BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G65010.2
Length=2071
Score E
Sequences producing significant alignments: (Bits) Value
Ahg496723 jgi|Araly1|496723|fgenesh2_kg.8__2539__AT5G65010.2 3201 0.0
Ahg940494 jgi|Araly1|940494|scaffold_601038.1 1982 0.0
> Ahg496723 jgi|Araly1|496723|fgenesh2_kg.8__2539__AT5G65010.2
Length=2049
Score = 3201 bits (1733), Expect = 0.0
Identities = 1966/2075 (95%), Gaps = 30/2075 (1%)
Strand=Plus/Plus
Query 1 CATTGTTATTTGTTTTCGTTGCCACTCTAACACAATGTGTGGGATTCTCGCTGTTCTTGG 60
||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1 CATTGTTGTTTGTTTTCGTTGCCACACTAACACAATGTGTGGGATTCTCGCTGTTCTTGG 60
Query 61 TTGCATCGACAACTCTCAAGCTAAACGTTCTCGTATCATCGAACTCTCTCGCAGATTGAG 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTGCATCGACAACTCTCAAGCTAAACGTTCTCGTATCATCGAACTCTCTCGCAGATTGAG 120
Query 121 GCACAGAGGTCCTGATTGGAGTGGACTCCATTGTTATGAAGATTGTTATCTTGCCCATGA 180
||| ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 121 GCATAGAGGTCCTGATTGGAGTGGACTCCATTGTTATGAAGGTTGTTATCTTGCTCATGA 180
Query 181 GCGTTTAGCCATCATTGACCCTACTTCAGGAGACCAACCTCTCTATAACGAAGACAAGAC 240
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 181 ACGTTTAGCCATCATTGACCCTACTTCTGGAGACCAACCTCTCTATAACGAAGACAAGAC 240
Query 241 CGTCGCTGTCACTGTAAATGGAGAGATATACAACCACAAGATTTTGCGTGAAAAGCTTAA 300
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 241 CGTCGCTGTCACTGTCAATGGAGAGATATACAACCATAAGATTTTGCGTGAAAAGCTAAA 300
Query 301 GTCTCATCAGTTCCGTACTGGTAGTGACTGTGAAGTGATTGCACATCTTTACGAAGAACA 360
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 301 GTCTCATCAATTCCGTACTGGTAGTGACTGTGAAGTGATTGCACATCTTTATGAAGAACA 360
Query 361 TGGAGAGGAATTTATCGACATGTTGGATGGAATGTTCGCGTTTGTCCTTCTTGATACTCG 420
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 361 TGGAGAGGAATTTATCGACATGTTAGATGGAATGTTCGCGTTTGTCCTTCTTGATACTCG 420
Query 421 CGACAAAAGTTTTATTGCTGCAAGGGACGCTATTGGTATCACTCCACTTTACATTGGATG 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 421 CGACAAAAGTTTTATTGCTGCAAGGGACGCGATTGGTATCACTCCACTTTACATTGGATG 480
Query 481 GGGTCTTGATGGTTCTGTCTGGTTTGCTTCGGAGATGAAAGCGCTTAGTGATGATTGTGA 540
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 481 GGGTCTTGATGGTTCTGTCTGGTTTGCTTCCGAGATGAAAGCTCTTAGTGATGATTGTGA 540
Query 541 ACAGTTTATGTCTTTTCCTCCTGGCCACATCTACTCAAGTAAACAAGGAGGGCTTAGGAG 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 ACAGTTTATGTCTTTTCCTCCTGGCCACATCTACTCAAGTAAACAAGGAGGGCTTAGGAG 600
Query 601 GTGGTACAATCCTCCGTGGTACAATGAGCAGGTTCCTTCAACCCCATATGATCCTTTAGT 660
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 601 GTGGTACAATCCTCCGTGGTACTCTGAGCAGGTTCCTTCAACCCCATATGATCCTTTAGT 660
Query 661 TCTGCGCAATGCTTTCGAGAAGGCTGTAATAAAGAGACTTATGACTGATGTGCCTTTTGG 720
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 661 TCTGCGCAATGCTTTCGAGAAGGCTGTAGTAAAGAGACTTATGACTGATGTGCCTTTTGG 720
Query 721 AGTTCTCCTATCTGGAGGATTGGACTCGTCTCTCGTTGCTGCAGTAGCATTACGCCATTT 780
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 721 AGTTCTCCTATCTGGAGGATTGGACTCGTCTCTTGTTGCTGCAGTAGCATTACGCCATTT 780
Query 781 GGAAAAATCAGAAGCTGCTCGTCAATGGGGTTCACAATTGCACACGTTTTGCATCGGTTT 840
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 781 GGAAAAATCGGAAGCTGCTCGTCAATGGGGTTCACAATTGCACACGTTTTGCATCGGATT 840
Query 841 GCAGGGATCGCCAGATCTTAAAGCTGGCAGAGAAGTTGCTGACTATCTTGGAACACGCCA 900
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 841 GCAGGGATCGCCAGATCTTAAAGCTGGCAGAGAAGTCGCTGACTATCTTGGAACACGCCA 900
Query 901 CCACGAGTTTCAGTTTACAGTTCAGGACGGGATAGACGCGATAGAGGAAGTCATTTACCA 960
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 901 CCACGAGTTTCAGTTTACTGTTCAGGACGGGATAGATGCGATAGAGGAAGTCATTTACCA 960
Query 961 TATTGAGACTTATGACGTTACTACAATAAGAGCTAGCACCCCAATGTTTCTTATGTCCAG 1020
||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct 961 TATTGAGACCTATGACGTGACTACAATAAGAGCTAGCACCCCAATGTTTCTTATGTCAAG 1020
Query 1021 AAAAATTAAATCTTTAGGTGTAAAGATGGTTCTTTCTGGGGAAGGTTCTGATGAAATACT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1021 AAAAATTAAATCTTTAGGTGTAAAGATGGTTCTTTCTGGGGAAGGTTCTGATGAAATTCT 1080
Query 1081 GGGGGGATACTTGTACTTCCATAAGGCTCCCAACAAGAAAGAATTTCATGAAGAAACATG 1140
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1081 CGGGGGATACTTGTACTTCCATAAGGCGCCCAACAAGAAAGAATTTCATGAAGAAACATG 1140
Query 1141 CCGAAAGATCAAAGCTCTCCACCAATTTGATTGTTTGAGAGCTAACAAATCAACTTCTGC 1200
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1141 CCGAAAGATCAAGGCTCTCCACCAGTTTGATTGTTTGAGAGCTAACAAATCAACTTCTGC 1200
Query 1201 GTGGGGTGTCGAAGCTCGTGTGCCTTTCCTAGATAAAGAATTTTTAAATGTTGCAATGAG 1260
|||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||
Sbjct 1201 GTGGGGTGTCGAAGCTCGTGTGCCTTTCCTAGATAAAGAATTCTTGAATGTCGCAATGAG 1260
Query 1261 CATCGATCCAGAGTGGAAGTTGATCAAGCCTGATCTCGGAAGGATCGAGAAGTGGGTGCT 1320
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 CATCGATCCAGAGTGGAAGATGATCAAGCCTGATCTCGGAAGGATCGAGAAGTGGGTGCT 1320
Query 1321 ACGCAATGCCTTTGATGATGAAGAACGACCTTATCTACCAAAGCACATTCTATATAGACA 1380
|||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||
Sbjct 1321 ACGCAATGCCTTTGATGATGAACAACGACCTTATCTACCAAAGCATATTCTGTATAGACA 1380
Query 1381 GAAAGAACAGTTTAGTGATGGAGTTGGGTATAGCTGGATAGATGGTCTGAAAGATCATGC 1440
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1381 AAAAGAACAGTTTAGTGATGGAGTTGGGTATAGCTGGATTGATGGTCTGAAAGATCATGC 1440
Query 1441 AAATAAACATGTCTCTGATACTATGCTGTCAAACGCAAGCTTTGTCTTCCCGGATAACAC 1500
||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1441 AAACAAACATGTCTCTGATACTATGCTGTCGAACGCAAGCTTTGTCTTCCCCGATAACAC 1500
Query 1501 ACCTCTGACAAAAGAAGCGTACTACTACAGAACCATCTTCGAGAAGTTCTTCCCGAAGCA 1560
|||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |||||
Sbjct 1501 ACCTCTGACAAAAGAAGCTTACTACTACAGAACCATCTTCGAAAAGTTCTTCCCTAAGCA 1560
Query 1561 GAGTGCTGCTAGAGCGACTGTACCAGGAGGTCCAAGTATAGCTTGCAGTACCGCGAAAGC 1620
||||||||| || ||||| ||||||||||| ||||||||||||||||||||||| |||||
Sbjct 1561 GAGTGCTGCAAGGGCGACAGTACCAGGAGGGCCAAGTATAGCTTGCAGTACCGCAAAAGC 1620
Query 1621 TGTAGAATGGGATGCAACTTGGTCAAAGAATCTTGATCCGTCAGGCCGTGCGGCTCTTGG 1680
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 TGTGGAATGGGATGCTACTTGGTCAAAGAATCTTGATCCGTCAGGCCGTGCGGCTCTTGG 1680
Query 1681 AGTTCATGTTGCAGCTTATGAAGAGGATAAAGCAGCTGCTGCTGCTAAGGCTGGATCGGA 1740
||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||
Sbjct 1681 AGTCCATGTTGCAGCTTATGAAGAGGATAAAGCTGCTGCTGCTGCTAAGGTTGGATCAGA 1740
Query 1741 TTTAGTAGATCCTCTTCCTAAGAATGGAACATAAGAGAACAACACTACAGGCATTGAGGA 1800
|| ||||||| ||| ||||||||||||| ||||||||||| | |||| | |||
Sbjct 1741 TTCAGTAGATTCTC--CCTAAGAATGGAATATAAGAGAACA-C--TACA---A---AGGT 1789
Query 1801 TATAAGCAAATGTTTTATTCTTCTACACAGAGAGATCGTTATCTTCTAGAGGGATCAATG 1860
| ||| | | |||||||| |||| ||| |||||||||||||||||||||||
Sbjct 1790 T-TAA-----T-T------CTTCTACAGAGAGTGAT-GTTATCTTCTAGAGGGATCAATG 1835
Query 1861 AATAAAAGCTTCGTCCATTTCTAGCTGGAGATTCCATGGATCTCCAGTTAGTGCAA-GTG 1919
||||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||| |||
Sbjct 1836 AATAAAAGCTTCGTCCATTTCTATCTGAAGATTACATGGATCTCCAGTTACTGCAAAGTG 1895
Query 1920 ATACACGTTGTCTACATTTGTACCTAAGTTTCTGCATTTTTTGTCGTTCTTTTGTGTT-- 1977
||||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 1896 ATACACGATGCCTACATTTGTACCTAAGTTTCTGCATGTTTTGTCGTTCTTGTGTGTTTT 1955
Query 1978 AGACAAGTCTTGGACCCTAGATGATACTTCAGTTTCTTAGACGTTAAATTTGATGAATCC 2037
|||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 1956 AGACAAGTATTGGACCCTAGATGATACTTCATTTTCTTAGAAGTTAAATTTGATGAATCC 2015
Query 2038 GAACTTGTT-TGATTTCAAAGCCTGGCCTTTCTGC 2071
|||| |||| | ||| ||||| |||||||||||||
Sbjct 2016 GAACATGTTCT-ATTACAAAGTCTGGCCTTTCTGC 2049
> Ahg940494 jgi|Araly1|940494|scaffold_601038.1
Length=1782
Score = 1982 bits (1073), Expect = 0.0
Identities = 1490/1692 (88%), Gaps = 25/1692 (1%)
Strand=Plus/Plus
Query 31 CACAATGTGTGGGATTCTCGCTGTTCTT-GGTTGCATCGACAACTCTCAAGCTAAACGTT 89
||| |||||||||||||| |||| | || || ||| | || |||||||||||||||||||
Sbjct 22 CACCATGTGTGGGATTCTTGCTG-TGTTAGGCTGCGTTGATAACTCTCAAGCTAAACGTT 80
Query 90 CTCGTATCATCGAACTCTCTCGCAGATTGAGGCACAGAGGTCCTGATTGGAGTGGACTCC 149
| |||||||||||||||||||||||||||||||| ||||||||||| |||||||| || |
Sbjct 81 CCCGTATCATCGAACTCTCTCGCAGATTGAGGCATAGAGGTCCTGACTGGAGTGGGCTAC 140
Query 150 ATTGTTATGAAGATTGTTATCTT-GCCCATGAGCGTTTAGCCATCATTGACCCTACTTCA 208
|||||| ||| ||||||||| || || ||||||||||| || ||| ||||||| |||||
Sbjct 141 ATTGTTTTGAGGATTGTTAT-TTGGCTCATGAGCGTTTGGCTATCGTTGACCCCACTTCT 199
Query 209 GGAGACCAACCTCTCTATAACGAAGACAAGACCGTCGCTGTCACTGTAAATGGAGAGATA 268
||||| ||||| |||||||||||||| |||||| | |||||||| || ||||||||||||
Sbjct 200 GGAGATCAACCACTCTATAACGAAGATAAGACCATTGCTGTCACGGTCAATGGAGAGATA 259
Query 269 TACAACCACAAGATTTTGCGTGAAAAGCTTAAGTCTCATCAGTTCCGTACTGGTAGTGAC 328
|||||||||||| |||||||||||| || |||||||| ||||| |||||||| |||||
Sbjct 260 TACAACCACAAGGCTTTGCGTGAAAATCTGAAGTCTCACCAGTTTCGTACTGGGAGTGAT 319
Query 329 TGTGAAGTGATTGCACATCTTTACGAAGAACATGGAGAGGAATTTATCGACATGTTGGAT 388
|||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||
Sbjct 320 TGTGAAGTGATTGCCCATCTTTATGAAGAACATGGAGAGGAATTTGTCGACATGTTGGAC 379
Query 389 GGAATGTTCGCGTTTGTCCTTCTTGATACTCGCGACAAAAGTTTTATTGCTGCAAGGGAC 448
|| ||||| || ||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct 380 GGCATGTTTGCATTTGTCCTTCTTGATTCCCGAGACAAAAGTTTTATTGCTGCAAGGGAT 439
Query 449 GCTATTGGTATCACTCCACTTTACATTGGATGGGGTCTTGATGGTTCTGTCTGGTTTGCT 508
|| ||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct 440 GCCATTGGTATCACTCCACTCTACATTGGGTGGGGTCTCGATGGTTCTGTCTGGTTTGCT 499
Query 509 TCGGAGATGAAAGCGCTTAGTGATGATTGTGAACAGTTTATGT-CTTTTCCTCCTGGCCA 567
|||||||||||||| |||||||||||||||||||||||||||| ||| || || |||||
Sbjct 500 TCGGAGATGAAAGCACTTAGTGATGATTGTGAACAGTTTATGTGCTTCCCC-CCAGGCCA 558
Query 568 CATCTACTCAAGTAAACAAGGAGGGCTTAGGAGGTGGTACAATCCTCCGTGGTACAATGA 627
|||||| |||||||||||||| |||||||||||||||||||| || ||||||| | |||
Sbjct 559 CATCTATTCAAGTAAACAAGGTGGGCTTAGGAGGTGGTACAACCCCCCGTGGTTCTCTGA 618
Query 628 GCAGGTTCCTTCAACCCCATATGATCCTTTAGTTC-TGCGCAATGCTTTCGAGAAGGCTG 686
| |||||||||||||||||||||||| || || |||||||| |||| ||||||||||
Sbjct 619 GTTGGTTCCTTCAACCCCATATGATCCCCTA-TTGGTGCGCAATACTTTTGAGAAGGCTG 677
Query 687 TAATAAAGA-GACTTATGACTGATGTGCCTTTTGGAGTTCTCCTATCTGGAGGATTGGAC 745
| ||||| | |||| |||||||||||||||||||| || ||||||||||||||||| |||
Sbjct 678 TTATAAA-ACGACTAATGACTGATGTGCCTTTTGGTGTCCTCCTATCTGGAGGATTAGAC 736
Query 746 TCGTCTCTCGTTGCTGCAGTAGCATTACGCCATTTGGAAAAATCAGAAGCTGCTCGTCAA 805
|| || || |||||| ||||||| ||||||||| |||||||||||||||||||| ||||
Sbjct 737 TCATCCCTTGTTGCTTCAGTAGCGTTACGCCATCTGGAAAAATCAGAAGCTGCTTGTCAG 796
Query 806 TGGGGTTCACAA-TTGCACACGTTTTGCATCGGTTTGCAGGGATCGCCAGATCTTAAAGC 864
||||||||| || |||||||| ||||| ||||||||| ||||||| || ||||| |||||
Sbjct 797 TGGGGTTCA-AAGTTGCACACATTTTGTATCGGTTTGAAGGGATCCCCGGATCTGAAAGC 855
Query 865 TGGCAGAGAAGTTGCTGACTATCTT-GGAACACGCCACCACGAGTTTCAGTTTACAGTTC 923
|||||||||||| ||||||||| || ||||| |||||||| ||||| || |||||||| |
Sbjct 856 TGGCAGAGAAGTCGCTGACTAT-TTAGGAACTCGCCACCATGAGTTACACTTTACAGTCC 914
Query 924 AGGACGGGATAGACGCGATAGAGGAAGTCATTTACCATATTGAGACTTATGACGTTACTA 983
||||||| ||||| || ||||| |||||||| |||||| ||||||| |||||||| ||||
Sbjct 915 AGGACGGAATAGATGCCATAGAAGAAGTCATATACCATGTTGAGACCTATGACGTAACTA 974
Query 984 CAATAAGAGCTAGCACCCCAATGTTTCTTATGTCCAGAAAAATTAAATCT-TTAGGTGTA 1042
| |||||||| ||||| ||||||||||| ||||| |||||||| ||||| || ||||||
Sbjct 975 CTATAAGAGCCAGCACTCCAATGTTTCTAATGTCGAGAAAAATCAAATCGCTT-GGTGTA 1033
Query 1043 AAGATGGTTCTTTCTGGGGAAGGTTCTGATGAAATACTGGGGGGATACTTGTACTTCCAT 1102
||||||||||||||||||||||| ||||||||||| | || ||||| ||||||||||||
Sbjct 1034 AAGATGGTTCTTTCTGGGGAAGGCTCTGATGAAATTTTTGGAGGATATTTGTACTTCCAT 1093
Query 1103 AAGGCTCCCAACAAGAAAGAATTTCATGAAGAAACATGCCGAAAGATCAAAGCTCTCCAC 1162
|| || ||||||||||| |||||||| || |||||||| ||||||||||||||||| ||
Sbjct 1094 AAAGCACCCAACAAGAAGGAATTTCACGAGGAAACATGTCGAAAGATCAAAGCTCTTCAT 1153
Query 1163 CAATTTGATTGTTTGAGAGCTAACAAATCAACTTCTGCGTGGGGTGTCGAAGCTCGTGTG 1222
|||| |||||| |||||||||||||||||||||||||| |||||||| || || |||||
Sbjct 1154 CAATATGATTGCTTGAGAGCTAACAAATCAACTTCTGCATGGGGTGTTGAGGCCCGTGTA 1213
Query 1223 CCTTTCCTAGATAAAGAATTT-TTAAATGTTGCAATGAGCATCGATCCAGAGTGGAAGTT 1281
|||||||| |||||||||||| |||| ||| ||||||||||||||||||||||||||| |
Sbjct 1214 CCTTTCCTGGATAAAGAATTTATTAA-TGTCGCAATGAGCATCGATCCAGAGTGGAAGAT 1272
Query 1282 GATCAAGCCTGATCTCGGAAGGATCGAGAAGTGGGTGCTACGCAATGCCTTTGATGATGA 1341
||| | ||||||| | |||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 1273 GATTAGGCCTGATTTGGGAAGGATCGAGAAATGGGTGTTACGCAATGCCTTTGATGATGA 1332
Query 1342 AGAACGA-CCTTATCTACCAAAGCACATTCTATATAGACAGAAAGAACAGTTTAGTGATG 1400
||| | ||||| ||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1333 -GAAAAATCCTTACCTACCAAAGCACATTCTATATAGGCAGAAAGAACAGTTCAGTGATG 1391
Query 1401 GAGTTGGGTATAGCTGGATAGATGGTCTGAAAGATCATGCAAATAAACATGTCTCTGATA 1460
||||||| || |||||||| |||||||| ||||| ||||| || |||||||||||||| |
Sbjct 1392 GAGTTGGATACAGCTGGATTGATGGTCTAAAAGAACATGCGAACAAACATGTCTCTGACA 1451
Query 1461 CTATGCTG-TCAAACGCAAGCTTTGTCTTCCCGGATAACACACCTCTGACAAAAGAAGCG 1519
| |||||| | || |||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 1452 CAATGCTGATGAA-CGCAAGCTTTGTCTTCCCTGATAACACACCTTTGACAAAAGAAGCT 1510
Query 1520 TACTACTACAGAACCATCTTCGAGAAGTTCTTCCCGAAGCAGAGTGCTGCTAGAGCGACT 1579
|||||||||||||||||||| || ||||||||||| ||| || |||||||||||| |||
Sbjct 1511 TACTACTACAGAACCATCTTTGAAAAGTTCTTCCCTAAG-AG--TGCTGCTAGAGCAACT 1567
Query 1580 GTACCAGGAGGTCCAAGTATAGCTTGCAGTACCGCGAAAGCTGTAGAATGGGATGCAACT 1639
|||||||||||||||||| | || || ||||| || |||||||| |||||||| ||| ||
Sbjct 1568 GTACCAGGAGGTCCAAGTGTGGCATGTAGTACAGCAAAAGCTGTGGAATGGGACGCAGCT 1627
Query 1640 TGGTCAAAGAATCTTGATCCGTCAGGCCGTGCGGCTCTTGGAGTTCATGTTGCAGCTTAT 1699
|||||| |||||||||| || ||||| |||||||||||||||||||||||| ||||||||
Sbjct 1628 TGGTCACAGAATCTTGACCCATCAGGTCGTGCGGCTCTTGGAGTTCATGTTTCAGCTTAT 1687
Query 1700 GAAGAGGATAAA 1711
| || ||||||
Sbjct 1688 GGGGAAGATAAA 1699
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77894551025
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5