BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G65700.1 Length=3383 Score E Sequences producing significant alignments: (Bits) Value Ahg496807 jgi|Araly1|496807|fgenesh2_kg.8__2623__AT5G65700.1 5127 0.0 Ahg937778 jgi|Araly1|937778|scaffold_501969.1 2462 0.0 > Ahg496807 jgi|Araly1|496807|fgenesh2_kg.8__2623__AT5G65700.1 Length=3321 Score = 5127 bits (2776), Expect = 0.0 Identities = 3052/3186 (96%), Gaps = 15/3186 (0%) Strand=Plus/Plus Query 7 TCTCTACACTCACACCATCTCACAACCCTAATCTCTC-C-CAC-ACA-AGAGAGATAGAG 62 |||| |||||||||||||||||||||||||||||||| | ||| | | |||||||||||| Sbjct 1 TCTCGACACTCACACCATCTCACAACCCTAATCTCTCACACACAAGAGAGAGAGATAGAG 60 Query 63 AGAAACAATGAAACTTTTTCTTCTCCTTCTTTTTCTTCTCCACATTTCTCATACCTTCAC 122 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATAAACAATGAAACTTTTTCTTCTCCTTCTTTTTCTTCTCCACATTTCTCATACCTTCAC 120 Query 123 CGCAAGCCGACCAATCTCCGAGTTCCGTGCTCTCCTCTCACTCAAAACCTCTCTCACCGG 182 | ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct 121 CACAAGCCGACCAATCTCCGAGTTCCGTGCTCTTCTCTCACTCAAATCCTCTCTCACCGG 180 Query 183 CGCCGGAGATGACAAAAACTCGCCTCTCTCTTCCTGGAAAGTCTCAACAAGCTTCTGTAC 242 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 181 CGCCGGAGATGACAAAAACTCGCCTCTCTCCTCCTGGAAAGTCTCAACTAGCTTCTGTAC 240 Query 243 ATGGATTGGTGTCACGTGCGATGTATCTCGCCGTCACGTGACTTCTCTTGATCTCTCCGG 302 ||||| ||||||||||||||| || |||||||| ||||||||||||||||||||||| || Sbjct 241 ATGGACTGGTGTCACGTGCGACGTCTCTCGCCGGCACGTGACTTCTCTTGATCTCTCTGG 300 Query 303 TCTCAACCTCTCCGGTACTCTTTCCCCAGATGTTTCTCATTTACGTCTTCTTCAGAATCT 362 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 301 TCTTAACCTCTCCGGTACTCTTTCTCCAGATGTTTCTCATTTACGTCTTCTTCAGAATCT 360 Query 363 ATCACTCGCTGAAAATCTA-ATCTCCGGTCCGATTCCGCCGGAAATCTCGAGCCTTTCCG 421 || ||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 361 CTCGCTCGCTGAAAATC-AGATCTCCGGTCCGATTCCGCCGGAAATCTCGAGCCTTTCCG 419 Query 422 GTCTTCGTCACTTAAATCTCTCGAACAATGTCTTCAACGGTTCGTTTCCCGATGAGATTT 481 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct 420 GTCTTCGTCACTTAAATCTCTCAAACAATGCCTTCAACGGTTCGTTTCCCGATGAGATTT 479 Query 482 CTTCTGGATTGGTGAATCTCCGAGTTCTTGATGTCTACAACAACAATCTAACCGGAGATT 541 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 480 CATCTGGATTAGTGAATCTCCGAGTTCTTGATGTCTACAACAACAATCTAACCGGAGATT 539 Query 542 TACCGGTTTCCGTCACCAATCTGACTCAGCTCCGGCACCTTCACCTCGGTGGTAACTACT 601 |||| |||||||||||||||||||||||||||||||| |||||||| ||||| ||||||| Sbjct 540 TACCTGTTTCCGTCACCAATCTGACTCAGCTCCGGCATCTTCACCTGGGTGGGAACTACT 599 Query 602 TCGCTGGAAAGATCCCGCCTTCGTACGGAAGCTGGCCAGTTATTGAGTATC-TAGCGGTT 660 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||| Sbjct 600 TCGCTGGAAAGATCCCGCCTTCGTACGGAAGCTGGCCAGTTATTGAGTA-CTTAGCTGTT 658 Query 661 TCCGGCAACGAGCTTGTCGGGAAAATCCCTCCAGAGATCGGAAACCTAACGACTCTCCGG 720 |||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||| Sbjct 659 TCCGGCAACGAGCTCGTCGGAAAAATCCCTCCAGAGATCGGAAACCTAAAGACTCTCCGG 718 Query 721 GAGCTTTACATCGGCTACTACAACGCTTTCGAAGACGGTCTTCCTCCAGAGATCGGAAAT 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 GAGCTTTACATCGGCTACTACAACGCTTTCGAAGACGGTCTTCCTCCAGAGATCGGAAAT 778 Query 781 CTATCGGAGCTAGTCAGATTCGACGGAGCTAATTGCGGATTAACCGGTGAGATTCCGCCG 840 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 779 TTATCGGAGCTAGTCAGATTCGACGCCGCTAATTGCGGATTAACCGGTGAGATTCCGCCG 838 Query 841 GAGATTGGGAAGCTTCAGAAACTCGATACGCTTTTCTTGCAAGTGAATGTCTTCTCCGGT 900 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 839 GAGATCGGGAAGCTTCAGAAACTCGATACGCTTTTCTTGCAAGTGAATGTCTTCTCCGGT 898 Query 901 CCATTAACTTGGGAGCTAGGAACGCTATCGAGTTTAAAATCAATGGATTTGTCTAACAAC 960 || ||||||| ||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct 899 CCGTTAACTTTGGAGCTAGGAACGCTTTCGAGCTTGAAATCAATGGATTTGTCTAACAAC 958 Query 961 ATGTTCACCGGAGAGATTCCAGCGAGTTTCGCAGAGTTGAAGAATCTCACGCTTTTGAAT 1020 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 959 ATGTTCACCGGAGAGATTCCAGCGAGATTCGCAGAGTTGAAGAATCTCACGCTTTTGAAT 1018 Query 1021 CTCTTCCGTAACAAACTTCACGGCGAGATACCGGAGTTCATCGGAGATTTGCCGGAGCTT 1080 |||||| | ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 1019 CTCTTCAGAAACAAACTTCACGGCGAGATACCAGAGTTCATCGGAGAATTGCCGGAGCTT 1078 Query 1081 GAAGTGTTACAGCTTTGGGAGAACAATTTCACCGGAAGCATCCCGCAGAAATTAGGAGAA 1140 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 1079 GAAGTGTTACAGCTTTGGGAGAACAATTTCACCGGAAGCATCCCGCAGAAATTGGGGGAG 1138 Query 1141 AACGGTAAACTAAATCTCGTCGATCTCTCTTCCAATAAGCTGACCGGAACTTTACCGCCG 1200 ||||||||||| ||||||||||||||||||||||| || || |||||||||||||||||| Sbjct 1139 AACGGTAAACTCAATCTCGTCGATCTCTCTTCCAACAAACTCACCGGAACTTTACCGCCG 1198 Query 1201 AACATGTGCTCCGGTAACAAGTTAGAAACTTTAATCACTCTTGGAAACTTTCTCTTTGGT 1260 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1199 AACATGTGCTCCGGTAACAAGTTAGAAACTTTAATCACTCTTGGAAACTTTCTCTTTGGT 1258 Query 1261 TCAATCCCTGATTCTCTTGGTAAATGTGAGTCTTTGACCCGGATCCGAATGGGTGAGAAT 1320 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1259 TCAATCCCTGATTCTCTTGGCAAATGTGAGTCTTTGACCCGGATCCGAATGGGTGAGAAT 1318 Query 1321 TTCCTGAACGGGTCAATCCCAAAAGGACTATTCGGATTACCCAAATTAACTCAAGTGGAG 1380 ||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct 1319 TTCCTAAACGGGTCAATCCCTCAAGGATTATTCGGATTACCCAAATTAACTCAAGTGGAG 1378 Query 1381 CTCCAAGATAATTATCTCTCCGGAGAGTTACCAGTCGCCGGAGGTGTCTCTGTTAATCTT 1440 |||||||||||||||||||||||||| ||||| || |||||||||||||| || ||||| Sbjct 1379 CTCCAAGATAATTATCTCTCCGGAGAATTACCGGTTGCCGGAGGTGTCTCCGTCAATCTA 1438 Query 1441 GGTCAGATCAGTTTATCAAACAACCAGCTCTCAGGTCCATTACCTCCGGCGATCGGGAAC 1500 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 1439 GGTCAGATCAGTTTATCAAACAATCAGCTCTCAGGTCCATTACCTCCGGCGATCGGAAAC 1498 Query 1501 TTCACCGGCGTTCAGAAACTTCTTCTTGATGGAAACAAGTTCCAAGGTCCTATTCCTTCA 1560 |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| Sbjct 1499 TTCACCGGCGTTCAGAAACTTCTTCTTGATGGAAACAAGTTCGAAGGTCCGATTCCTTCG 1558 Query 1561 GAGGTAGGGAAGCTTCAGCAGCTCTCGAAGATTGATTTCAGCCACAACTTGTTCTCCGGT 1620 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1559 GAGGTAGGGAAGCTTCAGCAGCTCTCGAAGATTGATTTCAGCCACAACTTGTTCTCCGGT 1618 Query 1621 CGAATCGCGCCGGAGATTAGTCGTTGCAAGCTCTTAACGTTTGTTGATCTGAGCAGAAAC 1680 ||||||||||||||||| || ||||||||||||||||| |||||||||||||| |||||| Sbjct 1619 CGAATCGCGCCGGAGATCAGCCGTTGCAAGCTCTTAACTTTTGTTGATCTGAGTAGAAAC 1678 Query 1681 GAGCTCTCCGGTGAAATCCCAAATGAGATCACTGCTATGAAGATATTGAATTACTTGAAC 1740 |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct 1679 GAGCTCTCCGGTGAAATCCCAAATGAGATCACTGGTATGAAGATACTGAATTACTTGAAT 1738 Query 1741 CTGTCGAGAAACCATCTGGTTGGATCAATCCCTGGTTCAATCTCGTCAATGCAGAGCTTA 1800 |||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1739 CTGTCGAGAAACAATCTGGTTGGATCAATCCCTGGTTCGATCTCGTCAATGCAGAGCTTA 1798 Query 1801 ACATCTCTTGATTTCTCTTACAACAACCTCTCCGGTTTAGTTCCGGGAACAGGACAATTC 1860 ||||| |||||||||||||||||||| ||||||||||| |||||||| || ||||||||| Sbjct 1799 ACATCACTTGATTTCTCTTACAACAATCTCTCCGGTTTGGTTCCGGGCACTGGACAATTC 1858 Query 1861 AGTTACTTCAACTACACATCGTTCTTGGGTAATCCTGATCTCTGTGGTCCTTATCTTGGT 1920 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1859 AGTTACTTCAACTACACATCGTTCTTGGGTAATCCTGATCTCTGTGGTCCTTATCTTGGT 1918 Query 1921 CCTTGTAAAGACGGTGTTGCTAAAGGAGGTCACCAGAGTCATAGTAAAGGACCTTTATCA 1980 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1919 CCTTGTAAAGACGGTGTTGCTAAAGGAGCTCACCAGAGTCATAGTAAAGGACCTTTATCA 1978 Query 1981 GCTTCTATGAAGTTATTGCTTGTTCTTGGACTACTTGTTTGTTCGATTGCGTTCGCGGTA 2040 |||||||||||| ||||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct 1979 GCTTCTATGAAGCTATTGCTCGTCCTTGGACTACTCGTTTGTTCGATTGCATTCGCGGTA 2038 Query 2041 GTAGCCATAATCAAAGCTAGATCATTGAAAAAGGCGAGTGAGTCACGGGCTTGGAGGTTA 2100 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2039 GTAGCTATAATCAAAGCTAGATCATTGAAAAAGGCGAGCGAGTCACGGGCTTGGAGGTTA 2098 Query 2101 ACAGCTTTCCAGAGACTAGACTTCACGTGTGACGATGTCTTGGATTCTCTCAAAGAAGAC 2160 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 2099 ACAGCATTCCAGAGACTAGACTTCACATGTGACGATGTCTTGGATTCTCTCAAAGAAGAC 2158 Query 2161 AACATTATAGGCAAAGGAGGAGCTGGTATTGTCTATAAAGGCGTAATGCCTAATGGTGAT 2220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2159 AACATTATAGGCAAAGGAGGAGCTGGTATTGTCTATAAAGGCGTAATGCCTAATGGTGAT 2218 Query 2221 CTAGTCGCGGTTAAAAGACTCGCTGCAATGTCTCGTGGATCTTCCCATGATCACGGCTTC 2280 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct 2219 CTAGTCGCGGTCAAAAGACTCGCTGCAATGTCCCGTGGATCTTCCCATGATCACGGATTC 2278 Query 2281 AACGCAGAGATTCAAACCTTAGGAAGGATAAGACACAGACACATAGTGAGGCTTCTCGGA 2340 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2279 AACGCAGAGATTCAAACCTTAGGAAGGATAAGACACAGACACATAGTGAGGCTTCTCGGT 2338 Query 2341 TTTTGCTCAAACCACGAGACGAATCTACTTGTCTATGAGTACATGCCTAATGGTAGTCTC 2400 |||||||| |||||||| || |||||||| |||||||||||||||||||||||||||||| Sbjct 2339 TTTTGCTCTAACCACGAAACAAATCTACTAGTCTATGAGTACATGCCTAATGGTAGTCTC 2398 Query 2401 GGTGAGGTGCTTCACGGTAAGAAAGGAGGACACTTGCATTGGGACACACGTTACAAGATT 2460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2399 GGTGAGGTGCTTCACGGTAAGAAAGGAGGACACTTGCATTGGGACACACGTTACAAGATT 2458 Query 2461 GCTCTTGAAGCTGCTAAAGGACTCTGTTACCTTCATCACGATTGTTCTCCATTGATCGTT 2520 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct 2459 GCTCTTGAAGCTGCTAAAGGACTCTGTTATCTTCATCACGATTGTTCTCCATTGATTGTT 2518 Query 2521 CACAGAGATGTCAAATCAAACAACATCCTCCTTGATTCAAACTTTGAAGCTCATGTTGCT 2580 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 2519 CACAGAGATGTCAAATCAAACAACATCCTCCTCGATTCAAACTTTGAAGCTCATGTTGCT 2578 Query 2581 GACTTTGGTCTCGCTAAATTCCTTCAAGATTCCGGTACTTCTGAATGTATGTCTGCAATC 2640 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2579 GACTTTGGTCTCGCTAAATTCCTTCAAGATTCCGGTACTTCTGAATGTATGTCTGCAATC 2638 Query 2641 GCTGGCTCTTACGGCTACATAGCTCCAGAGTATGCGTATACGTTGAAGGTAGATGAGAAG 2700 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2639 GCTGGCTCTTACGGCTACATAGCTCCAGAGTATGCGTATACGTTGAAGGTAGATGAGAAG 2698 Query 2701 AGCGATGTGTATAGTTTCGGTGTGGTTCTTTTGGAACTCGTCACCGGAAGAAAACCTGTC 2760 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2699 AGCGATGTGTATAGTTTCGGTGTGGTTCTTTTGGAACTCGTCACCGGAAGAAAACCTGTC 2758 Query 2761 GGAGAATTTGGAGACGGTGTCGATATAGTGCAATGGGTTCGTAAAATGACTGATTCGAAC 2820 ||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 2759 GGAGAATTTGGTGACGGTGTCGACATTGTGCAATGGGTTCGTAAAATGACTGATTCGAAC 2818 Query 2821 AAGGATTCGGTTCTGAAAGTATTGGATCCGAGACTTTCTTCGATTCCGATTCATGAAGTG 2880 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 2819 AAAGATTCGGTTCTGAAAGTATTGGATCCGAGACTTTCATCGATTCCGATTCATGAAGTG 2878 Query 2881 ACGCACGTCTTCTATGTAGCGATGCTCTGTGTAGAAGAACAAGCTGTTGAGAGGCCGACT 2940 ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 2879 ACGCACGTCTTCTATGTCGCGATGCTCTGTGTCGAAGAACAAGCTGTTGAGAGGCCGACT 2938 Query 2941 ATGAGAGAAGTTGTTCAGATTCTCACTGAGATCCCGAAGTTGCCACCGTCGAAGGATCAG 3000 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2939 ATGAGGGAAGTTGTTCAGATTCTCACTGAGATCCCGAAGTTGCCACCGTCGAAGGATCAG 2998 Query 3001 CCGATGACGGAATCAGCGCCGGAGAGTGAGCTTTCGCCGAAGTCTGGTGTTCAAAGTCCG 3060 |||| |||||||||| ||||||||| |||||||||||||||||| |||| |||| ||||| Sbjct 2999 CCGACGACGGAATCAACGCCGGAGAATGAGCTTTCGCCGAAGTCCGGTGCTCAAGGTCCG 3058 Query 3061 CCGGATCTACTCAATCTATGAGAGTTTTCTGATT-CACGGCGGTTAATTTAGGGTACCGG 3119 ||||||||||||||||||||||||||||| |||| | |||||||| |||||||||||||| Sbjct 3059 CCGGATCTACTCAATCTATGAGAGTTTTCCGATTTC-CGGCGGTTGATTTAGGGTACCGG 3117 Query 3120 TATAAGGGGTAAATTTGTC-TTTTCATAAATGTTATTAGCGAT--GAGA--TTTGGTTGT 3174 ||||||||||||||||||| |||||||||||||| |||||| | |||| ||||||||| Sbjct 3118 TATAAGGGGTAAATTTGTCATTTTCATAAATGTTTTTAGCGTTAAGAGAGATTTGGTTGT 3177 Query 3175 TAATTT 3180 |||||| Sbjct 3178 TAATTT 3183 > Ahg937778 jgi|Araly1|937778|scaffold_501969.1 Length=3051 Score = 2462 bits (1333), Expect = 0.0 Identities = 2451/2983 (82%), Gaps = 108/2983 (4%) Strand=Plus/Plus Query 76 CTTTTTCTTCTCCTTCTTTTTCTTCTCCACATTTCTCATACCTTCACCGCAAGC-CGACC 134 ||| |||||||||| || | || ||||||||||||||| ||||||||| ||| ||| Sbjct 38 CTTCTTCTTCTCCTCCTCCTCCTCCTCCACATTTCTCATTCCTTCACCG-TAGCTAAACC 96 Query 135 AATCTCCGAGTTCCGTGCTCTCCTCTCACTCAAAACCTCTCTCACCGGCGCCGGAGATGA 194 |||| ||||| || ||||| |||||||||||| |||| |||||| || | || | Sbjct 97 AATCACCGAGCTCAACGCTCTTCTCTCACTCAAATCCTCCCTCACCATCGAC---GA--A 151 Query 195 CAAAAACTCGCCTCTCTCTTCCTGGAAAGTCTCAACAAGCTTCTGTACATGGATTGGTGT 254 | |||| |||||| | || ||||| | ||||||| ||||||| |||||| ||||| Sbjct 152 C----ACTCACCTCTCACCTCATGGAACCTTTCAACAACCTTCTGTTCATGGACCGGTGT 207 Query 255 CACGTGCGATGTATCTCGCCGTCACGTGACTTCTCTTGATCTCTCCGGTCTCAACCTCTC 314 ||||||||| || |||||||| |||||||| ||||| || ||||| ||||| |||||||| Sbjct 208 CACGTGCGACGTCTCTCGCCGGCACGTGACCTCTCTCGACCTCTCTGGTCTTAACCTCTC 267 Query 315 CGGTACTCTTTCC-CCAGATGTTTCTCATTTACGTCTTCTT-CAGAATCTATCACTCGCT 372 ||| ||||| ||| || || || ||||||||| || |||| |||||||||||||||||| Sbjct 268 CGGAACTCTCTCCTCC-GACGTAGCTCATTTACCTC-TCTTACAGAATCTATCACTCGCT 325 Query 373 GAAAATCTA-ATCTCCGGTCCGATTCCGCCGGAAATCTCGAGCCTTTCCG-GTCTTCGTC 430 | |||| | ||||| ||||| ||||||||||||||||| | |||| || | ||||||| Sbjct 326 GCTAATC-AGATCTCAGGTCCTATTCCGCCGGAAATCTCCAATCTTTACGAG-CTTCGTC 383 Query 431 ACT-TAAATCTCTCGAACAATGTCTTCAACGGTTCGTTTCCCGATGAGA-TTTCTTCTGG 488 | | | |||||||| || |||| |||||||||||| | ||||||||| | | || ||||| Sbjct 384 A-TCTCAATCTCTCCAATAATGGCTTCAACGGTTCATATCCCGATGA-ACTCTCCTCTGG 441 Query 489 ATTGGTGAATCTCCGAGTTCTTGATGTCTACAACAACAATC-TAACCGGAGATTTACCGG 547 ||||||||||||||| ||||| ||| | || |||||||| | |||||||||||||||||| Sbjct 442 ATTGGTGAATCTCCGTGTTCTCGATTTGTATAACAACAA-CTTAACCGGAGATTTACCGG 500 Query 548 TTTCCGTCACCAATCTGACTCAGCTCCGGCACCTTCACCTCGGTGGTAACTACTTCGCTG 607 |||| |||| |||||||||||||||||||| |||||||||||||| || |||||| | | Sbjct 501 TTTCAATCACTAATCTGACTCAGCTCCGGCATCTTCACCTCGGTGGGAATTACTTCTCCG 560 Query 608 G-AAAGATCCCGCCTTCGTACGGAAGCTGGCCAGTTATTGAGTATCTAGCGGTTTCCGGC 666 | ||| |||||| | ||||||||| |||||| ||| | |||||||||||||||||||| Sbjct 561 GTAAA-ATCCCGGCGACGTACGGAACCTGGCCTGTTCTCGAGTATCTAGCGGTTTCCGGT 619 Query 667 AACGAGCTTGTCGGGAAAATCCCTCCAGAGATCGGAAACCTAACGACTCTCCGGGAGCTT 726 |||||||| |||| ||||||||||| ||||||||||||||||||||||| || || ||| Sbjct 620 AACGAGCTAATCGGTAAAATCCCTCCGGAGATCGGAAACCTAACGACTCTTCGTGAACTT 679 Query 727 TACATCGGCTACTACAACGCTTTCGAAGACGGTCTTCCTCCAGAGATCGGAAATCTATCG 786 |||||||| || ||||||||||| ||||| |||||||| || ||||| |||||| | ||| Sbjct 680 TACATCGGATATTACAACGCTTTTGAAGATGGTCTTCCACCGGAGATTGGAAATTTGTCG 739 Query 787 GAGCTAG-TCAGATTCGACGGAGCTAATTGCGGATTAACCGGTGAGATTCCGCCGGAGAT 845 ||||| | || | ||||||| |||||||| || ||||||||||||||||| |||||||| Sbjct 740 GAGCTTGTTC-GGTTCGACGCTGCTAATTGTGGTTTAACCGGTGAGATTCCACCGGAGAT 798 Query 846 TGGGAAGCTTCAGAAACTCGATACGCT-TTTCTTGCAAGTGAATGTC-TTCTCCGGTCCA 903 ||||||||||||||| || |||||| | |||||| ||||| |||| | || || || || Sbjct 799 TGGGAAGCTTCAGAAGCTAGATACGTTGTTTCTT-CAAGTAAATG-CGTTTTCAGGGACA 856 Query 904 TTAACTTGGGAGCTAGGAACGCTATCGAGTTTAAAATCAATGGATTTGTCTAACAACATG 963 ||||||| ||||| ||| | || || || ||||||||||||||||||||||| ||| Sbjct 857 TTAACTTCAGAGCTGGGATTTATCTCAAGCTTGAAATCAATGGATTTGTCTAACAATATG 916 Query 964 TTCACCGGAGAGATTCCAGCGAGTTTCGCAGAGTTGAAGAATC-TCACGCTT-TTGAATC 1021 || ||||| |||||||| |||||||| || || ||||||| | | ||| || ||||||| Sbjct 917 TTTACCGGTGAGATTCCGGCGAGTTTTTCACAGCTGAAGAA-CTTAACG-TTGTTGAATC 974 Query 1022 TCTTCCGTAACAAACT-TCACGGCGAG-ATACCGGAGTTCATCGGAGATTTGCCGGAGCT 1079 ||||| | ||||| || | |||| | | ||||| ||||||||||| || |||||||||| Sbjct 975 TCTTCAGGAACAAGCTAT-ACGGTG-GTATACCTGAGTTCATCGGTGAAATGCCGGAGCT 1032 Query 1080 TGAAGTGTTACAGCTTTGGGAGAACAATTTCACCGGAAGCATCCCGCAGAAATTAGGAGA 1139 ||||||||||||||||||||||||||||||||||| | || || |||||||| || || Sbjct 1033 AGAAGTGTTACAGCTTTGGGAGAACAATTTCACCGGTGGTATTCCTCAGAAATTGGGGGA 1092 Query 1140 AAACGGTAAACTAA--ATCTCGTCGATCTCTCTTCCAATAAGCTGACCGGAACTTTACCG 1197 ||| |||| | || || || | || |||||||| || || || ||||| ||||| ||| Sbjct 1093 AAATGGTAGATTAGTGAT-TCTT-GACCTCTCTTCAAACAAACTCACCGGCACTTTGCCG 1150 Query 1198 CCGAACATGTGCTCCGGTAACAAGTTAGAA-ACTTTAATCACTCTTGGAAACTTTCTC-T 1255 ||||| ||||||||||||||| |||| | || ||||||||||| || ||||| || | Sbjct 1151 CCGAATATGTGCTCCGGTAACCGGTTA-ATGACATTAATCACTCTCGGTAACTT-CTTGT 1208 Query 1256 TTGGTTCAATCCCTGATTCTCTTGGTAAATGTGAGTCTTTGACCCGGATCCGAATGGGTG 1315 ||||||||||||| ||||| ||||| |||||||||||| ||||||||||||||||||||| Sbjct 1209 TTGGTTCAATCCCGGATTCGCTTGGCAAATGTGAGTCTCTGACCCGGATCCGAATGGGTG 1268 Query 1316 AGAATTTCCTGAACGGGTCAATCCCAAAAGGACTATTCGGATTACCCAAATTAACTCAAG 1375 ||||||| || |||||||| || ||||| || || ||||| |||||||||||| |||||| Sbjct 1269 AGAATTTTCTCAACGGGTCGATTCCAAAGGGGCTTTTCGGGTTACCCAAATTATCTCAAG 1328 Query 1376 TGGAGCTCCAAGATAATTATCTCTCCGGAGAGTTACC-AGTC-GCCGGAGGTG---TCTC 1430 ||||||| ||||||||||| ||| ||||||||||||| | | || ||||| | |||| Sbjct 1329 TGGAGCTTCAAGATAATTACCTCACCGGAGAGTTACCGA-TAAGC-GGAGGGGGAGTCTC 1386 Query 1431 TGTTAATCTTGGTCAGATCAGTTTATCAAACAACCAGCTCTCAGGTCCATTACCTCCGGC 1490 || | | ||||||||||| ||| | || || ||||||||||| |||||||||||| | || Sbjct 1387 TGGTGACCTTGGTCAGATTAGTCTGTCTAATAACCAGCTCTCTGGTCCATTACCTGCTGC 1446 Query 1491 GATCGGGAACTTCACCGGCGTTCAGAAACTTCTTCTTGATGGAAACAAGTTC-CAAGGTC 1549 || || |||||| |||| ||||| ||||| || |||||||| |||||||| | |||| Sbjct 1447 TATTGGAAACTTCTCCGGTGTTCAAAAACTACTCCTTGATGGTAACAAGTTTGCT-GGTC 1505 Query 1550 CTATTCCTTCAGAGGTAGGGAAGCTTCAGCAGCTCTCGAAGATTG-ATTTCAGCCACAA- 1607 | ||||| | ||| | |||| |||||||||||| || ||| ||| |||| ||||| || Sbjct 1506 CCATTCCACCGGAGATTGGGAGGCTTCAGCAGCTATCTAAG-TTGGATTTTAGCCATAAT 1564 Query 1608 CTTGTTCTCCGGTCGAATCGCGCCGGAGATTAGTCGTTGCAAGCT-CTTAACGTTTGTTG 1666 || ||| || ||||| ||||| |||||||| |||||||| ||||| || ||||||||||| Sbjct 1565 CT-GTTTTCGGGTCGGATCGCACCGGAGATCAGTCGTTGTAAGCTGCT-AACGTTTGTTG 1622 Query 1667 ATCTGAG-CAGAAACGAGCTCTCCGGTGAAATCCC-AAATGAGATCACTGCTATGAAGAT 1724 ||||||| | | || |||||||| ||||| || || ||| || ||||||| ||||| ||| Sbjct 1623 ATCTGAGTC-GTAATGAGCTCTCAGGTGATATTCCTAAA-GAAATCACTGGTATGAGGAT 1680 Query 1725 ATTGAATTACTTGAACCTGTCGAGAAACCATCTGGTTGGATCAATCCCTG-GTTCAATCT 1783 |||||||||||||| || || ||||||||||| ||||| || || |||| | | || Sbjct 1681 CTTGAATTACTTGAATCTTTCAAGAAACCATCTCGTTGGTTCGATACCTGTGA-CGATAG 1739 Query 1784 CGTCAATGCAGAGCTTAACATCTCTTGATTTCTCTTACAACAACCTCTCCGGTTTAGTTC 1843 | ||||||||||| || ||||| ||||||||||||||||||| ||||| ||| |||||| Sbjct 1740 CATCAATGCAGAGTTTGACATCAGTTGATTTCTCTTACAACAATCTCTCTGGTCTAGTTC 1799 Query 1844 CGGGAACAGGACAATTCAGTTACTTCAACTACACATCGTTCTTGGGTAATCCTGATCTCT 1903 || | || ||||| || ||||||||||| ||||||||||| ||||||||| ||||||| | Sbjct 1800 CGAGCACTGGACAGTTTAGTTACTTCAATTACACATCGTTTTTGGGTAATTCTGATCTTT 1859 Query 1904 GTGGTCCTTATCTTGG-TCCTTGTAAAGACGGTGTTGCTAAAGGAGGTCACCAGAGTCAT 1962 ||||||||||| |||| |||||| ||| |||||| ||||||| |||| Sbjct 1860 GTGGTCCTTAT-TTGGGTCCTTG------CGGA------AAAGGAACTCACCAGCCTCAT 1906 Query 1963 AGTAAAGGACCTTTATCAGCTTCTATGAAGTTATTGCTTGTTCTTGGACTACT-TGTTTG 2021 || ||| |||||||| ||| ||| || | || || || || ||| | || | |||| Sbjct 1907 -GTTAAG--CCTTTATCTGCTACTACAAAACTGTTACTCGTCCTCGGATTGCTCT-TTTG 1962 Query 2022 TTCGATTGCGTTCGCGGTAGTAGCCATAATCAAAGCTAGATCATTGAAAAAGGCGAGTGA 2081 |||||| | ||| || |||| ||||| | ||||||| | || |||| ||| |||||||| Sbjct 1963 TTCGATGGTGTTTGCCATAGTGGCCATTACCAAAGCTCGGTCCTTGAGAAATGCGAGTGA 2022 Query 2082 -GTCACGGGCTTGGAGGTTAACAGCTTTCCAGAGACTAGACTTCACGTGTGACGATGTCT 2140 | || || | ||||| || || ||||||||||||||||||||||| ||||||||||||| Sbjct 2023 AGCCAAGG-CATGGAGATTGACTGCTTTCCAGAGACTAGACTTCACTTGTGACGATGTCT 2081 Query 2141 TGGATTCTCTCAAAGAAGACAACATTATAGGCAAAGGAGGAGCTGGTATTGTCTATAAAG 2200 |||| |||||||| ||||||||||| || || ||||| || || || |||||||| |||| Sbjct 2082 TGGACTCTCTCAAGGAAGACAACATCATCGGTAAAGGCGGTGCCGGGATTGTCTACAAAG 2141 Query 2201 GCGTAATGCCTAATGGTGATCTAGTCGCGGTTAAAAGACTCGCTGCAATGTCTCGTGGAT 2260 || | |||||||| || |||||||||||||| || ||| | ||| ||||||| | ||||| Sbjct 2142 GCATTATGCCTAACGGCGATCTAGTCGCGGTCAAGAGATTGGCTACAATGTCCCATGGAT 2201 Query 2261 CTTCCCATGATCACGGCTTCAACGCAGAGATTCAAAC-CTTAGGAAGGATAAGACACAGA 2319 |||||||||||||||| |||||||| ||||||||||| || ||| || || ||||||||| Sbjct 2202 CTTCCCATGATCACGGGTTCAACGCCGAGATTCAAACGCT-AGGTAGAATCAGACACAGA 2260 Query 2320 CACATAGTGAGGCTTCTCGGATTTTGCTCAAACCACGAGACGAATCTACTTGTCTATGAG 2379 ||||| ||||| || ||||| |||||||| |||||||| |||||||| || || || ||| Sbjct 2261 CACATCGTGAGACTGCTCGGGTTTTGCTCCAACCACGAAACGAATCTCCTAGTGTACGAG 2320 Query 2380 TACATGCCTAATGGTAGTCTCGGTGAGGTGCTTCACGGTAAGAAAGGAGGACACTTGCAT 2439 ||||||||||||||||| || || ||||| ||||| || ||||||||||| || || ||| Sbjct 2321 TACATGCCTAATGGTAGCCTTGGAGAGGTTCTTCATGGAAAGAAAGGAGGTCATTTACAT 2380 Query 2440 TGGGACACACGTTACAAGATTGCTCTTGAAGCTGCTAAAGGACTCTGTTACCTTCATCAC 2499 |||||||||||||| ||||||||||||||||| || || || || || || || || ||| Sbjct 2381 TGGGACACACGTTATAAGATTGCTCTTGAAGCAGCCAAGGGTCTTTGCTATCTCCACCAC 2440 Query 2500 GATTGTTCTCCATTGATCGTTCACAGAGATGTCAAATCAAACAACATCCTCCTTGATTCA 2559 |||||||| || ||||||||||| |||||||| ||||| ||||| |||||||| ||||| Sbjct 2441 GATTGTTCCCCGTTGATCGTTCATAGAGATGTTAAATCCAACAATATCCTCCTCGATTCC 2500 Query 2560 AACTTTGAAGCTCATGTTGCTGACTTTGGTCTCGCTAAATTCCTTCAAGATTCCGGTACT 2619 ||||||||||||||||| || || ||||| ||||| |||||||| |||||||| |||||| Sbjct 2501 AACTTTGAAGCTCATGTCGCCGATTTTGGCCTCGCCAAATTCCTCCAAGATTCTGGTACT 2560 Query 2620 TCTGAATGTATGTCTGCAATCGCTGGCTCTTACGGCTACATAGCTCCAGAGTATGCGTAT 2679 |||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||| Sbjct 2561 TCTGAATGTATGTCCGCCATCGCCGGCTCTTACGGCTACATAGCTCCAGAGTACGCGTAT 2620 Query 2680 ACGTTGAAGGTAGATGAGAAGAGCGATGTGTATAGTTTCGGTGTGGTTCTTTTGGAACTC 2739 || |||||||||||||||||||| |||||||||||||||||||| |||||| | |||||| Sbjct 2621 ACATTGAAGGTAGATGAGAAGAGTGATGTGTATAGTTTCGGTGTTGTTCTTCTAGAACTC 2680 Query 2740 GTCACCGG-AAGAAAACCTGTCGGAGAATTTGGAGACGGTGTCGATATAGTGCAATGGGT 2798 ||||||| || |||||| |||||||||||||| ||||| || ||||| || |||||||| Sbjct 2681 ATCACCGGGAA-AAAACCCGTCGGAGAATTTGGTGACGGCGTTGATATCGTTCAATGGGT 2739 Query 2799 TCGTAAA-ATGACTGATTCGAACAAGGATTCG-GTTCTGAAAGTA-TTGGATCCGAGACT 2855 | | || ||||| ||||| || || |||| | || || |||||| ||| ||| ||||| Sbjct 2740 TAG-AAGCATGACGGATTCAAATAAAGATT-GTGTGCTCAAAGTAATTG-ATCTTAGACT 2796 Query 2856 TTCTTC-GATTCC-GATTCATGAAGTGACGCACGTCTTCTATGTAGCGATGCTCTGTGTA 2913 ||||| | | || | |||| ||||| || ||||||||||| || ||| ||||||| || Sbjct 2797 CTCTTCTG-TACCAG-TTCACGAAGTAACACACGTCTTCTACGTTGCGTTGCTCTGCGTT 2854 Query 2914 GAAGAACAAGCTGTTGAGAGGCCGACTATGAGAGAAGTTGTTCAGATTCTCACTGAGATC 2973 ||||||||||| || ||||||||||| ||| | ||||| ||||||||||||||||||||| Sbjct 2855 GAAGAACAAGCGGTGGAGAGGCCGACGATGCGTGAAGTCGTTCAGATTCTCACTGAGATC 2914 Query 2974 CCGAAGTTGCCACCGTCGAAGGATCAGCCGATGACGGAATCAG 3016 || ||| | || | |||||| | ||| || | ||||||||| Sbjct 2915 CCAAAGATCCCTCTTTCGAAGCAGCAGGCG--G-CGGAATCAG 2954 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 127721214988 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5