BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G62660.1 Length=1140 Score E Sequences producing significant alignments: (Bits) Value Ahg358470 jgi|Araly1|358470|fgenesh1_pg.C_scaffold_8002257 1260 0.0 Ahg358465 jgi|Araly1|358465|fgenesh1_pg.C_scaffold_8002252 845 0.0 Ahg918030 jgi|Araly1|918030|Al_scaffold_0008_2781 684 0.0 Ahg358451 jgi|Araly1|358451|fgenesh1_pg.C_scaffold_8002238 497 6e-140 Ahg951049 jgi|Araly1|951049|scaffold_802936.1 361 8e-99 > Ahg358470 jgi|Araly1|358470|fgenesh1_pg.C_scaffold_8002257 Length=1671 Score = 1260 bits (682), Expect = 0.0 Identities = 930/1048 (89%), Gaps = 23/1048 (2%) Strand=Plus/Plus Query 40 AAGACGAGGTCTTCAAAGGTGATGTTGagaagaggaagaaaaagaaga-agaagaataga 98 |||| |||||| ||||| || | | ||||||||||||| ||||||| | |||| ||| Sbjct 625 AAGAAGAGGTCGTCAAA---GACGATAAGAAGAGGAAGAAGAAGAAGACA-AAGAGGAGA 680 Query 99 agaCGCTTTGGTCGCGCCGGAGATCCCTCTCGATCTACTGATCGAGATTCTGACTAAATT 158 | | ||| || || |||||||| ||| | ||||||||||||||||||||||||| ||| Sbjct 681 ATATTTTTTTGTGGCACCGGAGATTCCTTTGGATCTACTGATCGAGATTCTGACTAGATT 740 Query 159 GCCTGCTAAATCTCTTATGAGATTCAAGTGCGTCTCAAAGTTATGGTCTTCTCTTATCCG 218 |||||||||||| ||| |||| ||||||||| |||||||| ||||||||||||||||| | Sbjct 741 GCCTGCTAAATCGCTTTTGAGGTTCAAGTGCATCTCAAAGCTATGGTCTTCTCTTATCTG 800 Query 219 TTCCCGATTTTTTAGCAACT-GTTATCTTACGGTCAAAACTCCACGGCGACCACCTCGTC 277 |||||||||||||||||| | |||||| ||||||| | | |||| |||||||||||||| Sbjct 801 TTCCCGATTTTTTAGCAA-TCGTTATCATACGGTCGCATCCCCACTGCGACCACCTCGTC 859 Query 278 TATACATGAGTTTGGTAG-ACCACCTCTTGTGTAATTCACT-GATGGTTTG-C-C-ACTA 332 |||||||||||||||| | |||||||| ||||||||||| | || |||||| | | || | Sbjct 860 TATACATGAGTTTGGT-GTACCACCTCGTGTGTAATTCAATGGA-GGTTTGCCACAACCA 917 Query 333 CCCATGTGAGTCTGTACTGCTG---TCGTCTAGTAGCAGTGCTGAGTCTTTGGAACAAAA 389 ||| ||||||||||| ||||| || |||||||||||||||||||||||||||||| | Sbjct 918 CCCCCGTGAGTCTGTATTGCTGTCATCTTCTAGTAGCAGTGCTGAGTCTTTGGAACAAGA 977 Query 390 TTTGACAATTGCAGGGATGGGAGGACGCAACATGGTGGTTCTTCGCGGCTTGATTCTATA 449 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 978 TTTGACACTTGCAGGGATGGGAGGACGCAACATGGTGGTTCTTCGCGGCTTGATTCTATA 1037 Query 450 CGTTGTTTGCAGAACGGCGTCTATCTATAATCCCACCACCAGACAAAGTGTAACCTTACC 509 | |||||| |||| ||||| |||||||||||||||||||| |||||||||||||||||| Sbjct 1038 CAATGTTTGTAGAAAGGCGTGTATCTATAATCCCACCACCACACAAAGTGTAACCTTACC 1097 Query 510 TGCTGTCAAATCCAACATCCTTGCTCAAAAATCCCACTGGAATAGTCTCCTCTACTTTTT 569 ||||||||||||||||||| ||||||| ||| | || || ||| ||||||||||||| Sbjct 1098 TGCTGTCAAATCCAACATCTTTGCTCACGAATACTACAATAAGAGTGTCCTCTACTTTTT 1157 Query 570 CGGATACGATCCTGTTCTTGATCAATACAAAGTAGTTTGCACTGTTGCACTATTCTCAAA 629 ||| |||||||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 1158 TGGACACGATCCTGTTCTTGATCAATACAAAGTAGTTTGCACTGTTGCAGTATCCTCAAA 1217 Query 630 AAG-GCTTAAGAGGATAACCTCAGAGCATTGGGTCTTCGTACTAGAACCAGGAGGTTCGT 688 || | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1218 AAAAG-TTAAGAGGATAACCTCAGAGCATTGGGTCTTCGTACTAGAACCTGGAGGTTCGT 1276 Query 689 GGAAAAGAATTGAATTCGATCAACCTCATCTCCCTACGAGACTAGGATTGTGCGTCAATG 748 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| | Sbjct 1277 GGAAAAGAATTGAGTTCGATCAACCTCATCTCCCTACGAGACTAGGATTGTGCATCAAGG 1336 Query 749 GAGTTATATATTATTTGGCTTCCACTTGGAAGCGTCGTGATATCGTTGTCAGTTTTGACG 808 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | Sbjct 1337 GAGTTATATATTATTTGGCTTCCACTTGTAAGCGTCGCGATATCGTTGTCAGTTTTGATG 1396 Query 809 TTCGGTCTGAAGAGTTCAGTATGATCCAAGGACCTCTTAAGGTGTCTGCATTTTCTGAGT 868 |||||||||||||||||||||||||||||||||||| | |||| |||| | | |||| Sbjct 1397 TTCGGTCTGAAGAGTTCAGTATGATCCAAGGACCTCCTGTGGTGCCTGCGTATGGTGAGC 1456 Query 869 CTGTGGGATTTATAGAGTATGGTGGAAAACCAGCTGTTTTTGATTATACCATGATGAAAC 928 |||||||||||||||||||||||||||||||||||||| ||||| ||||||| || ||| Sbjct 1457 CTGTGGGATTTATAGAGTATGGTGGAAAACCAGCTGTTGTTGATCATACCATTTTGGAAC 1516 Query 929 AAACGGGTTTGGTGGACTTGTGGGTCTTGGAAGATGCTGGAAAATGGTCAAGGAAATCTC 988 |||| ||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct 1517 AAACAGGTTTAGTGGACTTATGGGTTTTGGAAGATGCTGGAAAATGGTCGAGGAAATCTC 1576 Query 989 TGGTTTTGCAGCCTTGTCAGATGCATTTAGTCGATAATGACATTG-AGTTTAATG-TGGA 1046 | ||||||||||||||||||||||| ||||| ||||| ||||| | || | || || | Sbjct 1577 TCGTTTTGCAGCCTTGTCAGATGCACTTAGTAGATAACAACATTCCA-TTGA-TGGTGCA 1634 Query 1047 AGGTACAACTCAAAACGGCGAGGTTATC 1074 |||||||||||||||||||||||||||| Sbjct 1635 AGGTACAACTCAAAACGGCGAGGTTATC 1662 > Ahg358465 jgi|Araly1|358465|fgenesh1_pg.C_scaffold_8002252 Length=1428 Score = 845 bits (457), Expect = 0.0 Identities = 812/977 (83%), Gaps = 50/977 (5%) Strand=Plus/Plus Query 85 agaagaagaatagaagaCGCTTTGG-TCGCGCCGGAGATCCCTCTCGATCTACTGATCGA 143 ||||||||| || |||| |||| |||| ||||||| ||| | ||||| | |||||| Sbjct 4 AGAAGAAGACGAGGGGACG-ATTGGTTCGCATCGGAGATTCCTTTGGATCTCCAGATCGA 62 Query 144 GATTCTGACTAAATTGCCTGCTAAATCTCTTATGAGATTCAAGTGCGTCTCAAAGTTATG 203 |||||||| || ||||||||||||||| || ||||| ||||||||||| |||||| | || Sbjct 63 GATTCTGATTAGATTGCCTGCTAAATCGCTGATGAGGTTCAAGTGCGTTTCAAAGCTCTG 122 Query 204 GTCTTCTCTTATCCGTTCCCGATTTTTTAGCAACT-GTTATCTTACGGTCAAAACTCCAC 262 || |||||||||||||| |||| ||||||||| | ||||||||||||| | |||| Sbjct 123 GTTTTCTCTTATCCGTTGTCGATATTTTAGCAA-TCGTTATCTTACGGTGGCTTCCCCAC 181 Query 263 GGCGACCACCTCGTCTATACATGAGTTTGGTAGACCACCTCTTGTGTAATTCACT-GATG 321 |||| ||||||||||||||||||||||||| |||||| || |||||||||| | || Sbjct 182 CGCGAGCACCTCGTCTATACATGAGTTTGGTGGACCACATCCAGTGTAATTCAATGGA-A 240 Query 322 GTTTGCCACT-ACCCAT-GTGAGTCTGTACTGCTGTC---GTC-T-A--G--TAG--CAG 368 || ||| | | |||| | | ||||||||| |||| || || | | | ||| | | Sbjct 241 GTCTGCTA-TAACCC-TCGCGAGTCTGTATTGCTATCATTATCATCATCGTCTAGTACTG 298 Query 369 -TGCTGAGTCTTTGGAACAAAATTTGACAATTG-CAGGGATGGGAGGACGCAACATGGTG 426 ||| ||||||| | ||| ||||||||| || ||||||||||||||||||||||| || Sbjct 299 ATGCAAAGTCTTTCCACCAAGATTTGACAA-TGCCAGGGATGGGAGGACGCAACATGATG 357 Query 427 GTTCTTCGCGGCTTGATTCTATACGTTGTTTGCAGAACGGCGTCTATCTATAATCCCACC 486 ||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||| Sbjct 358 ATTCTTCGCGGCTTGATTCTATACATTGTTTGCAGAAAGGCGTGTATCTATAATCCCACC 417 Query 487 ACCAGACAAAGTGTAACCTTACCTGCTGTCAAATCCAACATCCTTGCTCAA-AA-A-TCC 543 ||||||||| ||||||||||||| || ||| |||||||||| |||||||| || | | Sbjct 418 ACCAGACAATGTGTAACCTTACCCGCCGTCCAATCCAACATTTTTGCTCAAGAAGATTAT 477 Query 544 CACTGGAATAGTCTCCTCTACTTTTTCGGATACGATCCTGTTCTTGATCAATACAAAGTA 603 || | || ||| ||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct 478 CA-T--AAGAGTGTCCTCTACTTTTTAGGACACGATCCTGTTCTTGATCAATACAAAGTA 534 Query 604 GTTTGCACTGTTGCACTATTCTCAAAAAGGCTTAAGAGGATAACCTCAGAGCATTGGGTC 663 ||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 535 GTTTGCACTGTTGCAGTATCCTCAAAAAGGTTTAAGAGGATAACCTCAGAGCATTGGGTC 594 Query 664 TTCGTACTAGAACCAGGAGGTTCGTGGAAAAGAATTGAATTCGATCAACCTCATC-TCCC 722 |||||||||||||| ||||||||||||||||||||||| || |||| ||||||| ||| Sbjct 595 TTCGTACTAGAACCCGGAGGTTCGTGGAAAAGAATTGAGTTTGATCTACCTCATTGTCC- 653 Query 723 TACGA-GACTAGGATTGTGCGTCAATGGAGTTATATATTATTTGGCTTCCACTTGGAAG- 780 | | | |||||||| ||||| |||| ||||| ||||||| |||||||||| |||| | | Sbjct 654 TGC-ACGACTAGGACTGTGCATCAACGGAGTCATATATTTTTTGGCTTCCGCTTGTATGT 712 Query 781 CGTCGTGATATCGTTGTCAGTTTTGACGTTCGGTCTGAAGAGTTCAGTATG-ATCCAAGG 839 | | | |||||| ||||||||||||| ||| |||||||||||||| ||| |||||||| Sbjct 713 C-TAGCGATATCCTTGTCAGTTTTGATGTTATGTCTGAAGAGTTCAA-ATGGATCCAAGG 770 Query 840 ACCTCTTAAGGTGTCTGCATTTTCTGAGTCTGTGGGATTTATAGAGTATGGTGGAAAACC 899 ||||| | | |||||||||| || | |||| |||||||||||| ||||||||| Sbjct 771 ACCTCCTGTCGCGTCTGCATTTA---AGCCCATGGGTTTTATAGAGTATCTTGGAAAACC 827 Query 900 AGCTGTTTTTGATTATACC-ATGATGAAAC--AAACGGGTTTGGTGGACTTGTGGGTCTT 956 | ||||||||||| || || || | |||| ||| || || |||||||| |||||||| Sbjct 828 ATCTGTTTTTGATCATTCCCATCTT-AAACGCAAA-GG-TTCCGTGGACTTATGGGTCTT 884 Query 957 GGAAGATGCTGGAAAATGGTC-AAGGAAATCTCTGGTTTTGCAGCCTTGTCAGATGCATT 1015 ||||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||| Sbjct 885 GGAAGATGCTGGAAAATGGTCGAAG-AAATCCCTGGTTTTGCAGCCTTGTCAGATGCATT 943 Query 1016 TAGTCGATAATGACATT 1032 |||| ||||| || ||| Sbjct 944 TAGTTGATAA-GAAATT 959 Score = 311 bits (168), Expect = 8e-84 Identities = 359/448 (80%), Gaps = 26/448 (6%) Strand=Plus/Plus Query 551 ATAGTCTCCTCTACTTTTTCGGATACGATCCTGTTCTTGATCAATACAAAGTAGTTTGCA 610 ||||| |||||||||| || ||| |||||||||||||||||||||||||||||||||| | Sbjct 986 ATAGTGTCCTCTACTTCTTGGGACACGATCCTGTTCTTGATCAATACAAAGTAGTTTGTA 1045 Query 611 CTGTTG---CA-CTATTCT-CAAAAAGGCTTA-AGAGGATAACCTCAGAGCATTGGGTCT 664 | ||| || | || || || || | || | | ||||| || ||||||||||||| Sbjct 1046 ATTTTGTGTCATC-AT-CTTCACAA-GATTTGGACATGATAAACTTGGAGCATTGGGTCT 1102 Query 665 TCGTACTAGAACCAGGAGGTTCGTGGAAAAGAATTGAATTCGATCAACCTCATCTCCCTA 724 ||||||||||| |||| ||| ||||||||||| || || |||||||||||| | ||| Sbjct 1103 TCGTACTAGAAGTTGGAGATTCTTGGAAAAGAATAGAGTTTGATCAACCTCATATATCTA 1162 Query 725 CGAGAC-TAGGATTGTGCGTCAATGGAGTTATATATTAT-TTGGCTTCCACTTGGAAGCG 782 | |||| | ||| ||||| || |||||||||||||||| ||| ||| |||| | | | Sbjct 1163 CAAGACCT-GGACTGTGCATCGGTGGAGTTATATATTATCTTG-CTTTCACTAGTATGTT 1220 Query 783 TCGTG-ATATCGTTGTCAGTTTTGACGTTCGGTCTGAAGAGTTCAGTATGATCCAAG-GA 840 | | | ||||||||||||| ||||||||| | |||||||| || | || ||||||| | Sbjct 1221 T-GAGGATATCGTTGTCAGCTTTGACGTTAGATCTGAAGAATTTAACATAATCCAAGCG- 1278 Query 841 CCTCTTAAGGTGTCTGCATTT-TCTGAG-TCTGTGGGATTTATAGAGTATGGTGGAAAAC 898 |||||| ||||||||||| | | || | ||| |||| ||||||||||||||||| |||| Sbjct 1279 CCTCTTGTGGTGTCTGCATATGT-TG-GCTCTCTGGGTTTTATAGAGTATGGTGGGAAAC 1336 Query 899 CAGCTGTTTTTGATTATACCA-TGATGAAACAAA-CGGGTTTGGTGGACTTGTGGGTCTT 956 ||||| ||||| || |||| | | | ||| ||| ||| |||||||||||| |||||||| Sbjct 1337 CAGCTATTTTTTATCATACTAGTCTT-AAAGAAAACGG-TTTGGTGGACTTATGGGTCTT 1394 Query 957 GGAAGATGCTGGAAAATGGTCAAGGAAA 984 |||| |||||||||| ||||| |||||| Sbjct 1395 GGAA-ATGCTGGAAACTGGTCGAGGAAA 1421 > Ahg918030 jgi|Araly1|918030|Al_scaffold_0008_2781 Length=1491 Score = 684 bits (370), Expect = 0.0 Identities = 587/689 (85%), Gaps = 26/689 (4%) Strand=Plus/Plus Query 355 TCGTCTAGTAGCAG-TGCTGAGTCTTTGGAACAAAATTTGACAATTG-CAGGGATGGGAG 412 |||||||||| | | ||| ||||||| | ||| ||||||||| || |||||||||||| Sbjct 709 TCGTCTAGTA-CTGATGCAAAGTCTTTCCACCAAGATTTGACAA-TGCCAGGGATGGGAG 766 Query 413 GACGCAACATGGTGGTTCTTCGCGGCTTGATTCTATACGTTGTTTGCAGAACGGCGTCTA 472 ||| ||||||| || ||||||||||||||||||||||| |||||||||||| ||||| || Sbjct 767 GACACAACATGATGATTCTTCGCGGCTTGATTCTATACATTGTTTGCAGAAAGGCGTGTA 826 Query 473 TCTATAATCCCACCACCAGACAAAGTGTAACCTTACCTGCTGTCAAATCCAACATCCTTG 532 ||||||||||||||||||||||| | ||||||||||| || |||||||||||||| ||| Sbjct 827 TCTATAATCCCACCACCAGACAATGCGTAACCTTACCCGCCGTCAAATCCAACATTTTTG 886 Query 533 CTCAAAAATCCCACT-GGAATAGTCTCCTCTACTTTTTCGGATACGATCCTGTTCTTGAT 591 ||||| || | | | | || ||| ||||||||||||| ||| ||||||||||||||||| Sbjct 887 CTCAAGAAGACTA-TCGTAAGAGTGTCCTCTACTTTTTAGGACACGATCCTGTTCTTGAT 945 Query 592 CAATACAAAGTAGTTTGCACTGTTGCACTATTCTCAAAAAGGCTTAAGAGGATAACCTCA 651 ||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||| Sbjct 946 CAATACAAAGTAGTTTGCACTGTTGCAGTATCCTCAAAAAGGTTTAAGAGGATAACCTCA 1005 Query 652 GAGCATTGGGTCTTCGTACTAGAACCAGGAGGTTCGTGGAAAAGAATTGAATTCGATCAA 711 ||||||||||||||||| |||||||| ||||||||||||||||||||||| || |||| | Sbjct 1006 GAGCATTGGGTCTTCGTCCTAGAACCCGGAGGTTCGTGGAAAAGAATTGAGTTTGATCTA 1065 Query 712 CCTCATC-TCCCTACGA-GACTAGGATTGTGCGTCAATGGAGTTATATATTATTTGGCTT 769 |||||| ||| | | | |||||||| ||||| |||| ||||| ||||||| |||||||| Sbjct 1066 CCTCATTGTCC-TGC-ACGACTAGGACTGTGCATCAACGGAGTCATATATTTTTTGGCTT 1123 Query 770 CCACTTGGAAG-CGTCGTGATATCGTTGTCAGTTTTGACGTTCGGTCTGAAGAGTTCAGT 828 || |||| | | | | | |||||| ||||||||||||| ||| |||||||||||||| Sbjct 1124 CCGCTTGTATGTC-TAGCGATATCCTTGTCAGTTTTGATGTTATGTCTGAAGAGTTCAA- 1181 Query 829 ATG-ATCCAAGGACCTCTTAAGGTGTCTGCATTTTCTGAGTCTGTGGGATTTATAGAGTA 887 ||| ||||||||||||| | | |||||||||| || | |||| ||||||||||| Sbjct 1182 ATGGATCCAAGGACCTCCTGTCGCGTCTGCATTTA---AGCCCATGGGTTTTATAGAGTA 1238 Query 888 TGGTGGAAAACCAGCTGTTTTTGATTATACC-ATGATGAAAC--AAACGGGTTTGGTGGA 944 | |||||||||| ||||||||||| || || || | |||| ||| || || ||||| Sbjct 1239 TCTTGGAAAACCATCTGTTTTTGATCATTCCCATCTT-AAACGCAAA-GG-TTCCGTGGA 1295 Query 945 CTTGTGGGTCTTGGAAGATGCTGGAAAATGGTC-AAGGAAATCTCTGGTTTTGCAGCCTT 1003 ||| ||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||| Sbjct 1296 CTTATGGGTCTTGGAAGATGCTGGAAAATGGTCGAAG-AAATCCCTGGTTTTGCAGCCTT 1354 Query 1004 GTCAGATGCATTTAGTCGATAATGACATT 1032 |||||||||||||||| ||||| || ||| Sbjct 1355 GTCAGATGCATTTAGTTGATAA-GAAATT 1382 > Ahg358451 jgi|Araly1|358451|fgenesh1_pg.C_scaffold_8002238 Length=978 Score = 497 bits (269), Expect = 6e-140 Identities = 533/656 (81%), Gaps = 36/656 (5%) Strand=Plus/Plus Query 61 ATGTTGagaagaggaagaaaaagaagaagaagaatagaagaCGCTTTGGTCGCGCCGGAG 120 ||| |||||||||||||||||||||||||| ||| || || || |||||| ||||||||| Sbjct 1 ATGATGAGAAGAGGAAGAAAAAGAAGAAGACGAAGAGGAGGCGATTTGGTAGCGCCGGAG 60 Query 121 ATCCCTCTCGATCTACTGATCGAGATTCTGACTAAATTGCCTGCTAAATCTCTTATGAGA 180 || || | ||||| | ||||||||||||||||| ||||||||||||||| || ||||| Sbjct 61 ATTACTTTGGATCTCCAGATCGAGATTCTGACTAGATTGCCTGCTAAATCGCTGATGAGG 120 Query 181 TTCAAGTGCGTCTCAAAGTTATGGTCTTCTCTTATCCGTTCCCGATTTTTTAGCAACTGT 240 |||||||||||||||||| |||| ||||||||||||| |||||||| ||||||||||||| Sbjct 121 TTCAAGTGCGTCTCAAAGCTATGTTCTTCTCTTATCCTTTCCCGATATTTTAGCAACTGT 180 Query 241 TATCTTACGGTCAAAACTCCAC-G-G-CGACCACCTCGTCTATACATGAGTTTGGTAGAC 297 |||||||||||| | |||||| | | | ||||||||| ||||||||||||||||| ||| Sbjct 181 TATCTTACGGTCGCATCTCCACTGCGACCACCACCTCGCCTATACATGAGTTTGGTGGAC 240 Query 298 CACCTCTTGTGTAATTC-ACTGATGGTTTGCCACTACCCATGTGAGTCTGTACTGCTGTC 356 || | ||||| ||| || || ||| |||||| |||| | |||||||||||||| || Sbjct 241 CA---CGAGTGTAGTTCAAC-GAAGGTCTGCCACAACCCCCGCGAGTCTGTACTGCTATC 296 Query 357 GTCTAGT-AGCA-GTGCTGAGTCTTTGGAACAAAATTTGAC-A--ATTGC-AGGGATGGG 410 | || | | || | || || ||| || ||| ||||||| | | ||| ||||||||| Sbjct 297 AT-TA-TCATCATCTTCT-AG--TTTCGACCAAGATTTGACGACCA-TGCAAGGGATGGG 350 Query 411 AGGACGCAACATGGTGGTTCTTCGCGGCTTGATTCTATACGTTGTTTGCAGAACGGCGTC 470 |||||||||||||||| ||||||| ||||||||| ||||| |||||||| ||| |||| Sbjct 351 AGGACGCAACATGGTGATTCTTCGTGGCTTGATTTTATACATTGTTTGCGGAAAAGCGTG 410 Query 471 TATCTATAATCCCACCACCAGACAAAGTGTAACCTTACCTGCTGTCAAATCCAACATCCT 530 |||||||||||||||||||||||| || ||||||||||| || |||||| ||||||| | Sbjct 411 TATCTATAATCCCACCACCAGACAGAGCGTAACCTTACCCGCCATCAAATTCAACATCTT 470 Query 531 TGCTCAA--AAATCCCACTGGAATAGTCTCCTCTACTTTTTCGGATACGATCCTGTTCTT 588 | |||| |||| || || || | |||||||| || ||| |||||||||||||| Sbjct 471 TATTCAAGGAAAT--GAC---CATTGTGTACTCTACTTCTTGGGACACGATCCTGTTCTT 525 Query 589 GATCAATACAAAGTAGTTTGCACTGTTG---CA-CTATTCT-CAAAAAGGCTTA-AGAGG 642 |||||||||||||||||||| | | ||| || | || || || || | || | | | Sbjct 526 GATCAATACAAAGTAGTTTGTAATTTTGTGTCATC-AT-CTTCACAA-GATTTGGACATG 582 Query 643 ATAACCTCAGAGCATTGGGTCTTCGTACTAGAACCAGGAGGTTCGTGGAAAAGAAT 698 |||| || |||||||||||||| ||||||||| |||| ||| ||||||||||| Sbjct 583 ATAAACTTGGAGCATTGGGTCTTTGTACTAGAAGTTGGAGATTCTTGGAAAAGAAT 638 Score = 281 bits (152), Expect = 6e-75 Identities = 255/303 (84%), Gaps = 14/303 (5%) Strand=Plus/Plus Query 787 GATATCGTTGTCAGTTTTGACGTTCGGTCTGAAGAGTTCAGTATGATCCAAG-GACCTCT 845 |||||||||||||| ||||||||| | |||||||| || | || ||||||| | ||||| Sbjct 652 GATATCGTTGTCAGCTTTGACGTTAGATCTGAAGAATTTAACATAATCCAAGCG-CCTCT 710 Query 846 TAAGGTGTCTGCAT-TTTCTGAG-TCTGTGGGATTTATAGAGTATGGTGGAAAACCAGCT 903 | ||||||||||| | | || | ||| |||| ||||||||||||||||| ||||||||| Sbjct 711 TGTGGTGTCTGCATATGT-TG-GCTCTCTGGGTTTTATAGAGTATGGTGGGAAACCAGCT 768 Query 904 GTTTTTGATTATACCATG-ATGAAA-CAAACGGGTTTGGTGGACTTGTGGGTCTTGGAAG 961 ||||| || |||| | | | ||| |||| |||||||||||||| |||||||||||| Sbjct 769 ATTTTTTATCATACTA-GTCTTAAAGAAAAC-GGTTTGGTGGACTTATGGGTCTTGGAAA 826 Query 962 ATGCTGGAAAATGGTCAAGGAAATCTCTG-GTTTTGCAGCCTTGTCAGATGCATTTAGTC 1020 |||||||||| ||||| | || |||| || | ||||||||||| |||| ||||||||||| Sbjct 827 ATGCTGGAAACTGGTCGATGAGATCTTTGAG-TTTGCAGCCTTCTCAGTTGCATTTAGTC 885 Query 1021 GATAATGACATTGAGTTT-AATGTGGAAGGTACAACTCAAAACGGCGAGGTTATCTTGGC 1079 ||||| |||||||| ||| | ||||||||||||||||||||||||||||||||||||| Sbjct 886 GATAACGACATTGA-TTTGACGGTGGAAGGTACAACTCAAAACGGCGAGGTTATCTTGGT 944 Query 1080 ACC 1082 ||| Sbjct 945 ACC 947 > Ahg951049 jgi|Araly1|951049|scaffold_802936.1 Length=637 Score = 361 bits (195), Expect = 8e-99 Identities = 443/558 (79%), Gaps = 35/558 (6%) Strand=Plus/Plus Query 492 ACAAAGTGTAACCTTACCTGCTGTCAAATCCAACATCCTTGCTCAA--AAATCCCACTGG 549 |||||| ||||||||||| || |||||| ||||||| ||| |||| |||| | | Sbjct 92 ACAAAGCGTAACCTTACCCGCCATCAAATTCAACATCTTTGTTCAAGGAAAT--GA-T-- 146 Query 550 AATAGTCTCCTCTACTTTTTCGGATACGATCCTGTTCTTGATCAATACAAAGTAGTTTGC 609 ||||| |||||||||| || ||| |||||||||||||||||||||||||||||||||| Sbjct 147 CATAGTGTCCTCTACTTCTTGGGACACGATCCTGTTCTTGATCAATACAAAGTAGTTTGT 206 Query 610 ACTGTTG---CA-CTATTCT-CAAAAAGGCTTA-AGAGGATAACCTCAGAGCATTGGGTC 663 | | ||| || | || || || || | || | | ||||| || |||||||||||| Sbjct 207 AATTTTGTGTCATC-AT-CTTCACAA-GATTTGGACATGATAAACTTGGAGCATTGGGTC 263 Query 664 TTCGTACTAGAACCAGGAGGTTCGTGGAAAAGAATTGAATTCGATCAACCTCATCTCCCT 723 || ||||||||| |||| ||| ||||||||||| || || |||||||||||| | || Sbjct 264 TTTGTACTAGAAGTTGGAGATTCTTGGAAAAGAATAGAGTTTGATCAACCTCATATATCT 323 Query 724 ACGAGAC-TAGGATTGTGCGTCAATGGAGTTATATATTAT-TTGGCTTCCACTTGGAAGC 781 || |||| | ||| ||||| || |||||||||||||||| ||| ||| |||| | | | Sbjct 324 ACAAGACCT-GGACTGTGCATCGGTGGAGTTATATATTATCTTG-CTTTCACTAGTATGT 381 Query 782 GTCGTG-ATATCGTTGTCAGTTTTGACGTTCGGTCTGAAGAGTTCAGTATGATCCAAG-G 839 | | | ||||||||||||| ||||||||| | |||||||| || | || ||||||| | Sbjct 382 TT-GAGGATATCGTTGTCAGCTTTGACGTTAGATCTGAAGAATTTAACATAATCCAAGCG 440 Query 840 ACCTCTTAAGGTGTCTGCATTT-TCTGAG-TCTGTGGGATTTATAGAGTATGGTGGAAAA 897 |||||| ||||||||||| | | || | ||| |||| ||||||||||||||||| ||| Sbjct 441 -CCTCTTGTGGTGTCTGCATATGT-TG-GCTCTCTGGGTTTTATAGAGTATGGTGGGAAA 497 Query 898 CCAGCTGTTTTTGATTATACCA-TGATGAAACAAA-CGGGTTTGGTGGACTTGTGGGTCT 955 |||||| ||||| || |||| | | | ||| ||| ||| |||||||||||| ||||||| Sbjct 498 CCAGCTATTTTTTATCATACTAGTCTT-AAAGAAAACGG-TTTGGTGGACTTATGGGTCT 555 Query 956 TGGAAGATGCTGGAAAATGGTCAAGGAAATCTCTG-GTTTTGCAGCCTTGTCAGATGCAT 1014 ||||| |||||||||| ||||| |||||| || || |||| |||||||| |||| ||| | Sbjct 556 TGGAAAATGCTGGAAACTGGTCGAGGAAAGCTTTGAGTTT-GCAGCCTTCTCAGCTGC-T 613 Query 1015 TTAGTCGATAATGACATT 1032 ||||| ||||| |||||| Sbjct 614 TTAGTTGATAACGACATT 631 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 42507052455 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5