BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G61900.1
Length=2071
Score E
Sequences producing significant alignments: (Bits) Value
Ahg496358 jgi|Araly1|496358|fgenesh2_kg.8__2174__AT5G61900.1 2937 0.0
Ahg487555 jgi|Araly1|487555|fgenesh2_kg.6__689__AT5G07300.1 1426 0.0
> Ahg496358 jgi|Araly1|496358|fgenesh2_kg.8__2174__AT5G61900.1
Length=2053
Score = 2937 bits (1590), Expect = 0.0
Identities = 1777/1867 (95%), Gaps = 13/1867 (1%)
Strand=Plus/Plus
Query 1 GAGCGAGTCAATT-AAAAGAAAAGA-AAAAGCG-CGACTTAGACAAGTACTTTTGAATCC 57
||||||||||||| |||| |||| | ||||| | |||||||||||| | |||||||||||
Sbjct 1 GAGCGAGTCAATTAAAAAAAAAAAAGAAAAG-GTCGACTTAGACAACTGCTTTTGAATCC 59
Query 58 GCAGtttt-ttttGTTGGGAAATC-AA-A-AA-T-T--ATGGGGAATTGTTGCTCCGATG 109
||||||| ||| |||||||||| || | || | | ||||||||||| ||||||||||
Sbjct 60 ACAGTTTTACTTT-TTGGGAAATCAAAGAGAATTATCCATGGGGAATTGCTGCTCCGATG 118
Query 110 TCGCCTCCGGTGCTGGTGCTACAGCCGGCGTTGGTGGAAGTGGTTCCTCCGCCGCTCTCG 169
|| | |||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 119 TCTCTTCCGGTGCTGGTGCTACAGCCGGCGTTGGTGGAACTGCTTCCTCCGCCGCTCTCG 178
Query 170 GTGCGACTAACGACGCCCTTGATTACTATCTCAAGTCCAAAGGTTTCAACGGACTCTTCT 229
| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 179 GCGCGACTAACGACGCCGTTGATTACTATCTCAAGTCGAAAGGTTTCAACGGACTCTTCT 238
Query 230 CGCAGATAGAGCTATCGTTTTCAGCTTCGAATTTGCGAGACCGCGACGTGCTCTCCAAGA 289
| ||||| |||||||||||||||||||||||||| |||||| | ||||||||||| ||||
Sbjct 239 CTCAGATCGAGCTATCGTTTTCAGCTTCGAATTTACGAGACAGGGACGTGCTCTCTAAGA 298
Query 290 GTGATCCTATGGTTGTTGTATATCAAAAAGAAAAAGATGCAACACTTTCAGAAGTTTTCC 349
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 299 GTGATCCTATGGTTGTTGTATATCAAAAGGAAAAAGATGCAACACTTTCAGAAGTTTTCC 358
Query 350 GCAGTGAAGTTGTTTTGAACTCTTTAGCTCCGAAATGGATTAAGAAATTTATAGTCGCTT 409
|||| |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 359 GCAGCGAAGTTGTTTTGAACTCTTTAGCTCCGAAATGGATTAAGAAATTTACAGTAGCTT 418
Query 410 ATCATTTCGAGACTGTGCAGACATTGGTGTTTCGTGTGTATGATGTTGACACCAAATTTC 469
||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 419 ATCATTTTGAGACAGTGCAGACGTTGGTGTTTCGTGTGTATGATGTTGACACCAAATTTC 478
Query 470 AAAATTCAAGAGAGGAGATGCTTAAGCTTGACGAACAGCAGTTTCTTGGTGAGGCAACAT 529
||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 479 AAAATTCAAAAGAGGAGATGCTTAAGCTTGACGAACAGCAGTTTCTCGGTGAGGCAACAT 538
Query 530 GTGCATTGTCTGAGATAATCACAAAATCAACTAGGACGAGCACATTAGAACTCAAGCGCA 589
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 539 GTGCATTGTCTGAGATAATCACAAAATCAACTAGGACCAGTACATTAGAACTCAAGCGCA 598
Query 590 AAGATGGCTTTGCTCCACAGGCTCAGCCTCACCACGGAAAGCTTATCATCCATGCTGAGG 649
|||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 599 AAGAAGGCTTTGCTCCACAGACTCAGCCTCACCACGGAAAGCTTATCATCCATGCTGAGG 658
Query 650 AGTCCCTTGCTTCTAAGATTTCAACAGAGATAGTATTTAGATGTTCGAATTTGGAATCTA 709
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 659 AGTCCCTTGCTTCTAAGATTTCAACAGAGATAGTATTTAGATGTTCGAGTTTGGAATCTA 718
Query 710 AGGATCTTTTTTCAAAAAGTGACCCCTTTTTGGTGGTATCAAAGATTGTAGAGCATGGAA 769
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 719 AGGATCTTTTCTCAAAAAGTGACCCCTTTTTGGTGGTATCAAAGATTGTAGAGCATGGAA 778
Query 770 CTCCAATTCCCGTGTCTAAAACTGAAGTCCGGAAGAATGATCTTAACCCTATTTGGAAGC 829
|||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct 779 CTCCAATTCCCGTGTCTAAAACTGAAGTTCGGAAAAATGATCTTAACCCTATTTGGAAAC 838
Query 830 CAGTCTTTCTTAGTGTTCAACAAGTGGGAAGTAAGGACAGTCCAGTGATAATAGAATGCT 889
| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 839 CTGTCTTTCTTAGTGTTCAACAAGTGGGAAGTAAGAACAGTCCACTGATAATAGAATGCT 898
Query 890 CAGACTTTAACTCCAATGGCAAACACAGTCTGATTGGGAAAGTTCAGAAATCGCTTTCAG 949
| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 899 CGGACTTTAACTCCAATGGCAAACACAGTCTGATTGGGAAAGTTCAGAAATCACTTTCTG 958
Query 950 ACTTAGAAAAACTTCATTTGGCGGGCCAAGGAATCAATTTTTCTTTGCCTACTGGTGCTG 1009
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct 959 ACTTAGAAAAACTTCATTTGGCTGGCCAAGGAATCAATTTATCTTTGCCTACTGGTGCTG 1018
Query 1010 GACAAAACAAGGTGTTAAAGAGCCAACTTTTTGTGGACAAGTTTACCGAGACTGTCCACC 1069
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1019 GAAAAAACAAGGTGTTAAAGAGCCAGCTTTTTGTGGACAAGTTTACCGAGACTGTCCACC 1078
Query 1070 ACACATTCCTAGAGTACTTGGCATCTGGATTTGAGTTAAACTTTATGGTAGCAATCGATT 1129
|||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||
Sbjct 1079 ACACATTCCTAGAGTACTTGGCATCTGGGTTTGAGTTAAACTTCATGGTAGCTATCGATT 1138
Query 1130 TCACAGCTTCAAATGGAAATCCCCGCCTCCCTGATTCTTTGCACTACATTGATCCTTCTG 1189
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1139 TCACAGCTTCAAATGGAAATCCCCGCCTCCCTGATTCTTTGCATTACATTGATCCTTCAG 1198
Query 1190 GACGATTAAATGCCTACCAGAGAGCAATAATGGATGTTGGAGAAGTGTTGCAGTTTTATG 1249
||||| |||||||||| |||||||||||| | ||||||||||||||||||||||||||||
Sbjct 1199 GACGACTAAATGCCTATCAGAGAGCAATAGTAGATGTTGGAGAAGTGTTGCAGTTTTATG 1258
Query 1250 ACTCAGACAAACGTTTCCCTGCCTGGGGATTCGGAGCTCGTCCAATCGACGCTCCAGTTT 1309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 ACTCAGACAAACGTTTCCCTGCCTGGGGATTCGGAGCTCGTCCAATCGACGCTCCAGTTT 1318
Query 1310 CACATTGCTTTAATCTAAATGGAAGCAGTTCATACTCTGAGGTGGATGGGATTCAAGGAA 1369
||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||||| |
Sbjct 1319 CACATTGCTTTAACCTAAATGGAAGCAATTCGTACTCTGAGGTGGATGGGATTCAAGGTA 1378
Query 1370 TCATGACTTCATACACCAGTGCCCTTTTCAACGTCTCTCTTGCAGGGCCTACCCTTTTTG 1429
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1379 TCATGACTTCATACACCAGTGCCCTCTTCAACGTCTCTCTTGCAGGGCCTACCCTTTTTG 1438
Query 1430 GTCCAGTGATCAACGCTGCTGCAATGATCGCCAGCGCGTCGCTAGCTCAAGGTTCACGGA 1489
|||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||
Sbjct 1439 GTCCAGTGATCAACTCTGCTGCAATGATCGCCAGCGCATCTCTAGCTCAAGGTTCACGGA 1498
Query 1490 AATATTACGTCTTACTGATCATAACAGATGGTGTTATAACTGATCTTCAAGAAACAAAAG 1549
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1499 AATACTACGTCTTACTGATCATAACAGATGGTGTTATAACAGATCTTCAAGAAACAAAAG 1558
Query 1550 ACGCATTAGTCAGTGCATCGGATTTGCCCTTATCAATCCTCATTGTAGGAGTTGGAGGAG 1609
|||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct 1559 ACGCATTAGTCAGTGCCTCAGATTTACCGTTATCAATCCTCATTGTAGGAGTTGGAGGAG 1618
Query 1610 CTGATTTTAAAGAGATGGAGATACTAGACGCAGATAAAGGAGAAAGATTGGAGAGTTCGA 1669
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 1619 CTGATTTTAAAGAGATGGAGATACTAGACGCAGATAGAGGAGAAAGATTGGAGAGCTCGA 1678
Query 1670 GCGGGCGATTGGCTTCACGAGACATTGTTCAGTTTGTGGCACTACGAGATGTCCAATATG 1729
|||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 1679 GCGGGCGATTGGCTTCACGAGATATTGTTCAGTTCGTGGCACTACGAGATGTCCAATATG 1738
Query 1730 GAGAGATCTCAGTGGTACAAGCGCTTCTAGCAGAATTGCCTTCGCAGTTTTTGACGTATA 1789
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 GAGAGATCTCAGTGGTACAAGCGCTTCTAGCAGAATTGCCTTCGCAGTTTTTGACGTATA 1798
Query 1790 TGAGAATCCGTAATATGAAACCGATTCCTCCATGAATGATCTCGTCTCGTGTGTAAATGA 1849
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 1799 TGAGAATCCGTAATATGAAGCCGATTCCTCCATGAATGATATCGTCTCGTGTGTAAATGA 1858
Query 1850 AGTGTGT 1856
|||||||
Sbjct 1859 AGTGTGT 1865
Score = 195 bits (105), Expect = 2e-48
Identities = 168/195 (86%), Gaps = 17/195 (9%)
Strand=Plus/Plus
Query 1887 CGGTTAAAAATCGCTGTCGTTTTGCGCGATTACATAAGCTTTTTCCATTTTTATAATAAA 1946
||||||||||| |||||||| || |||||||||||||||||||||||||||| || |||
Sbjct 1866 CGGTTAAAAATTGCTGTCGTATTACGCGATTACATAAGCTTTTTCCATTTTT-TA-TAAT 1923
Query 1947 AAT-GTCTGAATGTGGGATGTAA-GT-T----T--CGAATGAAGAGGCTGATGTACACAT 1997
||| |||||||||||||||||| || | | ||||||||||| |||||||| ||||
Sbjct 1924 AATTGTCTGAATGTGGGATGTACTGTATAAAGTGTCGAATGAAGAGACTGATGTA-ACAT 1982
Query 1998 TTGTCTT-GATTTCTTTTACATCAATACTTGGAATTTGAAGATATCTGTTTTGTGCAGCT 2056
||||||| ||||| | || ||||||||||||||| |||||||||||||||||||||||
Sbjct 1983 TTGTCTTTGATTT-T---ACTTCAATACTTGGAATTGGAAGATATCTGTTTTGTGCAGCT 2038
Query 2057 TAATTTCTTCTATTG 2071
|||||||| |||||
Sbjct 2039 CAATTTCTTTTATTG 2053
> Ahg487555 jgi|Araly1|487555|fgenesh2_kg.6__689__AT5G07300.1
Length=1993
Score = 1426 bits (772), Expect = 0.0
Identities = 1384/1672 (83%), Gaps = 72/1672 (4%)
Strand=Plus/Plus
Query 176 CTAACGACGCCCTTGATTACTATCTCAAGTC-CAAAGGTTTCAACGGACTCTTCTCGCAG 234
||||||||||| |||| |||||||||||||| | || | ||| || ||||| || |||
Sbjct 181 CTAACGACGCCGTTGACTACTATCTCAAGTCTC-GTGGCTACAATGGCCTCTTTTCTCAG 239
Query 235 ATAGAGCTATCGTTT-TCAGCTTCGAATTTGCGAGACCGCGACGTGCTCTCCAAGAGTGA 293
|| ||| | || ||| ||||||| |||||||||||||| |||||| | || ||||||||
Sbjct 240 ATCGAGTTGTC-TTTCGCAGCTTCCAATTTGCGAGACCGGGACGTGATTTCAAAGAGTGA 298
Query 294 TCCTATGGTTGTTGTATATCA-AAAAGAAAAAGATGCAACACTTTCAGAAGTT-TTCCGC 351
| | ||||| ||||| ||| | ||||| || ||||| ||||||| | ||| || || ||
Sbjct 299 TGCAATGGTGGTTGTTTAT-ACAAAAGGAAGAGATGGAACACTTGCTGAA-TTGTTTCGA 356
Query 352 AGTGAAGTTGTTTTGAACTCTTT-AGCTCCGAAATGGATTAAGAAATTTA-TAGTCGCTT 409
| ||||||||||||||| ||||| | | || |||||||||||||| |||| || ||||||
Sbjct 357 ACTGAAGTTGTTTTGAATTCTTTGAAC-CCTAAATGGATTAAGAATTTTACTA-TCGCTT 414
Query 410 ATCATTTCGAGACTGTGCAGACATTGGTGTTTCGTGTGTATGATGTTGACAC-CAAATTT 468
|||| ||||||| |||||| |||||| |||||||||| |||||| ||||||| | | |||
Sbjct 415 ATCAGTTCGAGATTGTGCAAACATTGCTGTTTCGTGTCTATGATATTGACACTC-AGTTT 473
Query 469 CAAAATTC-AAGAGAGGAGATGCTTAAGCTTGACGAACAGCAGTTTCTTGGTGAGGCAAC 527
|||||||| ||| |||||| |||||||||| ||||| ||||| ||||| |||||||||||
Sbjct 474 CAAAATTCTAAG-GAGGAGTTGCTTAAGCTCGACGAGCAGCAATTTCTCGGTGAGGCAAC 532
Query 528 ATGTGCATTGTCTGAGATAATCACAAAATCAACTAGGACGA--GCACATTAGAACTCAAG 585
|||| ||||||||||||| | || ||||||| |||||||| || | |||||||| | |
Sbjct 533 ATGTACATTGTCTGAGATTGTTACCAAATCAAATAGGACGATTGC-C-TTAGAACTTATG 590
Query 586 CGCAAAGATGGCT-TTGCTCCACAGGCTCAGCCTC--ACCA-CGGAAAGCTTATCATCCA 641
|| ||||| || | | ||| ||||| ||||||| | | || ||||||||||| ||||
Sbjct 591 CGTAAAGAAGG-TGTGGCTGCACAGACTCAGCCACAAAACAGTGGAAAGCTTATTGTCCA 649
Query 642 TGCTGAGGAGTCCCTTGCTTCTAAGATTTC-A-ACAGAGATAGTATTTA-GATGTTCGAA 698
|||||||||||| || |||||||||| | | |||||||| ||||||| | ||| |||
Sbjct 650 TGCTGAGGAGTCTCTAGCTTCTAAGA--CCAATACAGAGATTGTATTTAGGGGGTT-GAA 706
Query 699 TTTGGAATCTAAGGAT-CTTTTTTCAAAAAGTGACCCCTTTTTGGTGGTATCAAAGATTG 757
||||||||| |||||| | ||| || ||||||||||| ||||||||| |||| |||||||
Sbjct 707 TTTGGAATCAAAGGATAC-TTTCTCTAAAAGTGACCCGTTTTTGGTGATATCTAAGATTG 765
Query 758 TAGAGCATGGAACTCCAATTCCC-GTGTCTAAAACTGAAGTCCGGAAGAATGATCTTAAC 816
| ||||| || ||||||| |||| || |||||||| |||||| |||||||||| ||
Sbjct 766 TTGAGCACGGGACTCCAA-TCCCGGTCTCTAAAACCGAAGTCTTAAAGAATGATCCCAAT 824
Query 817 CCTA-TTTGGAAGCCAGTCTTTCTTAGTGTTCAACAAG-TGGGAAGTAAGGACAGTCCAG 874
|| | ||||||| ||||||| ||| ||||||||||||| |||| ||||||||||| |||
Sbjct 825 CC-ACTTTGGAAACCAGTCTCTCTAAGTGTTCAACAAGTTGGG-AGTAAGGACAGCCCAC 882
Query 875 TGATAATAGAATGCTCAGACTTTAACT-CCAATGGCAAACACAG-TCTGATTGGGAAAGT 932
|| ||||||| |||| |||||| || | |||||||| ||| | ||| |||||||||||
Sbjct 883 TGGTAATAGAGTGCTTAGACTTCAA-TGGAAATGGCAATCAC-GATCTTATTGGGAAAGT 940
Query 933 TCAGAAATCGCTTTCAGACTTAGAAAAACTTCATTTGGCGGGCCAAGGAATCAATTTT-T 991
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 941 TCAGAAATCACTTTCAGACTTAGAAAAACTTCATTTGGCTGGCCAAGGAATCAATTTAGT 1000
Query 992 CTTTGCCTACTGGTGCTGGACA-AAACA--A-G---GTGT-T-AAAGAGCCAACTTTTTG 1042
||| |||||||||| |||||| ||||| | | | || | ||||||||| ||||| |
Sbjct 1001 CTTA-CCTACTGGTGTTGGACATAAACATGAAGACAGGGTATTAAAGAGCCAGCTTTTCG 1059
Query 1043 TGGACAAGTTTACCGAGACTGTCCACCACACATTCCTAGAGTACTTGGCATCTGGATTTG 1102
| ||||||||||| || || ||||| || ||||| || || |||||||| ||||||||||
Sbjct 1060 TCGACAAGTTTACTGAAACCGTCCAGCATACATTTCTTGAATACTTGGCGTCTGGATTTG 1119
Query 1103 AGTTAAACTTTATGGTAGCAATCGATTTCACAGCTTCAAATGGAAATCCCCGCCTCCCTG 1162
| || ||||| ||||| || || |||||||||||||||||||||||||| || ||||| |
Sbjct 1120 AATTGAACTTCATGGTCGCCATTGATTTCACAGCTTCAAATGGAAATCCTCGTCTCCCAG 1179
Query 1163 ATTCTTTGCACTACATTGATCCTTCTGGACGATTAAATGCCTACCAGAGAGCAATAATGG 1222
|||| ||||| |||||||||||| | |||||||||||||||||||||| ||||||| | |
Sbjct 1180 ATTCCTTGCATTACATTGATCCTACAGGACGATTAAATGCCTACCAGACAGCAATAGTTG 1239
Query 1223 ATGTTGGAGAAGTGTTGCAGTTTTATGACTCAGACAAACG-TTTCCCTGCCTGGGGATTC 1281
| || ||||||||||||||||| ||||||||||||||||| ||||| || ||||| ||
Sbjct 1240 AAGTAGGAGAAGTGTTGCAGTTCTATGACTCAGACAAACGATTTCCA-GCATGGGGTTTT 1298
Query 1282 GGAGCTCGTCCAATCGACGCTCCAG-TTTCACATTGCTTTAATCTAAATGGAAGCAGTTC 1340
|||||||||||||||||| ||| | |||||||||||||||| || || ||||||||| |
Sbjct 1299 GGAGCTCGTCCAATCGACA-TCCCGGTTTCACATTGCTTTAACCTCAACGGAAGCAGTAC 1357
Query 1341 ATACT-CTGAGGTGGATGGGATTCAAGGAATCATGACTTCATACACCAGTGCCCTTTTCA 1399
|| | | ||||| ||||| |||||||||||||||| | | |||| |||| || ||||
Sbjct 1358 TTATTGC-GAGGTAGATGGAATTCAAGGAATCATGAATGCCTACAATGGTGCTCTCTTCA 1416
Query 1400 ACGTCTCTCTTGCAGGGCCTACCCTTTTTGGTCCAGTGATCAACGCTGCTGCAATGATCG 1459
|||| ||| ||||||||||||| || |||||||| || |||||||||||||||| ||||
Sbjct 1417 ACGTTTCTTTTGCAGGGCCTACTCTATTTGGTCCTGTAATCAACGCTGCTGCAACAATCG 1476
Query 1460 CCAGCG-CGTCGCTAGCTCAAGGTTC-ACGGAAATATTACGTCTTACTGATCATAACAGA 1517
| |||| | || || |||||| || | | | |||||||||||||| | || || |||||
Sbjct 1477 CAAGCGAC-TCACTCGCTCAAAGTGCTAAG-AAATATTACGTCTTGTTAATAATCACAGA 1534
Query 1518 TGGTGTTATAACTGATCTTCAAGAAACAAAAGACGCA-TTAGTCAGTGCATCGGATTTGC 1576
||| || ||||| |||||||||||||||| ||||||| || ||||||||||||||| | |
Sbjct 1535 TGGAGTAATAACAGATCTTCAAGAAACAAGAGACGCAATT-GTCAGTGCATCGGATCT-C 1592
Query 1577 CC-TTATCAATCCTCATTGTAGGAGTTGGAGGAGCTGATTTTAAAGAGATGGAGATACTA 1635
|| ||||||||||||||||| ||||| ||||||||||| | |||||| |||||| |||||
Sbjct 1593 CCATTATCAATCCTCATTGTTGGAGTAGGAGGAGCTGACTATAAAGAAATGGAGGTACTA 1652
Query 1636 GACGCAGATAAAGGAGA-AAGATTGGAGAGTTCGAGCGGGCG-ATTGGCTTCACGAGACA 1693
|| | |||||||||||| || ||| ||||| || ||||| || || | | || || || |
Sbjct 1653 GATGGAGATAAAGGAGAGAA-ATTAGAGAGCTCCAGCGGTCGCATAG-CATCGCGTGATA 1710
Query 1694 TTGTTCAGTTTGTGGCACTACGAGATGTCCAATATGGAGAGATCTCAGTGGTACAAGCGC 1753
| || |||||||| ||| ||||||| | |||||||||||| |||||||||| |||| |
Sbjct 1711 TCGTCCAGTTTGTTGCATTACGAGACATACAATATGGAGAGGTCTCAGTGGTTGAAGCAC 1770
Query 1754 TTCTAGCAGAATTGCCTTCGCAGTTTTTGACGTATATGAGAATCCGTAATAT 1805
||||||||||||||||| | || ||||||||||||||||||| |||||||||
Sbjct 1771 TTCTAGCAGAATTGCCTACACAATTTTTGACGTATATGAGAAACCGTAATAT 1822
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77894551025
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5