BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G61740.1
Length=2547
Score E
Sequences producing significant alignments: (Bits) Value
Ahg496340 jgi|Araly1|496340|fgenesh2_kg.8__2156__AT5G61740.1 3792 0.0
Ahg917925 jgi|Araly1|917925|Al_scaffold_0008_2676 1395 0.0
Ahg485139 jgi|Araly1|485139|fgenesh2_kg.5__1131__AT3G47780.1 955 0.0
Ahg496338 jgi|Araly1|496338|fgenesh2_kg.8__2154__AT5G61700.1 675 0.0
> Ahg496340 jgi|Araly1|496340|fgenesh2_kg.8__2156__AT5G61740.1
Length=2544
Score = 3792 bits (2053), Expect = 0.0
Identities = 2403/2567 (94%), Gaps = 43/2567 (2%)
Strand=Plus/Plus
Query 1 ATGGCGGATCCTAGTC---AAGCCAGTTTCTGGGCGCAAGCAAATGCGTTACTTAGAAAG 57
|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 1 ATGGCGGATCCTAGTCAAGAAGCCAGTTTCTGGGCGCAGGCAAATGCGTTACTTAGAAAG 60
Query 58 AACTTAACCTACCAGGCCGCTGATTTGACTAAGTGTGGAAGTCAAGATGATTTTTCTATT 117
|||||||||||||||||| ||||||||||||| || | |||||||||||||||||||| |
Sbjct 61 AACTTAACCTACCAGGCCTCTGATTTGACTAACTGCGCAAGTCAAGATGATTTTTCTAGT 120
Query 118 GGTGATTGTCCCATCCCAAACCCTCCACTGTTGCCTCCCCTGTTACAGATTCCAGAACCT 177
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 121 GGTGATTGTCCCATCCCAAACCCTCCATTGTTGCCTCCACTGTTACAGATTCCAGAACCT 180
Query 178 GAATCTCGTGCTGTCAGCGGTGGTTTCTTTTCGTAC-AATGACCTTCCTGATAAGTCTTG 236
||||||||||||||||| |||||||||||||| ||| || ||||||||||| ||||| ||
Sbjct 181 GAATCTCGTGCTGTCAGTGGTGGTTTCTTTTCATACGAA-GACCTTCCTGACAAGTCGTG 239
Query 237 TAGAAAAACTGGAACTTGTCCTGTTACTATACTTCTTACTGGGAATAACCATTCCCTTGG 296
||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 240 TAGAAAAACAGGAACTTGTCCTGTTACTATACTTGTAACTGGGAATAACCATTCCCTTGG 299
Query 297 TCAAGCTTTATCTGGGAATATGTTTGGTGGTTCGTTTGCTGTGAATTCCTCTGACCTCTT 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 300 TCAAGCTTTATCTGGGAATATGTTTGGTGGTTCGTTTGCTGTGAATTCCTCTGACCTCTT 359
Query 357 GTCTAGTTTAGCCTATAATGTCTTGGGTTCAACACTAGCACTAGGCACAAACAATTATGC 416
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 360 GTCTAGTTTAGCCTATAATGTCTTGGGTTCAACACTAGCACCAGGCACAAACAATTATGC 419
Query 417 AGATCCCGGGATTGAGTCGGATTTTCCTATCTACAGTATCCAATCTCAGTGCAGTCCAAA 476
|||||| ||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||
Sbjct 420 AGATCCGGGGATTGAGTCTGATATTCCCATCTACAGTATCCAATCTCAGTGCAATCCAAA 479
Query 477 CTCTACATGGCCACTCTCATTTGGAAAAATTCATACAGCGGTG-ACGTGTCTTCAAGGGT 535
||||||||||||||||||||| |||||||||||||||| |||| || ||| || ||||||
Sbjct 480 CTCTACATGGCCACTCTCATTCGGAAAAATTCATACAGTGGTGAAC-TGTGTTAAAGGGT 538
Query 536 TGTCTCTATGGAGAAATAACTCTGTAGAGGTCAATGATGAGCTTTTCAAGGGTAATTGGA 595
||||||| ||| |||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 539 TGTCTCTCTGGCGAAATAACTCTGTAGAGGTCAATGATGAGCTTTTCAAGAGTAGTTGGA 598
Query 596 AGGGAAATCCTGAGAGGATGACAAATGAGATTGCTGCAGCATATGATCTCTTGAATACGG 655
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 AGGGAAATCCTGAGCGGATGACAAATGAGATTGCTGCAGCATATGATCTCTTGAATACGG 658
Query 656 ATAGAAACAACTTCGATGTGACGATCTGGTATAACTCAACAAACATTGATGACCCTTCAA 715
||||||||||||| |||||||| |||||||||||||||||| ||||||| ||||||||||
Sbjct 659 ATAGAAACAACTTTGATGTGACCATCTGGTATAACTCAACATACATTGACGACCCTTCAA 718
Query 716 GGGCACCTTTGGTTCGAGTTCCTCGCTTGCTCAATCTGGTATCAAATGCTTATCTTAAGT 775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 GGGCACCTTTGGTTCGAGTTCCTCGCTTGCTCAATCTGGTATCAAATGCTTATCTTAAGT 778
Query 776 TTCTTAAAGGCCCCGGGACGAGGATATTATTCGAGTTTGTCAAAGAAGTTCCTAAACACC 835
|||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 779 TTCTGAAAGGCCCCAGGACAAGGATATTATTCGAGTTTGTCAAAGAAGTTCCTAAACACC 838
Query 836 AAACTAAATTCAATCTTGATATCGCTTCCATGCTAGGCCCGCtttttttCACTTGGGTTG 895
||||||||| | ||||||||||||||||| |||| |||||||| ||||||||||||||||
Sbjct 839 AAACTAAATACCATCTTGATATCGCTTCCTTGCTTGGCCCGCTCTTTTTCACTTGGGTTG 898
Query 896 TTCTTCTTCTATTCCCCGTGATCTTGACATCATTGGTGTATGAGAAACAAGAGCGCCTAA 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 899 TTCTTCTTCTATTCCCCGTGATCTTGACATCATTGGTGTATGAGAAACAAGAGCGTCTAA 958
Query 956 GAATTATAATGAAAATGCACGGGCTAGGC-ATTGCGATAGGACTCAGGTACTTCCGGCTC 1014
||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||
Sbjct 959 GAATTATAATGAAAATGCACGGGCTAGGCGA-TGTGATAGGACTCAGGTACTTCCGGCTC 1017
Query 1015 AATGACTACAGCGTCCAGTTCATTTTCTATTTTATCTTCGTAAATCTGCAAATCTCCTTC 1074
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1018 AATGACTACAGCATCCAGTTCGTTTTCTATTTTATCTTCGTAAATCTGCAAATCTCCTTC 1077
Query 1075 GCCTTTTTAGCTTCTTCCATATTCTCAAAGGTTAAGACTGCAACAGTTGTTGCTTATACA 1134
|||||||||||||||| | | | | || || | | |||||||||||| |||
Sbjct 1078 GCCTTTTTAGCTTCTT-C--A---T---A--TT----CT-C-A-AGTTGTTGCTTACACA 1119
Query 1135 TTGGTGTTTGCAAGTGGGCTCTTGGGAATG-TTTCTCTTTGGTGAACTGCTTGAATCTCC 1193
|||||||||||||||||||||||||| | | ||||| ||||| ||||||||||| |||||
Sbjct 1120 TTGGTGTTTGCAAGTGGGCTCTTGGGCA-GCTTTCTTTTTGGAGAACTGCTTGATTCTCC 1178
Query 1194 CACATTCCCCGAAAAAGGGATTCTTGCTTTGGAGTTGTATCCCGGCTTTTCCTTATTCCG 1253
| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1179 CTCATTCCCCGAAAAAGGGATTCTTGCTTTGGAGATGTATCCCGGCTTTTCCTTATTCCG 1238
Query 1254 CGGATTGTATGAGTTCGCGCAATATGCCTCCCGGGGAAACGGGATGAAGTGGAAAGATCT 1313
|||||||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||
Sbjct 1239 CGGATTGTATGAGTTCTCGCAATATGCCTTCCGTGGAAGCGGGATGAAGTGGAAAGATCT 1298
Query 1314 CAAGGAAAGCGGAATGGATAAGCTGTTCTACCTCATGTCTGTGGAGTGGTTTGTGATTCT 1373
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1299 CAAGGAAAGCGGAATGGATAAACTGTTCTACCTTATGTCTGTGGAGTGGTTTGTGATTCT 1358
Query 1374 CATTGTGGCCTACTCTATCGATCTTCTTTCTTCATCAGGGAGAAGCCCTTTCG--TT-TT 1430
||||||||||||||||||||||| |||||||||| |||| ||| ||||||| || ||
Sbjct 1359 TATTGTGGCCTACTCTATCGATCTAGTTTCTTCATCCGGGAAAAGTCCTTTCGTTTTCTT 1418
Query 1431 -------C--TTCAAGAAATCATCTTCCCTACCAAGTCCTAGTGTTCAAAGGCAAAACTC 1481
| ||||| ||||||||||||||||||||||||||||| |||| ||||| |||
Sbjct 1419 GAAGAACCATTTCAAAAAATCATCTTCCCTACCAAGTCCTAGTGTGCAAAAGCAAACCTC 1478
Query 1482 TGAAAACGTTCTCATTGACATGGAAAAAACAGATGTCACTCAGGAGCGGGAAAAAGTTGA 1541
||| ||| |||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct 1479 TGACAACATTCTCATTGACATGGAAAAAACAGATGTCACTCAGGAGAGAGAAAAAGTTGA 1538
Query 1542 GAAATTGAGGAAAGAAGGGACCACGGGGCATGCGATCGTGTGTGACAACCTGAAGAAGGT 1601
| || ||||||||||||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct 1539 GCAACTGAGGAAAGAAGGGAGCACAGGGCATGCGATTGTGTGTGACAACCTGAAGAAGGT 1598
Query 1602 GTATCCAGGTAGCGATGGTAACCCGCCAAAGCTAGCAGTAAGAGGGTTATATCTCGACGT 1661
||| || ||||||||||||||||||||||| |||||||||||||||||||| || |||||
Sbjct 1599 GTACCCCGGTAGCGATGGTAACCCGCCAAAACTAGCAGTAAGAGGGTTATACCTTGACGT 1658
Query 1662 GCCTTCAGGAGAATGCTTTGGCATGCTTGGACCTAATGGTGCCGGAAAAACCTCTTTCAT 1721
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1659 TCCTTCAGGGGAATGCTTTGGCATGCTTGGACCTAATGGTGCCGGAAAAACCTCTTTCAT 1718
Query 1722 CAATATGATGACTGGGCTCCTGAAACCAACATCTGGAACTGCGTTGGTTCAAGGTTTGGA 1781
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 1719 CAATATGATGACTGGGCTACTGAAACCGACATCTGGAACTGCGTTGGTTCAAGGTTTGGA 1778
Query 1782 CATATGCAAAGATATGAACAAAGTATATACAAGCATGGGAGTCTGCCCGCAACATGACTT 1841
||||||||| ||||||||||||||||| || |||||||| || |||||||| ||||||||
Sbjct 1779 CATATGCAAGGATATGAACAAAGTATACACGAGCATGGGCGTATGCCCGCAGCATGACTT 1838
Query 1842 GCTCTGGGGGACGCTAACGGGAAGGGAACATCTTCTCTTTTATGGGAGGCTTAAGAATAT 1901
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1839 GCTCTGGGAGACGCTAACGGGAAGGGAACATCTTCTCTTTTATGGGAGGCTTAAGAATAT 1898
Query 1902 CAAGGGCTCTGCTCTAATGCAAGCTGTGGAAGAATCTCTTAAAAGCGTCAGCCTTTTCGA 1961
||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1899 CAAGGGCTCTGCTCTAACACAAGCTGTGGAAGAGTCTCTCAAAAGCGTCAGCCTTTTCGA 1958
Query 1962 TGGAGGAGTTGCCGATAAACCTGCTGGAAAATACAGCGGAGGTATGAAAAGGCGGCTTAG 2021
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1959 TGGAGGAGTTGCTGACAAACCTGCTGGAAAATACAGCGGAGGTATGAAAAGGCGGCTGAG 2018
Query 2022 TGTAGCCATTTCGCTTATCGGGAACCCAAAGGTGGTTTACATGGATGAGCCTAGCACTGG 2081
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 2019 TGTAGCCATTTCACTTATCGGGAACCCAAAGGTGGTTTACATGGATGAGCCGAGCACAGG 2078
Query 2082 ACTTGATCCAGCCTCAAGGAAAG-ATTTATGGACAGTGATCCAGCGTGCAAAACAAAACA 2140
||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||
Sbjct 2079 ACTTGATCCAGCCTCAA-GAAAGAATTTATGGACCGTGATCCAGCGTGCAAAACAAAACA 2137
Query 2141 CAGCCATAATCCTCACAACTCACTCGATGGAGGAAGCAGAGTTTCTTTGCGACCGATTGG 2200
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2138 CAGCCATAATCCTCACAACTCACTCGATGGAAGAAGCAGAGTTTCTTTGCGACCGATTGG 2197
Query 2201 GGATTTTTGTAGACGGAGGCTTGCAATGTGTAGGAAATCCGAAAGAGTTAAAGGGAAGAT 2260
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2198 GGATTTTTGTAGACGGAGGCTTGCAATGTGTAGGAAATCCGAAAGAGTTAAAGGGAAGGT 2257
Query 2261 ATGGGGGATCATATGTCTTCACGATGACGACCTCAGTTGAACACGAGGAGAAAGTAGAGA 2320
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 2258 ATGGGGGATCATATGTCTTCACGATGACGAGCTCAATTGAACACGAGGAGAAAGTAGAGA 2317
Query 2321 GAATGGTTAAACATATTTCACCAAACTCCAAGAGAGTATATCATTTAGCTGGAACACAGA 2380
|||||||| ||| |||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 2318 GAATGGTTCGACACATTTCACCAAACGCCAAGAGAGTATATCATTTAGCGGGAACACAGA 2377
Query 2381 AATTCGAGATCCCTAAGCAAGAAGTCATGATTGCAGATGTGTTTTTCATGGTGGAGAAGG 2440
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2378 AATTCGAGATCCCTAAGCAAGAAGTCATGATTGCAGATGTGTTTTTGATGGTGGAGAAGG 2437
Query 2441 TCAAAAGCAAATTCACAGTTTTTGCTTGGGGACTCGCCGATACAACTCTGGAAGACGTCT 2500
|||||| |||||||||||||| |||||||||||||| || ||||| |||||||||||||
Sbjct 2438 CCAAAAGAAAATTCACAGTTTTCGCTTGGGGACTCGCAGACACAACCCTGGAAGACGTCT 2497
Query 2501 TCTTCAAGGTTGCTACAACTGCTCAAGCCTTCAACTCTTTGTCTTAA 2547
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2498 TCTTCAAGGTTGCTACAACTGCTCAAGCCTTCAACTCTTTGTCTTAA 2544
> Ahg917925 jgi|Araly1|917925|Al_scaffold_0008_2676
Length=2754
Score = 1395 bits (755), Expect = 0.0
Identities = 1330/1601 (83%), Gaps = 65/1601 (4%)
Strand=Plus/Plus
Query 987 TGCGATAGGACTCAGGTACTTCCGGCTCAATGACTACAGCGTCCAGTTCATTTTCTATTT 1046
||| |||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 1179 TGCTATAGGACTCAAGTACTTCCGGCTCAATGACTACAGCATCCAGTTCGTTTTCTATTT 1238
Query 1047 TATCTTCGTAAATCTGCAAATCTCCTTCGCCTTTTTAGCT-TCTTCCATATTCTCAAAGG 1105
||||| | ||||||| ||||||||| |||||||| ||| | ||||| |||||||||||||
Sbjct 1239 TATCTACTTAAATCTACAAATCTCCCTCGCCTTTCTAG-TCTCTTCGATATTCTCAAAGG 1297
Query 1106 TTAAGACTGCAACAGTTGTTGCTTATACATTGGTGTTTGCAAGTGGGCTCTTGGGAATG- 1164
||||||||| |||||| |||||||| | |||||||| | || |||||||||||| | |
Sbjct 1298 TTAAGACTGTAACAGTCGTTGCTTACATATTGGTGTACGGAACTGGGCTCTTGGGTA-GC 1356
Query 1165 TTTCTCTTT-GGTGAACTGCTTGAATCTCCCACATTCCCCGAAAAAGGGATTCTTGCTTT 1223
||||| ||| || || ||||| || ||||||| ||| || |||||||||| |
Sbjct 1357 TTTCT-TTTCCAAAAAATGATTGAAAATCAGTCATTCCCGGAAGAATGGATTCTTGCCAT 1415
Query 1224 GGAGTTGTATCCCGGCTTTTCCT-TATTCCGCGGATTGTATGAGTTCGCGCAATATGCCT 1282
|||||||||||||||||||| || | | |||||| |||||||||||| ||||||||||||
Sbjct 1416 GGAGTTGTATCCCGGCTTTT-CTCTGTACCGCGGGTTGTATGAGTTCTCGCAATATGCCT 1474
Query 1283 CCCGGGGAAACGGGATGAAGTGGAAAGATCTCAAG-GAAAGCGGAATGGAT-AAGCTGTT 1340
||||||||||||||||||||||| ||||||||| | || |||||||||| | ||| | ||
Sbjct 1475 CCCGGGGAAACGGGATGAAGTGGCAAGATCTCA-GTGATAGCGGAATGGGTGAAGTT-TT 1532
Query 1341 CTACCTCATGTCTGTGGAGTGGTTTGT-GATTCTCATTGTGGCCTACTCTATCGATCTTC 1399
|| ||||||| | ||||||||| | | | |||||||| ||||||| ||||||||
Sbjct 1533 CTGTATCATGTCAATAGAGTGGTTTCTTGCT-CTCATTGTAGCCTACTATATCGATCAGG 1591
Query 1400 TTT-CTTCATCAGGGAGAAGC--CCTTTCGTTTTCTT------C------AAGAAATCAT 1444
||| | |||| || | |||| |||||| ||||||| | |||||| | |
Sbjct 1592 TTTTCA-CATCCGG-A-AAGCATCCTTTCTTTTTCTTGGTGAACCCTTTCAAGAAACCTT 1648
Query 1445 CTTCCCTACCAAGT---CCTAGTGTTCAAAGGCAAAACTCTGAAAACGTTCTC-ATTGAC 1500
||||||||||||| |||| ||| |||||| | ||| |||| || ||| || ||
Sbjct 1649 CTTCCCTACCAAGGAGGCCTACTGTGCAAAGGGTGGATTCTAAAAAAGT-CTCCATAGAT 1707
Query 1501 ATGGAAAAAACA-GATGTCACTCAGGAGCGGGAAAAAGTTGAGAAATTGAGGAAAGAAGG 1559
|| |||||| | ||| ||||| ||||| ||||||| ||| | ||||||||||| |||||
Sbjct 1708 ATAGAAAAA-CTTGATATCACTGAGGAGAGGGAAAAGGTTCAAAAATTGAGGAATGAAGG 1766
Query 1560 GACCACGGGGCATGCGATCGTGTGTGACAACCTGAAGAAGGTGTATCCAGGTAGCGATGG 1619
| ||| |||||||||||| |||||||||||||||| ||||| ||||||||||| |||||
Sbjct 1767 TAGCACAGGGCATGCGATCTTGTGTGACAACCTGAAAAAGGTTTATCCAGGTAGAGATGG 1826
Query 1620 TAACCCGCCAAAGCTAGCAGTAAGAGGGTTATATCTC-GACGTGCCTTCAGGAGAATGCT 1678
|||||||||||| | |||||| ||||||| |||||| | ||| ||||||||||||||||
Sbjct 1827 TAACCCGCCAAAAATGGCAGTACGAGGGTTGTATCTCAG-CGTTCCTTCAGGAGAATGCT 1885
Query 1679 TTGGCATGCTTGGACCTAATGGTGCCGGAAAAACCTCTTTCATCAATATGATGACTGGGC 1738
| |||||||||||||||||||||||||| ||||| || ||||||| ||||||||| ||||
Sbjct 1886 TCGGCATGCTTGGACCTAATGGTGCCGGCAAAACTTCCTTCATCAGTATGATGACAGGGC 1945
Query 1739 TCCTGAAACCAACATCTGGAACTGCGTTGGTTCAAGGTTTGGACATATGCAAAGATATGA 1798
|||| ||||| |||||||||| || |||||||| ||||||||||||||||| |||||||
Sbjct 1946 TCCTCAAACCGTCATCTGGAACAGCCTTGGTTCAGGGTTTGGACATATGCAAGGATATGA 2005
Query 1799 ACAAAGTATATACAAGCATGGGAGTCTGCCCGCAACATGACTTGCTCTGGGGGACGCTAA 1858
|||||||||| ||||||||||| || |||||||| ||||||||||| |||| ||||||||
Sbjct 2006 ACAAAGTATACACAAGCATGGGCGTATGCCCGCAGCATGACTTGCTTTGGGAGACGCTAA 2065
Query 1859 CGGGAAGGGAACATCTTCTCTTTTATGGGAGGCTTAAGAATATCAAGGGCTCTGCTCTAA 1918
| ||||||||||||||||||||||| || | ||||| |||||||||||||||| |||||
Sbjct 2066 CAGGAAGGGAACATCTTCTCTTTTACGGTCGACTTAAAAATATCAAGGGCTCTGATCTAA 2125
Query 1919 TGCAAGCTGTGGAAGAATCTCTTAAAAGCGTCAGCCTTTTCGATGGAGGAGTTGCCGATA 1978
|||||||| | ||||||||| ||||| |||||||| |||||||||||||||| ||| |
Sbjct 2126 CACAAGCTGTTGTAGAATCTCTCAAAAGTGTCAGCCTATTCGATGGAGGAGTTGGCGACA 2185
Query 1979 AACCTGCTGGAAAATACAGCGGAGGTATGAAAAGGCGGCTTAGTGTAGCCATTTCGCTTA 2038
|||||||||| || ||||| ||||||||||||||| ||||||| || ||||| |||||||
Sbjct 2186 AACCTGCTGGTAATTACAGTGGAGGTATGAAAAGGAGGCTTAGCGTGGCCATATCGCTTA 2245
Query 2039 TCGGGAACCCAAAGGTGGTTTACATGGATGAGCCTAGCACTGGACTTGATCCAGCCTCAA 2098
|||||||||| ||||||||||| | |||||||| ||||| ||||||||||||||||| |
Sbjct 2246 TCGGGAACCCCAAGGTGGTTTATTTAGATGAGCCAAGCACAGGACTTGATCCAGCCTCGA 2305
Query 2099 GGAAAGA-TTTATGGACA-GTGATCCAGCGTGCAAAACAAAACACAGCCATAATCCTCAC 2156
|||| || |||||||| | |||||| |||||||||||||||||||||| ||||| |||||
Sbjct 2306 GGAA-GAATTTATGGA-ATGTGATCAAGCGTGCAAAACAAAACACAGCAATAATTCTCAC 2363
Query 2157 AACTCACTCGATGGAGGAAGCAGAGTTTCTTTGCGACCGATTGGGGATTTTTGTAGACGG 2216
||||||||||||||| ||||| || ||||| ||||| ||||||| ||||||||||||||
Sbjct 2364 AACTCACTCGATGGAAGAAGCCGAATTTCTATGCGATAGATTGGGAATTTTTGTAGACGG 2423
Query 2217 AGGCTTGCAATGTGTAGGAAA-TCCGAAAGAGTTAAAGGGAAGATATGGGGGATCATATG 2275
|||||||||||| ||||||| || || || | ||| | ||||| || ||||||||||
Sbjct 2424 AGGCTTGCAATGCATAGGAAACTCT-AAGGAACTGAAGAGCAGATACGGTGGATCATATG 2482
Query 2276 TCTTCACGATGACGACCTCAGTTGAA--CACGAGGAGAAAG-TAGAGAGAATGGTTAAA- 2331
||||||||||||| || || || || || ||||| | || |||||||| ||||| ||
Sbjct 2483 TCTTCACGATGACAACATC--TTCAAATCATGAGGA-AGAGGTAGAGAGATTGGTTGAAT 2539
Query 2332 CATATTTCACCAAACTCCAAGA-GAGTATATCAT-TTAGCTGGAACACAGAAATTCGAGA 2389
| ||| || || ||| |||||| || ||||||| || ||||| || ||||||||||||
Sbjct 2540 C-TATCTCTCCCAACGCCAAGAAGA-TATATCACCTT-GCTGGTACTCAGAAATTCGAGC 2596
Query 2390 TCCCTAAGCAAGAAGT-CATGATTGCAGATGTGTTTTTCA-TGGTGGAGAAGGTCAAAAG 2447
|||| |||||||| || | |||||| || |||||| | || || | |||| ||||
Sbjct 2597 TCCCAAAGCAAGAGGTTCG-GATTGCTGAGGTGTTTCGCGCTGTTGAA-AAGGCCAAAT- 2653
Query 2448 CAAA-TTCACAGTTTTTGCTTGGGGACTCGCCGATACAACTCTGGAAGACGTCTTCTTCA 2506
|| |||||||| ||||| ||||||||||| || |||||||| ||||| |||||| |||
Sbjct 2654 CATCCTTCACAGTCTTTGCCTGGGGACTCGCGGACACAACTCTCGAAGATGTCTTCATCA 2713
Query 2507 AGGTTGCTACAACTGCTCAAGCCTTCAACTCTTTGTCTTAA 2547
| ||||||| ||||||||||||||||| || |||||||||
Sbjct 2714 AAGTTGCTAGAACTGCTCAAGCCTTCATTTCCTTGTCTTAA 2754
Score = 749 bits (405), Expect = 0.0
Identities = 761/930 (82%), Gaps = 35/930 (4%)
Strand=Plus/Plus
Query 77 CTGATTTGACTAAGTGTGGAAGTCAA-GATGA-TTTTTCTATTGGTGAT-TGTCCCATCC 133
||||| || |||| ||||| || ||| | | | ||| || |||| || ||||||||||
Sbjct 179 CTGATATGTCTAATTGTGG-AGGCAACG-TTACTTTGCCTGGTGGT-ATCTGTCCCATCC 235
Query 134 CAAACCCTCCACTGTTGCCTCCCCTGTTACAGATTCCAGAACCTGAATCT-CGTGCTG-T 191
|||||||||||| ||||||||| |||| ||||||||| ||| |||| || ||| | | |
Sbjct 236 CAAACCCTCCACCGTTGCCTCCGATGTTGCAGATTCCACAACATGAA-CTCCGTTCCGTT 294
Query 192 CAGCGGTGGTTTCTTTTCGTACAATGACCTTCCTGATAAGTCTTGTAGAAAAACTGGAAC 251
|| | ||||||||| ||||| || || ||||| ||||| || ||| ||| ||| |
Sbjct 295 AAG-ACCGATTTCTTTTCCTACAAAGATCTCCCTGACAAGTCATGCAGAGGAACAGGATC 353
Query 252 TTGTCCTGTTACTATACTTCTTACTGG-GAATAACCAT-TCCCTTGGTCAAGCTTTATCT 309
||||||||| || |||||| | ||||| | |||| | | | ||||| ||||||||||
Sbjct 354 TTGTCCTGTAACGATACTTATCACTGGTG-ATAAAC-TGGCTCTTGGAAAAGCTTTATCC 411
Query 310 GGGAATATGTTTGGTGGTTCGTTTGCT-GTGAATTCCTCTGACCTCTTGTCTAGTTTAGC 368
| ||||| || | ||| |||| | || |||||||| ||||||||| ||| ||||||
Sbjct 412 GCAAATATCTTCAGCACTTCTTTTG-TGGTTAATTCCTCCGACCTCTTGCCTACTTTAGC 470
Query 369 CTATAATGTCTTGGGTTCAACACTAGCA-CTAGGCACAAACAATTATGCAGATCCC-GGG 426
| |||| ||||||||||||||| |||| | || | | ||||||||| ||| ||| |||
Sbjct 471 CAATAACGTCTTGGGTTCAACAGAAGCAGCGGGGGA-AGACAATTATGAAGA-CCCGGGG 528
Query 427 ATTGAGTCGGATTTTCCTATCTACAGTATCCAATC-TCAGTGCAGTCCAAACTCTACATG 485
|||| || ||| | ||||| |||||||||||| | || |||||| |||||||||||||
Sbjct 529 ATTGCCTCAGATCTCCCTATTTACAGTATCCAACCTTC-TTGCAGTGCAAACTCTACATG 587
Query 486 GCCACTCTCATTTGGAAAAATTCATACAGCGGTGACGTGTCTTCAAGGGTTGTCTCTATG 545
||||||||| | ||| ||||||| |||||||||| |||| |||||||||||| ||| ||
Sbjct 588 GCCACTCTCGCTCGGACAAATTCAGACAGCGGTGAAGTGTGTTCAAGGGTTGTGTCTCTG 647
Query 546 GAGAAATAACTCTGTAGAGGTCAATGATGAGCTTTTCAAGGGTAATTGGAAGGGAAATCC 605
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||
Sbjct 648 GAGAAATAACTCTGTAGAGGTCAATGATGAGCTTTTCAAGGGTAGTTGGAGGGGAAACCC 707
Query 606 TGAGAGGATGACAAATGAGATTGCTGCAGCATATGATCTCTTGAATACGGATAG-AAACA 664
|| | |||||||||||||||| | ||||||||| |||||| ||| |||||||| ||| |
Sbjct 708 TGCGGGGATGACAAATGAGATCGTTGCAGCATACGATCTCATGAGCACGGATAGGAAA-A 766
Query 665 ACTTCGATGTGACGATCTGGTATAACTCAACAAACATTGATGACCCTTCAAG-GG-CA-C 721
| ||| ||||||| || |||||||||||||| ||| |||||| ||||| || || |
Sbjct 767 ATTTCAATGTGACCATATGGTATAACTCAACCTACAATGATGAGTTTTCAACTGGTCAGC 826
Query 722 CTTTG--G-T--TC-GAGTTCCTCGCT-TGCTCAATCTGGTATCAAATGCTTATCTTAAG 774
|||| | | || ||||||| |||| | |||||||| ||||||||||||||||||||
Sbjct 827 CTTTAAAGCTGGTCCGAGTTCCCCGCTCTA-TCAATCTGATATCAAATGCTTATCTTAAG 885
Query 775 TTTCTTAAAGGCCCCGGGACGAGGATATTATTCGAGTTTGTCAAAGAAGTTCCTAAACAC 834
||||| ||||||| ||||| ||||||||||| |||||| ||||||||||||||||| |
Sbjct 886 TTTCTAAAAGGCCTTGGGACAAGGATATTATTTGAGTTTCTCAAAGAAGTTCCTAAAAAA 945
Query 835 CAAACTAAATTCAATCTTGATATCGCTTCCATGCTAGGCCCGCtttttttCACTTGGGTT 894
|||| ||| | |||| || || || ||| |||||||||| ||||| ||||||||||||
Sbjct 946 GAAACGAAAATGAATCAAGACATTGCGTCCTTGCTAGGCCCACTTTTCTTCACTTGGGTT 1005
Query 895 GTTCTTCTTCTATTCCCCGTGATCTTGACATCATTGGTGTATGAGAAACAAGAGCGCCTA 954
||||||||| | ||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct 1006 GTTCTTCTTTTGTTCCCCGTGATCTTGACATCATTGGTGTATGAGAAGCAAGAACGTCTA 1065
Query 955 AGAATTATAATGAAAATGCACGGGCTAGGC 984
||||||||||||||||||||||||||||||
Sbjct 1066 AGAATTATAATGAAAATGCACGGGCTAGGC 1095
> Ahg485139 jgi|Araly1|485139|fgenesh2_kg.5__1131__AT3G47780.1
Length=2852
Score = 955 bits (517), Expect = 0.0
Identities = 1267/1617 (78%), Gaps = 100/1617 (6%)
Strand=Plus/Plus
Query 991 ATAGGACTCAGGTACTTCCGGCTCAATGACTACAGCGTCCAGTTCATTTTCTATTTTATC 1050
|||||||| | || ||| || || |||| ||||||| |||| ||| | ||||||||| ||
Sbjct 1234 ATAGGACTGAAGTTCTTTCGACTTAATGCCTACAGCATCCAATTCGTATTCTATTTTCTC 1293
Query 1051 T-TCGTAAATCTGCAAATC-TCCTTCGCCTTTTTAGCTTCTTCCA-TATTCTCAAAGGTT 1107
| | || |||||||||||| |||| |||||| ||| ||||| || |||| ||||| ||
Sbjct 1294 TAT-GTGAATCTGCAAATCGCCCTT-GCCTTTCTAGTTTCTT-CAGTATTTTCAAATGTC 1350
Query 1108 AAGAC-TGCAACAGTTGTTGCTTATACATTGGTGTTTGCAAGTGGGCTCTTGGGAATGTT 1166
||||| | ||||||||| |||||| | || ||||||| | ||| || ||||| ||||
Sbjct 1351 AAGACAT-CAACAGTTGCTGCTTACATATACGTGTTTGGATCTGGACTTTTGGGCTTGTT 1409
Query 1167 TCT-CTTTGGTGAACTGCTTGAATCTCCCA-CA-TTCCCCGAAAAAGGGATTCTTGCT-T 1222
||| || | ||| ||||| | || || |||| | | ||||| ||| |
Sbjct 1410 TCTACTCAACT-TTCTGATTGAAGAT-TCATCATTTCCTAG-AGGCTGGATTATTG-TCA 1465
Query 1223 TGGAGTTGTATCCCGGCTTTTCCTTATTCCGCGGATTGTATGAGTTCGCGCAATATGC-C 1281
||||||| ||||| ||||||||||||| ||| || | |||||||| || |||| |||
Sbjct 1466 TGGAGTTATATCCTGGCTTTTCCTTATACCGTGGGCTATATGAGTTGGCACAATTTGCTT 1525
Query 1282 TCC-------C------GGGGAA-ACGGGATGAAGTGGAAAGATCTCAAG-GAAAGCGGA 1326
||| | |||||| | |||||||||||||||||| || || || || | |
Sbjct 1526 TCCGGGGAAACTTGAGAGGGGAAGATGGGATGAAGTGGAAAGATTTC-AGTGATAGTGCA 1584
Query 1327 ATGGAT-AAGCTGTTCTACCTCA-TGTCTGTGGAGTGGTTT-GTGATTCTCATTGTGGCC 1383
|||||| | | | || ||| ||| | || || || |||||| || ||||||| ||
Sbjct 1585 ATGGATGATG-TTTTTTACATCATTATC-GTCGAATGGTTTCTTG-CCCTCATTGCAGCA 1641
Query 1384 TACTCTATCGATCTTCTTTCTTCATCAGGGAGAAG-CCC--T-TTCGTT-TT-------C 1431
|||| ||||||| |||||||||| ||| ||| ||| | ||| || || |
Sbjct 1642 TACTATATCGATAAGATTTCTTCATC-CGGAAAAGACCCGTTGTTC-TTCTTGCAAAACC 1699
Query 1432 --TTCAAGAAATCAT-CTTCCCTACCAAGTCCTAGTGTT-CAAAGGCAAAACTCTGAAAA 1487
||||||||||| | |||| | | ||| |||||| || || |||| || | | |||
Sbjct 1700 TTTTCAAGAAATC-TCCTTCTTTGCGAAGGCCTAGT-TTGCAGAGGC-AAGGT-TCCAAA 1755
Query 1488 CGTTCT-CATTGACATGGAAAAAACAGATGTCACTCAGGAGCGGGAAAAAGTTGAGAAAT 1546
| ||| | |||| ||||||||| ||||||| ||||||||| | |||||||||||| ||
Sbjct 1756 -G-TCTCCGTTGAGATGGAAAAACCAGATGTTACTCAGGAGAGTGAAAAAGTTGAGCAAC 1813
Query 1547 TGAGGAAAGAAG-GGACCACGGGGCATGCGATCGTGTGTGACAACCTGAAGAAGGTGTAT 1605
||| | | || || ||| | || ||||| || ||||||||||||||||||||||||
Sbjct 1814 TGATGCTTG-AGTCGAGCACAAGCCACGCGATTGTATGTGACAACCTGAAGAAGGTGTAT 1872
Query 1606 CCAGGTAGCGATGGTAACCCGCCAAAGCTAGCAGTAAGAGGGTTATATCTCGAC-GTGCC 1664
|||||||| ||||| ||||||||||| | ||||| | ||||||| ||||| | |||||
Sbjct 1873 CCAGGTAGAGATGGGAACCCGCCAAAATTGGCAGTCCGGGGGTTATCTCTCG-CTGTGCC 1931
Query 1665 TTCAGGAGAATGCTTTGGCATGCTT-GGACCTAATGGTGCCGGAAAAACCTCTTTCATCA 1723
|||||||||||||||||||||| || || || |||||||| || || || ||||||||||
Sbjct 1932 TTCAGGAGAATGCTTTGGCATG-TTAGGGCCCAATGGTGCTGGCAAGACGTCTTTCATCA 1990
Query 1724 ATATGATGACTGGGCTCCTGAAACCAACATCTGGAACTG--CGTTGGTTCAAGGTTTGGA 1781
|||||||||||||||||||||||||||||||||| || | | ||| |||||||||| ||
Sbjct 1991 ATATGATGACTGGGCTCCTGAAACCAACATCTGGGACAGGAC-TTG-TTCAAGGTTTAGA 2048
Query 1782 CATATGCAAAGATATGAACAAAGTATATACAAGCATGGGAGTCTGCCCGCAACATGACTT 1841
|||||||| |||||| ||| |||||| || |||||||| || |||||||| ||||| ||
Sbjct 2049 TATATGCAATGATATGGACAGAGTATACACCAGCATGGGCGTATGCCCGCAGCATGATTT 2108
Query 1842 GCTCTGGGGGACGCTAACGGGAAGGGAACATCTTCTCTTTTATGGGAGGCTTAAGAATAT 1901
|||||||| || || || |||||||||||||| || ||||||||||| ||||||||| |
Sbjct 2109 GCTCTGGGAAACACTGACAGGAAGGGAACATCTGCTGTTTTATGGGAGACTTAAGAATCT 2168
Query 1902 CAAGGGCTCTGCTCT-AATGCAAGCTGTGGAAGAATCTCTTAAAAGCGTCAGCCTTTTCG 1960
||| ||||||| ||| || |||||||||||||| |||||||| || |||| |||||||
Sbjct 2169 CAAAGGCTCTGATCTCAAC-CAAGCTGTGGAAGAGTCTCTTAAGAGTGTCAACCTTTTCC 2227
Query 1961 ATGGAGGAGTTGCCGATAAACCTGCTGGAAAATACAGCGGAGGTATGAAAAGGCGGCTTA 2020
| ||||||||||| || ||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct 2228 ACGGAGGAGTTGCTGACAAACCTGCTGGGAAATACAGCGGGGGTATGAAAAGGCGGCTGA 2287
Query 2021 GTGTAGCCATTTCGCTTATCGGGAACCCAAAGGTGGTTTACATGGATGAGCCTAGCACTG 2080
| ||||||||||| ||||||||||| || ||||||||||| ||||||||||| || || |
Sbjct 2288 GCGTAGCCATTTCACTTATCGGGAATCCTAAGGTGGTTTATATGGATGAGCCAAGTACAG 2347
Query 2081 GACTTGATCCAGCCTCAAGGAAAGATT-TATGGACAGTGATCCAGCGTGCAAAACAAAAC 2139
|||||||||||||||| || ||||| ||||||| || ||| |||| ||||||||||||
Sbjct 2348 GACTTGATCCAGCCTCGAG-AAAGAACCTATGGACTGTCATCAAGCGCGCAAAACAAAAC 2406
Query 2140 ACAGCCATAATCCTCACAACTCACTCGATGGAGGAAGCAGAGTTTCTTTGCGACCGATTG 2199
|| || |||||||||||||| ||||| ||||| |||||||| ||||| || |||||||||
Sbjct 2407 ACTGCGATAATCCTCACAACCCACTCAATGGAAGAAGCAGAATTTCTATGTGACCGATTG 2466
Query 2200 GGGATTTTTGTAGACGGAGGCTTGCAATGTGTAGGAAATCCGAAAGAGTTAAAGGGAAGA 2259
|| |||||||| ||||||||||||||||| | || || || | |||| | ||||||||
Sbjct 2467 GGTATTTTTGTGGACGGAGGCTTGCAATGCATTGGCAACCCTAGAGAGCTGAAGGGAAGG 2526
Query 2260 TATGGGGGATCATATGTCTTCACGATGACGACCTCAGTT-GAACACGAGGAGAAA-GTAG 2317
|| || ||||| ||||| || |||||||| || ||| | ||||||||| | ||| || |
Sbjct 2527 TACGGTGGATCTTATGTGTTTACGATGACAACATCA-TCAGAACACGAGCA-AAACGTGG 2584
Query 2318 AGA-GAATGGTTAAACATATTTCACCAAACTCCAAGA-GAGTATATCATTTAGCTGGAAC 2375
||| | || || || || | || |||||| |||||| || ||||||| | || |||||
Sbjct 2585 AGAAGC-TGATTCAAGATGTCTCGCCAAACGCCAAGAAGA-TATATCACATCGCAGGAAC 2642
Query 2376 ACAGAAATTCGAGATCCCTAAGCAAGAAG-T-CATGAT-TGCAGATGTGTTTTTCATG-- 2430
||||| || ||| | || || ||| || | | ||| | |||| |||||| || |
Sbjct 2643 CCAGAAGTTTGAGCTTCCAAAA-AAGGAGGTTCG-GATCT-CAGAGGTGTTT--CAGGCT 2697
Query 2431 GTGGAGAAGGTCAAA-AGCAAATTCACAGTTTTTGCTTGGGGACTCGCCGATACAACTCT 2489
|||||||||| | || ||||| ||||| ||||| |||||||||||||| || ||||| ||
Sbjct 2698 GTGGAGAAGG-CGAAGAGCAACTTCACGGTTTTCGCTTGGGGACTCGCAGACACAACCCT 2756
Query 2490 GGAAGACGTCTTCTTCAAGGTTGCTACAACTGCTCAAGCCTTCAAC-TCTTTGTCTT 2545
||||| |||||| |||||||||||| |||| ||| ||||| || ||||| ||||
Sbjct 2757 TGAAGATGTCTTCATCAAGGTTGCTAGGACTGGTCAGGCCTTTAATGTCTTT-TCTT 2812
> Ahg496338 jgi|Araly1|496338|fgenesh2_kg.8__2154__AT5G61700.1
Length=2346
Score = 675 bits (365), Expect = 0.0
Identities = 717/884 (81%), Gaps = 36/884 (4%)
Strand=Plus/Plus
Query 77 CTGATTTGACTAAGTGTGGAAGTCAA-GATGA-TTTTTCTATTGGTGAT-TGTCCCATCC 133
||||| || |||| ||||| || ||| | | | ||| || |||| || ||||||||||
Sbjct 179 CTGATATGTCTAATTGTGG-AGGCAACG-TTACTTTGCCTGGTGGT-ATCTGTCCCATCC 235
Query 134 CAAACCCTCCACTGTTGCCTCCCCTGTTACAGATTCCAGAACCTGAATCT-CGTGCTG-T 191
|||||||||||| ||||||||| |||| ||||||||| ||| |||| || ||| | | |
Sbjct 236 CAAACCCTCCACCGTTGCCTCCGATGTTGCAGATTCCACAACATGAA-CTCCGTTCCGTT 294
Query 192 CAGCGGTGGTTTCTTTTCGTACAATGACCTTCCTGATAAGTCTTGTAGAAAAACTGGAAC 251
|| | ||||||||| ||||| || || ||||| ||||| || ||| ||| ||| |
Sbjct 295 AAG-ACCGATTTCTTTTCCTACAAAGATCTCCCTGACAAGTCATGCAGAGGAACAGGATC 353
Query 252 TTGTCCTGTTACTATACTTCTTACTGG-GAATAACCAT-TCCCTTGGTCAAGCTTTATCT 309
||||||||| || |||||| | ||||| | |||| | | | ||||| ||||||||||
Sbjct 354 TTGTCCTGTAACGATACTTATCACTGGTG-ATAAAC-TGGCTCTTGGAAAAGCTTTATCC 411
Query 310 GGGAATATGTTTGGTGGTTCGTTTGCT-GTGAATTCCTCTGACCTCTTGTCTAGTTTAGC 368
| ||||| || | ||| |||| | || |||||||| ||||||||| ||| ||||||
Sbjct 412 GCAAATATCTTCAGCACTTCTTTTG-TGGTTAATTCCTCCGACCTCTTGCCTACTTTAGC 470
Query 369 CTATAATGTCTTGGGTTCAACACTAGCA-CTAGGCACAAACAATTATGCAGATCCC-GGG 426
| |||| ||||||||||||||| |||| | || | | ||||||||| ||| ||| |||
Sbjct 471 CAATAACGTCTTGGGTTCAACAGAAGCAGCGGGGGA-AGACAATTATGAAGA-CCCGGGG 528
Query 427 ATTGAGTCGGATTTTCCTATCTACAGTATCCAATC-TCAGTGCAGTCCAAACTCTACATG 485
|||| || ||| | ||||| |||||||||||| | || |||||| |||||||||||||
Sbjct 529 ATTGCCTCAGATCTCCCTATTTACAGTATCCAACCTTC-TTGCAGTGCAAACTCTACATG 587
Query 486 GCCACTCTCATTTGGAAAAATTCATACAGCGGTGACGTGTCTTCAAGGGTTGTCTCTATG 545
||||||||| | ||| ||||||| |||||||||| |||| |||||||||||| ||| ||
Sbjct 588 GCCACTCTCGCTCGGACAAATTCAGACAGCGGTGAAGTGTGTTCAAGGGTTGTGTCTCTG 647
Query 546 GAGAAATAACTCTGTAGAGGTCAATGATGAGCTTTTCAAGGGTAATTGGAAGGGAAATCC 605
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||
Sbjct 648 GAGAAATAACTCTGTAGAGGTCAATGATGAGCTTTTCAAGGGTAGTTGGAGGGGAAACCC 707
Query 606 TGAGAGGATGACAAATGAGATTGCTGCAGCATATGATCTCTTGAATACGGATAG-AAACA 664
|| | |||||||||||||||| | ||||||||| |||||| ||| |||||||| ||| |
Sbjct 708 TGCGGGGATGACAAATGAGATCGTTGCAGCATACGATCTCATGAGCACGGATAGGAAA-A 766
Query 665 ACTTCGATGTGACGATCTGGTATAACTCAACAAACATTGATGACCCTTCAAG-GG-CA-C 721
| ||| ||||||| || |||||||||||||| ||| |||||| ||||| || || |
Sbjct 767 ATTTCAATGTGACCATATGGTATAACTCAACCTACAATGATGAGTTTTCAACTGGTCAGC 826
Query 722 CTTTG--G-T--TC-GAGTTCCTCGCT-TGCTCAATCTGGTATCAAATGCTTATCTTAAG 774
|||| | | || ||||||| |||| | |||||||| ||||||||||||||||||||
Sbjct 827 CTTTAAAGCTGGTCCGAGTTCCCCGCTCTA-TCAATCTGATATCAAATGCTTATCTTAAG 885
Query 775 TTTCTTAAAGGCCCCGGGACGAGGATATTATTCGAGTTTGTCAAAGAAGTTCCTAAACAC 834
||||| ||||||| ||||| ||||||||||| |||||| ||||||||||||||||| |
Sbjct 886 TTTCTAAAAGGCCTTGGGACAAGGATATTATTTGAGTTTCTCAAAGAAGTTCCTAAAAAA 945
Query 835 CAAACTAAATTCAATCTTGATATCGCTTCCATGCTAGGCCCGCtttttttCACTTGGGTT 894
|||| ||| | |||| || || || ||| |||||||||| ||||| ||||||||||||
Sbjct 946 GAAACGAAAATGAATCAAGACATTGCGTCCTTGCTAGGCCCACTTTTCTTCACTTGGGTT 1005
Query 895 GTTCTTCTTCTATTCCCCGTGATCTTGACATCATTGGTGTATGA 938
||||||||| | ||||||||||||||||||||||||||| ||||
Sbjct 1006 GTTCTTCTTTTGTTCCCCGTGATCTTGACATCATTGGTG-ATGA 1048
Score = 429 bits (232), Expect = 5e-119
Identities = 506/633 (80%), Gaps = 39/633 (6%)
Strand=Plus/Plus
Query 1123 GTTGCTTATACATTGGTGTTTGCAAGTGGGCTCTTGGGAATG-TTTCTCTTT-GGTGAAC 1180
|||||||| | |||||||| | || |||||||||||| | | ||||| ||| ||
Sbjct 1102 GTTGCTTACATATTGGTGTACGGAACTGGGCTCTTGGGTA-GCTTTCT-TTTCCAAAAAA 1159
Query 1181 TGCTTGAATCTCCCACATTCCCCGAAAAAGGGATTCTTGCTTTGGAGTTGTATCCCGGCT 1240
|| ||||| || ||||||| ||| || |||||||||| ||||||||||||||||||
Sbjct 1160 TGATTGAAAATCAGTCATTCCCGGAAGAATGGATTCTTGCCATGGAGTTGTATCCCGGCT 1219
Query 1241 TTTCCT-TATTCCGCGGATTGTATGAGTTCGCGCAATATGCCTCCCGGGGAAACGGGATG 1299
||| || | | |||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct 1220 TTT-CTCTGTACCGCGGGTTGTATGAGTTCTCGCAATATGCCTCCCGGGGAAACGGGATG 1278
Query 1300 AAGTGGAAAGATCTCAAG-GAAAGCGGAATGGAT-AAGCTGTTCTACCTCATGTCTGTGG 1357
|||||| ||||||||| | || |||||||||| | ||| | |||| ||||||| | |
Sbjct 1279 AAGTGGCAAGATCTCA-GTGATAGCGGAATGGGTGAAGTT-TTCTGTATCATGTCAATAG 1336
Query 1358 AGTGGTTTGT-GATTCTCATTGTGGCCTACTCTATCGATCTTCTTT-CTTCATCAGGGAG 1415
|||||||| | | | |||||||| ||||||| |||||||| ||| | |||| || |
Sbjct 1337 AGTGGTTTCTTGCT-CTCATTGTAGCCTACTATATCGATCAGGTTTTCA-CATCCGG-A- 1392
Query 1416 AAGC--CCTTTCGTTTTCTT------C------AAGAAATCATCTTCCCTACCAAGT--- 1458
|||| |||||| ||||||| | |||||| | ||||||||||||||
Sbjct 1393 AAGCATCCTTTCTTTTTCTTGGTGAACCCTTTCAAGAAACCTTCTTCCCTACCAAGGAGG 1452
Query 1459 CCTAGTGTTCAAAGGCAAAACTCTGAAAACGTTCTC-ATTGACATGGAAAAAACA-GATG 1516
|||| ||| |||||| | ||| |||| || ||| || || || |||||| | |||
Sbjct 1453 CCTACTGTGCAAAGGGTGGATTCTAAAAAAGT-CTCCATAGATATAGAAAAA-CTTGATA 1510
Query 1517 TCACTCAGGAGCGGGAAAAAGTTGAGAAATTGAGGAAAGAAGGGACCACGGGGCATGCGA 1576
||||| ||||| ||||||| ||| | ||||||||||| ||||| | ||| ||||||||||
Sbjct 1511 TCACTGAGGAGAGGGAAAAGGTTCAAAAATTGAGGAATGAAGGTAGCACAGGGCATGCGA 1570
Query 1577 TCGTGTGTGACAACCTGAAGAAGGTGTATCCAGGTAGCGATGGTAACCCGCCAAAGCTAG 1636
|| |||||||||||||||| ||||| ||||||||||| ||||||||||||||||| | |
Sbjct 1571 TCTTGTGTGACAACCTGAAAAAGGTTTATCCAGGTAGAGATGGTAACCCGCCAAAAATGG 1630
Query 1637 CAGTAAGAGGGTTATATCTC-GACGTGCCTTCAGGAGAATGCTTTGGCATGCTTGGACCT 1695
||||| ||||||| |||||| | ||| ||||||||||||||||| |||||||||||||||
Sbjct 1631 CAGTACGAGGGTTGTATCTCAG-CGTTCCTTCAGGAGAATGCTTCGGCATGCTTGGACCT 1689
Query 1696 AATGGTGCCGGAAAAACCTCTTTCATCAATATG 1728
||||||||||| ||||| || ||||||| ||||
Sbjct 1690 AATGGTGCCGGCAAAACTTCCTTCATCAGTATG 1722
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 96025507645
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5