BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G61480.1
Length=3126
Score E
Sequences producing significant alignments: (Bits) Value
Ahg496307 jgi|Araly1|496307|fgenesh2_kg.8__2123__AT5G61480.1 4724 0.0
Ahg336990 jgi|Araly1|336990|fgenesh1_pg.C_scaffold_1003555 1099 0.0
> Ahg496307 jgi|Araly1|496307|fgenesh2_kg.8__2123__AT5G61480.1
Length=3114
Score = 4724 bits (2558), Expect = 0.0
Identities = 2909/3082 (94%), Gaps = 10/3082 (0%)
Strand=Plus/Plus
Query 45 tctccttcttctacttcctttctttgctttcaattccttAGCTCTCAAGTTTTCACCTCA 104
|||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||||
Sbjct 39 TCTCCTTCTTCTTCTTCCTTTCTTTGCTTTCAATTCTTTAGCCCTCAAGGTTTCACCTCA 98
Query 105 ACTCTTGTCTCTCCTTTCCCTTAAAACATCTCTCTCTGGCCCTCCCTCTGCCTTTCAAGA 164
||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 99 ACTTTTGTCTCTCATTTCCCTCAAAACATCTCTCTCTGGCCCTCCCTCTGCCTTTCAAGA 158
Query 165 CTGGAAAGTCCCCGTTAACGGTCAAAACGACGCCGTTTGGTGTTCTTGGTCCGGTGTAGT 224
||||||||||| ||| | |||||||||| ||||||||||||||||||||||||||||||
Sbjct 159 TTGGAAAGTCCCGGTTGATGGTCAAAACGTCGCCGTTTGGTGTTCTTGGTCCGGTGTAGT 218
Query 225 CTGTGATAATGTAACGGCTCAAGTCATTTCCCTCGACCTCTCTCACCGGAACCTCTCTGG 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 219 CTGTGATAATGTAACGGCTCAAGTCATTTCCCTCGACCTCTCTCACCGGAACCTCTCTGG 278
Query 285 TCGTATTCCTATACAGATTCGTTACTTGTCGAGCTTACTCTACTTAAATCTCAGTGGGAA 344
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 279 TCGTATTCCTATACAGATTCGTTACTTGTCGAGCTTACTCTACTTGAATCTCAGTGGGAA 338
Query 345 TTCTTTGGAAGGTTCGTTTCCAACTTCTATCTTTGATCTCACCAAGCTCACTACCCTCGA 404
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 339 TTCTTTGGAAGGTTCGTTTCCGACTTCTATCTTTGATCTCACCAAGCTCACTACCCTCGA 398
Query 405 CATCAGCCGTAACTCGTTCGACTCGAGTTTTCCTCCCGGAATCTCCAAGCTTAAGTTCTT 464
|||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 399 CATCAGCCATAACTCGTTCGACTCGAGTTTCCCTCCCGGAATCTCCAAGCTCAAGTTCTT 458
Query 465 AAAAGTCTTCAATGCGTTCAGCAACAACTTCGAAGGTCTATTACCTAGTGACGTGTCTCG 524
|||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 459 AAAAGTCTTCAATGCGTTCAGCAACAACTTCGAAGGTCTATTGCCTGGTGACGTGTCTCG 518
Query 525 TCTTCGTTTCTTGGAAGAGCTTAACTTTGGTGGAAGTTACTTTGAAGGAGAGATTCCAGC 584
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||
Sbjct 519 TCTTCGTTTCTTGGAAGAGCTTAACTTTGGTGGGAGTTACTTTGAAGGAGAAATTCCTGC 578
Query 585 AGCTTACGGTGGTTTACAGAGATTGAAGTTTATTCATTTAGCTGGAAATGTCCTCGGAGG 644
|||||| ||||||||||||||||||||||||||||||||||| |||||||| || |||||
Sbjct 579 AGCTTATGGTGGTTTACAGAGATTGAAGTTTATTCATTTAGCCGGAAATGTTCTTGGAGG 638
Query 645 TAAACTACCTCCTAGATTAGGACTCTTAACAGAGCTCCAACACATGGAAATCGGTTATAA 704
| |||||||||| |||||||| |||||| |||||||||||||||| || |||||||||||
Sbjct 639 TGAACTACCTCCGAGATTAGGGCTCTTACCAGAGCTCCAACACATCGAGATCGGTTATAA 698
Query 705 TCACTTCAACGGAAACATACCTTCGGAGTTTGCCTTACTCTCAAATCTCAAGTACTTTGA 764
|||||||| ||||| |||||| ||||||||| | |||||||| |||| |||||||||||
Sbjct 699 TCACTTCACCGGAAGCATACCCTCGGAGTTTTCGTTACTCTCGGATCTTAAGTACTTTGA 758
Query 765 CGTTTCCAATTGCAGCCTCTCTGGTTCTCTGCCTCAAGAACTCGGGAATCTCTCAAACCT 824
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||
Sbjct 759 CGTTTCCAATTGCAGCCTCTCTGGTTCTCTGCCTCAAGAACTCGGAAATCTCACAAAGCT 818
Query 825 AGAGACTTTATTTCTATTCCAAAACGGTTTCACCGGTGAAATCCCAGAGAGTTATAGCAA 884
|||||||| |||| ||| | |||||||||||||| ||||| |||||||||||||||||
Sbjct 819 CGAGACTTTGCTTCTTTTCGATAACGGTTTCACCGGCGAAATTCCAGAGAGTTATAGCAA 878
Query 885 CTTGAAATCCCTCAAGCTT-CTCGATTTTTCGAGTAATCAGCTTTCTGGTAGTATCCCAT 943
||||||| |||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct 879 CTTGAAAGCCCTCAAG-TTACTCGATTTTTCGAGTAATCAACTTTCTGGTAGTATCCCAT 937
Query 944 CAGGCTTCTCGACCTTGAAGAACCTCACATGGCTAAGCTTAATCAGCAATAACCTCTCAG 1003
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 CAGGCTTCTCAAACTTGAAGAACCTCACATGGCTAAGCTTAATCAGCAATAACCTCTCAG 997
Query 1004 GTGAAGTACCTGAAGGAATCGGTGAACTCCCTGAGCTTACTACATTGTTTCTATGGAACA 1063
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 998 GTGAAGTACCTGAAGGAATCGGTGAACTCCCTGAGCTTACTACATTGTCTCTATGGAACA 1057
Query 1064 ATAACTTCACCGGAGTTTTGCCACACAAGCTTGGATCAAACGGTAAACTTGAGACAATGG 1123
||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||||||
Sbjct 1058 ATAACTTTACCGGAGTTTTGCCACAAAAGCTTGGATCAAACGGTAACCTTGTGACAATGG 1117
Query 1124 ACGTCTCTAACAATTCATTCACCGGAACAATCCCTTCTTCTCTCTGCCATGGAAACAAGC 1183
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1118 ACGTCTCCAACAATTCATTCACCGGAACAATCCCTTCTTCTCTCTGCCATGGAAACAAGT 1177
Query 1184 TATACAAACTCATCCTCTTCTCCAACATGTTTGAAGGTGAGCTACCAAAGAGCTTGACTC 1243
||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1178 TATACAAGCTCATCCTCTTCTCCAACATGTTTGAAGGTGAGTTACCAAAGAGCTTGACTC 1237
Query 1244 GTTGCGAATCTCTATGGCGGTTTCGGAGTCAAAACAATCGATTAAACGGCACAATTCCGA 1303
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1238 GTTGCGATTCTCTATGGCGGTTTCGGAGTCAAAACAATCGATTAAACGGCACAATTCCCA 1297
Query 1304 TCGGATTCGGCTCTCTACGTAACCTCACTTTCGTTGATTTAAGCAACAACAGATTCACCG 1363
|||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||| |
Sbjct 1298 CCGGATTCGGCTCTCTACGCAATCTCACTTTCGTCGATTTGAGCAACAACAGATTCACAG 1357
Query 1364 ATCAAATTCCGGCGGATTTCGCCACCGCTCCTGTTCTTCAGTACTTGAATCTCTCAACCA 1423
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||
Sbjct 1358 ATCAAATTCCGGCGGATTTCGCCACCGCACCTGTTCTTCAGTACTTAAATCTCTCCACCA 1417
Query 1424 ATTTCTTCCACAGGAAACT-ACCGGAAAACATATGGAAAGCTCCGAATCTACAGATCTTC 1482
||| ||||||||| ||| | ||| ||||||||||||||||||||||||||||||||||||
Sbjct 1418 ATTCCTTCCACAG-AAAGTTACCAGAAAACATATGGAAAGCTCCGAATCTACAGATCTTC 1476
Query 1483 TCAGCGAGTTTCAGCAATTTGATCGGTGAAATCCCAAATTACGTTGGATGCAAAAGCTTC 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1477 TCAGCGAGTTTCAGCAATTTGATCGGTGAAATCCCAAATTACGTTGGATGCAAAAGCTTC 1536
Query 1543 TACAGGATTGAACTACAAGGAAACTCACTCAACGGAACGATTCCATGGGACATCGGACAT 1602
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1537 TACAGGATTGAGCTACAAGGAAACTCACTCAACGGAACGATTCCATGGGACATCGGACAT 1596
Query 1603 TGCGAGAAGCTTCTCTGTTTGAATCTCAGCCAAAATCATCTCAACGGAATCATTCCATGG 1662
|| ||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1597 TGTGAGAAGCTTCTCTGTTTGAATCTCAGCCAAAATCATCTCTCCGGTATCATTCCATGG 1656
Query 1663 GAGATTTCAACTCTTCCGTCAATCGCCGACGTAGATCTTTCTCATAATCTCTTAACCGGA 1722
|||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1657 GAGATTTCCACTCTTCCGTCGATCGCCGACGTAGATCTTTCTCACAATCTCTTAACCGGA 1716
Query 1723 ACAATCCCTTCCGATTTCGGAAGCTCTAAGACGATCACAACCTTCAACGTTTCGTATAAT 1782
||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1717 ACACTCCCTTCCGATTTCGGAAGCTCCAAGACGATCACAACCTTCAACGTTTCGTATAAT 1776
Query 1783 CAGCTAATCGGTCCGATTCCAAGTGGTTCTTTCGCTCATCTGAATCCGTCGTTCTTCTCC 1842
|||||||||||||| |||||||||||||| | || ||||||||||||||||| ||| ||
Sbjct 1777 CAGCTAATCGGTCCAATTCCAAGTGGTTCGCTAGCGCATCTGAATCCGTCGTTTTTCGCC 1836
Query 1843 TCAAACGAAGGACTCTGTGGAGATCTCGTCGGAAAACCTTGCAATTCTGATAGGTTTAAC 1902
||||||||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||
Sbjct 1837 TCAAACGAAGGTCTCTGCGGAGATGTCGTCGGAAAACCTTGCAATTCCGATAGGTTTAAC 1896
Query 1903 GCCGGAAATGCAGATATAGACGGTCATCATAAAGAGGAACGACCTAAGAAAACAGCCGGA 1962
|||||| || |||| | |||||||||||||| ||||||||||| |||||||| ||||||
Sbjct 1897 GCCGGAGATTCAGACCTCGACGGTCATCATAACGAGGAACGACCGAAGAAAACCGCCGGA 1956
Query 1963 GCTATTGTTTGGATATTGGCGGCGGCGATTGGGGTTGGATTCTTCGTCCTTGTAGCCGCC 2022
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1957 GCTATTGTTTGGATTTTGGCGGCGGCGATTGGGGTTGGATTCTTCGTCCTTGTAGCCGCT 2016
Query 2023 ACTAGATGCTTCCAGAAAAGCTACGGAAACAGAGTCGACGGTGGTGGAAGAAACGGCGGA 2082
||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2017 ACTCGATGTTTCCAGAAAAGCTACGGAAACAGAGTCGACGGTGGTGGAAGAAACGGCGGA 2076
Query 2083 GATATAGGACCGTGGAAGCTAACGGCTTTTCAGAGACTAAACTTCACGGCGGATGATGTG 2142
||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||||
Sbjct 2077 GATATTGGACCGTGGAAGCTAACCGCGTTTCAGAGGCTAAATTTCACGGCGGATGATGTG 2136
Query 2143 GTTGAGTGTCTCTCAAAGACTGATAACATCCTCGGAATGGGATCAACAGGAACAGTGTAC 2202
|| ||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 2137 GTGGAGTGTCTCTCAAGGACAGATAACATCCTCGGAATGGGATCAACCGGAACAGTGTAC 2196
Query 2203 AAAGCAGAGATGCCTAATGGAGAAATAATCGCCGTGAAAAAACTTTGGGGAAAAAACAAA 2262
|| || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 2197 AAGGCGGAGATGCCTAACGGAGAAATAATCGCCGTGAAAAAACTCTGGGGAAAAAACAAA 2256
Query 2263 GAGAACGGCAAAATCCGGCGGCGGAAGAGCGGCGTATTGGCGGAGGTTGATGTTCTAGGG 2322
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2257 GAAAACGGCAAAATCCGGCGGCGGAAGAGCGGCGTATTGGCGGAGGTAGATGTTCTAGGG 2316
Query 2323 AACGTACGTCACCGGAACATCGTTCGTCTCCTTGGATGTTGCACGAATCGAGATTGCACG 2382
|| ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||
Sbjct 2317 AATGTACGTCACCGGAACATTGTTCGTCTCCTTGGATGCTGCTCGAATCGAGATTGTACG 2376
Query 2383 ATGCTTTTATACGAATACATGCCTAATGGAAGCTTAGACGATCTTCTTCACGGTGGGGAT 2442
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2377 ATGCTTCTATACGAATACATGCCTAATGGAAGCTTAGACGATCTTCTTCACGGTGGCGAT 2436
Query 2443 AAGACGATGACCGCGGCGGCGGAATGGACGGCTTTGTATCAGATCGCGATTGGAGTGGCT 2502
||||| |||| ||||||||||||||||||||| |||||||| |||||||| ||| | |||
Sbjct 2437 AAGACAATGAACGCGGCGGCGGAATGGACGGCGTTGTATCAAATCGCGATCGGAATTGCT 2496
Query 2503 CAAGGGATCTGTTATCTCCACCATGATTGTGATCCGGTGATTGTACACCGTGACCTGAAA 2562
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2497 CAAGGGATCTGTTATCTCCACCATGATTGTGATCCGGTGATCGTACACCGTGACCTGAAA 2556
Query 2563 CCTAGCAATATCCTCCTCGACGCCGATTTCGAGGCGCGTGTGGCGGACTTCGGCGTCGCG 2622
||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||
Sbjct 2557 CCTAGCAATATCCTCCTCGACGCTGATTTCGAGGCGCGGGTGGCGGATTTCGGCGTCGCG 2616
Query 2623 AAGCTTATTCAAACCGACGAATCCATGTCCGTCGTCGCCGGTTCGTACGGTTACATTGCA 2682
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2617 AAGCTGATTCAAACCGACGAATCCATGTCCGTCGTCGCCGGATCGTACGGTTACATTGCA 2676
Query 2683 CCAGAATATGCTTACACTTTACAAGTGGATAAAAAGAGTGATATCTATAGCTATGGAGTG 2742
||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2677 CCAGAGTATGCTTACACACTACAAGTGGATAAAAAGAGTGATATCTATAGCTATGGAGTG 2736
Query 2743 ATTTTATTAGAGATAATCACCGGAAAAAGATCGGTGGAACCGGAATTTGGAGAAGGTAAC 2802
|| || ||||| || |||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 2737 ATATTGTTAGAAATTATCACCGGGAAAAGATCGGTGGAACCGGAATTTGGTGAAGGTAAT 2796
Query 2803 AGTATCGTGGATTGGGTTAGATCAAAGTTGAAGACGAAAGAAGATGTAGAAGAAGTTCTA 2862
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2797 AGTATCGTGGATTGGGTTAGATCAAAGTTGAAGACAAAAGAAGATGTAGAAGAAGTTCTA 2856
Query 2863 GACAAAAGCATGGGTAGGTCGTGTAGTCTTATAAGAGAAGAGATGAAACAAATGTTGAGA 2922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2857 GACAAAAGCATGGGTAGGTCGTGTAGTCTTATAAGAGAAGAGATGAAACAAATGTTGAGA 2916
Query 2923 ATTGCGTTGTTGTGTACAAGCCGGAGTCCGACAGACAGACCGCCGATGAGAGATGTGTTG 2982
||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2917 ATTGCATTGTTATGTACAAGCCGGAATCCGACAGACAGACCGCCGATGAGAGATGTGTTG 2976
Query 2983 TTGATTCTTCAAGAGGCAAAGCCAAAGAGGAAGACAGTAGGGGATAATGTGATCGTCGTT 3042
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2977 TTGATTCTTCAAGAGGCAAAGCCAAAGAGGAAGACTGTAGGGGATAATGTGATCGTCGTT 3036
Query 3043 GGTGATGTTAATGATGTCAATTTCGAAGATGTTTGTAGTGTTGATGTTGGTCATGATGTT 3102
||||||||||||||||||||||| |||||||||||||||| || || ||| ||||||
Sbjct 3037 GGTGATGTTAATGATGTCAATTTTGAAGATGTTTGTAGTGGTG--GT-GGT---GATGTT 3090
Query 3103 AAATGTCAAAGGATTGGGGTGT 3124
||||||||||||||||||||||
Sbjct 3091 AAATGTCAAAGGATTGGGGTGT 3112
> Ahg336990 jgi|Araly1|336990|fgenesh1_pg.C_scaffold_1003555
Length=801
Score = 1099 bits (595), Expect = 0.0
Identities = 692/740 (94%), Gaps = 2/740 (0%)
Strand=Plus/Plus
Query 1355 GATTCACCGATCAAATTCCGGCGGATTTCGCCACCGCTCCTGTTCTTCAGTACTTGAATC 1414
||||||| |||||||||||||| |||||||| ||||| ||||||||||||||||| ||||
Sbjct 29 GATTCACAGATCAAATTCCGGCAGATTTCGCTACCGCACCTGTTCTTCAGTACTTAAATC 88
Query 1415 TCTCAACCAATTTCTTCCACAGGAAACTACCGGAAAACATATGGAAAGCTCCGAATCTAC 1474
|||| ||||||| ||||||||| ||| |||||| ||||||||||||||| ||||||||||
Sbjct 89 TCTCTACCAATTCCTTCCACAGCAAATTACCGGCAAACATATGGAAAGCACCGAATCTAC 148
Query 1475 AGATCTTCTCAGCGAGTTTCAGCAATTTGATCGGTGAAATCCCAAATTACGTTGGATGCA 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 149 AGATCTTCTCAGCGAGTTTCAGCAATTTGATCGGTGAAATCCCAAATTACGTTGGTTGCA 208
Query 1535 AAAGCTTCTACAGGATTGAACTACAAGGAAACTCACTCAACGGAACGATTCCATGGGACA 1594
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 209 AAAGCTTCTACAGTATTGAGCTACAAGGAAACTCACTCAACGGAACGATTCCATGGGACA 268
Query 1595 TCGGACATTGCGAGAAGCTTCTCTGTTTGAATCTCAGCCAAAATCATCTCAACGGAATCA 1654
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 269 TCGGACATTGCGAGAAGCTTCTCTGTTTGAATCTCAGTCAAAATCATCTCTCCGGAATCA 328
Query 1655 TTCCATGGGAGATTTCAACTCTTCCGTCAATCGCCGACGTAGATCTTTCTCATAATCTCT 1714
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 329 TTCCATGGGAGATTTCAACGCTTCCGTCAATCGCCGACGTAGATCTTTCTCATAATCTAT 388
Query 1715 TAACCGGAACAATCCCTTCCGATTTCGGAAGCTCTAAGACGATCACAACCTTCAACGTTT 1774
||||||||||||||||||||||||| |||||| | ||||| |||||||||||||||||||
Sbjct 389 TAACCGGAACAATCCCTTCCGATTTTGGAAGCCCCAAGACAATCACAACCTTCAACGTTT 448
Query 1775 CGTATAATCAGCTAATCGGTCC-GATTCCAAGTGGTTCTTTCGCTCATCTGAATCCGTCG 1833
||||||||||||| |||||||| | |||||||| |||| || || |||||||||||||||
Sbjct 449 CGTATAATCAGCTTATCGGTCCAG-TTCCAAGTTGTTCGTTAGCGCATCTGAATCCGTCG 507
Query 1834 TTCTTCTCCTCAAACGAAGGACTCTGTGGAGATCTCGTCGGAAAACCTTGCAATTCTGAT 1893
|| ||| ||||||||||||| ||||| |||||| || |||||||||||||||||||||||
Sbjct 508 TTTTTCGCCTCAAACGAAGGTCTCTGCGGAGATGTCATCGGAAAACCTTGCAATTCTGAT 567
Query 1894 AGGTTTAACGCCGGAAATGCAGATATAGACGGTCATCATAAAGAGGAACGACCTAAGAAA 1953
||||||||| ||||| || ||||| |||||||||||||||| ||||||||||| ||||||
Sbjct 568 AGGTTTAACACCGGAGATTCAGATCTAGACGGTCATCATAACGAGGAACGACCGAAGAAA 627
Query 1954 ACAGCCGGAGCTATTGTTTGGATATTGGCGGCGGCGATTGGGGTTGGATTCTTCGTCCTT 2013
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 628 ACCGCCGGAGCTATTGTTTGGATTTTGGCGGCGGCGATTGGGGTTGGATTCTTCGTCCTT 687
Query 2014 GTAGCCGCCACTAGATGCTTCCAGAAAAGCTACGGAAACAGAGTCGACGGTGGTGGAAGA 2073
|||||||| ||| |||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 688 GTAGCCGCTACTCGATGTTTCCTGAAAAGCTACGGAAACAGAGTCGACGGTGGTGGAAGA 747
Query 2074 AACGGCGGAGATATAGGACC 2093
||||||||||||||||||||
Sbjct 748 AACGGCGGAGATATAGGACC 767
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118079759500
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5