BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT5G67280.1 Length=2480 Score E Sequences producing significant alignments: (Bits) Value Ahg496872 jgi|Araly1|496872|fgenesh2_kg.8__2688__AT5G67280.1 3731 0.0 Ahg936568 jgi|Araly1|936568|scaffold_500759.1 309 6e-83 Ahg897165 jgi|Araly1|897165|Al_scaffold_0005_1131 292 6e-78 Ahg944134 jgi|Araly1|944134|scaffold_700363.1 252 1e-65 Ahg343889 jgi|Araly1|343889|fgenesh1_pg.C_scaffold_4000231 246 5e-64 > Ahg496872 jgi|Araly1|496872|fgenesh2_kg.8__2688__AT5G67280.1 Length=2467 Score = 3731 bits (2020), Expect = 0.0 Identities = 2330/2479 (94%), Gaps = 23/2479 (1%) Strand=Plus/Plus Query 1 ACAATCACATGGCCTTTTCAAAAAATCAATCTTTTAGTTCTCTATCGATGCGTAGGCTTG 60 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||| || || Sbjct 1 ACAATCACATGGCCTTTTCAAAAAACCAATCCTTTAGTTCTCTATCGATGCGTAAGCCTG 60 Query 61 AAGCATGATGACGACAGTCGCCGCCGATCTCCACCGTTATCTTTTCCTG--ATTACCGTT 118 ||| | |||||||||||||||||||||||||| |||||||| ||| ||| ||||||||| Sbjct 61 AAGAACGATGACGACAGTCGCCGCCGATCTCCGCCGTTATC-TTT-CTGTAATTACCGTT 118 Query 119 TT-TCTTTTCTTCCTCTGCGACAAAACCTCTCTTGCTCTGACCACAGACGGTGTTCTTCT 177 || || ||| || | |||||| || | |||||||||||| |||||||||||||||||| Sbjct 119 TTGTC-CTTCCTCTTTTGCGACCAATCAGCTCTTGCTCTGAACACAGACGGTGTTCTTCT 177 Query 178 TCTCTCTTTCCGTTACTCAATCGTTGACGATCCTCTTTACGTTTTTCGGAGCTGGAGATT 237 |||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||| Sbjct 178 TCTCTCTTTCCGTTACTCAATCGTCGACGATCCTCTTTCCGTTTTACGGAGCTGGAGATT 237 Query 238 CGACGACGAGACTCCTTGCTCTTGGCGTGGTGTCACGTGCGATGCATCTTCCCGGCACGT 297 || |||||||| |||||||||||||| |||||||||||||||| ||||||||||||||| Sbjct 238 AGAAGACGAGACCCCTTGCTCTTGGCGAGGTGTCACGTGCGATGAATCTTCCCGGCACGT 297 Query 298 GACTGTTCTGTCACTTCCAAGCTCGAACCTTACCGGCACACTACCTTCAAATTTGGGTTC 357 ||||||||| |||||||| ||||||||||||||||| ||||| ||||||||||| ||||| Sbjct 298 GACTGTTCTTTCACTTCCGAGCTCGAACCTTACCGGTACACTTCCTTCAAATTTAGGTTC 357 Query 358 ACTCAATTCACTTCAAAGACTTGATCTTTCCAACAATTCCATCAATGGGTCTTTCCCGGT 417 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 358 ACTCAATTCACTTCAAAGACTTGATCTTTCCAACAATTCGATCAATGGGTCTTTCCCTGT 417 Query 418 TTCGCTTCTCAACGCGACGGAGCTTCGATTTCTTGATCTGTCCGATAATCACATCTCCGG 477 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 418 TTCGCTTCTCAACGCGACGGAGCTTCGATTTCTTGATCTGTCCGATAATCACATTTCCGG 477 Query 478 TGCACTACCGGCGAGTTTTGGCGCGCTTTCGAACCTCCAAGTGTTGAATCTCTCCGATAA 537 | ||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct 478 CGAACTACCGTCGAGTTTTGGCGCGCTTTGGAACCTCAAAGTGTTGAATCTCTCCGATAA 537 Query 538 TTCCTTCGTCGGCGAATTACCGAACACATTAGGATGGAACCGGAACTTAACGGAGATTTC 597 ||||||||||||||| |||||||| |||||||| ||||| ||||||||||||| |||||| Sbjct 538 TTCCTTCGTCGGCGAGTTACCGAAGACATTAGGTTGGAATCGGAACTTAACGGTGATTTC 597 Query 598 ACTTCAGAAAAACTATTTATCCGGCGGGATTCCGGGAGGTTTTAAGTCGACGGAGTATCT 657 ||| |||| || ||||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 598 ACTGAAGAACAATTATTTCTCCGGCCAGATTCCGGGAGGTTTTAAGTCGACGGAGTATCT 657 Query 658 TGATCTCTCGTCAAATTTGATCAAAGGCTCGTTGCCGTCACATTTCAGAGGGAATCGTCT 717 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 658 TGACCTGTCGTCAAATTTGATCAAAGGCTCGTTGCCGTCACATTTCAGAGGGAATCGTTT 717 Query 718 ACGCTATTTCAACGCTTCGTACAACAGAATCTCCGGCGAGATTCCGTCAGGTTTCGCCGA 777 |||||||||||||| ||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct 718 ACGCTATTTCAACGTTTCGTTCAACAGAATCTCCGGCAAGATTCCATCAGGTTTCGCCGA 777 Query 778 CGAAATCCC-GGAAGACGCCACCGTTGATCTCTCATTCAACCAACTTACAGGTCAAATCC 836 |||||||| | || |||||||||| ||||||||||||||||| || || |||||||||| Sbjct 778 TGAAATCCCAGCAA-ACGCCACCGTCGATCTCTCATTCAACCAGCTCACGGGTCAAATCC 836 Query 837 CGGGTTTTCGGGTTCTCGATAACCAAGAATCCAACTCTTTCTCCGGTAACCCGGGTCTCT 896 | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 837 CTGGTTTTCGGGTTCTCGATAACCAAGAATCTAACTCTTTCTCCGGTAACCCGGGTCTCT 896 Query 897 GCGGATCCGA-CCATGCAAAACACCCTTGTCGTGACGGTGAAGCAACCTCTCCACCTCCA 955 |||||||| | ||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 897 GCGGATCCAACCCA-GCAAAACACCCTTGCCGTGACGGTGAAGCAACCTCTCCACCTCCA 955 Query 956 TCGCCGACTCCAAATTCTCCTCCTGCATTAGCTGCTATACCAAATACTATTGGCTTAACC 1015 ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| Sbjct 956 TCGCCGACTCCAAATTCCCCTCCTGCATTAGCTGCTATACCAAATACCATTGGCTTAACC 1015 Query 1016 AATCACCCAATTAGCTCCAAAACCGGTCCGAAATCAAAATGGGATCATAAACCGGTGCTT 1075 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct 1016 AATCACCCAATTAGCTCCAAAACCGGTCAAAAATCAAAATGGGATCATAAACCGGGGCTT 1075 Query 1076 ATCATTGGCATTGTTGTCGGTGACTTAGCCGGTTTAGCAATCCTCGGGATTGTGTTTTTC 1135 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1076 ATCATTGGCATCGTTGTCGGTGACTTAGCCGGTTTAGCTATCCTCGGGATTGTGTTTTTC 1135 Query 1136 TACATTTACCAGTCGAGAAAACGGAAGACCGTAACGGCTACGTCAAAATGGTCCACGTCA 1195 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1136 TACATTTACCAGTCGAGAAAAAGGAAGACCGTAACGGCTACGTCAAAATGGTCCACGTCA 1195 Query 1196 TCAACAGATTCCAAGGTCTCAAAATGGTACTGTTTACGCAAATCCGTTTACGTTGACGGT 1255 |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1196 TCAACAGATTCCAAAGTCTCAAAATGGTACTGTCTACGCAAATCCGTTTACGTTGACGGT 1255 Query 1256 GACTGCGAAGAAGAAGAAGAGGAATCTGAGACATCGGAATCCGAATCCGACGAAGAGAAC 1315 ||||| ||||| |||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 1256 GACTGTGAAGACGAAGAAGAAGAATCCGAGACATCGGAATCCGAATCCGACGAAGAGAAC 1315 Query 1316 CCGGTCGGACCAAATCGACGGTCAGGATTAGACGATCAAGa-aaaaaaGGGAACGTTAGT 1374 ||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| Sbjct 1316 CCGGTCGGACCAAATCGACGGTCAGGATTAGACGATCAAGACAAGAAA-GGAACGTTAGT 1374 Query 1375 GAATCTCGATTCAGAGAAAGAGCTTGAAATCGAAACGCTTCTCAAAGCATCAGCTTATAT 1434 |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 1375 AAATCTCGATTCAGAGAAAGAACTTGAAATCGAAACGCTTCTCAAAGCTTCAGCTTATAT 1434 Query 1435 TTTGGGAGCCACCGGTTCGAGCATAATGTATAAAGCGGTGCTTCAAGACGGAACAGCTGT 1494 ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 1435 TTTGGGAGCCACCGGTTCGAGCATAATGTATAAAGCGGTTCTTCAAGACGGAACGGCTGT 1494 Query 1495 GGCGGTTCGACGAATAGCTGAATGCGGTTTAGACCGGTTTAGAGATTTCGAAGCTCAGGT 1554 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1495 GGCGGTTCGACGTATAGCTGAATGCGGTTTAGACCGGTTTAGAGATTTCGAAGCTCAGGT 1554 Query 1555 TCGAGCCGTGGCTAAGTTAATACATCCAAACCTGGTACGAATTCGCGGTTTCTATTGGGG 1614 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| Sbjct 1555 TCGAGCCGTGGCTAAGTTAATACATCAAAACCTGGTACGAATTCGAGGTTTCTATTGGGG 1614 Query 1615 ATCCGACGAGAAACTTGTCATTTACGATTTTGTCCCTAACGGCAGCCTCGCTAACGCCCG 1674 | |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1615 AGCCGACGAGAAGCTTGTCATTTACGATTTTGTCCCTAACGGCAGCCTCGCTAATGCCCG 1674 Query 1675 TTACCGGAAAGTGGGCTCCTCTCCTTGTCATTTACCTTGGGACGCTCGGCTCAAGATAGC 1734 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1675 TTACCGGAAAGTGGGCTCCTCTCCTTGTCATTTACCTTGGGAAGCTCGGCTCAAGATAGC 1734 Query 1735 AAAAGGCATAGCTCGCGGGCTAACATACGTACACGACAAGAAGTACGTGCATGGTAACCT 1794 |||||| ||||| || ||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1735 AAAAGGTATAGCCCGTGGGCTAACATATGTACACGACAAGAAGTACGTGCATGGTAACCT 1794 Query 1795 CAAGCCTAGCAATATCCTTTTGGGCTTAGATATGGAGCCTAAAGTTGCGGATTTCGGTCT 1854 ||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1795 CAAGCCTAGTAATATCCTTTTGGGCTTAGATATGGAGCCTAAAGTTGCCGATTTCGGGCT 1854 Query 1855 TGAGAAGCTTTTGATTGGGGACATGAGTTATAGAACCGGTGGATCGGCTCCAATATTCGG 1914 |||||||||||||||||| ||||||||||||||| | |||||||||||||| |||||||| Sbjct 1855 TGAGAAGCTTTTGATTGGCGACATGAGTTATAGAGCTGGTGGATCGGCTCCTATATTCGG 1914 Query 1915 AAGCAAGAGATCCACAACGTCTCTTGAGTTTGGGCCGAGTCCAAGCCCAAGTCCAAGTTC 1974 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1915 AAGCAAGAGATCCACAACATCTCTTGAGTTTGGGCCGAGTCCAAGCCCAAGTCCAAGTTC 1974 Query 1975 AGTCGGGTTACCCTACAATGCTCCAGAATCTCTTCGGAGTATTAAGCCGAATTC-GAAAT 2033 |||||||||||| |||||||| || |||||||||||||| || |||||||| || ||||| Sbjct 1975 AGTCGGGTTACCTTACAATGCCCCGGAATCTCTTCGGAGCATAAAGCCGAA-TCAGAAAT 2033 Query 2034 GGGATGTGTACTCGTTCGGAGTTATTCTGCTTGAGCTACTAACGGGAAAGATCGTGGTGG 2093 |||||||||||||||||||||||||||| || ||| |||| ||||||||||||||||||| Sbjct 2034 GGGATGTGTACTCGTTCGGAGTTATTCTCCTGGAGTTACTTACGGGAAAGATCGTGGTGG 2093 Query 2094 TCGACGAGCTTGGACAGGTTAATGGGCTTGTGATTGATGACGGTGAGCGGGCAATTCGGA 2153 | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2094 TTGATGAGCTTGGACAGGTTAATGGGCTTGTGATTGATGACGGTGAGCGGGCAATTCGGA 2153 Query 2154 TGGCGGACTCTGCTATACGGGCTGAGTTAGAAGGCAAAGAAGAAGCTGTGTTGGCATGTT 2213 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2154 TGGCGGACTCTGCTATACGGGCTGAGTTAGAAGGCAAAGAAGAAGCTGTGTTGGCATGTT 2213 Query 2214 TGAAAATGGGCCTAGCTTGTGCGTCTCCAATACCACAGAGAAGGCCCAATATCAAAGAGG 2273 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 2214 TGAAAATGGGCCTAGCTTGTGCATCTCCAATACCACAGAGAAGGCCCAATATCAAAGAGG 2273 Query 2274 CTTTGCAAGTTCTCGAGAGATTCCCTGTTCATTCTAGTCAACAGTAATGATAATAATTAA 2333 |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2274 CTTTACAAGTTCTCGAGAGATTCCCTGTTCATTTTAGTCAACAGTAATGATAATAATTAA 2333 Query 2334 GACCAAGAAA-GAGTTAAATAACTTGACTGTGTGTACTTAGAGTT-AGATTGATAGGCAA 2391 |||||||||| || ||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 2334 GACCAAGAAAAGACTTAAATAACTTGACTGTGTGTACTTAGAGTTTAGATTGATAGGCGA 2393 Query 2392 GTTTG--ATCTTCTTTTGTGGCTTCTGATTTTGAATTTATTTTTGGTTATGATTTTAGTG 2449 |||| || |||||||||||||||||||||||||||||| ||||||| | | |||| Sbjct 2394 GTTTTTTATGTTCTTTTGTGGCTTCTGATTTTGAATTTATATTTGGTTTT-A----AGTG 2448 Query 2450 ACAATTATATCTCTGGGCT 2468 ||||| ||||||||||||| Sbjct 2449 ACAATAATATCTCTGGGCT 2467 > Ahg936568 jgi|Araly1|936568|scaffold_500759.1 Length=416 Score = 309 bits (167), Expect = 6e-83 Identities = 200/216 (93%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 605 AAA-AACTATTTATCCGGCGGGATTCCGGGAGGTTTTAAGTCGACGGAGTATCTTGATCT 663 ||| || ||||| |||||| |||| |||||||||| ||||||||||||||||||||||| Sbjct 174 AAACAATTATTTCTCCGGCCAGATTTCGGGAGGTTTCAAGTCGACGGAGTATCTTGATCT 233 Query 664 CTCGTCAAATTTGATCAAAGGCTCGTTGCCGTCACATTTCAGAGGGAATCGTCTACGCTA 723 ||||||||| | |||||||||||||||||||||| |||||||||||||||| ||||||| Sbjct 234 GTCGTCAAATCTCATCAAAGGCTCGTTGCCGTCACGTTTCAGAGGGAATCGTTTACGCTA 293 Query 724 TTTCAACGCTTCGTACAACAGAATCTCCGGCGAGATTCCGTCAGGTTTCGCCGACGAAAT 783 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 294 TTTCAACGCTTCGAACAACAGAATCTCCGGCGAGATTCCGTCAGGTTTCGCCGATGAAAT 353 Query 784 CCCGGAAGACGCCACCGTTGATCTCTCATTCAACCA 819 ||||||| |||||||||| ||||||||||||||||| Sbjct 354 CCCGGAAAACGCCACCGTCGATCTCTCATTCAACCA 389 > Ahg897165 jgi|Araly1|897165|Al_scaffold_0005_1131 Length=390 Score = 292 bits (158), Expect = 6e-78 Identities = 182/194 (94%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 626 ATTCCGGGAGGTTTTAAGTCGACGGAGTATCTTGATCTCTCGTCAAATTTGATCAAAGGC 685 ||| |||| ||||| ||||||||||||||||||||||| ||||||||| | ||||||||| Sbjct 190 ATTTCGGGTGGTTTCAAGTCGACGGAGTATCTTGATCTGTCGTCAAATCTCATCAAAGGC 249 Query 686 TCGTTGCCGTCACATTTCAGAGGGAATCGTCTACGCTATTTCAACGCTTCGTACAACAGA 745 ||||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 250 TCGTTGCCGTCACGTTTCAGAGGGAATCGTTTACGCTATTTCAACGCTTCGAACAACAGA 309 Query 746 ATCTCCGGCGAGATTCCGTCAGGTTTCGCCGACGAAATCCCGGAAGACGCCACCGTTGAT 805 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| ||| Sbjct 310 ATCTCCGGCGAGATTCCGTCAGGTTTCGCCGATGAAATCCCGGAAAACGCCACCGTCGAT 369 Query 806 CTCTCATTCAACCA 819 |||||||||||||| Sbjct 370 CTCTCATTCAACCA 383 > Ahg944134 jgi|Araly1|944134|scaffold_700363.1 Length=2342 Score = 252 bits (136), Expect = 1e-65 Identities = 385/501 (77%), Gaps = 34/501 (7%) Strand=Plus/Plus Query 1387 AGAGAAAGAGCTTGAAATCGAAACGCTTCTCAAAGCATCAGCTTATATTTTGGGAGCCAC 1446 |||||||||| | || || || || || || || || |||||||||||||| |||||||| Sbjct 1328 AGAGAAAGAGATGGAGATTGAGACTCTGCTTAAGGCTTCAGCTTATATTTTAGGAGCCAC 1387 Query 1447 CGGTTCGAGCATAATGTATAAAGCGGTGCTTCAAGACGGAACAGCTGTGGCGGTTCGACG 1506 |||||||| |||||||||||||| || ||| ||||||||| | | | |||||||| || Sbjct 1388 TGGTTCGAGTATAATGTATAAAGCCGTTCTTGAAGACGGAAGGGTTTTCGCGGTTCGTCG 1447 Query 1507 AATAGCTGA-ATGCGG-TT---T-AG-ACCGGTTT-AGAGATTTCGAAG-CTCAGGTTCG 1557 | | ||| | ||| || | || ||||||| || ||||| | || | || |||| Sbjct 1448 GCTCGGTGAGA-ACGGTTTGAATCAGCGCCGGTTTAAG-GATTTTG-AGTCGCACATTCG 1504 Query 1558 AGCC-GTGGCTAAGTTAATACATCCAAACCTGG-TACGAATTCGCGGTTTCTATTGGGGA 1615 |||| |||| || || | || || || ||| || || || | || ||||||||||| Sbjct 1505 AGCCATTGGC-AAATTGGTTCACCCGAATTTGGTTA-GACTTTGTGGGTTCTATTGGGG- 1561 Query 1616 T-CCGACGAGAAACTT-GTCATTTACGATTTTGTCCCTAACGGCAGCCTCG-CTAACGCC 1672 | ||||||||||| || |||||||||||||||||||||||||||||||||| | ||| || Sbjct 1562 TACCGACGAGAAA-TTGGTCATTTACGATTTTGTCCCTAACGGCAGCCTCGTC-AACCCC 1619 Query 1673 CGTTACCGGAAAGT-GG-GC-TCCTCT-C-CT-TGTCATTTACCTTGGGACGCTCGGCTC 1726 |||||||| |||| || | || ||| | | | ||| |||| ||||| |||||||| Sbjct 1620 CGTTACCGAAAAGGAGGAGGGTCTTCTTCACCGTATCACCTACCATGGGAAACTCGGCTC 1679 Query 1727 AAGATAGCAAAAGGCATAGCTCGCGGGCTAACATA-CGTACACGACAAGAAGTACGTGCA 1785 ||||||||||| ||||| || || ||||| | || | | ||||| |||||| | ||||| Sbjct 1680 AAGATAGCAAAGGGCATTGCACGTGGGCTGGCTTATC-TCCACGAGAAGAAGCATGTGCA 1738 Query 1786 TGGTAACCTCAAGCCTAGCAATATCCTTTTGGGCT-TAGATATGGAGCCTAAAGTTG-CG 1843 ||| ||| | |||||||| || || ||||||||| | || |||||||| ||| | | || Sbjct 1739 TGGAAACTTGAAGCCTAGTAACATACTTTTGGGCCAT-GACATGGAGCCCAAAATAGGCG 1797 Query 1844 GATTTCGGTCTTGAGAAGCTT 1864 ||||||| || |||| |||| Sbjct 1798 -ATTTCGGACTCGAGAGGCTT 1817 > Ahg343889 jgi|Araly1|343889|fgenesh1_pg.C_scaffold_4000231 Length=2310 Score = 246 bits (133), Expect = 5e-64 Identities = 361/467 (77%), Gaps = 31/467 (7%) Strand=Plus/Plus Query 1387 AGAGAAAGAGCTTGAAATCGAAACGCTT-CTCAAAGCATCAGCTTATATTTTGGGAGCCA 1445 ||||||||| |||||| | ||||| || || ||||| || ||||| ||||||||||||| Sbjct 1320 AGAGAAAGAACTTGAAGTTGAAAC-TTTGCTTAAAGCTTCTGCTTACATTTTGGGAGCCA 1378 Query 1446 CCGGTTCGAGCATAATGTATAAAG-CGGTGCTTCAAGACGGAACAGCTGTGGCGGTTCGA 1504 |||||||||| |||||||| ||| |||| ||| | || || || | | | |||||||| Sbjct 1379 CCGGTTCGAGTATAATGTA-CAAGACGGTTCTTGAGGATGGGACGGTTCTTGCGGTTCGT 1437 Query 1505 CGAATAGCTGA-ATGCGGTTT-AG------A--CCGGTTT-AGAGA-TTTCGAAGCTCAG 1552 || ||| ||| | |||||| || | ||||||| || || ||| || || || Sbjct 1438 CGGTTAGGTGAGA-ACGGTTTAAGTCAACAACGCCGGTTTAAG-GACTTT-GAGGCACAT 1494 Query 1553 GTTCGAGC-CGTGGCTAAGTTAATACATCCAAACCTGGTACGAATTCGCGGTTTCTATTG 1611 ||||||| ||| ||| | | || || || |||| || | || || |||||||| Sbjct 1495 ATTCGAGCTATTGG-TAAACTGGTTCACCCGAATTTGGTTCGTCTCCGTGGATTCTATTG 1553 Query 1612 GGG-ATCCGACGAGAAACTT-GTCATTTACGATTTTGTCCCTAACGGCAGCCTCG-CTAA 1668 ||| | ||||||||||| || ||||||||||||||||||||||||||||| |||| | || Sbjct 1554 GGGCA-CCGACGAGAAA-TTGGTCATTTACGATTTTGTCCCTAACGGCAGTCTCGTC-AA 1610 Query 1669 CGCCCGTTACCGGAAAGT-GGGCTCCTCTCCTTGTCATTTACCTTGGGACG-CTCGGCTC 1726 |||||||||| |||||| ||| || || || || |||||||| ||||| | |||||||| Sbjct 1611 CGCCCGTTACAGGAAAGGAGGG-TCGTCGCCGTGCCATTTACCATGGGA-GACTCGGCTC 1668 Query 1727 AAGATAGCAAAAGGCATAGCTCGCGGGCTAACATACGTACACGACAAGAAGTACGTGCAT 1786 |||||||| ||||| | ||||| ||||| | ||| | ||||||||||| | ||||| Sbjct 1669 AAGATAGCGAAAGGTTTGGCTCGTGGGCTTGCTTACCTCCACGACAAGAAACATGTGCAC 1728 Query 1787 GGTAACCTCAAGCCTAGCAATATCCTTTTGGGCTTAGATATGGAGCC 1833 |||||| | || ||||| || || ||||||||| |||||||||||| Sbjct 1729 GGTAACTTGAAACCTAGTAACATACTTTTGGGCCAAGATATGGAGCC 1775 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 93473461230 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5