BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G65450.1
Length=2196
Score E
Sequences producing significant alignments: (Bits) Value
Ahg332761 jgi|Araly1|332761|fgenesh1_pm.C_scaffold_8002104 3247 0.0
Ahg942513 jgi|Araly1|942513|scaffold_603057.1 573 2e-162
Ahg927851 jgi|Araly1|927851|scaffold_300308.1 457 2e-127
Ahg942514 jgi|Araly1|942514|scaffold_603058.1 318 9e-86
Ahg927993 jgi|Araly1|927993|scaffold_300450.1 274 2e-72
Ahg942505 jgi|Araly1|942505|scaffold_603049.1 196 5e-49
> Ahg332761 jgi|Araly1|332761|fgenesh1_pm.C_scaffold_8002104
Length=2196
Score = 3247 bits (1758), Expect = 0.0
Identities = 2072/2218 (93%), Gaps = 44/2218 (2%)
Strand=Plus/Plus
Query 1 ATGATGTTGGTTTTTCTTCTGATTCGCCGGCAATGGAGATCTGCTTCTGTGAGAAGAGAA 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1 ATGATGTTGGTTTTTCTTCTGATTCGTCGGCAATGGAGATCTGCTTCTGTGAGGAGAGAG 60
Query 61 GAGGTGATTCGTCTCATTGCTTTAGCCACCGAGGAATCTTATTTGGCGGAGGAAGTTCGT 120
|| || |||||||||||||||||||||||||| ||||||||| |||||||||| ||||||
Sbjct 61 GAAGTTATTCGTCTCATTGCTTTAGCCACCGAAGAATCTTATCTGGCGGAGGAGGTTCGT 120
Query 121 CCCGCCACTGTTGATTACGGCGGAGACTCGGTTTCTGATGTTTACCGTTGTGCCGTTTGT 180
|| |||||||||| | |||||||| |||||||| ||||| || ||||||
Sbjct 121 GCCTCCACTGTTGA-T-----------TCGGTTTCGGATGTTTATCGTTGCGCTGTTTGT 168
Query 181 CTATACCCTACCACTACTCGTTGCTCTCAGTGCAAATCTGTTCGTTACTGTTCAAGCAAG 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 169 CTCTACCCTACCACTACTCGTTGCTCTCAGTGCAAATCTGTTCGTTACTGTTCAAGCAAG 228
Query 241 TGTCAAATTCTTCACTGGCGACGAGGTCATAAGGAAGAATGTCGATCGCCTGATTATGAT 300
|||||| ||||||| ||||||||||| ||||| ||||||||||||||||| ||||| |||
Sbjct 229 TGTCAATTTCTTCATTGGCGACGAGGCCATAAAGAAGAATGTCGATCGCCAGATTACGAT 288
Query 301 GAAGAAAAGGAGGAGTATGTTCAATCTGATTATGATGCTAAAGAGTCTAATGTGGATTTT 360
|||||||||||||||| |||| |||||||| ||||||| |||||||| ||| ||||||||
Sbjct 289 GAAGAAAAGGAGGAGTCTGTTAAATCTGATGATGATGCAAAAGAGTCGAATATGGATTTT 348
Query 361 CCATCTCGTGGGACTGCGTATGAATCAT---C---A-T---CT--AATGTGTCTGTTGAT 408
|| |||||||||||||||| |||||||| | | | || |||||||||||||||
Sbjct 349 CCGTCTCGTGGGACTGCGTTTGAATCATCAGCAGAAGTACCCTCAAATGTGTCTGTTGAT 408
Query 409 GTTGCCTGTGATATGTCTACAAGTAGGCCTAGTATTCATAAAGTGCAACCTAGATCTGAA 468
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 409 GTTGCCTGTGATATGTCTACAAGTAGGCCTAGTATTCATAAACTGCAAGCTAGATCTGAA 468
Query 469 GCTGTGGATTTCACTACTTCTTTAAACATAAAGGATAATCTCTATGAGACCAGGCCACTA 528
||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||
Sbjct 469 GCTGTGGATTTCACTACTTCTTTTAACTTAAAGGATAATCTCTATGAGACCAGGCCACTT 528
Query 529 AGTAGGAAGAAATCACGTAATCGTACAGACAAGGTTGAGTCAGCCAGTAATTATTCCAAA 588
|||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||
Sbjct 529 AGTAGGAAGAAATCACGTAATCGTACAGACAAGGTTGAATCAGCGAGAAATTATTCCAAA 588
Query 589 GGAAAGACTGATGCAAAGCTGCGGAAACTTGGCAATCAAAATTCACGTAGGTCAGGTGAT 648
||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||| |
Sbjct 589 GGAAAGACTGATGCAAAGCCGCGGAAACTTGGCAATCAAAATTCTCGTAAGTCAGGTGGT 648
Query 649 TCGGCT-AATATGTCAATTTCAGATCAATTTTTGTCAGTTG--G-GTTTGAAGAAGAAAT 704
|||||| || ||||||||| ||||||||||||||||||||| | || ||||||||||||
Sbjct 649 TCGGCTGAA-ATGTCAATTACAGATCAATTTTTGTCAGTTGATGAGTATGAAGAAGAAAT 707
Query 705 GAATGCACTTAAACATGAAAGAATTACATCTGAACCATCTAGTGCTTCTGCTGCAATGTC 764
|||||| || |||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 708 AAATGCATTTGAACACGGAAGAATTACATCTGAACCATCTAGTGCTTCTGCTGCAATG-- 765
Query 765 TTCGTCTTCAACTCTTCTCCTACCTTCAAAAGCTAACAGTAAGCCAAAAGTGTCACAAGC 824
|| ||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 766 -TCATCTTCAACTGTTCTCCTACCTTCTAAAGCTAATAGTAAGCCAAAAGTGTCACAAGC 824
Query 825 TTCAAGTAGTGGATTGAAAACATCGGTGCAGAAAGTTGTTCAGCATTTTAGACCTCC-AC 883
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 825 TTCAAGTAGTGGATTGAAAACATCGGTGCAGAAAGTTGTTCAGCATTTTAGACC-CCGAC 883
Query 884 AGTCGTCCAAAAA-GTCTCAACCTTCCAGTTCTATTGATGAGATGAGCTTCTCGTATGAG 942
||||||| ||||| || |||||||||||||||||||||||||||||||||||| ||||||
Sbjct 884 AGTCGTC-AAAAATGTTTCAACCTTCCAGTTCTATTGATGAGATGAGCTTCTCATATGAG 942
Query 943 TTGTTTGTGAAACTTTATTGTGATAGAGTAGAATTACAGCCATTTGGCCTTGTGAACTTA 1002
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 943 TTGTTTGTGAAACTTTATTGTGATAAAGTAGAATTACAGCCATTTGGTCTTGTGAACTTA 1002
Query 1003 GGGAACAGTTGTTATGCAAATGCTGTCCTTCAGTGCTTGGCATTCACTCGGCCACTGATA 1062
|| |||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1003 GGAAACAGTTGCTATGCAAATTCTGTCCTTCAGTGCTTGGCATTCACTCGGCCACTTATA 1062
Query 1063 TCATACCTTATTAGGGGATTACACTCTAAAACATGTAGAAAGAAGAGTTGGTGTTTTGTT 1122
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1063 TCATACCTTAGTAGGGGATTACACTCTAAAACATGTAGAAAGAAGAGTTGGTGTTTTGTT 1122
Query 1123 TGTGAGTTTGAACACTTAATTTTAAAGGCAAGGGGAGGAGAATCTCCTCTT-TCACCTAT 1181
|||||||||||||| |||||||||||||||||||||||| |||||||| || || |||||
Sbjct 1123 TGTGAGTTTGAACATTTAATTTTAAAGGCAAGGGGAGGATAATCTCCT-TTATCCCCTAT 1181
Query 1182 CAAGATCTTATCAAAATTACAAAAGATTGGGAAGCATCTTGGCCCTGGAAAAGAAGAAGA 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1182 CAAGATCTTATCAAAATTACAAAAGATTGGGAAGCATCTTGGCCCTGGAAAAGAAGAAGA 1241
Query 1242 CGCGCACGAGTTTTTAAGGTGTGCTGTTGATACAATGCAATCTGTTTTTCTCAAAGAGGC 1301
||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1242 CGCACACGAGTTTTTAAGGTGTGCTGTTGAGACAATGCAATCTGTTTTTCTCAAAGAGGC 1301
Query 1302 TCCTGCAGCTGGTCCGTTTGCTGAAGAAACTACTTTAGTAGGCCTTACGTTTGGTGGATA 1361
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1302 TCCTGCAGCTGGTCCGTTTGCTGAAGAGACTACTTTAGTAGGCCTTACGTTTGGTGGATA 1361
Query 1362 TCTTCACTCCAAGATTAAATGCATGGCATGCCTCCACAAATCTGAGCGACCGGAGCTGAT 1421
||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1362 TCTTCACTCCAAGATTAAATGCATGAAATGCCTCCACAAATCTGAGCGATCGGAGCTGAT 1421
Query 1422 GATGGATCTAACTGTTGAGATTGATGGGGATATAGGAAGCCTCGAAGAAGCACTTGCTCA 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1422 GATGGATCTAACTGTTGAGATTGATGGGGATATAGGAAGCCTCGAAGAAGCACTTGCTCA 1481
Query 1482 ATTCACAGCATACGAAGTCCTAGATGGAGAGAACCGGTATTTCTGTGGCAGATGTAAATC 1541
||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1482 ATTTACAGCATACGAAGTCCTAGATGGAGAGAACCGGTACTTCTGTGGCAGATGTAAATC 1541
Query 1542 TTACCAGAAAGCCAAAAAGAAATTGATGATATTGGAAGGACCCAATATTCTTACTGTCGT 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1542 TTACCAGAAAGCCAAAAAGAAATTGATGATATTGGAAGGACCCAATATTCTTACTGTTGT 1601
Query 1602 GCTGAAACGTTTTCAGTCTGATAACTTTGGGAAGCTGAGCAAACCCATCCATTTTCCCGA 1661
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1602 GCTAAAACGTTTTCAGTCTGATAATTTTGGGAAGCTGAGCAAACCCATCCATTTTCCTGA 1661
Query 1662 GCTTCTCGATATTAGCCCGTATATGAGTGACCCAAATCATGGGGATCATCCGGTTTATAG 1721
||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||
Sbjct 1662 GCTTCTCGATATTAGCCCGTATATGAGTGACCCAAATCACGGAGATCATCCCGTGTATAG 1721
Query 1722 TCTCTACGCAGTGGTGGTCCATTTGGATGCTATGAGCACTTTATTTTCAGGTCATTATGT 1781
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1722 TCTCTACGCAGTGGTGGTCCATTTGGATGCTATGAGCACTTCATTTTCAGGTCATTATGT 1781
Query 1782 TTGCTACATAAAAACCCTTGATGGAGATTGGTTCAAAATTGATGACAGCAATGTTTTCCC 1841
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |
Sbjct 1782 TTGCTACATAAAAACCCTTCATGGAGACTGGTTCAAAATTGATGACAGCAATGTTTTTCG 1841
Query 1842 GGTTCAGTTAGAGACTGTGTTACTAGAAGGAGCATACATGCTTCTTTATGCAAGGGATTC 1901
|||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct 1842 GGTTCAATTAGAGACTGTATTACTAGAAGGAGCATACATGCTTCTTTATGCAAGAAATTC 1901
Query 1902 TCCGAGACCGGTGAGCAAGAACGGTGGTCGGAAATCAAAGCAAAGAAGAAATTTGGCCGC 1961
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct 1902 TCCGAGACCGGTGAGCAAGAACGGTGGTCGGAAATCAAAGGAAAGAAGAAATTTGGCTGC 1961
Query 1962 AATTCCGTCAAGAAAGGGCAACAAGAAACAGAGAGACGGTGATAATAACAGTTTGTTGCC 2021
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1962 AATTCCGTCAAGAAA---CAACAAGAAACAGAGAGACAGTGATAATAACAGTTTGTTGCC 2018
Query 2022 GCGTGTGGACTGGTCGAGTGGAAGCCTGTCGTCAATGTTTAGCTCATCGGACACAACAAG 2081
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 2019 GCGTGTGGACTGGTCGAGTGGAAGTCTATCGTCAATGTTTAGCTCATCGGACACAACAAG 2078
Query 2082 CTCATGTAGCACAAAAGACTCATCAGGTATTGAGAATTTATCAGATTACCTGTTTGGTGG 2141
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2079 CTCATGTAGCACAAAAGACTCATCAGGTATTGAGAATTGATCAGATTACCTGTTTGGTGG 2138
Query 2142 AGTTGAACCGGTTTGGAAATGGGATCGTCATAATAAATCT-CA--AACGTTTGATTGA 2196
||||||||||||||||||| |||||| |||| || |||| | ||||||| |||||
Sbjct 2139 AGTTGAACCGGTTTGGAAACGGGATCTTCATGATTCATCTGCTCTAACGTTTTATTGA 2196
> Ahg942513 jgi|Araly1|942513|scaffold_603057.1
Length=645
Score = 573 bits (310), Expect = 2e-162
Identities = 451/515 (88%), Gaps = 25/515 (5%)
Strand=Plus/Plus
Query 1012 TGTTATGCAAATGCTGTCCTTCAGTGCTTGGCATTCACTCGGCCACTGATATCATACCTT 1071
||||||||| ||| ||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 120 TGTTATGCAGATGTTGTCCTTCAGTGCTTGGCATTCACTCGGCTACTAATATCATACCTT 179
Query 1072 ATTAGGGGATTACACTCTAAAACATGTAGAAAGAA-GAGTTGGTGTTTTGTTTGTGAGTT 1130
|||||||||||||||||||||||||||| ||| || ||||||||||||||| ||||||||
Sbjct 180 ATTAGGGGATTACACTCTAAAACATGTA-AAAAAACGAGTTGGTGTTTTGTATGTGAGTT 238
Query 1131 TGAACACTTAATTTTAAAGGCAAGGGGAGGAGAATCTCCTCTTTCACCTATCAAGATCTT 1190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 TGAACACTTAATTTTAAAGGCAAGGGGAGGAGAATCTCCTCTTTCACCTATCAAGATCTT 298
Query 1191 ATCAAAATTACAAAAGATTGGGAAGCATCTTGGCCCTGGAAAAGAAGAAGACGCGCACGA 1250
||| |||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||
Sbjct 299 ATCTAAATTACAAAAGATTGGGAATAATCTTAGCCCTGGAAAACAAGAAAAAGCACACGA 358
Query 1251 GTTTTTAAGGTGTGCTGTTGATACAATGCAATCTGTTTTTCTCAAAGAGGCTCCTGCAGC 1310
||||||||||| ||||||||| |||||||||| |||||||||||||||||||| ||||||
Sbjct 359 GTTTTTAAGGTATGCTGTTGAGACAATGCAATATGTTTTTCTCAAAGAGGCTCATGCAGC 418
Query 1311 TGGTCCGTTTGCTGAAGAAACTACTTTAGTAGGCCTTACGTTTGGTGGATATCTTCACTC 1370
|||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct 419 TGGTCCGTTTGCTGAAGAAACTACTTTA-----C-----GTTTGGTGGATATCTTCACTC 468
Query 1371 CAAG--ATTAA-A-TG-CATGGCATGCCTCCACAAAT-C-TG-AGCGAC-CGGAGCTGAT 1421
|||| | || | | | |||| | |||| | | | | | | ||||||||
Sbjct 469 CAAGGCAGCAACAGTTTCTTGGCTTTAAGATT-AAATGCCTCCA-CAAATCTGAGCTGAT 526
Query 1422 GATGGATCTAACTGTTGAGATTGATGGGGATATAGGAAGCCTCGAAGAAGCACTTGCTCA 1481
||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 527 GATGGATCTCAGTGTAGAGATTGATGGGGATATAGGAAGCCTCGAAGAAGCACTTGCTCA 586
Query 1482 A-TTCACAGCATACGAAGTCCTAGATGGAGAGAAC 1515
| || | ||| ||||||||||||||||||||||||
Sbjct 587 AGTT-ATAGCCTACGAAGTCCTAGATGGAGAGAAC 620
> Ahg927851 jgi|Araly1|927851|scaffold_300308.1
Length=1143
Score = 457 bits (247), Expect = 2e-127
Identities = 279/294 (95%), Gaps = 4/294 (1%)
Strand=Plus/Plus
Query 968 GAGTAGAATTACAGCCATTTGGCCTTGTGAACTTAGGGAACAGTTGTTATGCAAATGCTG 1027
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 178 GAGTAGAATTACAGCCATATGGCCTTGTGAACTTATGGAACAGTTGTTATGCAAATGCTT 237
Query 1028 TCCTTCAGTGCTTGGCATTCACTCGGCCACTGA-TATCATACCTTATTAGGGGATTACAC 1086
||||||||||| |||||||||||| || || | ||||||||||||||||||||||||||
Sbjct 238 TCCTTCAGTGCCTGGCATTCACTCAGCTGCT-ATTATCATACCTTATTAGGGGATTACAC 296
Query 1087 TCTAAAACATGTAGAAAGAA-GAGTTGGTGTTTTGTTTGTGAGTTTGAACACTTAATTTT 1145
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCTAAAACATGTA-AAAGAATGAGTTGGTGTTTTGTTTGTGAGTTTGAACACTTAATTTT 355
Query 1146 AAAGGCAAGGGGAGGAGAATCTCCTCTTTCACCTATCAAGATCTTATCAAAATTACAAAA 1205
|||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 356 AAAGGCAAGGGGAGGAGAATATCCTCTTTCACCTATCAAGATCTTATCTAAATTACAAAA 415
Query 1206 GATTGGGAAGCATCTTGGCCCTGGAAAAGAAGAAGACGCGCACGAGTTTTTAAG 1259
|||||||||| |||||||||||||||||||||||||||| ||||||||||||||
Sbjct 416 GATTGGGAAGAATCTTGGCCCTGGAAAAGAAGAAGACGCACACGAGTTTTTAAG 469
> Ahg942514 jgi|Araly1|942514|scaffold_603058.1
Length=565
Score = 318 bits (172), Expect = 9e-86
Identities = 214/235 (91%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 1547 AGAAAGCCAAAAAGAAATTGATGATATTGGAAGGACCCAATATTCTTACTGTCGTGCTGA 1606
|||| |||||||||||||| |||||||||||||||||| || |||||||||||||| |||
Sbjct 1 AGAAGGCCAAAAAGAAATTAATGATATTGGAAGGACCCGATTTTCTTACTGTCGTGTTGA 60
Query 1607 AACGTTTTCAGTCTGATAACTTTGGGAAGCTGAGCAAACCCATCCATTTTCCCGAGCTTC 1666
|| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 61 AATGTTTTCAGTCGGATAACTTTGGGAAGCTGAGCAAACCCATCTATTTTCCCGAGCTTC 120
Query 1667 TCGATATTAGCCCGTATATGAGTGACCCAAATCATGGGGATCATCCGGTTTATAGTCTCT 1726
|||||||| ||||||||||||||| |||||||| | |||||||| || ||||| ||||
Sbjct 121 TCGATATTTTCCCGTATATGAGTGATACAAATCATAGTGATCATCCCGTGTATAGCCTCT 180
Query 1727 ACGCAGTGGTGGTCCATTTGGATGCTATGAGCACTTTATTTTCAGGTCATTATGT 1781
| |||||||| ||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 181 ATGCAGTGGTAGTCCATTTGGATGCTATGAACACTTCATTTTCAGGTCATTATGT 235
> Ahg927993 jgi|Araly1|927993|scaffold_300450.1
Length=650
Score = 274 bits (148), Expect = 2e-72
Identities = 175/187 (94%), Gaps = 5/187 (3%)
Strand=Plus/Plus
Query 917 TTGATGAGATGAGCTTCTCGTATGAG---TTGTTTGTGAAACTTTATTGTGATAGAGTAG 973
|||| || ||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 341 TTGAAGAAATGAGCTTCTCGTGTGAGTTATTGTTTGTGAAACTTTATTGTGATAGAGTAG 400
Query 974 AATTACAGCCATTTGGCCTTGTGAACTTAGGGAACAGTTGTTATGCAAATGCTGTCCTTC 1033
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 401 AATTACAGCCAGTTGGCCTTGTGAACTTAGGGAACAGTTGTTATGCAAATGCTGTCCTTC 460
Query 1034 AGTGCTTGGCATTCACTCGGCCACTGATATCATACCTTATTAGGGGATTACACTCTAA-A 1092
||| ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||| |
Sbjct 461 AGTTCTTGGCATTCACT-GGCCACTTATATCATACCCTATTAGGGGATTACACTCTAATA 519
Query 1093 ACATGTA 1099
|||||||
Sbjct 520 ACATGTA 526
> Ahg942505 jgi|Araly1|942505|scaffold_603049.1
Length=516
Score = 196 bits (106), Expect = 5e-49
Identities = 110/112 (98%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 1150 GCAAGGGGAGGAGAATCTCCTCTTTCACCTATCAAGATCTTATCAAAATTACAAAAGATT 1209
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 227 GCAAGGGGAGGAGAATCTCCTCTTTCACCTATCAAGATCTTATCAATATTACAAAAGATT 286
Query 1210 GGGAAGCATCTTGGCCCTGGAAAAGAAGAAGACGCGCACGAGTTTTTAAGGT 1261
||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 287 GGGAAGCATCTTGGCCCTGGAAAAGAAGAAGACGCACACGAGTTTTTAAGGT 338
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82655831650
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5