BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G62410.1 Length=3763 Score E Sequences producing significant alignments: (Bits) Value Ahg496418 jgi|Araly1|496418|fgenesh2_kg.8__2234__AT5G62410.1 5877 0.0 Ahg951014 jgi|Araly1|951014|scaffold_802901.1 243 1e-62 Ahg924122 jgi|Araly1|924122|scaffold_105403.1 193 1e-47 Ahg337680 jgi|Araly1|337680|fgenesh1_pg.C_scaffold_1004245 189 1e-46 Ahg358442 jgi|Araly1|358442|fgenesh1_pg.C_scaffold_8002229 69.4 2e-10 > Ahg496418 jgi|Araly1|496418|fgenesh2_kg.8__2234__AT5G62410.1 Length=3665 Score = 5877 bits (3182), Expect = 0.0 Identities = 3508/3663 (96%), Gaps = 32/3663 (1%) Strand=Plus/Plus Query 33 GAAGAAGAAGGAAGATGCATATAAAGGAGATATGCTTGGAGGGTTTTAAATCATACGCGA 92 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 1 GAAGAAGAAGGAAGATGCATATAAAAGAGATATGCTTGGAGGGTTTCAAATCATACGCGA 60 Query 93 CGAGGACGGTGGTTTCTGGTTTCGATCCACATTTCAACGCGATAACGGGTCTGAATGGTT 152 ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 61 CGAGGACTGTGGTTTCTGGTTTCGATCCACATTTCAACGCAATAACGGGTCTGAATGGTT 120 Query 153 CGGGAAAATCCAACATCCTCGATTCCATCTGTTTCGTTCTGGGTATCACCAATCTTCAGC 212 |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 121 CGGGCAAATCCAACATCCTCGATTCCATCTGTTTCGTTCTGGGTATCACTAATCTTCAGC 180 Query 213 AAGTTCGAGCTGCTAATCTTCAGGAACTCGTCTATAAGCAAGGCCAAGCTGGGATTACTA 272 | ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||| | Sbjct 181 AGGTTCGAGCTGCGAATCTTCAGGAGCTCGTCTACAAGCAAGGCCAAGCTGGGATTACCA 240 Query 273 AGGCGACTGTCTCGGTTACCTTTGACAATTCCGAGAGACACAGAAGCCCTCTCGGCTACG 332 | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 241 AAGCGACTGTGTCGGTTACCTTTGACAATTCCGAGAGACACAGGAGCCCTCTCGGCTACG 300 Query 333 AAGAACATCCAGAGATTACTGTGACTAGACAAATTGTAGTTGGTGGAAGGAACAAGTATT 392 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 301 AAGAACATCCGGAGATTACTGTGACTAGACAAATTGTAGTTGGTGGTCGGAACAAGTATT 360 Query 393 TGATAAATGGGAAGCTAGCACAACCAAGTCAAGTTCAGAATCTATTT-CACTCGGTGCAG 451 ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| Sbjct 361 TGATAAATGGGAAGCTAGCACAACCAAGTCAAGTTCAGAATCT-TTTCCACTCGGTGCAG 419 Query 452 CTTAATGTCAACAATCCACACTTTCTCATCATGCAAGGGCGTATCACCAAAGTTTTGAAT 511 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 420 CTTAATGTCAACAATCCACACTTTCTCATCATGCAAGGGCGTATCACCAAAGTCTTAAAT 479 Query 512 ATGAAGCCTCCGGAGATATTGTCCATGCTTGAAGAAGCTGCTGGAACAAGGATGTATGAA 571 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 480 ATGAAACCTCCGGAGATATTGTCCATGCTTGAAGAAGCTGCTGGAACAAGAATGTATGAA 539 Query 572 AACAAGAAA-GAGGCTGCATTGAAAACGCTTGaaaaaaaGCAGACCAAGGTTGATGAGAT 630 ||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 540 AACAA-AAAGGAAGCTGCATTGAAAACGCTTGAAAAAAAGCAGACCAAGGTTGATGAGAT 598 Query 631 TAATAAGCTTCTTGATCATGAAATATTGCCGGCTCTCGAGAAGTTGAGGAAAGAAAAATC 690 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 599 TAATAAGCTCCTTGATCATGAAATATTGCCGGCGCTCGAGAAGTTGAGGAAAGAAAAATC 658 Query 691 ACAGTACATGCAGTGGGCTAATGGTAACGCGGAGCTAGATCGACTAAGGAGATTCTGTAT 750 ||| ||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct 659 ACAATACATGCAGTGGGCTAATGGTAACGCGGAACTCGATCGACTAAGGAGATTCTGTAT 718 Query 751 TGCCTTTGAATATGTTCAAGCGGAGAAGATTAGAGACAATGCTGTTCTTGGAGTTGGAGA 810 ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct 719 TGCCTTTGAATATGTTCAAGCAGAGAAGATTAGAGACAGTGCTGTTCTTGGAGTTGGAGA 778 Query 811 AATGAAGGCGAAGCTCGGGAAGATTGACGCGGAAACAGAAAAGACACAGGAAGAAATACA 870 |||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||| Sbjct 779 AATGAAGGCGAAGCTCACTAAGATTGACGAGGAAACAGAAAAGACACAGGGAGAAATACA 838 Query 871 GGAATTTGAGAAACAGATAAAAGCTCTGACTCAGGCAAAGGAAGCCAGTATGGGGGGAGA 930 |||| |||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 839 GGAAATTGAGAAACATATAAAAGCTCTGACTCGGGCAAAGGAAGCCAGTATGGGGGGAGA 898 Query 931 AGTAAAAACTCTGTCAGAAAAAGTGGATTCACTGGCTCAAGAAATGACACGTGAGTCATC 990 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 899 AGTAAAAACTCTGTCAGAAAAAGTGGATTCACTAGCTCAAGAAATGACACGTGAGTCATC 958 Query 991 TAAACTTAATAACAAGGAGGACACCCTTCTGGGAGAAAAAGAGAATGTTGAAAAGATTGT 1050 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 959 TAAACTTAATAACAAGGAGGACACCCTTCTGGGAGAAAAAGAGAATGCTGAAAAGATTGT 1018 Query 1051 TCACAGTATAGAAGATTTAAAGAAATCCGTAAAGGAGAGAGCCGCTGCTGTGAAGAAGTC 1110 ||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 1019 TCACAATATAGAAGATTTAAAGAAATCCGTAAAAGAGAGGGCCGCTGCTGTGAAGAAGTC 1078 Query 1111 TGAGGAAGGAGCGGCAGACCTAAAACAAAGATTCCAGGAACTCTCCACCACATTGGAAGA 1170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1079 TGAGGAAGGAGCGGCAGACCTAAAACAAAGATTCCAGGAACTCTCCACCACATTGGAAGA 1138 Query 1171 GTGTGAAAAGGAACACCAGGGCGTACTAGCTGGTAAGAGTAGTGGAGATGAAGAGAAATG 1230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1139 GTGTGAAAAGGAACACCAGGGCGTACTAGCTGGTAAGAGTAGTGGAGATGAAGAGAAATG 1198 Query 1231 CTTAGAAGATCAACTACGGGATGCAAAGATTGCTGTTGGAACAGCTGGAACAGAGTTGAA 1290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1199 CTTAGAAGATCAACTACGGGATGCAAAGATTGCTGTTGGAACAGCTGGAACAGAGTTGAA 1258 Query 1291 ACAGCTAAAAACCAAAATAGAACACTGTGAAAAGGAGCTAAAGGAGAGAAAGTCTCAGTT 1350 |||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 1259 ACAGCTGAAAACCAAAATAGAACACTGTGAAAAGGAGCTAAATGATAGAAAGTCTCAGTT 1318 Query 1351 AATGTCAAAACTTGAAGAAGCCATTGAAGTGGAGAATGAACTTGGAGCTAGGAAAAATGA 1410 ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1319 AATGTCAAAACGTGAAGAAGCCATTGAAGTGGAGAATGAACTTAGAGCTAGGAAAAATGA 1378 Query 1411 TGTGGAACATGTAAAAAAGGCACTTGAATCTATTCCTTATAACGAGGGTCAAATGGAAGC 1470 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1379 TGTGGAACGTGTAAAAAAGGCACTTGAATCTATTCCTTATAATGAGGGTCAAATGGAAGC 1438 Query 1471 TTTGGAGAAGGACCGTGGAGCCGAACTTGAAGTTGTGCAGAGGCTGGAAGATAAAGTGCG 1530 ||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 1439 TTTGGAGAAGGACCGCGGAGCTGAACTTGAAGTTGTGCAAAGGCTGGAAGATAAAGTGCG 1498 Query 1531 TGGCTTATCAGCTCAATTAGCAAATTTTCAGTTTACATACAGCGATCCTGTGAGGAACTT 1590 ||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 1499 TGGTTTATCAGCTCAATTAGCAAATGTTCAGTTTACATACCGCGATCCTGTGAGGAACTT 1558 Query 1591 TGACCGATCTAAGGTGAAAGGTGTGGTCGCAAAACTAATAAAAGTAAAAGATAGGTCCTC 1650 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1559 TGACCGATCTAAGGTGAAAGGTGTGGTCGCAAAACTGATAAAAGTAAAAGATAGGTCCTC 1618 Query 1651 AATGACAGCGTTGGAGGTTACTGCTGGTGGCAAGTTGTATGATGTTGTTGTAGACTCAGA 1710 ||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct 1619 AATGACAGCCTTGGAGGTTACTGCTGGTGGGAAGTTGTATAATGTTGTTGTAGACTCAGA 1678 Query 1711 AGATACTGGAAAACAGCTCCTTCAAAACGGTGCTCTTAGGAGAAGAGTTACAATTATACC 1770 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1679 AGATACTGGAAAACAGCTCCTTCAAAACGGTGCTCTTAGGAGAAGAGTTACAATCATACC 1738 Query 1771 TCTGAACAAAATCCAATCTTACGTTGTTCAGCCTAGAGTGCAGCAAGCGACTGCTAGATT 1830 ||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| Sbjct 1739 TCTGAACAAAATCCAATCTTATGTTGTTCAGCCTAGAGTGCAGCAAGTGACTGCTAGATT 1798 Query 1831 GGTTGGAAAGGATAATGCAGAACTGGCACTTTCCTTAGTCGGTTATAGTGATGAATTAAA 1890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1799 GGTTGGAAAGGATAATGCAGAACTGGCACTTTCCTTAGTCGGTTATAGTGATGAATTAAA 1858 Query 1891 GAATGCCATGGAATATGTTTTTGGCTCCACTTTTGTTTGCAAAACTACTGATGTAGCAAA 1950 ||||||||| || ||||||||||| |||||||||||||||||||||||||||| || || Sbjct 1859 GAATGCCATTGAGTATGTTTTTGGTTCCACTTTTGTTTGCAAAACTACTGATGCGGCTAA 1918 Query 1951 GGAAGTTGCTTTTAATCGGGATATTCGGACTCCAAGTGTCACACTTGAAGGTGACATTTT 2010 |||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1919 GGAAGTAGCATTTAATCGGGATATTCGGACTCCAAGTGTCACACTTGAAGGTGATATTTT 1978 Query 2011 CCAGCCAAGTGGTCTTCTTACTGGTGGGAGTCGCAAGGGTGGAGGTGATCGCCTTAGGAA 2070 |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | Sbjct 1979 CCAGCCAAGTGGTCTTCTTACTGGTGGGAGTCGCAAAGGTGGAGGTGATCTCCTTAGGCA 2038 Query 2071 ACTTCATGACCTGGCAGAAGCTGAATCAGAATTACAAGGACACCAAAAAAGGTTGGCTGA 2130 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct 2039 ACTTCATGACCTGGCAGAAGCTGAATCAAAATTACAAGGACACCAAAAAAGGTTGGATGA 2098 Query 2131 CGTTGAATCACAGATCAAAGAGCTTCAGCCTCTTCAAATGAAATTCACAGATGTTTATGC 2190 | ||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct 2099 CATTGAAGCACAGATCAAAGAGCTTCAGCCTCTTCAAAAGAAATTCACAGATGTTAATGC 2158 Query 2191 ACAGTTGGAGCTGAAGACGTATGACTTGTCCTTATTTTTGAAGAGGGCTGAACAAAATGA 2250 |||||||||||| || ||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 2159 ACAGTTGGAGCTAAAAACGTACGACTTGTCCTTATTTTTGAAGAGGGCTGAACAGAATGA 2218 Query 2251 GCATCACAAGCTTGGCGAAGCTGTaaaaaaaCTTGAAGAAGAGCTTGAAGAAGCGAAATC 2310 ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| Sbjct 2219 GCATCACAAGCTTGGCGAAGCAGTAAAAAAACTTGAAGAAGAGCTTGAAGCAGCGAAATT 2278 Query 2311 CCAAATCAAAGAGAAGGAACTTGCTTATAAAAATTGTTTTGATGCTGTTTCCAAACTAGA 2370 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 2279 CCAAATCAAAGAGAAGGAACTTGCTTATAAAAATTGTGTTGATGCTGTTTCCAAACTAGA 2338 Query 2371 GAATTCCATCAAAGACCATGACAAAAACAGAGAAGGAAGACTTAAGGACTTGGaaaaaaa 2430 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2339 GAATTCCATCAAAGACCATGACAAAAACAGAGAAGGAAGACTCAAGGACTTGGAAAAAAA 2398 Query 2431 TATTAAAACCATCAAAGCTCAAATGCAGGCAGCTTCCAAAGATTTAAAGAGTCATGAAAA 2490 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2399 TATTAAGACCATCAAAGCTCAAATGCAGGCAGCTTCCAAAGATTTAAAGAGTCATGAAAA 2458 Query 2491 TGAAAAAGAGAAGCTTGTGATGGAGGAAGAAGCAATGAAGCAAGAACAATCGTCCTTGGA 2550 ||||||||||||||||||||||||| |||| |||||| | ||||||| ||||||||||| Sbjct 2459 TGAAAAAGAGAAGCTTGTGATGGAGAAAGACGCAATGGGGAAAGAACAGTCGTCCTTGGA 2518 Query 2551 GAGCCACTTAACTTCATTGGAAACCCAAATCAGCACTCTGACTTCGGAAGTAGACGAGCA 2610 |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2519 GAGCCACTTAGCTTCATTGGAAACCCAAATTAGCACTCTGACTTCGGAAGTAGACGAGCA 2578 Query 2611 GCGAGCCAAGGTTGATGCCTTACAGAAGATTCATGATGAGTCTCTTGCCGAGCTCAAGTT 2670 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2579 GCGAGCCAAGGTTGATGCCTTACAGAAGATTCATGATGAGTCTCTTGCCGAGCTCAAGTT 2638 Query 2671 GATACATGCAAAGATGAAGGAATGTGATACACAGATAAGTGGTTTTGTCACTGACCAGGA 2730 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2639 GATACATGCAAAGATGAAGGAATGTGATACACAGATAAGTGGTTTTGTCACTGCCCAGGA 2698 Query 2731 AAAGTGTCTGCAGAAGCTTAGTGACATGAAGCTTGAGAGAAAGAAATTGGAAAATGAGGT 2790 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2699 AAAGTGTCTGCAGAAGCTTAGTGACATGAAACTTGAGAGAAAGAAATTGGAAAATGAGGT 2758 Query 2791 CGTAAGGATGGAAACGGATCACAAGGACTGTTCCGTGAAAGTAGACAAACTTGTTGAGAA 2850 |||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 2759 CGTAAGGATGGAGACGGATCACAAGGATTGTTCCGTGAAGGTAGACAAACTTGTTGAGAA 2818 Query 2851 GCATACATGGATAGCATCTGAAAAGCAACTTTTTGGGAAAGGAGGGACAGATTATGATTT 2910 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 2819 GCATACATGGATAGCATCTGAAAAGCAACTTTTTGGAAAAGGAGGGACAGATTATGATTT 2878 Query 2911 TGAATCTTGTGATCCGTATGTGGCCAGAGAAAAACTTGAAAAGCTCCAATCAGATCAATC 2970 ||||| ||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| Sbjct 2879 TGAATTTTGTGATCCGTATGTAGCCAGACAAAAACTTGAAAAGCTCCAGTCAGATCAATC 2938 Query 2971 AGGCTTGGAAAAAAGAGTGAACAAGAAGGTTATGGCTATGTTTGAGAAAGCAGAAGATGA 3030 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2939 AGGCTTGGAAAAAAGAGTGAACAAGAAGGTTATGGCTATGTTTGAGAAAGCAGAAGATGA 2998 Query 3031 ATACAATGCTCTGATATCGaaaaaaaaTACTATCGAGAATGACAAATCAAAAATCACGAA 3090 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 2999 ATACAATGCTCTGATATCGAAGAAAAATACTATCGAGAATGACAAATCAAAAATCACAAA 3058 Query 3091 AGTGATCGAGGAGCTTGATGAGAAGAAAAAAGAAACCCTGAAAGTTACTTGGGTTAAAGT 3150 |||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 3059 AGTGATTGAGGAGCTTGATGAGAAGAAAAAAGAAACCCTGAAAGTCACGTGGGTTAAAGT 3118 Query 3151 TAACCAGGATTTCGGATCAATCTTTTCAACTCTACTACCTGGCACCATGGCAAAACTAGA 3210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3119 TAACCAGGATTTCGGATCAATCTTTTCAACTCTACTACCTGGCACCATGGCAAAACTAGA 3178 Query 3211 ACCTCCTGAAGACGGTAACTTCCTTGATGGTCTTGAGGTGCGTGTTGCCTTTGGAAAAGT 3270 ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 3179 ACCTCCTGAAGGCGGTAGCTTCCTTGATGGTCTTGAGGTGCGTGTTGCCTTTGGAAAAGT 3238 Query 3271 CTGGAAGCAGTCTTTATCAGAACTCAGTGGAGGGCAAAGATCTCTTCTTGCGCTATCACT 3330 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 3239 CTGGAAGCAGTCTTTATCAGAACTCAGTGGAGGGCAAAGATCACTTCTTGCGCTATCACT 3298 Query 3331 AATATTGGCATTGCTTCTCTTCAAACCGGCTCCTCTTTATATATTAGATGAGGTTGATGC 3390 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 3299 AATATTGGCATTGCTTCTCTTCAAACCGGCTCCTCTTTATATATTAGACGAGGTTGATGC 3358 Query 3391 AGCTCTTGATCTCAGTCACACACAGAACATAGGAAGAATGATAAGAGCTCATTTCCCTCA 3450 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 3359 AGCTCTTGATCTCAGTCACACACAGAACATAGGAAGAATGATAAAAGCTCATTTCCCTCA 3418 Query 3451 CTCGCAGTTTATCGTGGTTTCGCTGAAAGAAGGAATGTTCAACAATGCCAATGTTCTTTT 3510 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 3419 CTCGCAGTTTATCGTGGTTTCGCTGAAAGAAGGAATGTTCAACAACGCCAATGTTCTTTT 3478 Query 3511 CCGGACAAAGTTCGTTGATGGAGTTTCAACAGTCCAAAGGACAGTAACAAAGCAGACCAA 3570 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3479 CCGGACAAAGTTCGTTGATGGAGTTTCAACAGTCCAAAGGACAGTAACAAAGCAGACCAA 3538 Query 3571 GTGATA-TGCTTATACGTCATTAGATCAATCCAATCAGTATTCAGATTTTGCAATTCCAT 3629 |||||| | | | | | || | || | ||| || ||||| |||| Sbjct 3539 GTGATAAT-C--A--C-T-AT--G--CA---------G-ATT----TT--GCAATCCCAT 3571 Query 3630 TTGGCCGTTTCCGTCTAACATTTTCTTTGTATTGAAAATCAAGATCTTTGTGTAGAATAT 3689 |||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||| Sbjct 3572 TTGGCCGTTTCCTTCTAGCATTCTCTTTGTATTGAAAATCAAGATCTTTGTGTAGAATAT 3631 Query 3690 GAC 3692 ||| Sbjct 3632 GAC 3634 > Ahg951014 jgi|Araly1|951014|scaffold_802901.1 Length=674 Score = 243 bits (131), Expect = 1e-62 Identities = 152/162 (94%), Gaps = 2/162 (1%) Strand=Plus/Plus Query 2628 CCTTACAGAAGATTCATGATGAGTCTCTTGCCGAGCTCAAGTTGATACATGCAAAGATGA 2687 |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| Sbjct 47 CCTTACAGAAGATTCATGATGAATCTCTTGCCGAGCTCAAGTTGATACATGCAAGGATGA 106 Query 2688 AGGAATGTGATACACA-GATAAGTGGTTTTGTCACTGACCAGGAAAAGTGTCTGCAGAAG 2746 |||||| |||||||| | ||||||||||||||||||| |||||||| |||||||||||| Sbjct 107 GGGAATGCGATACACATG-TAAGTGGTTTTGTCACTGAGCAGGAAAAATGTCTGCAGAAG 165 Query 2747 CTTAGTGACATGAAGCTTGAGAGAAAGAAATTGGAAAATGAG 2788 |||||| ||||||||||||| ||||||||||||||||||||| Sbjct 166 CTTAGTTACATGAAGCTTGAAAGAAAGAAATTGGAAAATGAG 207 Score = 172 bits (93), Expect = 1e-41 Identities = 100/103 (97%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 2974 CTTGGAAAAAAGAGTGAACAAGAAGGTTATGGCTATGTTTGAGAAAGCAGAAGATGAATA 3033 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 291 CTTGGAAAAAAGAGTGAACAAGAAGGTTATGGCTATGTTTGAGAAAGCAGAAGATGAATA 350 Query 3034 CAATGCTCTGATATCGaaaaaaaaTACTATCGAGAATGACAAA 3076 |||||||||||||||||| ||||||||||||||||| || ||| Sbjct 351 CAATGCTCTGATATCGAAGAAAAATACTATCGAGAAAGA-AAA 392 Score = 108 bits (58), Expect = 4e-22 Identities = 84/95 (88%), Gaps = 8/95 (8%) Strand=Plus/Plus Query 2978 GAAA-AAAGAGTGAACAAG-AAGGTTATGGCTATGTTTGAGAAAGCAGAAGATGAATACA 3035 |||| ||| ||| |||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 384 GAAAGAAA-AGTTAACAAGAAAGGTTATTGCTATGTTTGAGAAAGCAGAAGATGAATACA 442 Query 3036 ATGCTCTGATATCGaaa-aaaaaT-AC-TATCGAG 3067 |||||||| |||| ||| |||||| || || |||| Sbjct 443 ATGCTCTGGTATC-AAAGAAAAATTACCTA-CGAG 475 > Ahg924122 jgi|Araly1|924122|scaffold_105403.1 Length=485 Score = 193 bits (104), Expect = 1e-47 Identities = 185/221 (84%), Gaps = 18/221 (8%) Strand=Plus/Plus Query 366 TTGTAGTTGGTGGAAGGAACAAGTATTTGATAAATGGGAAGCTAGCACAACCAAGTCAAG 425 ||||| || |||| || |||||| ||||||||||||||||||| |||||||| ||||||| Sbjct 140 TTGTAATTAGTGGTAGTAACAAGCATTTGATAAATGGGAAGCTTGCACAACCTAGTCAAG 199 Query 426 TTCAGAATCTATTT-CACTCGGTGCAGC-T--TAATGTCAACAATCCACACTTTCTCATC 481 | |||||||| ||| ||||| ||||||| | |||||||||||||||||||||||||||| Sbjct 200 TCCAGAATCT-TTTCCACTCTGTGCAGCTTAATAATGTCAACAATCCACACTTTCTCATC 258 Query 482 ATGCAAGGGCGTATCACCAAAGTTTTGAATATGAAGCCTCCGGAGATATTGTCCATGCTT 541 |||||||| | ||||||||||| || || ||||| ||||| |||||| | || | Sbjct 259 ATGCAAGGTAGAATCACCAAAGTCTTAAACATGAAACCTCCCGAGATA----C--TG-T- 310 Query 542 GAAGAAGCTGCTGGAACAAGGATGTATGAAAACAAGAAAGA 582 | | | |||||||||||| |||||||||||||||||||| Sbjct 311 G--G--G-TGCTGGAACAAGAATGTATGAAAACAAGAAAGA 346 > Ahg337680 jgi|Araly1|337680|fgenesh1_pg.C_scaffold_1004245 Length=489 Score = 189 bits (102), Expect = 1e-46 Identities = 185/222 (83%), Gaps = 18/222 (8%) Strand=Plus/Plus Query 365 ATTGTAGTTGGTGGAAGGAACAAGTATTTGATAAATGGGAAGCTAGCACAACCAAGTCAA 424 |||| |||| |||| | |||||| ||||||||||||||||||| |||||||| |||||| Sbjct 22 ATTGCAGTTAGTGGTCGTAACAAGCATTTGATAAATGGGAAGCTTGCACAACCTAGTCAA 81 Query 425 GTTCAGAATCTATTT-CACTCGGTGCAGC-T--TAATGTCAACAATCCACACTTTCTCAT 480 || |||||||| ||| ||||| ||||||| | ||||||||||||||||||||||||||| Sbjct 82 GTCCAGAATCT-TTTCCACTCTGTGCAGCTTAATAATGTCAACAATCCACACTTTCTCAT 140 Query 481 CATGCAAGGGCGTATCACCAAAGTTTTGAATATGAAGCCTCCGGAGATATTGTCCATGCT 540 ||||||||| | ||||||||||| || || ||||| ||||| |||||| | || | Sbjct 141 CATGCAAGGTAGAATCACCAAAGTCTTAAACATGAAACCTCCCGAGATA----C--TG-T 193 Query 541 TGAAGAAGCTGCTGGAACAAGGATGTATGAAAACAAGAAAGA 582 | | | |||||||||||| |||||||||||||||||||| Sbjct 194 -G--G--G-TGCTGGAACAAGAATGTATGAAAACAAGAAAGA 229 > Ahg358442 jgi|Araly1|358442|fgenesh1_pg.C_scaffold_8002229 Length=360 Score = 69.4 bits (37), Expect = 2e-10 Identities = 39/40 (98%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 3514 GACAAAGTTCGTTGATGGAGTTTCAACAGTCCAAAGGACA 3553 ||| |||||||||||||||||||||||||||||||||||| Sbjct 315 GACTAAGTTCGTTGATGGAGTTTCAACAGTCCAAAGGACA 354 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 142183092728 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5