BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G61720.1 Length=1403 Score E Sequences producing significant alignments: (Bits) Value Ahg496339 jgi|Araly1|496339|fgenesh2_kg.8__2155__AT5G61720.1 1917 0.0 Ahg950935 jgi|Araly1|950935|scaffold_802822.1 1882 0.0 > Ahg496339 jgi|Araly1|496339|fgenesh2_kg.8__2155__AT5G61720.1 Length=1327 Score = 1917 bits (1038), Expect = 0.0 Identities = 1159/1218 (95%), Gaps = 6/1218 (0%) Strand=Plus/Plus Query 24 TCGTTTTCCTGTACCTCTTTTAAGAATaaaaaaaaaaaaaaGAAATGGGAAAAATTTCAT 83 |||||| |||||||||| ||||||||| |||||| ||||| |||||||||||||||| | Sbjct 1 TCGTTTCCCTGTACCTC-TTTAAGAAT--AAAAAAGAAAAA-AAATGGGAAAAATTTCGT 56 Query 84 TAGCGATATGTCTAACGTTGCTTGTCACATTAAGCACTGTTTATGAAACACAAGGGACGT 143 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 57 TAGCGGTATGTCTAACGTTGCTTGTCACATTAAGCACTGTTTATGAAACACAAGGGACGT 116 Query 144 TCTCATTACCCCTTTACTTGAAAAATTTCCCCAAACTGGGCAAAGACTATGAGGCTTTCG 203 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 117 TCTCATTACCCCTTTACTTGAAAAATTTCCCCAAAGTGGGCAAAGACTATGAGGCTTTCG 176 Query 204 CAAACAAAGGTATATCGGACTTTTTGGGTGACCTAGAGGGTATGTGTCCTAAAACCGCAG 263 |||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||| Sbjct 177 CAAACAAAGGTATATCGGACTTCTTGGGTGAACTGGAGGGTATGTGTCCTAAAACCGCAG 236 Query 264 AGTTCAAGGATTTCTTTGAAAACTTGAAGGATTACATGGCCTTCTTCAATTCAGCAGCAC 323 |||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||| ||| Sbjct 237 AGTTCAAGGATTTCTTTGAAAAGTTGAAGGATTACATGGCCTCCTTCAATTCGGCATCAC 296 Query 324 CCGGGTCAAAAGACAACCAGTTCGAGATGTTC-GTAAAATCTGAAAAGCTGTTCAAGGCT 382 |||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||| Sbjct 297 CCGGGTCAAAAGACAACCTGTTCGAGATGT-CAGTAAAATCTGAAAAGCTGTTCAAGGCT 355 Query 383 TTGTCTGCTTTCAACAGTAGTAAAGGCGGAACATCAGAGGATTCGTGGAAGCTGGTGGAT 442 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 356 ATGTCTGCTTTCAACAGTAGTAACGGCGGAACATCAGAGGATTCGTGGAAGCTGGTGGAT 415 Query 443 GGATTGTTGTCAATGGGTAAAGGTTTGGTTGAGATGAAGAAGAGCGGTTCGAAGGAGATA 502 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 416 GGCTTGTTGTCAATGGGTAAAGGTTTGGTTGAGATGAAGAAGAGCGGTTCGAAGGAGATA 475 Query 503 ACTTTTGAAGAGAGAAGAGATCTGATCAGTTCTATGGTGAAATGGGCTAGAGCCATCGGT 562 ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 476 ACTTTTGAACAGAGAAGAGATCTGATCAGTTCTATGGTGAAATGGGCTAGAGCTATCGGT 535 Query 563 CTATTCGTGAAGGCGGCCTCTGAAGATAAAGGACAGTCTATTGATCTGGCATCTTTTGGG 622 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 536 CTATTCGTGAAGGCGGCCTCTGAAGATAAAGGACAATCTATTGATCTGGCATCTTTTGGG 595 Query 623 ATTGACTATGACAACAATGTAGAATCCCCTTTTTCAAAAAGAGCTATGTATGAAACACAA 682 || |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct 596 ATCGACTATGACAACCATGTAGAATCCCCTTTTTCAAAAAGAGCTATGTATGAAAAACAA 655 Query 683 GGAACGTTCTCATTACCTCATTACGTGAAGAATACCCCCAAAATGGGCAAAGCCATTGAG 742 ||||||||||||||||| |||||| |||||||| |||||||||||||||||| ||||||| Sbjct 656 GGAACGTTCTCATTACCCCATTACTTGAAGAATGCCCCCAAAATGGGCAAAGACATTGAG 715 Query 743 CCTTTCGCTTACAAAGGTATGTCGGACTTCTTGGGTAGCCTAGAGAGCAAGTGTCCTGCG 802 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 716 CCTTTCGCTTACAATGGTATGTCGGACTTCTTGGGTAGCCTAGAGAGTAAGTGTCCTGCG 775 Query 803 ACACCAGAGTTCAAAGATTTCTTTGTAAAGTTGGAGGACTATATGGCCTGCTTCAAGTTG 862 |||||||||||| | ||||||||||||||| |||||||||| |||||||||||||||||| Sbjct 776 ACACCAGAGTTCCAGGATTTCTTTGTAAAGCTGGAGGACTACATGGCCTGCTTCAAGTTG 835 Query 863 GTATCACCCGAATCAAAATTCGAGATGGCAGTGAAATCGGATAAGCTCTTCACGGCTATG 922 |||||||||||||||||| ||| ||| |||||||||| || |||||||||| ||||||| Sbjct 836 GTATCACCCGAATCAAAAGACGACATGTCAGTGAAATCTGAGAAGCTCTTCAGGGCTATG 895 Query 923 ATTTCATTGGATGGTACTAAAGGCGGATCAGTGGATTCGTGGAGGATGCTTGATGGTATG 982 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 896 ATTTTATTGGATGGTACTAAAGGCGGAACAGTGGATTCGTGGAGGATGCTTGATGGTATG 955 Query 983 TTGTCAATGGGAAAAGTTTTGGTTGATATCAAGAAGAGCGGTTCCAAGGAGATAACTTTT 1042 |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct 956 TTGTCAATGGGAAAAGTTTTGGTTGAGATGAAGAAGAGCGGTTCCAAGGAGATAACTTTT 1015 Query 1043 GAACAGAGAAGAGATCTGATCAGCTCTATGGTGAAATGGGCTAGAGCTATCGGCCTATTC 1102 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 1016 GAACAGAGAAGAGATCTGATCAGTTCTATGGTGAAATGGGCTAGAGCTATCGGTCTATTC 1075 Query 1103 GTGAAGGCGGCCTCTGAGCGTAAAGGAAAATCTATTGATCTAGCACCTTTTGGAATTGAT 1162 |||||| ||||||||| | |||||||||| ||||||||||||||||||||||||||||| Sbjct 1076 GTGAAGACGGCCTCTGGGAATAAAGGAAAACCTATTGATCTAGCACCTTTTGGAATTGAT 1135 Query 1163 TATGAAAACAATGTCGGAAATGGAAAAGGTAACTTTAGAACCGGCCCTGTTCTCATAGAC 1222 ||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| Sbjct 1136 TATGAAAACAATGTCGGAAATGGGAAAGGTAACTATAGAACCGGCCCTGTTCTGATAGAC 1195 Query 1223 GACGGCAGCGAGCTCTAA 1240 |||||||||||||||||| Sbjct 1196 GACGGCAGCGAGCTCTAA 1213 Score = 442 bits (239), Expect = 3e-123 Identities = 434/525 (83%), Gaps = 26/525 (5%) Strand=Plus/Plus Query 671 TATGAAACACAAGGAACGTTCTCATTACCTCATTACGTGAAGAATACCCCCAAAATGGGC 730 |||||||||||||| |||||||||||||| | |||| |||| ||| ||||||| ||||| Sbjct 98 TATGAAACACAAGGGACGTTCTCATTACCCCTTTACTTGAAAAATTTCCCCAAAGTGGGC 157 Query 731 AAAG-CCATTGAGCCTTTCGCTTACAAAGGTATGTCGGACTTCTTGGGTAG-CCTAGAGA 788 |||| | | |||| ||||||| |||||||||| ||||||||||||||| | || ||| Sbjct 158 AAAGACTA-TGAGGCTTTCGCAAACAAAGGTATATCGGACTTCTTGGGT-GAACTGGAGG 215 Query 789 GCAAGTGTCCTGCGACAC-CAGAGTTCAAAGATTTCTTTGTAAAGTTGGAGGACTATATG 847 | | ||||||| || | |||||||||| |||||||||| ||||||| |||| || ||| Sbjct 216 GTATGTGTCCTAAAAC-CGCAGAGTTCAAGGATTTCTTTGAAAAGTTGAAGGATTACATG 274 Query 848 GCCTGCTTCAAGTT-GGTATCACCCGAATC---A-A-AA----TTCGAGATGGCAGTGAA 897 |||| |||||| || || |||||||| || | | || ||||||||| |||| || Sbjct 275 GCCTCCTTCAA-TTCGGCATCACCCGGGTCAAAAGACAACCTGTTCGAGATGTCAGTAAA 333 Query 898 ATCGGATAAGCTCTTCACGGCTATGAT-TTCATTGGATGGTACTAAAGGCGG---ATCAG 953 ||| || ||||| |||| ||||||| | | | || | ||| ||| ||||| ||||| Sbjct 334 ATCTGAAAAGCTGTTCAAGGCTATG-TCTGCTTTCAACAGTAGTAACGGCGGAACATCAG 392 Query 954 TGGATTCGTGGAGGATGCTTGATGG-TATGTTGTCAATGGGAAAAGTTTTGGTTGATATC 1012 ||||||||||| | || | ||||| | ||||||||||||| |||| ||||||||| || Sbjct 393 AGGATTCGTGGAAGCTGGTGGATGGCT-TGTTGTCAATGGGTAAAGGTTTGGTTGAGATG 451 Query 1013 AAGAAGAGCGGTTCCAAGGAGATAACTTTTGAACAGAGAAGAGATCTGATCAGCTCTATG 1072 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 452 AAGAAGAGCGGTTCGAAGGAGATAACTTTTGAACAGAGAAGAGATCTGATCAGTTCTATG 511 Query 1073 GTGAAATGGGCTAGAGCTATCGGCCTATTCGTGAAGGCGGCCTCTGA-GCGTAAAGGAAA 1131 ||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||| | Sbjct 512 GTGAAATGGGCTAGAGCTATCGGTCTATTCGTGAAGGCGGCCTCTGAAGA-TAAAGGACA 570 Query 1132 ATCTATTGATCTAGCACCTTTTGGAATTGATTATGAAAACAATGT 1176 |||||||||||| ||| ||||||| || || ||||| ||| |||| Sbjct 571 ATCTATTGATCTGGCATCTTTTGGGATCGACTATGACAACCATGT 615 Score = 442 bits (239), Expect = 3e-123 Identities = 435/526 (83%), Gaps = 28/526 (5%) Strand=Plus/Plus Query 125 TATGAAACACAAGGGACGTTCTCATTACCCCTTTACTTGAAAAATTTCCCCAAACTGGGC 184 ||||||| |||||| |||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct 644 TATGAAAAACAAGGAACGTTCTCATTACCCCATTACTTGAAGAATGCCCCCAAAATGGGC 703 Query 185 AAAGACTA-TGAGGCTTTCGCAAACAAAGGTATATCGGACTTTTTGGGTGA-CCTAGAGG 242 |||||| | |||| ||||||| |||| ||||| |||||||| |||||| | ||||||| Sbjct 704 AAAGAC-ATTGAGCCTTTCGCTTACAATGGTATGTCGGACTTCTTGGGT-AGCCTAGAGA 761 Query 243 GTATGTGTCCTAAAAC-CGCAGAGTTCAAGGATTTCTTTG-AAAACTTGAAGGATTACAT 300 ||| ||||||| || | |||||||| |||||||||||| ||| | || |||| ||||| Sbjct 762 GTAAGTGTCCTGCGACAC-CAGAGTTCCAGGATTTCTTTGTAAAGC-TGGAGGACTACAT 819 Query 301 GGCCTTCTTCAA-TTCAGCAGCACCCGGGTCAAAAGACAACCAGTTCGAGATGTTCGTAA 359 ||||| |||||| || | | |||||| ||||||||| | || | | | | | | | Sbjct 820 GGCCTGCTTCAAGTT-GGTATCACCCGAATCAAAAGACGA-CA--T-GTCA-G-T-G--A 869 Query 360 AATCTGAAAAGCTGTTCAAGGCTTTGTCTGCT-TTCAACAGTAGTAAAGGCGGAACATCA 418 ||||||| ||||| |||| |||| || | | || | ||| ||||||||| | | || Sbjct 870 AATCTGAGAAGCTCTTCAGGGCTATG-ATTTTATTGGATGGTACTAAAGGCGG-A-A-CA 925 Query 419 GAGGATTCGTGGAAGCTGGTGGATGGAT-TGTTGTCAATGGGTAAAGGTTTGGTTGAGAT 477 | ||||||||||| | || | ||||| | ||||||||||||| |||| |||||||||||| Sbjct 926 GTGGATTCGTGGAGGATGCTTGATGG-TATGTTGTCAATGGGAAAAGTTTTGGTTGAGAT 984 Query 478 GAAGAAGAGCGGTTCGAAGGAGATAACTTTTGAAGAGAGAAGAGATCTGATCAGTTCTAT 537 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 985 GAAGAAGAGCGGTTCCAAGGAGATAACTTTTGAACAGAGAAGAGATCTGATCAGTTCTAT 1044 Query 538 GGTGAAATGGGCTAGAGCCATCGGTCTATTCGTGAAGGCGGCCTCTGAAGA-TAAAGGAC 596 |||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||| Sbjct 1045 GGTGAAATGGGCTAGAGCTATCGGTCTATTCGTGAAGACGGCCTCTGG-GAATAAAGGAA 1103 Query 597 AGTCTATTGATCTGGCATCTTTTGGGATTGACTATGACAACAATGT 642 | |||||||||| ||| ||||||| ||||| ||||| |||||||| Sbjct 1104 AACCTATTGATCTAGCACCTTTTGGAATTGATTATGAAAACAATGT 1149 Score = 130 bits (70), Expect = 3e-29 Identities = 105/120 (88%), Gaps = 10/120 (8%) Strand=Plus/Plus Query 1288 ATATGGAGACAGCCCTGCTTTGTTAAACAGCAGCGTGCTGTAGAACATTTTTGGTTAT-T 1346 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| | Sbjct 1214 ATATGGAGACAGCCCTGCTTTGTTAAACAGCAGCGAGCTGTAGAACATTTTTGGCTATAT 1273 Query 1347 GTAAAAACTA-TAT--TAATCATATTACTAAAATAAAATTATTACAAATCTTAACTCGTT 1403 || |||||| || |||||||||| || || ||| | |||||||||||||||||||| Sbjct 1274 -TATAAACTAATAAACTAATCATATT--TATAA-AAA-T-ATTACAAATCTTAACTCGTT 1327 > Ahg950935 jgi|Araly1|950935|scaffold_802822.1 Length=1216 Score = 1882 bits (1019), Expect = 0.0 Identities = 1141/1200 (95%), Gaps = 8/1200 (1%) Strand=Plus/Plus Query 45 AAGAATaaaaaaaaaaaaaaGAAATGGGAAAAATTTCATTAGCGATATGTCTAACGTTGC 104 |||||| |||||| ||||| |||||||||||||||| |||||| ||||||||||||||| Sbjct 1 AAGAAT--AAAAAAGAAAAA-AAATGGGAAAAATTTCGTTAGCGGTATGTCTAACGTTGC 57 Query 105 TTGTCACATTAAGCACTGTTTATGAAACACAAGGGACGTTCTCATTACCCCTTTACTTGA 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 TTGTCACATTAAGCACTGTTTATGAAACACAAGGGACGTTCTCATTACCCCTTTACTTGA 117 Query 165 AAAATTTCCCCAAACTGGGCAAAGACTATGAGGCTTTCGCAAACAAAGGTATATCGGACT 224 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 118 AAAATTTCCCCAAAGTGGGCAAAGACTATGAGGCTTTCGCAAACAAAGGTATATCGGACT 177 Query 225 TTTTGGGTGACCTAGAGGGTATGTGTCCTAAAACCGCAGAGTTCAAGGATTTCTTTGAAA 284 | |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 178 TCTTGGGTGAACTGGAGGGTATGTGTCCTAAAACCGCAGAGTTCAAGGATTTCTTTGAAA 237 Query 285 ACTTGAAGGATTACATGGCCTTCTTCAATTCAGCAGCACCCGGGTCAAAAGACAACCAGT 344 | ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||||| || Sbjct 238 AGTTGAAGGATTACATGGCCTCCTTCAATTCGGCATCACCCGGGTCAAAAGACAACCTGT 297 Query 345 TCGAGATGTTC-GTAAAATCTGAAAAGCTGTTCAAGGCTTTGTCTGCTTTCAACAGTAGT 403 ||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 298 TCGAGATGT-CAGTAAAATCTGAAAAGCTGTTCAAGGCTATGTCTGCTTTCAACAGTAGT 356 Query 404 AAAGGCGGAACATCAGAGGATTCGTGGAAGCTGGTGGATGGATTGTTGTCAATGGGTAAA 463 || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 357 AACGGCGGAACATCAGAGGATTCGTGGAAGCTGGTGGATGGCTTGTTGTCAATGGGTAAA 416 Query 464 GGTTTGGTTGAGATGAAGAAGAGCGGTTCGAAGGAGATAACTTTTGAAGAGAGAAGAGAT 523 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 417 GGTTTGGTTGAGATGAAGAAGAGCGGTTCGAAGGAGATAACTTTTGAACAGAGAAGAGAT 476 Query 524 CTGATCAGTTCTATGGTGAAATGGGCTAGAGCCATCGGTCTATTCGTGAAGGCGGCCTCT 583 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 477 CTGATCAGTTCTATGGTGAAATGGGCTAGAGCTATCGGTCTATTCGTGAAGGCGGCCTCT 536 Query 584 GAAGATAAAGGACAGTCTATTGATCTGGCATCTTTTGGGATTGACTATGACAACAATGTA 643 |||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 537 GAAGATAAAGGACAATCTATTGATCTGGCATCTTTTGGGATCGACTATGACAACCATGTA 596 Query 644 GAATCCCCTTTTTCAAAAAGAGCTATGTATGAAACACAAGGAACGTTCTCATTACCTCAT 703 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct 597 GAATCCCCTTTTTCAAAAAGAGCTATGTATGAAAAACAAGGAACGTTCTCATTACCCCAT 656 Query 704 TACGTGAAGAATACCCCCAAAATGGGCAAAGCCATTGAGCCTTTCGCTTACAAAGGTATG 763 ||| |||||||| |||||||||||||||||| ||||||||||||||||||||| |||||| Sbjct 657 TACTTGAAGAATGCCCCCAAAATGGGCAAAGACATTGAGCCTTTCGCTTACAATGGTATG 716 Query 764 TCGGACTTCTTGGGTAGCCTAGAGAGCAAGTGTCCTGCGACACCAGAGTTCAAAGATTTC 823 |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| Sbjct 717 TCGGACTTCTTGGGTAGCCTAGAGAGTAAGTGTCCTGCGACACCAGAGTTCCAGGATTTC 776 Query 824 TTTGTAAAGTTGGAGGACTATATGGCCTGCTTCAAGTTGGTATCACCCGAATCAAAATTC 883 ||||||||| |||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct 777 TTTGTAAAGCTGGAGGACTACATGGCCTGCTTCAAGTTGGTATCACCCGAATCAAAAGAC 836 Query 884 GAGATGGCAGTGAAATCGGATAAGCTCTTCACGGCTATGATTTCATTGGATGGTACTAAA 943 || ||| |||||||||| || |||||||||| ||||||||||| |||||||||||||||| Sbjct 837 GACATGTCAGTGAAATCTGAGAAGCTCTTCAGGGCTATGATTTTATTGGATGGTACTAAA 896 Query 944 GGCGGA---TCAGTGGATTCGTGGAGGATGCTTGATGGTATGTTGTCAATGGGAAAAGTT 1000 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 897 GGCGGAACATCAGTGGATTCGTGGAGGATGCTTGATGGTATGTTGTCAATGGGAAAAGTT 956 Query 1001 TTGGTTGATATCAAGAAGAGCGGTTCCAAGGAGATAACTTTTGAACAGAGAAGAGATCTG 1060 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 957 TTGGTTGAGATGAAGAAGAGCGGTTCCAAGGAGATAACTTTTGAACAGAGAAGAGATCTG 1016 Query 1061 ATCAGCTCTATGGTGAAATGGGCTAGAGCTATCGGCCTATTCGTGAAGGCGGCCTCTGAG 1120 ||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||| | Sbjct 1017 ATCAGTTCTATGGTGAAATGGGCTAGAGCTATCGGTCTATTCGTGAAGACGGCCTCTGGG 1076 Query 1121 CGTAAAGGAAAATCTATTGATCTAGCACCTTTTGGAATTGATTATGAAAACAATGTCGGA 1180 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1077 AATAAAGGAAAACCTATTGATCTAGCACCTTTTGGAATTGATTATGAAAACAATGTCGGA 1136 Query 1181 AATGGAAAAGGTAACTTTAGAACCGGCCCTGTTCTCATAGACGACGGCAGCGAGCTCTAA 1240 ||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||| Sbjct 1137 AATGGGAAAGGTAACTATAGAACCGGCCCTGTTCTGATAGACGACGGCAGCGAGCTCTAA 1196 Score = 460 bits (249), Expect = 9e-129 Identities = 438/526 (83%), Gaps = 25/526 (5%) Strand=Plus/Plus Query 125 TATGAAACACAAGGGACGTTCTCATTACCCCTTTACTTGAAAAATTTCCCCAAACTGGGC 184 ||||||| |||||| |||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct 624 TATGAAAAACAAGGAACGTTCTCATTACCCCATTACTTGAAGAATGCCCCCAAAATGGGC 683 Query 185 AAAGACTA-TGAGGCTTTCGCAAACAAAGGTATATCGGACTTTTTGGGTGA-CCTAGAGG 242 |||||| | |||| ||||||| |||| ||||| |||||||| |||||| | ||||||| Sbjct 684 AAAGAC-ATTGAGCCTTTCGCTTACAATGGTATGTCGGACTTCTTGGGT-AGCCTAGAGA 741 Query 243 GTATGTGTCCTAAAAC-CGCAGAGTTCAAGGATTTCTTTG-AAAACTTGAAGGATTACAT 300 ||| ||||||| || | |||||||| |||||||||||| ||| | || |||| ||||| Sbjct 742 GTAAGTGTCCTGCGACAC-CAGAGTTCCAGGATTTCTTTGTAAAGC-TGGAGGACTACAT 799 Query 301 GGCCTTCTTCAA-TTCAGCAGCACCCGGGTCAAAAGACAACCAGTTCGAGATGTTCGTAA 359 ||||| |||||| || | | |||||| ||||||||| | || | | | | | | | Sbjct 800 GGCCTGCTTCAAGTT-GGTATCACCCGAATCAAAAGACGA-CA--T-GTCA-G-T-G--A 849 Query 360 AATCTGAAAAGCTGTTCAAGGCTTTGTCTGCT-TTCAACAGTAGTAAAGGCGGAACATCA 418 ||||||| ||||| |||| |||| || | | || | ||| |||||||||||||||| Sbjct 850 AATCTGAGAAGCTCTTCAGGGCTATG-ATTTTATTGGATGGTACTAAAGGCGGAACATCA 908 Query 419 GAGGATTCGTGGAAGCTGGTGGATGGAT-TGTTGTCAATGGGTAAAGGTTTGGTTGAGAT 477 | ||||||||||| | || | ||||| | ||||||||||||| |||| |||||||||||| Sbjct 909 GTGGATTCGTGGAGGATGCTTGATGG-TATGTTGTCAATGGGAAAAGTTTTGGTTGAGAT 967 Query 478 GAAGAAGAGCGGTTCGAAGGAGATAACTTTTGAAGAGAGAAGAGATCTGATCAGTTCTAT 537 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct 968 GAAGAAGAGCGGTTCCAAGGAGATAACTTTTGAACAGAGAAGAGATCTGATCAGTTCTAT 1027 Query 538 GGTGAAATGGGCTAGAGCCATCGGTCTATTCGTGAAGGCGGCCTCTGAAGA-TAAAGGAC 596 |||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||| Sbjct 1028 GGTGAAATGGGCTAGAGCTATCGGTCTATTCGTGAAGACGGCCTCTGG-GAATAAAGGAA 1086 Query 597 AGTCTATTGATCTGGCATCTTTTGGGATTGACTATGACAACAATGT 642 | |||||||||| ||| ||||||| ||||| ||||| |||||||| Sbjct 1087 AACCTATTGATCTAGCACCTTTTGGAATTGATTATGAAAACAATGT 1132 Score = 442 bits (239), Expect = 3e-123 Identities = 434/525 (83%), Gaps = 26/525 (5%) Strand=Plus/Plus Query 671 TATGAAACACAAGGAACGTTCTCATTACCTCATTACGTGAAGAATACCCCCAAAATGGGC 730 |||||||||||||| |||||||||||||| | |||| |||| ||| ||||||| ||||| Sbjct 78 TATGAAACACAAGGGACGTTCTCATTACCCCTTTACTTGAAAAATTTCCCCAAAGTGGGC 137 Query 731 AAAG-CCATTGAGCCTTTCGCTTACAAAGGTATGTCGGACTTCTTGGGTAG-CCTAGAGA 788 |||| | | |||| ||||||| |||||||||| ||||||||||||||| | || ||| Sbjct 138 AAAGACTA-TGAGGCTTTCGCAAACAAAGGTATATCGGACTTCTTGGGT-GAACTGGAGG 195 Query 789 GCAAGTGTCCTGCGACAC-CAGAGTTCAAAGATTTCTTTGTAAAGTTGGAGGACTATATG 847 | | ||||||| || | |||||||||| |||||||||| ||||||| |||| || ||| Sbjct 196 GTATGTGTCCTAAAAC-CGCAGAGTTCAAGGATTTCTTTGAAAAGTTGAAGGATTACATG 254 Query 848 GCCTGCTTCAAGTT-GGTATCACCCGAATC---A-A-AA----TTCGAGATGGCAGTGAA 897 |||| |||||| || || |||||||| || | | || ||||||||| |||| || Sbjct 255 GCCTCCTTCAA-TTCGGCATCACCCGGGTCAAAAGACAACCTGTTCGAGATGTCAGTAAA 313 Query 898 ATCGGATAAGCTCTTCACGGCTATGAT-TTCATTGGATGGTACTAAAGGCGG---ATCAG 953 ||| || ||||| |||| ||||||| | | | || | ||| ||| ||||| ||||| Sbjct 314 ATCTGAAAAGCTGTTCAAGGCTATG-TCTGCTTTCAACAGTAGTAACGGCGGAACATCAG 372 Query 954 TGGATTCGTGGAGGATGCTTGATGG-TATGTTGTCAATGGGAAAAGTTTTGGTTGATATC 1012 ||||||||||| | || | ||||| | ||||||||||||| |||| ||||||||| || Sbjct 373 AGGATTCGTGGAAGCTGGTGGATGGCT-TGTTGTCAATGGGTAAAGGTTTGGTTGAGATG 431 Query 1013 AAGAAGAGCGGTTCCAAGGAGATAACTTTTGAACAGAGAAGAGATCTGATCAGCTCTATG 1072 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 432 AAGAAGAGCGGTTCGAAGGAGATAACTTTTGAACAGAGAAGAGATCTGATCAGTTCTATG 491 Query 1073 GTGAAATGGGCTAGAGCTATCGGCCTATTCGTGAAGGCGGCCTCTGA-GCGTAAAGGAAA 1131 ||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||| | Sbjct 492 GTGAAATGGGCTAGAGCTATCGGTCTATTCGTGAAGGCGGCCTCTGAAGA-TAAAGGACA 550 Query 1132 ATCTATTGATCTAGCACCTTTTGGAATTGATTATGAAAACAATGT 1176 |||||||||||| ||| ||||||| || || ||||| ||| |||| Sbjct 551 ATCTATTGATCTGGCATCTTTTGGGATCGACTATGACAACCATGT 595 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 52450267365 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5