BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT5G65820.1
Length=1914
Score E
Sequences producing significant alignments: (Bits) Value
Ahg496818 jgi|Araly1|496818|fgenesh2_kg.8__2634__AT5G65820.1 2856 0.0
Ahg323555 jgi|Araly1|323555|fgenesh1_pm.C_scaffold_5001099 1570 0.0
> Ahg496818 jgi|Araly1|496818|fgenesh2_kg.8__2634__AT5G65820.1
Length=1917
Score = 2856 bits (1546), Expect = 0.0
Identities = 1801/1924 (94%), Gaps = 17/1924 (1%)
Strand=Plus/Plus
Query 1 ATGCTACCGTTTACGAGAGAGATGCATAGATTCTCTCCCATAGTCGAGTTTCT-TCTTAG 59
|||||||||||||| || ||||||||||||||||||||||||||||||| | ||||||
Sbjct 1 ATGCTACCGTTTAC--GA-TGATGCATAGATTCTCTCCCATAGTCGAGTTT-TATCTTAG 56
Query 60 CAAACGCCAAATTTTCTTACATTATTCTCAATTTAAGTCTCGCTTTGACTTGATTCACCG 119
|||||| ||| ||||||||| || ||||||||| |||||||||||||||||||||||| |
Sbjct 57 CAAACGTCAATTTTTCTTACTTTCTTCTCAATTCAAGTCTCGCTTTGACTTGATTCACAG 116
Query 120 AAGTTTTCACGTTTCTAGAGCTCTCGAAGATAATTTCCGGAGAAGTAA-CGGGATTGGCT 178
||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 117 AAGTTTTCACGTTTCTAGAGCTCTCGAAGATAATTTCCGGAGAAG-AAGAGGGATTGGCT 175
Query 179 TAGTTTGTCTCGAGAAGAG------CCACAACGATCGCACGAAAAACTCCAAGTATGATG 232
||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||
Sbjct 176 TAGTTTGTCTCGAGAAGAGCCACAACCACAACGATCGTACGAAAAACTCCAAGTACGATG 235
Query 233 AATTCGCGAGTGATGTCGAGAAATCATACAGAATTCTGCGGAAATTTCATTCTAGGGTTC 292
||||||||||||||||||| ||| | ||||| ||| |||||||||||||||| |||||||
Sbjct 236 AATTCGCGAGTGATGTCGAAAAAGCCTACAGGATTTTGCGGAAATTTCATTCCAGGGTTC 295
Query 293 CGAAGTTGGAACTCGCGCTTAACGAATCCGGTGTTGAACTCCGACCCGGGTTAATCGAAC 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 296 CGAAGTTGGAACTCGCGCTTAACGAATCCGGTGTTGAACTCCGACCCGGGTTAATCGAAC 355
Query 353 GGGTTTTGAATCGTTGTGGAGATGCTGGGAATCTAGGTTACAGATTCTTCGTCTGGGCGG 412
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 356 GGGTTCTGAATCGTTGTGGGGATGCTGGGAATCTAGGTTACAGATTCTTCGTCTGGGCGG 415
Query 413 CGAAGCAACCTCGTTATTGTCACAGTATCGAAGTGTATAAGTCAATGGTGAAGATTCTTA 472
||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |
Sbjct 416 CGAAGCAACCTCGTTATTGTCACAGCATCGAAGTGTATAAATCAATGGTGAAAATTCTAA 475
Query 473 GTAAAATGCGTCAATTTGGAGCTGTTTGGGGTTTAATTGAAGAAATGAGGAAGGAGAATC 532
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 476 GTAAGATGCGTCAATTTGGAGCTGTTTGGGGTTTAATCGAAGAAATGAGGAAGGAGAATC 535
Query 533 CGCAGTTGATTGAACCGGAATTGTTTGTGGTTTTGGTTCAGAGATTTGCGTCTGCGGATA 592
|||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||
Sbjct 536 CGCAGTTGATTGAACCGGAATTGTTTGTTGTTTTGGTTCAGAGGTTTGCCTCTGCGGATA 595
Query 593 TGGTGAAGAAAGCCATTGAGGTGCTCGACGAAATGCCTAAGTTCGGTTTTGAGCCAGATG 652
||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 596 TGGTGAAGAAAGCCATTGAGGTGCTCGACGAAATGCCTAAGTTTGGTTTAGAGCCAGACG 655
Query 653 AGTATGTATTCGGGTGTTTGCTAGATGCATTGTGTAAGCACGGTAGTGTTAAGGATGCTG 712
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 656 AGTATGTATTCGGGTGTTTGCTAGATGCGTTGTGTAAGCACGGTAGCGTTAAGGATGCTG 715
Query 713 CAAAGCTTTTTGAGGATATGAGAATGCGGTTTCCGGTGAATTTGCGGTATTTTACTTCGT 772
|||||||||| |||||||||||| |||||||||||||||||||| | |||||||||||||
Sbjct 716 CAAAGCTTTTCGAGGATATGAGATTGCGGTTTCCGGTGAATTTGAGATATTTTACTTCGT 775
Query 773 TGTTGTATGGTTGGTGCAGGGTAGGGAAGATGATGGAAGCTAAATATGTTTTGGTTCAAA 832
||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |
Sbjct 776 TGTTGTATGGTTGGTGCAGGGAAGGGAAGATGATGGAGGCTAAATATGTTTTGGTTCAGA 835
Query 833 TGAACGAAGCTGGGTTTGAGCCAGACATTGTTGATTACACTAACTTGCTAAGTGGATATG 892
|||| |||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||
Sbjct 836 TGAAGGAAGCTGGGTTTGAGCCAGATGTTGTTGATTACACCAACTTGTTAAGTGGGTATG 895
Query 893 CTAATGCTGGTAAAATGGCAGATGCTTATGATCTTTTGAGAGATATGAGAAGAAGAGGCT 952
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |
Sbjct 896 CTAATGCTGGTAAAATGGCTGATGCTTATGATCTTTTGAAAGATATGAGAAGAAGAGGGT 955
Query 953 TTGAACCGAATGCGAAC-TGTTACACGGTTTTGATTCAAGCATTGTGTAAGGTAGATAGA 1011
||||||||||||| ||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 956 TTGAACCGAATGC-AACTTGCTACACGGTTTTGATTCAAGCATTGTGTAAGGTAGATAGA 1014
Query 1012 ATGGAGGAGGCAATGAAGGTATTTGTTGAGATGGAGAGGTATGAATGTGAGGCTGATGTT 1071
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1015 ATGGAGGAGGCAATGAAGGTATTTGTTGAGATGGAGAGGTATGAATGCGAGGCTGATGTT 1074
Query 1072 GTGACTTACACTGCATTAGTTAGTGGGTTTTGCAAATGGGGAAAGATCGATAAATGTTAT 1131
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1075 GTGACTTACACTGCATTGGTTAGTGGGTTTTGCAAATGGGGAAAGATCGATAAGTGTTAT 1134
Query 1132 ATTGTTTTAGACGATATGATaaaaaaaGGGCTCATGCCGTCTGAACTCACCTATATGCAT 1191
| ||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||
Sbjct 1135 CTAGTTTTAGACGATATGATAAAAAAGGGGCTCATGCCTTCTCAACCCACCTATATGCAT 1194
Query 1192 ATAATGGTGGCTCATGAGAAGAAGGAAAGTTTTGAAGAGTGTTTGGAGCTGATGGAGAAG 1251
|| |||| ||||||||||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 1195 ATCATGGCAGCTCATGAGAAAAAGGAAAAACTTGTAGAGTGTTTGGAGCTGATGGAGAAG 1254
Query 1252 ATGAGGCAAATAGAGTATCATCCTGATATTGGCATTTACAATGTCGTCATCAGATTGGCT 1311
|||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1255 ATGAAGCAGATAGAGTATCATCCCGATATTGGCATTTACAATGTCGTCATCAGATTGGCT 1314
Query 1312 TGTAAGTTGGGAGAAGTAAAGGAAGCTGTTAGATTATGGAACGAAATGGAAGAAAACGGT 1371
||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1315 TGTAAATTGGGAGAAGTAAAGGAAGCTGTTAGATTATGGAACGAAATGGAAGGGAACGGT 1374
Query 1372 TTGAGTCCTGGAGTAGATACGTTTGTCATAATGATCAATGGATTAGCAAGCCAAGGTTGT 1431
||||||||||||| |||||||||||| || || |||||||||||| ||||||||||||||
Sbjct 1375 TTGAGTCCTGGAGCAGATACGTTTGTTATTATTATCAATGGATTAACAAGCCAAGGTTGT 1434
Query 1432 TTACTCGAAGCGAGTGATCACTTCAAAGAAATGGTAACTCGAGGACTGTTCTCTGTTTCT 1491
||||||||||| |||||||||| |||||||||||| |||||||| ||||||| ||| ||
Sbjct 1435 TTACTCGAAGCCTGTGATCACTTTAAAGAAATGGTAGCTCGAGGATTGTTCTCCGTTCCT 1494
Query 1492 CAATATGGAACTCTGAAGTTATTGCTAAATACCGTTTTAAAAGACAAGAAGCTTGAAATG 1551
||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 1495 CAATACGGAACTCTGAAGTTATTGCTAAATACCCTTTTAAAAGACAAGAAGCTCGAAATG 1554
Query 1552 GCGAAAGATGTTTGGAGTTGTATCACAAGTAAAGG-TGCTTGCGAGCTGAATGTATTATC 1610
|| ||||||||||||||||| |||||||||||||| | |||||||||||| ||||| |||
Sbjct 1555 GCAAAAGATGTTTGGAGTTGCATCACAAGTAAAGGCT-CTTGCGAGCTGAGTGTATCATC 1613
Query 1611 TTGGACAATATGGATACATGCCTTGTTCTCAAAAGGCTATGAAAAGGAAGCGTGTTCTTA 1670
|||||||||||||| |||||||||||||||||||| ||||||||||| || ||||||||
Sbjct 1614 GTGGACAATATGGATCCATGCCTTGTTCTCAAAAGGTTATGAAAAGGAGGCTTGTTCTTA 1673
Query 1671 TTGTATTGAAATGATAGAGATGGACTTCATGCCACAACCAGACACATTTGCTAAACTTAT 1730
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1674 TTGTCTTGAAATGATAGAGATGGAGTTCATGCCACAACCAGACACATTTGCTAAACTTAT 1733
Query 1731 GAAGGGTTTGAAGAAATTGTATAATAGAGAATTTGCTGGAGAGATTACAGAGAAGGTGAG 1790
||||| ||||||||||||||| |||||||||| |||| ||||||||||||||| |||||
Sbjct 1734 CAAGGGATTGAAGAAATTGTATCATAGAGAATTCGCTGTAGAGATTACAGAGAAAGTGAG 1793
Query 1791 GAATATGGCAGCTGAGAGAGAGATGAGTTTTAAGATGTATAAGAGAAGAGGAGTGCAAGA 1850
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1794 GAATATGGCAGCTGAGAGAGAGATGAGTTTTAAGATGTATAAGAGAAGAGGAGTGCAAGA 1853
Query 1851 TTTGACTGAGAAAGCTAAATCTAAACAAGATAGAGAAGGGAAGAAGAAACAGAGGAGTCG 1910
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 1854 TTTGACTGAGAAAGCTAAATCTAAACAAGATAGAGAAGGGAAGAAGAAGCAGAGGACTCG 1913
Query 1911 ATAA 1914
||||
Sbjct 1914 ATAA 1917
> Ahg323555 jgi|Araly1|323555|fgenesh1_pm.C_scaffold_5001099
Length=3567
Score = 1570 bits (850), Expect = 0.0
Identities = 1435/1710 (84%), Gaps = 69/1710 (4%)
Strand=Plus/Plus
Query 229 GATGAATTCG-CGAGTGATGTCGAGAA-ATCATACAGAATTCTGCGGAAAT-TTCATTCT 285
|||||||||| || |||| || ||||| || |||||||||| ||||| ||| ||||||
Sbjct 190 GATGAATTCGCCG-GTGACGTTGAGAAGAT-ATACAGAATTTTGCGG-AATCACCATTCT 246
Query 286 AGGGTTCCGAAGTTGGAACTCGCGCTTAACGAATCCGGTGTTGAACTCCGACCCGGGTTA 345
||||||||||| ||||| || || ||||||||||| ||| |||| || ||||||||||||
Sbjct 247 AGGGTTCCGAAATTGGAGCTTGCTCTTAACGAATCAGGTATTGATCTACGACCCGGGTTA 306
Query 346 ATCGAACGGGTTTTGAATCGTTGTGGAGATGCTGGGAATCTAGGTTACAGA-TTCTTCGT 404
|||| ||| || |||| ||| |||||||||||||||||| ||||||| ||| || ||| |
Sbjct 307 ATCGTACGAGTGTTGAGTCGGTGTGGAGATGCTGGGAATTTAGGTTATAGATTTTTTC-T 365
Query 405 CTGGGCGGCGAAGCAACCTCGTTATTGTCACAG-TATCGAAGTGTATAAGTCAATGGTGA 463
||||| ||||||||||| | |||||||| || ||| ||||||| ||| ||||||||||
Sbjct 366 ATGGGCAACGAAGCAACCTGGGTATTGTCATAGCTAT-GAAGTGTGTAAATCAATGGTGA 424
Query 464 AGATTCTTAGTAAAATGCGTCAATTTGGAGCTGTTTGGGGTTTAATTGAAGAAATGAGGA 523
|||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 425 TGATTCTTAGTAAAATGCGGCAATTTGGAGCTGTTTGGGGTTTAATTGAAGAGATGAGGA 484
Query 524 AGGAGAATCC-GCAGTTGATTGAACCGGAATTGTTTGTGGTTTTGGTTCAGAGATTTGCG 582
|||||||||| | |||||||||| || || ||||| || || ||| | | ||| |||||
Sbjct 485 AGGAGAATCCAG-AGTTGATTGAGCCAGAGTTGTTCGTTGTATTGATACGGAGGTTTGCT 543
Query 583 TCTGCGGATATGGTGAAGAAAGCCA-TTGAGGTGCTCGACGAAATGCCTAAGT-TCGGTT 640
||||| |||||||||||||||| | ||||||||||||||||||||||||||| | ||||
Sbjct 544 TCTGCTAATATGGTGAAGAAAGC-AGTTGAGGTGCTCGACGAAATGCCTAAGTAT-GGTT 601
Query 641 TTGAGCCAGATGAGTATGTATTCGGGTGTTTGCTAGATGCATTGTGTAAGCACGGTAGTG 700
||||||| || |||||||| || || |||||| ||||||| ||||||||| |||||||||
Sbjct 602 TTGAGCCTGACGAGTATGTTTTTGGATGTTTGTTAGATGCTTTGTGTAAGAACGGTAGTG 661
Query 701 TTAAGGATGCTGCAAAGCTTTTTGAGGATATGAGA-ATGCGGTTTCCGGTGAATTTGCGG 759
||||||||||| ||||| ||||||||||||||||| | | |||||| |||||| |||
Sbjct 662 TTAAGGATGCTTCAAAGGTTTTTGAGGATATGAGAGA-GAAGTTTCCTCCGAATTTACGG 720
Query 760 TATTTTACTTCGTTGTTGTATGGTTGGTGCAGGGTAGGGAAGATGATGGAAGCTAAATAT 819
||||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||| |
Sbjct 721 TATTTCACTTCGTTGTTGTATGGTTGGTGTAGGGAAGGGAAGTTGATGGAAGCTAAGGAA 780
Query 820 GTTTTGGTTCAAATGAACGAAGCTGGGTTTGAGCCAGACATTGTTGATTACACTAACTTG 879
||||||||||| ||||| ||||||||| ||||||| |||||||| | || ||||||||||
Sbjct 781 GTTTTGGTTCAGATGAAGGAAGCTGGGCTTGAGCCTGACATTGTGGTTTTCACTAACTTG 840
Query 880 CTAAGTGGATATGCTAATGCTGGTAAAATGGCAGATGCTTATGATCTTTTGAGA-GATAT 938
|| |||||||||||| ||||||| |||||||| ||||||||||||||| ||| | |||||
Sbjct 841 CTTAGTGGATATGCTCATGCTGGGAAAATGGCGGATGCTTATGATCTTATGA-ATGATAT 899
Query 939 GAGAAGAAGAGGCTTTGAACCGAATGCGAACTGTTACACGGTTTTGATTCAAGCATTGTG 998
||||| |||||| | ||| ||||||||||| ||||||||||||||||| || || |||||
Sbjct 900 GAGAAAAAGAGGGTATGAGCCGAATGCGAATTGTTACACGGTTTTGATCCAGGCGTTGTG 959
Query 999 TA--A-GGTAGAT-AGAATGGAGGAGGCAATGAAGGTATTTGTTGAGATGGAGAGGTATG 1054
|| | || ||| |||||||| ||||| |||| ||| |||||||||||||| |||||||
Sbjct 960 TAGGACGG-AGAAGAGAATGGATGAGGCGATGAGGGTTTTTGTTGAGATGGAAAGGTATG 1018
Query 1055 AATGTGAGGCTGATGTTGTGACTTACACTGCATTAGTTA-GTGGGTTTTGCAAATGGGGA 1113
||||||||||||| ||||||||||||| || | | || | ||||||||||| ||||||
Sbjct 1019 GATGTGAGGCTGATATTGTGACTTACACCGCGCT-GATAAGCGGGTTTTGCAAGTGGGGA 1077
Query 1114 AAGATCGATAAATGTTATATTGTTTTAGACGATATGATaaaaaaaGG-GCTCATGCCGTC 1172
| ||||||||| |||||| ||||||||| ||||||| ||| ||||| | | || |||||
Sbjct 1078 ATGATCGATAAGGGTTATAGTGTTTTAGATGATATGAGAAAGAAAGGAGTT-ATACCGTC 1136
Query 1173 TG-AACTCACC-TATATGCATATAATGGTGGCTCATGAGAAGAAGGAA-AGTTTTGAAGA 1229
| || | | | |||||||| ||||||||||||||||||||||| ||| | ||| |||||
Sbjct 1137 -GCAAGT-ATCATATATGCAGATAATGGTGGCTCATGAGAAGAAAGAACAATTT-GAAGA 1193
Query 1230 GTGTTTGGAGCTGATGGAGAAGATGAGGCAAATAGAGTA-TCATCCTGATATTGGCATTT 1288
|||||||||| |||| |||||||||| |||||||| || |||||| ||| || |||||
Sbjct 1194 GTGTTTGGAGTTGATTGAGAAGATGAAGCAAATAG-GTTGTCATCCCGATCTTCTCATTT 1252
Query 1289 ACAATGTCGTCATCAGATTGGCTTGTAAGTTG-GGAGAAGT-AAAGGAAGCTGTTAGATT 1346
||||||| || ||||||||||||||||| || || ||||| |||| |||| ||| | ||
Sbjct 1253 ACAATGTAGTGATCAGATTGGCTTGTAACTTTAGG-GAAGTGAAAG-AAGCAGTTCGGTT 1310
Query 1347 ATGGAACGAAATGGAAGAAAACGGTTTGAGTCCTGGAGTAGATACGTTTGTCATAATGAT 1406
||||||||||||||||| || ||||| ||||||||||| || | |||||| || |||||
Sbjct 1311 ATGGAACGAAATGGAAGCTAATGGTTTAAGTCCTGGAGTTGACATGTTTGTTATTATGAT 1370
Query 1407 CAATGGATT-AGCAAGCCAAGGTTGTTTACTCGAAGCGAGTGATCACTTCAAAGAAATGG 1465
||| ||||| | | |||||||||| | || ||||||| | ||||||||||||||||||
Sbjct 1371 CAACGGATTTA-CTAGCCAAGGTTATCTAATCGAAGCCTGCAATCACTTCAAAGAAATGG 1429
Query 1466 TAA-CTCGAGGACTGTTCTCTGTTTCTCAATATGGAACTCTGAAGTTATTGCTAAATAC- 1523
||| | |||||| | ||||||| ||||||||||||| ||||||| ||||||||||||
Sbjct 1430 TAAGC-CGAGGATTATTCTCTGCGCCTCAATATGGAACGCTGAAGTCATTGCTAAATACT 1488
Query 1524 CGTTTTAAAAGACAAGAAGCTTGAAATGGCGAAAGATGTTTGGAGTTG-T-ATCACAAGT 1581
| || ||| ||| | ||||||||||||||||||||||| |||||||| | |||| ||
Sbjct 1489 C-TTCTAAGAGATGATAAGCTTGAAATGGCGAAAGATGTATGGAGTTGCTTATCA-AACA 1546
Query 1582 AAAGGTG--CTTGCGAGCTGAATGTATTATCTTGGACAATATGGATACATGCCTTGTTCT 1639
||| | |||| ||||||||||||| | |||||||||||||||| ||||| ||||||
Sbjct 1547 AAACCTCTTCTTGTGAGCTGAATGTATCAGCTTGGACAATATGGATCCATGCTTTGTTCG 1606
Query 1640 CAAAAGG-CTATGAAAAGGAAGCGTGTTCTTATTGTATTGAAATGATAGAGATGGACTTC 1698
||||||| | | | |||||||| ||||| |||||| |||| ||||| |||||||||||
Sbjct 1607 CAAAAGGTC-ACGTGAAGGAAGCATGTTCGTATTGTCTTGATATGATGGAGATGGACTTG 1665
Query 1699 ATGCCACAACC-AGACACATTT-GCTAAACTTATGAAGGGTTTGAAGAAATTGTATAATA 1756
||||| ||||| | | || || || ||||||||||| || ||| | ||| ||||||| |
Sbjct 1666 ATGCCGCAACCTA-ATAC-TTACGCGAAACTTATGAAAGGATTGCATAAACTGTATAACA 1723
Query 1757 G-A-GAATTTGCTGGAGAGATTACAGAGAAGGTGAGGAATATGGC-AGCTGAGAGAGAGA 1813
| | || | |||| |||||||||||||||||||| ||| ||||| || |||||||||||
Sbjct 1724 GGACGA-TC-GCTGCAGAGATTACAGAGAAGGTGATGAAGATGGCGAG-TGAGAGAGAGA 1780
Query 1814 TGAGTTTTAAGATGTATAAGA-GAAGAGGAGTGCAAGATTTGACTGAGAAAGCTAAATCT 1872
|||||||||| |||||||||| || |||| | | | ||||||| ||||||||||||| ||
Sbjct 1781 TGAGTTTTAAAATGTATAAGAAGA-GAGGTGAGGAGGATTTGATTGAGAAAGCTAAACCT 1839
Query 1873 AAAC--AAGA-TAGAGAAGGGAAGAAGAAA 1899
||| || | || ||||||||||||||||
Sbjct 1840 AAAGGTAATAATAAAGAAGGGAAGAAGAAA 1869
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 71914382560
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5