BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G61730.1
Length=2823
Score E
Sequences producing significant alignments: (Bits) Value
Ahg917927 jgi|Araly1|917927|Al_scaffold_0008_2678 2362 0.0
Ahg496336 jgi|Araly1|496336|fgenesh2_kg.8__2152__AT5G61690.1 1746 0.0
Ahg485135 jgi|Araly1|485135|fgenesh2_kg.5__1127__AT3G47730.1 920 0.0
Ahg358375 jgi|Araly1|358375|fgenesh1_pg.C_scaffold_8002162 817 0.0
> Ahg917927 jgi|Araly1|917927|Al_scaffold_0008_2678
Length=2865
Score = 2362 bits (1279), Expect = 0.0
Identities = 1376/1424 (97%), Gaps = 2/1424 (0%)
Strand=Plus/Plus
Query 1 ATGACTCTGCGAGAAGGCTTGCCGCTTTTTCATCAGCAATTCACAGCTTTGTTCAAGAAG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGACTCTGCGAGAAGGCTTGCCGCTTTTTCATCAGCAATTCACAGCTTTGTTCAAGAAG 60
Query 61 AATCTACTGCTTTCATGGAGGAACAAGAGAGCCACGTGtcttcatctcttctcttcgttc 120
|||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||
Sbjct 61 AATCTACTGCTTTCATGGCGAAACAAGACAGCCACGTGTCTTCATCTCTTCTCTTCGTTC 120
Query 121 ttcttcatccttctcatcttctctATAGAGGAATCTTCCAAAGCGAGCGACTTAACCTCG 180
||||||||||| |||||||||||||| ||||||||| ||||||||||||| |||||||||
Sbjct 121 TTCTTCATCCTCCTCATCTTCTCTATCGAGGAATCTACCAAAGCGAGCGAGTTAACCTCG 180
Query 181 ACTAGGCACAAG-AATGTCACAGATCCTAAAGCATTAGTCTCTCTTCCGATTCTTCCATG 239
|||| |||| || ||||||||||||||||||||||||||||||||||| |||| |||||
Sbjct 181 ACTACGCAC-AGAAATGTCACAGATCCTAAAGCATTAGTCTCTCTTCCAATTCCGCCATG 239
Query 240 TGAGGATAAGTTTTTCGTGAGACTTCCATGTTTTGACTTCGTGTGGAGTGGCAACCAGAG 299
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 240 TGAGGATAAGTTTTTCGTGAGACTTCCATGTTTTGACTTCGTGTGGAGTGGGAACCAGAG 299
Query 300 CCGTCGTGTCACTGACATTGTCTCTGCAATTATGGCTAACAATCCTGGACGACCAATTCC 359
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 300 CCGTCGTGTGACTGACATTGTCTCTGCAATTATGGCTAACAATCCAGGACGACCAATTCC 359
Query 360 AACCAATAAGGTTCAATCATTTACAAAGCCTGAGGAAGTAGATGCATGGTTTATGTCACA 419
| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 360 GAGCAATAAGGTTCAATCATTTAAAAAGCCTGAGGAAGTAGATGCATGGTTTATGTCACA 419
Query 420 TCCATCGCAAGTAACAGGGGCTTTGCATTTTGTGGAAAAGAATGCTACAGTGATCAGCTA 479
||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 420 TCCATTGCAAGTACCAGGAGCTTTGCATTTTGTGGAAAAGAATGCTACAGTGATAAGCTA 479
Query 480 TGGAATTCAAACAAACTCTTCATCGGAGAAAAAACGTGGTCGGCGTGAAGATCCTACGTT 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 TGGAATTCAAACAAACTCTTCATCGGAGAAAAAACGTGGTCGGCGTGAAGATCCTACGTT 539
Query 540 TAAGTTCCTTGTTCCTCTTCAAATTGCTGCAGAGCGTGAAATCGCAAGGTCTTTAATTGG 599
|||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||||
Sbjct 540 TAAGTTCCTTGTTCCTCTTCAAATCGCTGCAGAGCGCGAAATAGCAAGGTCTTTAATTGG 599
Query 600 AGATCCAAAGTTTAGTTGGGATTTTGGATTTAAGGAATTTGCGCGTCCAGCGATTGGTGG 659
|||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||
Sbjct 600 AGATCCAAAGTTTAGTTGGGGTTCTGGATTTAAGGAATTTGCGCGTCCGGGGATTGGTGG 659
Query 660 TGAAGTGATCATTTCTGCATTTTATCTTATGGGACCAGTGTTCTTTCTTGCTTTCTCCAT 719
|| ||| | || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 TGTAGTAACCACTTCTGCATTTTATCTTATGGGACCAGTGTTCTTTCTTGCTTTCTCCAT 719
Query 720 GTTTGGTTTTGTTCTCCAACTCGGGTCTGTGGTTACCGAGAAAGAGCTAAAACTTCGCGA 779
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 720 GTTTGGTTTTGTTCTCCAACTCGGTTCTGTGGTTACCGAGAAAGAGCTAAAACTTCGCGA 779
Query 780 GGCAATGACAACGATGGGTGTTTATGAATCTGCATATTGGTTGTCATGGCTCATATGGGA 839
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 780 GGCAATGACAACGATGGGTGTTTATGATTCTGCATATTGGTTGTCATGGCTCTTATGGGA 839
Query 840 AGGAATCCTTACCTTTGTCTCCTCACTCTTCTTGGTCCTCTTTGGAATGATgttccagtt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 840 AGGAATCCTTACCTTTGTCTCCTCACTCTTCTTGGTCCTCTTTGGAATGATGTTCCAGTT 899
Query 900 tgagtttttcttgaagaacagttttgttcttgtcttcctacttttctttctttttcagtt 959
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 TGATTTTTTCTTGAAGAACAGTTTTGTTCTTGTCTTCCTACTTTTCTTTCTTTTTCAGTT 959
Query 960 tAATATGATTGGCCTAGCATTCGCGCTATCATCTATCATTAGCAAATCATCTTCGGCAAC 1019
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 960 TAATATGATTGGCCTAGCATTCGCGCTATCCTCTATCATTAGCAAATCATCTTCGGCAAC 1019
Query 1020 AACTGTTGGTTTCCTTGTGTTTCTGGTTGGTTTTATAACACAGATTGTAACAACTGCTGG 1079
|||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1020 AACTGTTGGTTTCCTTGTGTTTCTGGTTGGTTTTATAACACAGATTGTAACAGCTACTGG 1079
Query 1080 ATTCCCTTATTCAAGCGCATATTCGATTGGTAGCCGTGTCATTTGGTCACTCTTTCCACC 1139
|||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1080 ATTCCCTTATTCGAGCTCATATTCGATTGGTAGCCGTGTGATTTGGTCACTCTTTCCACC 1139
Query 1140 GAATACCTTTTCTGCGGGTCTGCAGCTGCTTCTTGAAGCGACATCATCTCCCGGAGACTC 1199
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1140 GAATACCTTTTCTGCGGGTCTGCAGCTGCTTCTTGAGGCGACATCATCTCCCGGAGATTC 1199
Query 1200 TGGAATCAGTTGGAGTGAAAGAGCAATATGTGCAGGGGGCGAGAGCACTTGCGTTATTAC 1259
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1200 TGGAATTAGTTGGAGTGAAAGAGCAATATGTGCAGGGGGCGAGAGCACTTGCATTATTAC 1259
Query 1260 AACTAATAAAATCTACATATGGCTCGTGGGAACGTTCTTTTTCTGGTTTGTATTGGCTCT 1319
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 AACTAATAAAATCTACATATGGCTCGTGGGAACGTTCTTTTTCTGGTTTGTATTGGCTCT 1319
Query 1320 CTACTTTGACAACATCATCCCCAATGCATCCGGTGTGAGAAAATCGATCTTCTACTTTCT 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1320 CTACTTTGACAACATCATCCCCAATGCATCCGGTGTGAGAAAATCGATCTTCTACTTTCT 1379
Query 1380 AAAACCTAGTTATTGGACTGGCAAAGAAGGCAACAAAGTGGAAG 1423
||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1380 AAAACCTAGTTATTGGACTGGCAAAGAAGGCAACAAAGTGGAAG 1423
Score = 2213 bits (1198), Expect = 0.0
Identities = 1345/1415 (95%), Gaps = 14/1415 (1%)
Strand=Plus/Plus
Query 1422 AGTTCCACCA-GTAGAGCATATTACACCAGAGGACGAAGATGTGCTTGAAGAGGAGATTT 1480
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1452 AGTTCCA-CATGTAGAGCATATTACACCAGAGGACGAAGATGTGCTTGAAGAGGAGATTT 1510
Query 1481 TAGTTAAACAACAAGCAATGGATGGAAGAGTTGATCCTAACATTGCAGTTCAGATACATG 1540
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1511 TAGTTAAACAACAAGCAATGGATGGAATAGTTGATCCTAACATTGCAGTTCAGATACATG 1570
Query 1541 GTCTTGCAAAGACATATCCTGGAACAACAAAGCTTGGATGCTGCAAATGCACCAAAACTT 1600
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1571 GTCTTGCAAAGACATATCCTGGGACTACAAAGCTTGGATGCTGCAAATGCACCAAAACTT 1630
Query 1601 CGCCTTTTCATGCTGTAAAGGGTTTGTGGATGAATATTGCCAAAGATCAGTTGTTTTGTC 1660
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1631 CGCCTTTTCATGCTGTAAAGGGTTTGTGGCTGAATATTGCCAAAGATCAGTTGTTTTGTC 1690
Query 1661 TTCTCGGACCTAATGGCGCAGGGAAAACAACTACTATTAGTTGTTTGACTGGCATAAATC 1720
|||| ||||| |||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 1691 TTCTTGGACCCAATGGCGCTGGGAAAACAACTACGATTAGTTGTTTGACTGGCATAAATC 1750
Query 1721 CAGTCACTGGTGGGGATGCAAAAATCTATGGAAATTCCATAAGAAGCTCTGTTGGTATGT 1780
||||||||||||||||||||| ||| || |||||||||||||||||||||||||||||||
Sbjct 1751 CAGTCACTGGTGGGGATGCAATAATTTACGGAAATTCCATAAGAAGCTCTGTTGGTATGT 1810
Query 1781 CCAACATTCGTAAAATGATAGGAGTTTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGT 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1811 CCAACATTCGTAAAATGATAGGAGTTTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGT 1870
Query 1841 CTAGTGAAGAGCACCTCCACCTCTTTGCTAGCATCAAAGGGTTGCCACCATCATCGATCA 1900
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 1871 CTAGTGAAGAGCACCTCCACCTCTTTGCTAGCATCAAAGGGTTACCACCAGCATCGATCA 1930
Query 1901 AATCGATTGCAGAGAAGTTACTGGTAGATGTGAAGCTAACAGGATCGGCGAAAATTAGAG 1960
|||||||||||| |||||||||| |||||| ||||||| || | |||||||||||||||
Sbjct 1931 AATCGATTGCAGTCAAGTTACTGGCAGATGTAAAGCTAATAGAAGCGGCGAAAATTAGAG 1990
Query 1961 CAGGAAGTTACAGTGGTGGAATGAAACGTCGGCTGAGTGTTGCAATAGCACTCATTGGTG 2020
||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||
Sbjct 1991 CAGGAAGTTACAGTGGTGGAATGAAACGTCGACTAAGCGTTGCAATAGCACTCATTGGTG 2050
Query 2021 ATCCCAAGCTGGTTTTTCTAGATGAACCGACTACTGGCATGGACCCTATCACGAGGAGAC 2080
||||||||||||||||||||||||||||||| || || ||||||||||||||||| ||||
Sbjct 2051 ATCCCAAGCTGGTTTTTCTAGATGAACCGACAACGGGTATGGACCCTATCACGAGAAGAC 2110
Query 2081 ATGTGTGGGACATTATACAAGAGTCAAAGAAAGGTCGTGCCATCATACTAACGACGCATT 2140
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 2111 ATGTGTGGGACATTATACAAGAATCAAAGAAAGGTCGTGCAATCATACTAACGACGCATT 2170
Query 2141 CTATGGAGGAAGCTGATATTTTAAGTGATCGAATAGGGATCATGGCTAAAGGCAGGCTCC 2200
||||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 2171 CTATGGAAGAAGCTGATATTTTAGGTGACCGAATAGGGATCATGGCTAAAGGCAGGCTCC 2230
Query 2201 GCTGCATTGGAACCTCAATCAGGTTAAAATCTCGCTTTGGCACGGGATTTGTTGCTACCG 2260
|||||||||||||||||||||||||||||||||||||||| ||||| ||| || |||| |
Sbjct 2231 GCTGCATTGGAACCTCAATCAGGTTAAAATCTCGCTTTGGAACGGGTTTTATTACTACGG 2290
Query 2261 TTAGCTTCATCGAAAACAAAAAAGAC-G-G-T-G-----C---ACCCGAGCCATTGAAAA 2308
|||||||| |||||||||||||||| | | | | | |||||||||||||||||
Sbjct 2291 TTAGCTTCCCCGAAAACAAAAAAGACAGTGCTAGAAGTACTTCACCCGAGCCATTGAAAA 2350
Query 2309 GATTCTTTAAGGAGCGTCTAAAAGTTGAGCCAACAGAAGAAAACAAAGCTTTCATGACTT 2368
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2351 GATTCTTTAAGGAGCATCTAAAAGTTGAGCCAACAGAAGAAAGCAAAGCTTTCATGACTT 2410
Query 2369 TTGTAATCCCACACGACAAAGAGCAACTTTTGAAGGGGTTTTTCGCGGAGCTACAAGATA 2428
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2411 TTGTTATCCCACACGACAAAGAGCAACTTTTGACGGGGTTTTTCGCGGAGCTACAAGATA 2470
Query 2429 GAGAATCTGAATTTGGTATCGCAGACATTCAGCTCGGTCTTGCCACTCTTGAAGAAGTGT 2488
|||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2471 GAGAATCTGAATTTGGCATCTCAGACATTCAGCTCGGTCTTGCCACTCTTGAAGAAGTGT 2530
Query 2489 TTTTGAACATCGCTAGACGTGCTGAACTAGAAAGCGCAACTGTTGAAGGAACTATGGTAA 2548
|||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2531 TTTTGAACATAGCTAGACGTGCTGAACTAGAAAGCGCAACTGTTGAAGGAACCATGGTCA 2590
Query 2549 CTCTCGAGTTAGAATCAGGCATCGCAGTCGAGATACCTGTGGGAGCAAGATTTGTAGGTA 2608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2591 CTCTCGAGTTAGAATCAGGCATCGCAGTCGAGATACCTGTGGGAGCAAGATTTGTAGGTA 2650
Query 2609 TCCCTGGAACAGAAAACGCAGAGAATCCAAGAGGACTAATGGTGGAAGTGTACTGGCAAC 2668
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct 2651 TCCCTGGAACAGAAAACGCAGAGAATCCAAGAGGAATAATGGTGGAAGTGTATTGGCAAC 2710
Query 2669 AAGACGGGTCAGGATCGATGTGCATTTCTGGACACTCGGCGGAGATGCGGATCCCAGAGA 2728
||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||
Sbjct 2711 AAGACGGGTCAGGATCGATGTGCATCTCTGGACACTCGCCGGAGATGCGGATACCAGAGA 2770
Query 2729 ATGTATCGGTGATATATGAACCATCATCACAAGTATTAGGACATGGACAGCGACGAGTTC 2788
|||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2771 ATGTCTCAGTGATATATGAACCATCATCACAAGTATTAGGACATGGGCAGCGACGAGTTC 2830
Query 2789 GGGGTATTGTGATTGATTATGAATCTAACAATTAA 2823
|||||||||||||||||||||||||||||||||||
Sbjct 2831 GGGGTATTGTGATTGATTATGAATCTAACAATTAA 2865
> Ahg496336 jgi|Araly1|496336|fgenesh2_kg.8__2152__AT5G61690.1
Length=2775
Score = 1746 bits (945), Expect = 0.0
Identities = 1339/1522 (88%), Gaps = 56/1522 (4%)
Strand=Plus/Plus
Query 1279 TGGCT-CGTGGGAACGTTCTTTTTCTGGTTTGTAT-TGGCTCTCTACTTTGACAACATCA 1336
||||| | |||| || ||| | ||||||||||| | ||||| ||||||||||||| || |
Sbjct 1237 TGGCTCCTTGGG-ACATTCCTATTCTGGTTTGT-TCTGGCTATCTACTTTGACAATATTA 1294
Query 1337 TCCCCAA-TGCATCCGGTGTGAGAAAATCGATCTTCTACTTTCTAAAACCTAGTTATTGG 1395
| ||||| | | |||||||| |||||| |||||||||||||| || |||| ||||||||
Sbjct 1295 TTCCCAACT-CGTCCGGTGTAAGAAAACCGATCTTCTACTTTTTAGCACCTGGTTATTGG 1353
Query 1396 ACTGGCAAAGAAGGCAACAAAGTGGAAGTTCCACCAGTAGAGCATATTACACCAGAGGAC 1455
|||||||||| ||||||||||||||||||||||| || ||||||| ||| ||||| |||
Sbjct 1354 ACTGGCAAAGGGGGCAACAAAGTGGAAGTTCCACCCGTGGAGCATAATACGCCAGATGAC 1413
Query 1456 GAAGATGTGCTTGAAGAGGAGATTTTAGTTAAACAACAAGCAATGGATGGAAGAGTTGAT 1515
|||||||||||||||| |||| |||||||||||||||||||||||||| |||||||
Sbjct 1414 AAAGATGTGCTTGAAGAAGAGACAGAAGTTAAACAACAAGCAATGGATGGAATAGTTGAT 1473
Query 1516 CCTAACATTGCAGTTCAGATACATGGTCTTGCAAAGACATATCCTGGAACAACAAAGCTT 1575
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1474 CCTAACATTGCAGTTCAGATACATGGTCTTGCAAAGACATATCCTGGGACTACAAAGCTT 1533
Query 1576 GGATGCTGCAAATGCACCAAAACTTCGCCTTTTCATGCTGTAAAGGGTTTGTGGATGAAT 1635
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1534 GGATGCTGCAAATGCACCAAAACTTCGCCTTTTCATGCTGTAAAGGGTTTGTGGATGAAT 1593
Query 1636 ATTGCCAAAGATCAGTTGTTTTGTCTTCTCGGACCTAATGGCGCAGGGAAAA-CAACTAC 1694
||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||
Sbjct 1594 ATTGCCAAAGATCAGTTGTTTTGTCTTCTTGGACCTAATGGCGC-GGGAAAAACAACTAC 1652
Query 1695 TATTAGTTGTTTGACTGGCATAAATCCAGTCACTGGTGGGGATGCAAAAATCTATGGAAA 1754
|||||||||||||||||||||||||||||| |||||||| ||||| || |||||| |
Sbjct 1653 TATTAGTTGTTTGACTGGCATAAATCCAGTTACTGGTGGTGATGCTCTTATATATGGAGA 1712
Query 1755 TTCCATAAGAAGCTCTGTTGGTATGTCCAACATTCGTAAAATGATAGGAGTTTGTCCTCA 1814
||||||||||| || || |||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1713 CTCCATAAGAAGTTCCGTGGGTATGTCTAACATTCGTAAAATGATAGGAGTGTGTCCTCA 1772
Query 1815 GTTTGATATTCTTTGGGATGCTTTGTCTAGTGAAGAGCACCTCCACCTCTTTGCTAGCAT 1874
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1773 GTTTGATATTCTTTGGGATGCTTTGTCTAGTGAAGAACACCTCCACCTCTTTGCTAGCAT 1832
Query 1875 CAAAGGGTTGCCACCATCATCGATCAAATCGATTGCAGAGAAGTTACTGGTAGATGTGAA 1934
|||||| ||||||||| ||||||||||||||| ||| ||||||||||||| ||||| ||
Sbjct 1833 CAAAGGATTGCCACCAGCATCGATCAAATCGACTGCTGAGAAGTTACTGGCGGATGTAAA 1892
Query 1935 GCTAACAGGATCGGCGAAAATTAGAGCAGGAAGTTACAGTGGTGGAATGAAACGTCGGCT 1994
|| |||||| | |||||| |||||||||||||||| |||||||||||||||||||| ||
Sbjct 1893 ACTGACAGGAGCTGCGAAAGTTAGAGCAGGAAGTTATAGTGGTGGAATGAAACGTCGACT 1952
Query 1995 GAGTGTTGCAATAGCACTCATTGGTGATCCCAAGCTGGTTTTTCTAGATGAACCGACTAC 2054
|||||||| ||||||| || ||||||||||||||| | | | ||
Sbjct 1953 CAGTGTTGCGGTAGCACTTATCGGTGATCCCAAGCTG--------A------C--A--AC 1994
Query 2055 TGGCATGGACCCTATCACGAGGAGACATGTGTGGGACATTATACAAGAGTCAAAGAAAGG 2114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1995 TGGCATGGACCCTATCACGAGGAGACATGTGTGGGACATTATACAAGAGTCAAAGAAAGG 2054
Query 2115 TCGTGCCATCATACTAACGACGCATTCTATGGAGGAAGCTGATATTTTAAGTGATCGAAT 2174
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2055 TCGTGCCATCATACTAACGACGCATTCTATGGAAGAAGCTGATATTTTAAGTGATCGAAT 2114
Query 2175 AGGGATCATGGCTAAAGGCAGGCTCCGCTGCATTGGAACCTCAATCAGGTTAAAATCTCG 2234
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 2115 AGGGATCATGGCTAAAGGCAGGCTCCGCTGCATTGGGACCTCAATCAGGTTAAAATCCCG 2174
Query 2235 CTTTGGCACGGGATTTGTTGCTACCGTTAGCTTCATCGAAAACAAAAAAGAC-------- 2286
|||||| || ||||||||||||| ||||||||||||||||| |||||| |||
Sbjct 2175 CTTTGGTACAGGATTTGTTGCTAACGTTAGCTTCATCGAAAGCAAAAATGACAATAACAT 2234
Query 2287 -GGTGC---A-C--C-C--GAGCCATTGAA-AAGATTCTTTAAGGAGCGTCTAAAAGTTG 2335
|||| | | | | ||||||||||| || ||||||||| |||| ||| |||||||
Sbjct 2235 CGGTGTTGGAGCTTCGCACGAGCCATTGAAGAA-ATTCTTTAAAGAGCATCTGAAAGTTG 2293
Query 2336 AGCCAACAGAAGAAAACAAAGCTTTCATGACTTTTGTAATCCCACACGACAAAGAGCAAC 2395
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 2294 AGCCAACAGAAGAAAACAAAGCTTTCATGACTTTTGTTATCCCACACGACAAAGAA-AAC 2352
Query 2396 -TTTTGAAGGGGTTTTTCGCGGAGCTACAAGATAGAGAATCTGAATTTGGTATCGCAGAC 2454
|||||| ||||||||| | |||||||||| | ||||||||||||||||| ||| | |||
Sbjct 2353 CTTTTGACGGGGTTTTTTGAGGAGCTACAAAACAGAGAATCTGAATTTGGAATCTCGGAC 2412
Query 2455 ATTCAGCTCGGTCTTGCCACTCTTGAAGAAGTGTTTTTGAACATCGCTAGAC-GTGCTGA 2513
|| || ||||||||||| |||||||||||||||||| | |||||||| |||| | |||||
Sbjct 2413 ATCCAACTCGGTCTTGCGACTCTTGAAGAAGTGTTTCTCAACATCGCAAGACAG-GCTGA 2471
Query 2514 ACTAGAAAGCGCAACTGTTGAAGGAA-CTATGGTAACTCTCGAGTTAGAATCAGGCATCG 2572
||||||||||||||| | ||||||| | ||||| ||||| |||||| |||||||||||
Sbjct 2472 ACTAGAAAGCGCAACAGCCGAAGGAAAC-ATGGTCACTCTGGAGTTAAAATCAGGCATCT 2530
Query 2573 CAGTCGAGATACCTGTGGGAGCAAGATTTGTAGGTATCCCTGGA-ACAGAAAACGCAGAG 2631
|| | |||||||||||||||||||||||||| || ||||||| | |||||||||||||||
Sbjct 2531 CACTAGAGATACCTGTGGGAGCAAGATTTGTTGGGATCCCTG-ATACAGAAAACGCAGAG 2589
Query 2632 AATCCAAGAGGACTAATGGTGGAAGTGTACTGGCAACAAGACGGGTCAGGATCGATGTGC 2691
|||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2590 AATCCAAGTGGGGTAATGGTGGAAGTGTACTGGCAACAAGACGGGTCGGGATCGATGTGC 2649
Query 2692 ATTTCTGGACACTCGGCGGAGATGCGGATCCCAGAGAATGTATC-GGTGATATATGAACC 2750
|| || |||||||| | ||||||||| | ||| ||||||| || ||||| | | |||
Sbjct 2650 ATCTCAGGACACTCATCAGAGATGCGGGTGCCACAGAATGT-TCCGGTGACACGTCCACC 2708
Query 2751 ATCATCACAAGTATTAGGACAT 2772
||| || | | ||||||||||
Sbjct 2709 ATCGCCAGATGCATTAGGACAT 2730
Score = 1286 bits (696), Expect = 0.0
Identities = 1064/1239 (86%), Gaps = 35/1239 (3%)
Strand=Plus/Plus
Query 1 ATGACTCTGCGAGAAGGCTTGCCGCTTTTTC-ATCAGCAATTCACAGCTTTGTTCAAGAA 59
|||| | ||| |||||||||||||| || || | ||||| ||||| || |||||| |||
Sbjct 1 ATGATTTTGCAAGAAGGCTTGCCGC-TTCTCTACCAGCAGTTCACGGCGTTGTTCGGGAA 59
Query 60 GAATCTACTGCTTTCATGGAGGAACAAGAGAGCCACGTGtcttcatctcttctcttcgtt 119
||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||| ||
Sbjct 60 GAATCTATTGCTTTCATGGCGGAACAAGAGAGCCACGTGTCTTCAACTCTTCTCTTCATT 119
Query 120 cttcttcatccttctcatcttctctATAGAGGAA-TCTTCCAAAGCGAGCGACTTAACCT 178
||||||||||||| ||||||| | |||||||||| | | || || |||||| | |||
Sbjct 120 CTTCTTCATCCTTGTCATCTTTTGTATAGAGGAAGCCAT-GAAGGCAAGCGACGCATCCT 178
Query 179 CGACTAG-GCACAAGAATGTCACAGATCCTAAAGC-ATTAGTCTCTCTTCCGATTCTTCC 236
| || || | |||||||| |||| ||||||| | | ||| || || | |||||||||||
Sbjct 179 CAAC-AGCGTACAAGAATATCACTGATCCTACA-CTATTGGTTTCCCCACCGATTCTTCC 236
Query 237 ATGTGAGGATAAGTT-TTTCGTG-AGACTTCCATGTTTTGACTTCGTGTGGAGTGGCAAC 294
|||||||| ||||| ||| ||| || ||||| || | |||||||||||||||||| |||
Sbjct 237 TTGTGAGGACAAGTTCTTT-GTGAAG-CTTCCTTGCTATGACTTCGTGTGGAGTGGGAAC 294
Query 295 CAGAGCCGTCGTGTCACTGACATTGTCTCTGCAATTATGGCTAACAATCC-TGGACGACC 353
|| || || || || ||||| || |||||||||||||||||||||||||| ||| ||||
Sbjct 295 CATAGTCGCCGCGTTACTGATATCGTCTCTGCAATTATGGCTAACAATCCAGGGA-GACC 353
Query 354 AATTCCAACCAATAAGGTTCAATCATTTACAA--AGCCTGAGGAAGTAGATGCATGGTTT 411
|||||||||||| ||||||||||| || ||| ||||||| || |||||||||||| ||
Sbjct 354 AATTCCAACCAACAAGGTTCAATC-GTT-CAAGGAGCCTGATGAGGTAGATGCATGGCTT 411
Query 412 ATGTCACATCCATCGCAAGTAACAGGGGCTTTGCATTTTGTGGAAAAGAATGCTACAGTG 471
|||||||||| | |||||| |||| ||||||||||||||||||| ||||||| ||||
Sbjct 412 CTGTCACATCCCTTGCAAGTTCCAGGAGCTTTGCATTTTGTGGAAAGGAATGCTTCAGTA 471
Query 472 ATCAGCTATGGAATTCAAACAAACTCTTCATCGGAGAAAAAACGTGGTC-GGCGTGAAGA 530
||||||||||| ||||||||||| ||||| ||||||| ||||||||||| | | ||||||
Sbjct 472 ATCAGCTATGGTATTCAAACAAATTCTTCCTCGGAGAGAAAACGTGGTCAGAC-TGAAGA 530
Query 531 TCCTACGTTTAAGTTCCTTGTTCCTCTTCAAATTGCTGCAGAGCGTGAAATCGCAAGGTC 590
||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 531 TCCTACGTTTAAGTTTCTTGTTCCTCTTCAAGTCGCTGCAGAGCGTGAAATCGCAAGGTC 590
Query 591 TTTAATTGGAGATCCAAAGTTTAGTTGGGATTTTGGATTTAAGGAATTTGCGCGTCCAGC 650
||||||||||||||| | ||| |||||| ||| ||||||||||||||||| || |||||
Sbjct 591 CTTAATTGGAGATCCAGATTTTGGTTGGGGTTTGGGATTTAAGGAATTTGCACGACCAGC 650
Query 651 GATTGGTGGTGAAGTG-ATC-ATTTCTGCA-TTTTATCTTATGGGACCAGTGTTCTTTCT 707
| | | | || || | | | |||||| | | | | ||||||||||||||||| ||
Sbjct 651 TA-T--T-AT-AACTGAAACTACCTCTGCACTCTCA-GTCATGGGACCAGTGTTCTTCCT 704
Query 708 TGCTTTCTCCATGTTTGGTTTTGTTCTCCAACTCGGGTCTGTGGTTACCGAGAAAGAGCT 767
|||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 705 TGCTTTCTCCATGTTTGGTTTTGTTCTCCAACTCGGTTCCCTGGTTACCGAGAAAGAGCT 764
Query 768 AAAACTTC-GCGAGGCAATGACAACGATGGGTGTTTATGAATCTGCATATTGGTTGTCAT 826
||||||| || |||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 765 CAAACTTCGGC-AGGCAATGACAATGATGGGTGTTTATGATTCTGCATATTGGTTGTCAT 823
Query 827 GGCTCATATGGGAAGGAATCCTTACCTTTGTCTCCTCACTCTTCTTGGTCCTCTTTGGAA 886
||||| ||||||||||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct 824 GGCTCTTATGGGAAGGAATCCTTACTTTTGTCTCCTCACTTTTATTGGTCCTCTTTGGAA 883
Query 887 TGATgttccagtttgagtttttcttgaagaacagttttgttcttgtcttcctacttttct 946
|||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 TGATATTCCGGTTTGATTTTTTCTTGAAGAACAGTTTTGTTCTTGTCTTCCTACTTTTCT 943
Query 947 ttctttttcagtttAATATGATTGGCCTAGCATTCGCGCTATCATCTATCATTAGCAAAT 1006
| || ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 944 TGCTCTTTCAGTTTAATATGATTGGCCTAGCATTTGCGCTATCATCTATTATTAGCAAAT 1003
Query 1007 CATCTTCGGCAACAACTGTTGGTTTCCTTGTGTTTCTGGTTGGTTTTATAACACAGATTG 1066
|||||||||||||||| || ||||||||||||||| || |||||||||||||||||||||
Sbjct 1004 CATCTTCGGCAACAACCGTCGGTTTCCTTGTGTTTTTGATTGGTTTTATAACACAGATTG 1063
Query 1067 TAACAACTGCTGGATTCCCTTATTCAAGCGCATATTCGATTGGTAGCCGTGTCATTTGGT 1126
|| || || |||||||||||||||| ||||| ||| || || | | || || || ||||
Sbjct 1064 TATCAGCTACTGGATTCCCTTATTCCAGCGCTTATGCGGTTTCTCGTCGGGTGATGTGGT 1123
Query 1127 CACTCTTTCCACCGAATACCTTTTCTGCGGGTCTGCAGCTGCTTCTTGAAGCGACATCAT 1186
| || |||||||| || || ||||||||||| || |||| |||||||| || || |||
Sbjct 1124 CTCTTTTTCCACCAAACACTTTTTCTGCGGGACTTAAGCTTCTTCTTGATGCAACCTCAA 1183
Query 1187 CTCCCGGA-GACTCTGGAATCAGTTGGAGTGAA-AGAGC 1223
||||| | | ||||||||||||||||||| || |||||
Sbjct 1184 CTCCCAAAAG-CTCTGGAATCAGTTGGAGT-AATAGAGC 1220
> Ahg485135 jgi|Araly1|485135|fgenesh2_kg.5__1127__AT3G47730.1
Length=3133
Score = 920 bits (498), Expect = 0.0
Identities = 731/847 (86%), Gaps = 2/847 (0%)
Strand=Plus/Plus
Query 1422 AGTTCCACCAGTAGAGCATATTACACCAGAGGACGAAGATGTGCTTGAAGAGGAGATTTT 1481
||| ||||| || || || |||| ||||| ||||||||||| ||||||||||| | |||
Sbjct 1450 AGTCCCACCTGTGGATCACGTTACCCCAGATGACGAAGATGTCCTTGAAGAGGAAACTTT 1509
Query 1482 AGTTAAACAACAAGCAATGGATGGAAGAGTTGATCCTAACATTGCAGTTCAGATACATGG 1541
|||||||||||| |||||||||| ||||||||| |||||||||||||| |||| |||
Sbjct 1510 AGTTAAACAACATTCAATGGATGGTTTAGTTGATCCCAACATTGCAGTTCAAATACGTGG 1569
Query 1542 TCTTGCAAAGACATATCCTGGAACAACAAAGCTTGGATGCTGCAAATGCACCAAAACTTC 1601
|||||||||||| |||||||| || || || |||||||||||||||||| |||||| |
Sbjct 1570 TCTTGCAAAGACTTATCCTGGGACGACGAATTTTGGATGCTGCAAATGCAAGAAAACTCC 1629
Query 1602 GCCTTTTCATGCTGTAAAGGGTTTGTGGATGAATATTGCCAAAGATCAGTTGTTTTGTCT 1661
|||||||||||| | ||||| ||||||||||||||||||||||||||||| || |||||
Sbjct 1630 CCCTTTTCATGCTCTGAAGGGGTTGTGGATGAATATTGCCAAAGATCAGTTATTCTGTCT 1689
Query 1662 TCTCGGACCTAATGGCGCAGGGAAAACAACTACTATTAGTTGTTTGACTGGCATAAATCC 1721
||| ||||| ||||||||||| |||||||||||||| | ||||||||| ||| || |||
Sbjct 1690 TCTTGGACCCAATGGCGCAGGAAAAACAACTACTATCAATTGTTTGACAGGCTTATTTCC 1749
Query 1722 AGTCACTGGTGGGGATGCAAAAATCTATGGAAATTCCATAAGAAGCTCTGTTGGTATGTC 1781
||| |||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct 1750 AGTTACTGGTGGTGATGCACTAATTTATGGAAATTCTATAAGAAGCTCTGTTGGTATGTC 1809
Query 1782 CAACATTCGTAAAATGATAGGAGTTTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGTC 1841
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 CAACATCCGTAAAATGATTGGAGTTTGTCCTCAGTTTGATATTCTTTGGGATGCTTTGTC 1869
Query 1842 TAGTGAAGAGCACCTCCACCTCTTTGCTAGCATCAAAGGGTTGCCACCATCATCGATCAA 1901
| ||||||| |||||| | ||||||||||||||||||||||||||||| |||||||||||
Sbjct 1870 TGGTGAAGAACACCTCAAACTCTTTGCTAGCATCAAAGGGTTGCCACCTTCATCGATCAA 1929
Query 1902 ATCGATTGCAGAGAAGTTACTGGTAGATGTGAAGCTAACAGGATC-GGCGAAAATTAGAG 1960
||||| | ||||||| ||| | || || || || |||| | | || |||||| || |
Sbjct 1930 CTCGATGGTTGAGAAGTCACTAGCGGAGGTAAAACTGACAGAAGCAGG-GAAAATCAGGG 1988
Query 1961 CAGGAAGTTACAGTGGTGGAATGAAACGTCGGCTGAGTGTTGCAATAGCACTCATTGGTG 2020
|||||||||||||||| |||||||| || || || ||||||||| | ||||||||||||
Sbjct 1989 CAGGAAGTTACAGTGGAGGAATGAAGCGCCGACTCAGTGTTGCAGTTTCACTCATTGGTG 2048
Query 2021 ATCCCAAGCTGGTTTTTCTAGATGAACCGACTACTGGCATGGACCCTATCACGAGGAGAC 2080
|||| |||||||| || || || ||||||||||| |||||||| || ||||| ||||| |
Sbjct 2049 ATCCAAAGCTGGTCTTCCTGGACGAACCGACTACAGGCATGGATCCGATCACCAGGAGGC 2108
Query 2081 ATGTGTGGGACATTATACAAGAGTCAAAGAAAGGTCGTGCCATCATACTAACGACGCATT 2140
|||||||||| |||||||| || | |||||||| |||||||| ||||||||||| ||||
Sbjct 2109 ATGTGTGGGATATTATACAGGAAACCAAGAAAGGCCGTGCCATTATACTAACGACACATT 2168
Query 2141 CTATGGAGGAAGCTGATATTTTAAGTGATCGAATAGGGATCATGGCTAAAGGCAGGCTCC 2200
| ||||||||||||||||| ||||||||||| |||||||| |||||||| || |||||||
Sbjct 2169 CGATGGAGGAAGCTGATATATTAAGTGATCGGATAGGGATAATGGCTAAGGGTAGGCTCC 2228
Query 2201 GCTGCATTGGAACCTCAATCAGGTTAAAATCTCGCTTTGGCACGGGATTTGTTGCTACCG 2260
|||||||||||||||| ||||| || ||||| ||||||||||| || ||| |||||| |
Sbjct 2229 GCTGCATTGGAACCTCGATCAGATTGAAATCCCGCTTTGGCACAGGTTTTATTGCTAACA 2288
Query 2261 TTAGCTT 2267
| |||||
Sbjct 2289 TCAGCTT 2295
> Ahg358375 jgi|Araly1|358375|fgenesh1_pg.C_scaffold_8002162
Length=507
Score = 817 bits (442), Expect = 0.0
Identities = 480/499 (96%), Gaps = 0/499 (0%)
Strand=Plus/Plus
Query 2325 TCTAAAAGTTGAGCCAACAGAAGAAAACAAAGCTTTCATGACTTTTGTAATCCCACACGA 2384
||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 9 TCTAAAAGTTGAGCCGACAGAAGAAAGCAAAGCTTTCATGACTTTTGTTATCCCACACGA 68
Query 2385 CAAAGAGCAACTTTTGAAGGGGTTTTTCGCGGAGCTACAAGATAGAGAATCTGAATTTGG 2444
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 69 CAAAGAGCAACTTTTGACGGGGTTTTTCGGGGAGCTACAAGATAGAGAATCTGAATTTGG 128
Query 2445 TATCGCAGACATTCAGCTCGGTCTTGCCACTCTTGAAGAAGTGTTTTTGAACATCGCTAG 2504
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 129 CATCTCAGACATTCAGCTCGGTCTTGCCACTCTTGAAGAAGTGTTTTTGAACATAGCTAG 188
Query 2505 ACGTGCTGAACTAGAAAGCGCAACTGTTGAAGGAACTATGGTAACTCTCGAGTTAGAATC 2564
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 189 ACGTGCTGAACTAGAAAGCGCAACTGTTGAAGGAACCATGGTCACTCTCGAGTTAGAATC 248
Query 2565 AGGCATCGCAGTCGAGATACCTGTGGGAGCAAGATTTGTAGGTATCCCTGGAACAGAAAA 2624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 249 AGGCATCGCAGTCGAGATACCTGTGGGAGCAAGATTTGTAGGTATCCCTGGAACAGAAAA 308
Query 2625 CGCAGAGAATCCAAGAGGACTAATGGTGGAAGTGTACTGGCAACAAGACGGGTCAGGATC 2684
||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 309 CGCAGAGAATCCAAGAGGAATAATGGTGGAAGTGTATTGGCAACAAGACGGGTCAGGATC 368
Query 2685 GATGTGCATTTCTGGACACTCGGCGGAGATGCGGATCCCAGAGAATGTATCGGTGATATA 2744
||||||||| |||||||||||| ||||||||||||| ||||||||||| || ||||||||
Sbjct 369 GATGTGCATCTCTGGACACTCGCCGGAGATGCGGATACCAGAGAATGTCTCAGTGATATA 428
Query 2745 TGAACCATCATCACAAGTATTAGGACATGGACAGCGACGAGTTCGGGGTATTGTGATTGA 2804
|||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 429 TGAACCATCATCACAAGTATTAGGACATGGGCAGCGACGAGTTCGGGGAATTGTGATTGA 488
Query 2805 TTATGAATCTAACAATTAA 2823
|||||||||||||||||||
Sbjct 489 TTATGAATCTAACAATTAA 507
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106538415265
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5