCCGACGAAACAAAACTCTCCGACGGTCGTAATTTCAAATCCGATCAACAATCCGTCGCG 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 142 TCCGGCGAAACAAAACTCTCCGACGGTCGTAATTTCAAATCCGATCAACAATCCGTCGCG 201
Query 181 TTTCTTCAAACAGATGAAGACATCAAAACCTCCGTCGACTCAATTCCGATCACCGACTCT 240
|||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||||
Sbjct 202 TTTCTTCAAACAGACGAAGACATCAAAACCTCTGTCGACTCAATCCCGATCTCCGACTCC 261
Query 241 AATGCCAGTACCCTTCCCTTATACTTAACCGCTAGAATCTTCGCCGGAAAATCAACTTAC 300
||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 262 AATTCTAGTACCCTTCCCTTATACTTAACCGCTCGAATCTTCGCCGGAAAATCAACTTAC 321
Query 301 TCCTTCTACATTTCACGACCTGGTCGTCACTGGATCCGTCTCCATTTTTATCCTCTCAAT 360
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 322 TCTTTCTACATTTCACGACCTGGTCGTCACTGGATCCGCCTCCATTTTTATCCTCTCAAT 381
Query 361 CATCCTCTCTACAATCTAACAAACTCCGTCTTCTCCGTCACCACCGACACCACCGTCCTC 420
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 382 CATCCTCTATACAATCTCACAAACTCCGTCTTCTCCGTCACCACCGACACCACCGTTCTC 441
Query 421 TTACACGATTTCTCCGCCGGAGATACTTCTTCTATCGTCTTCAAAGAATATCTAATCTAC 480
|||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||
Sbjct 442 TTACACGATTTCTCCGCCGGAGATACTTCTTCGATCGCCTTCAAAGAATATCTAATCTAC 501
Query 481 GCCGCAGAGAAACTCTCTCTTTATTTCAAACCACATAAAGGCTCCACCGCTTTTATCAAC 540
||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 502 GCCGCCGAGAAACTCTCTCTCTATTTCAAACCACATAAAGGCTCCACAGCTTTTATCAAC 561
Query 541 GCCGTTGAAATCGTCTCTGTTCCGGACGAGCTTGTTCCGGACTCTGCTTCCTCTGTTCCT 600
||||||||||||||||| ||||| ||||||||||| ||||| ||||||||||||||||||
Sbjct 562 GCCGTTGAAATCGTCTCCGTTCCCGACGAGCTTGTCCCGGATTCTGCTTCCTCTGTTCCT 621
Query 601 CAAGCTCCTGATTTCAAAGGCTTAAGTAGCTTCTCTCTTGAGATCCTTCATCGGATAAAT 660
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 622 CAAGCTCCTGATTTCAAAGGCTTAAGCAGCTTCTCTCTTGAGATCCTTCACCGGATAAAC 681
Query 661 ATCGGAGGAGATTTGATTTCTCCGAAGATAGATCCTCTCTCACGCACTTGGCTCTCTGAT 720
|| || || ||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 682 ATTGGCGGCGATTTGATTTCTCCGAAAATTGATCCTCTCTCACGCACTTGGCTCTCTGAT 741
Query 721 AAACCTTACAATACGTTCCCTGAAGGTTCGAGAAATGTCACTGTTGATCCTAGTACGATT 780
|||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 742 AAACCTTACAATTCGTTCCCTGAAGGTTCGAGAAATGTCACCGTTGATCCAAGTACGATT 801
Query 781 ACTTATCCAGACGGTGGAGCTACGGCGTTGATCGCTCCTAATCCGGTTTACGCCACCGCG 840
|||||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| |||
Sbjct 802 ACTTATCCAGACGGCGGAGCCACGGCGTTGATTGCTCCTAATCCGGTTTATGCCACGGCG 861
Query 841 GAGGAAATGGCCGATGCACAAACCTCGCAACCTAATTTCAATCTCTCATGGAGAATGAGT 900
||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 862 GAGGAAATGGCGGATGCACAAACCTCGCAACCTAATTTCAATCTTTCATGGAGAATGAGC 921
Query 901 GTTGATTTTGGTCATGATTACTTCATTAGGTTACATTTTTGTGACATTGTAAGCAAATCG 960
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 922 GTTGATTTTGGTCATGATTACTTCATTAGGCTACATTTTTGTGACATTGTAAGCAAATCG 981
Query 961 CTTAACGACCTTATCTTCAATGTTTTCATCAACAAGCTCTCTGCAATCTCTGCACTTGAC 1020
|| ||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 982 CTCAACGATCTTGTCTTCAATGTTTTCATCAACAAGCTCTCTGCAATCTCCGCACTTGAT 1041
Query 1021 CTCTCCTCACTAACCAGCGCTTTAGGTACAGCGTATTACGCGGATTTCGTGCTTAATGCG 1080
||||| |||||||||| ||||||||| || ||||||||||||||||| ||||||||||||
Sbjct 1042 CTCTCTTCACTAACCAACGCTTTAGGCACCGCGTATTACGCGGATTTTGTGCTTAATGCG 1101
Query 1081 TCTACGATCACCAATGGTTCGATCTTGGTTCAGGTTGGTCCGACTCCGAATCTTCAGTCG 1140
||||||||||||||||| ||||||||||| || |||||||| ||||||| ||||||||||
Sbjct 1102 TCTACGATCACCAATGGCTCGATCTTGGTCCAAGTTGGTCCTACTCCGAGTCTTCAGTCG 1161
Query 1141 GGTAAACCGAATGCGATACTTAACGGTTTAGAGATCATGAAGCTGAACAATGCTGCTGGG 1200
|||||||||||||| || |||||||||||||||||||||||||||||||||||||| |||
Sbjct 1162 GGTAAACCGAATGCCATTCTTAACGGTTTAGAGATCATGAAGCTGAACAATGCTGCCGGG 1221
Query 1201 AGTTTAGATGGACTTTTTGGAGTTGATGGGAAATACAAAGGACCGATCGGTGGTATGTCA 1260
||||||||||| ||||| || ||||||||||||||||||||||| || ||||| |||||
Sbjct 1222 AGTTTAGATGGGCTTTTCGGGGTTGATGGGAAATACAAAGGACCTATTGGTGGGATGTCC 1281
Query 1261 TCTAAGAAGCTTGCTATTGCGGGTATTGGGTTTGTGATGGCGCTAACCGCTTTCTTAGGG 1320
||||| |||||||||||||||||||| || |||||||||||||||||||| || ||||||
Sbjct 1282 TCTAAAAAGCTTGCTATTGCGGGTATCGGATTTGTGATGGCGCTAACCGCATTGTTAGGG 1341
Query 1321 GTTGTCGTGTTGCTTGTTAGATGGCAGAGACGTCCTAAAGACTGGCAAAAACAGAATAGT 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1342 GTTGTCGTGTTGCTTGTTAGATGGCAGAGACGTCCTAAAGACTGGCAAAAACAGAATAGT 1401
Query 1381 TTCTCGTCATGGTTGCTTCCTTTACACGCAAGTCACTCGAGTTACATCTCGAGCAAAGGC 1440
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1402 TTCTCGTCATGGTTGCTTCCTTTGCACGCAAGTCACTCGAGTTACATCTCAAGCAAAGGC 1461
Query 1441 GGGTCAACGTCGAGGCGGATGAGTATTTTCGGGTCAAAGAAGAGTAAGAGCAATGGATTC 1500
||||| ||||||||||||||||| ||||||||||||||||| || || ||||||||||||
Sbjct 1462 GGGTCTACGTCGAGGCGGATGAGCATTTTCGGGTCAAAGAAAAGCAAAAGCAATGGATTC 1521
Query 1501 TCTAGCTTCTTCTCAAACCAGGGATTAGGTCGGTACTTTCCCTTTACCGAACTACAGACC 1560
|||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||| |
Sbjct 1522 TCTAGCTTCTTCTCGAACCAAGGATTAGGACGGTACTTTCCCTTTACTGAACTACAGATC 1581
Query 1561 GCGACACAAAATTTTGACGAGAATGCTGTG-TGTGGAGTCGGAGGATTCGGAAAAGTCTA 1619
|| || ||||||||||| |||||| ||||| | |||||||||||||||||||||||||||
Sbjct 1582 GCTACGCAAAATTTTGATGAGAATTCTGTGAT-TGGAGTCGGAGGATTCGGAAAAGTCTA 1640
Query 1620 CATAGGAGAAATTGATGGTGGGACGCAGGTCGCGATCAAAAGAGGGAGTCAGAGTTCGGA 1679
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1641 CATAGGAGAAATTGATGGTGGGACGCAGGTCGCGATCAAAAGAGGGAGTCAGAGTTCAGA 1700
Query 1680 GCAAGGAATCAACGAGTTTCAAACAGAGATTCAGATGTTGTCCAAACTCAGACATAGACA 1739
||||||||| ||||||||||| || |||||||||||| |||||||||| || || |||||
Sbjct 1701 GCAAGGAATAAACGAGTTTCAGACGGAGATTCAGATGCTGTCCAAACTTAGGCACAGACA 1760
Query 1740 TTTGGTTTCTCTAATCGGATTTTGCGATGAAAACAAAGAGATGATTCTCGTCTACGAATA 1799
|||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1761 TTTGGTGTCTTTAATCGGATTTTGCGATGAAAACAAAGAGATGATTCTCGTATACGAATA 1820
Query 1800 CATGTCAAACGGTCCTCTGCGTGACCATCTCTACGGCTCCAAAGAAAATGACCCTAACCC 1859
|||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct 1821 CATGTCAAACGGTCCTCTGCGTGACCATCTATACGGCTCCAAAGAGAATGACCCCAACCC 1880
Query 1860 TATTCCTACCTTGTCCTGGAAGCAACGTCTAGAGATCTGCATTGGATCAGCGCGTGGACT 1919
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1881 TATTCCTACTTTATCCTGGAAGCAACGTCTAGAGATCTGCATTGGATCAGCGCGTGGACT 1940
Query 1920 CCACTATCTCCACACGGGTGCAGCGCAGGGGATCATCCACCGCGACGTCAAGACCACCAA 1979
|||||||||||||||||||||||| || || ||||||||||||||||| |||||||| ||
Sbjct 1941 CCACTATCTCCACACGGGTGCAGCACAAGGAATCATCCACCGCGACGTTAAGACCACTAA 2000
Query 1980 CATCCTCTTGGACGAGAACCTAGTCGCTAAAGTTTCTGATTTTGGACTTTCAAAAGATGC 2039
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2001 CATTCTCTTGGACGAGAACCTAGTCGCTAAAGTTTCTGATTTTGGACTTTCAAAAGATGC 2060
Query 2040 GCCTATGGATGAAGGGCATGTAAGTACCGCGGT-AAAGGGTAGTTTCGGGTATTTAGACC 2098
|||||||| |||||||||||||||| ||||| ||| ||||||||||||||||||||||
Sbjct 2061 CCCTATGGAACAAGGGCATGTAAGTACGGCGGTGAAA-GGTAGTTTCGGGTATTTAGACC 2119
Query 2099 CCGAATACTTCCGCAGACAACAACTCACTGATAAATCCGATGTTTACTCATTCGGTGTGG 2158
|||| |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 2120 CCGAGTACTTCCGCAGACAACAACTCACTGATAAATCTGATGTTTACTCGTTCGGTGTGG 2179
Query 2159 TGTTATTCGAGGTTCTTTGCGCGAGGCCAGTGATAAACCCACAGTTACCTAGAGAACAAG 2218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2180 TGTTATTCGAGGTTCTTTGCGCGAGGCCAGTGATAAACCCACAGTTACCTAGAGAACAAG 2239
Query 2219 TTAACTTAGCAGAATATGCTATGAATTTGCATAGAAAAGGTATGTTGGAGAAAATCATCG 2278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2240 TTAACTTAGCAGAATATGCTATGAATTTGCATAGAAAAGGTATGTTGGAGAAAATCATCG 2299
Query 2279 A-CCCGAAAATCGTGGGAACGATTAGTAAAGGATCGTTAAGGAAATTCGTGGAGGCTGCA 2337
| ||| |||||||||||||| ||||||||||| |||||||| ||||||||||||||||||
Sbjct 2300 ATCCC-AAAATCGTGGGAACAATTAGTAAAGGGTCGTTAAGAAAATTCGTGGAGGCTGCA 2358
Query 2338 GAAAAATGTTTGGCAGAGTACGGTGTTGATCGACCGGGAATGGGAGATGTGTTGTGGAAT 2397
|| ||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 2359 GAGAAATGTTTGGCTGAGTACGGTGTTGATCGGCCTGGAATGGGAGATGTGTTGTGGAAT 2418
Query 2398 CTTGAATATGCTTTGCAGCTTCAAGAAGCATCGGCTCAAGTTGATTTATCGGAGGATAAG 2457
||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||
Sbjct 2419 CTTGAATATGCTTTGCAACTTCAAGAAGCGTCGGCTCAAGTTGATTTGTCGGAGGATAAA 2478
Query 2458 ACTACAATGAATATTGAAATGGACCT-TATTCCCGGCGAGGAAATGCAATCTCCGTCGCA 2516
|||||||||||||||||||||||| | |||||||||||||||||||||| |||| |||||
Sbjct 2479 ACTACAATGAATATTGAAATGGAC-TATATTCCCGGCGAGGAAATGCAAACTCCATCGCA 2537
Query 2517 TTC 2519
|||
Sbjct 2538 TTC 2540
> Ahg496102 jgi|Araly1|496102|fgenesh2_kg.8__1918__AT5G59700.1
Length=2722
Score = 202 bits (109), Expect = 1e-50
Identities = 429/577 (74%), Gaps = 47/577 (8%)
Strand=Plus/Plus
Query 1876 TGGAAGCAACGTCTAGAGATCTGCATTGGATCAGCGCGTGGACTCCACTATCTCCACACG 1935
||||||||||| || ||||| |||||||||||||| | ||| | || |||||||| ||
Sbjct 1823 TGGAAGCAACGGCTTGAGATATGCATTGGATCAGCAAGAGGATTGCATTATCTCCATACC 1882
Query 1936 GGTGCA-GCG-CAGGGGATCATCCACCGCGACGTCAAGA-CCACCAACATCCT-CTTGGA 1991
|||| | ||| | | | || ||| | ||||| || | || ||||||| | | | ||
Sbjct 1883 GGTG-ACGCGAAACCCG-TGATTCACAGAGACGTGAA-ATCCGCCAACATATTAC-TCGA 1938
Query 1992 CGAGAACCT-AGTCGCTAAAGTTTCTGATTTTGGACTTTCAAAAGATGC-G--CC--TAT 2045
|||||| || | | ||||||||| | || |||||||| || |||| | | || ||
Sbjct 1939 CGAGAATCTCA-TGGCTAAAGTTGCAGACTTTGGACTGTC-TAAGA-CCGGACCCGAGAT 1995
Query 2046 GGATGAAG-GGCATGTAAGTACCGCGGT-AAAGGGTAGTTTCGGGTAT-TTAGACCCCGA 2102
||| || ||||| ||||||||||| ||| || |||||||| ||| || || || ||
Sbjct 1996 CGAT-CAGACTCATGTGAGTACCGCGGTCAAA-GGAAGTTTCGGATATCTT-GATCCGGA 2052
Query 2103 ATACTTCCGCAGACAACAACTCACTGATAAATCCGATGTTTACTCATTCGGTGTGGTGT- 2161
||||||| | |||||||| ||||| || ||||| ||||||||||| || || ||||| |
Sbjct 2053 ATACTTCAGAAGACAACAGCTCACAGAGAAATCAGATGTTTACTCTTTTGGAGTGGT-TA 2111
Query 2162 TATTCGAGGTTCTTTGCGCGAGGCCAGTGATAAACCC-ACAGTTACCTAGAGAACA-AGT 2219
| ||||||||||| |||||||| || || ||| |||| ||| ||| ||||| | | ||
Sbjct 2112 TGTTCGAGGTTCTCTGCGCGAGACCGGTTATAGACCCGACACTTA-ATAGAG-AGATGGT 2169
Query 2220 TAACT-TAGCAGAATATGCTATGAATTTGCA-TAGAAAAGG-TATGTTGGAGA-AAATCA 2275
|| | |||| |||| || ||||| | ||| || ||||| || || || | | ||||
Sbjct 2170 GAA-TCTAGCGGAATGGGCGATGAAATGGCAGAAG-AAAGGACATCTT-GA-ACATATCA 2225
Query 2276 TCGACCCGA-AAAT-CGTGGGAACGATTAGTAAAGGA-TCGTTAAGGAAA--TTCGTGGA 2330
| || || | | | || || || || || | || ||| ||| |||| || || ||
Sbjct 2226 TTGATCC-ATCACTGCGAGGTAA-AATCAG-ACCTGATTCGCTAA-GAAAGTTTGGT-GA 2280
Query 2331 GGCTGCAGAAAAATGTTTGGCAGAGTACGGTGTTGATCGACCGGGAATGGGAGATGTGTT 2390
| | || |||||||| || || || || |||||| |||| |||||||||||||||
Sbjct 2281 AACAGGGGAGAAATGTTTAGCTGATTATGGAGTTGATAGACCATCAATGGGAGATGTGTT 2340
Query 2391 GTGGAATCTTGAATATGCTTTGCAGCTTCAAGAAGCA 2427
||||||||||||||||||||||||||| |||||||||
Sbjct 2341 GTGGAATCTTGAATATGCTTTGCAGCTACAAGAAGCA 2377
> Ahg937338 jgi|Araly1|937338|scaffold_501529.1
Length=2530
Score = 185 bits (100), Expect = 1e-45
Identities = 433/590 (73%), Gaps = 38/590 (6%)
Strand=Plus/Plus
Query 1862 TTCCTACCTTGTCCTGGAAGCAACGTCTAGAGATCTGCATTGGATCAGCGCGTGGACTCC 1921
|||||| |||| | ||||| ||||| || |||||||||||||| | || | ||| | |
Sbjct 1741 TTCCTAGCTTGACTTGGAAACAACGGCTTGAGATCTGCATTGGCGCGGCTAGAGGATTGC 1800
Query 1922 ACTATCTCCACACGGGTGCA-GCG-CAGGGGATCATCCACCGCGACGTCAAGA-CCACCA 1978
| || || |||||||||| | || | || |||| ||| | ||||| || | | | |
Sbjct 1801 ATTACCTTCACACGGGTG-ACTCGAAACCGG-TCATTCACAGAGACGTGAA-ATCTGCAA 1857
Query 1979 ACATCCT-CTTGGACGAGAACCT-AGTCGCTAAAGTTTCTGATTTTGGACTTTCAAAAGA 2036
|||| | | | ||||||||| | | | ||||||||| | || |||||||| || ||||
Sbjct 1858 ACATATTAC-TCGACGAGAACTTCA-TGGCTAAAGTTGCAGACTTTGGACTGTC-CAAGA 1914
Query 2037 -T-G-CGCCTA--TGGATGAAGGGCATGTAAGTACCGCGGT-AAAGGGTAGTTTCGGGTA 2090
| | | || | | ||| || ||||| ||||| || || ||| || ||||| || ||
Sbjct 1915 CTGGAC-CCGAGCTTGATCAAACTCATGTGAGTACTGCTGTCAAA-GGAAGTTTTGGATA 1972
Query 2091 T-TTAGACCCCGAATACTTCCGCAGACAACAACTCACTGATAAATCCGATGTTTACTCAT 2149
| || |||||||| |||||| | || ||||| |||||||| ||||||||||||||||| |
Sbjct 1973 TCTT-GACCCCGAGTACTTCAGAAGGCAACAGCTCACTGAGAAATCCGATGTTTACTCCT 2031
Query 2150 TCGGTG-TGGTGTTATTCGAGGTTCTTTGCGCGAGGCCAGTGATAAACCC-ACAGTTACC 2207
|||| | || | || || |||||||| || || || || || ||| |||| ||| || ||
Sbjct 2032 TCGGGGTTGTTCTT-TTTGAGGTTCTCTGTGCTAGACCTGTTATAGACCCAACACTT-CC 2089
Query 2208 TAGAGAACA-AGTTAA-CTTAGCAGAATATGCTATGAATTTGCA-TAGAAAAGGTA-TGT 2263
|||||| | || || ||| ||||||| |||||||| | ||| || ||||| |
Sbjct 2090 AAGAGAA-ATGGTGAATCTT-GCAGAATGGGCTATGAAATGGCAGAAG-AAAGG-ACAAC 2145
Query 2264 TGGAGAAAATCATCGACCCG-AAAATCGTGGGAACGATTAGTAAAGGA-TCGTTAAGGAA 2321
| || | |||||||| | | ||| |||| || || | || || ||||||||
Sbjct 2146 TAGATCAGATCATCGATCAGTCGCTTCG-CGGAAATATCAG-ACCCGATTCTTTAAGGAA 2203
Query 2322 ATTCGTGGAGGCTGCAGAAAAATGTTTGGCAGAGTACGGTGTTGATCGACCGGGAATGGG 2381
||| | || | | || ||||||||||| || ||||| |||||| | || |||||
Sbjct 2204 ATTTGCAGAAACAGGTGAGAAATGTTTGGCGGATTACGGAGTTGATAGGCCATCTATGGG 2263
Query 2382 AGATGTGTTGTGGAATCTTGAATATGCTTTGCAGCTTCAAGAAGCA-TCG 2430
|||||||||||||||||||||||| ||| ||||||| ||||||||| |||
Sbjct 2264 AGATGTGTTGTGGAATCTTGAATACGCTCTGCAGCTACAAGAAGCAGTCG 2313
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 95339883235
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5