BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= ATMG00900.1 Length=771 Score E Sequences producing significant alignments: (Bits) Value Ahg480266 jgi|Araly1|480266|fgenesh2_kg.3__2967__ATMG00900.1 1415 0.0 > Ahg480266 jgi|Araly1|480266|fgenesh2_kg.3__2967__ATMG00900.1 Length=769 Score = 1415 bits (766), Expect = 0.0 Identities = 768/769 (99%), Gaps = 0/769 (0%) Strand=Plus/Plus Query 1 ATGTCCGTTTCGTTATTACAACCTTCTTTTTTGATGTCAAAGACCAGAAGCTACGCGCAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGTCCGTTTCGTTATTACAACCTTCTTTTTTGATGTCAAAGACCAGAAGCTACGCGCAA 60 Query 61 ATTCTCATTGGGTCTTGGTTGTTCTTAACAGCGATGGCTATTCATTTAAGTCTTGGGGTA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 ATTCTCATTGGGTCTTGGTTGTTCTTAACAGCGATGGCTATTCATTTAAGTCTTGGGGTA 120 Query 121 GCACCACTAGATCTTCAACAAGGTGGAAATTCTCGTATTCTCTATGTACATGTTCCTGCG 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCACCACTAGATCTTCAACAAGGTGGAAATTCTCGTATTCTCTATGTACATGTTCCTGCG 180 Query 181 GCTCGGATGAGTATTATTGTTTATATCGCCACGGCTATAAACACTTTCTTGTTCCTATTA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GCTCGGATGAGTATTATTGTTTATATCGCCACGGCTATAAACACTTTCTTGTTCCTATTA 240 Query 241 ACAAAACATCCCCTTTATCTTCGCTCTTCCGGAACCGGTATAGAAATGGGTGCttttttt 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 ACAAAACATCCCCTTTATCTTCGCTCTTCCGGAACCGGTATAGAAATGGGTGCTTTTTTT 300 Query 301 ACGTTGTTTACCTTAGTTACTGGGGGGTTTCGGGGAAGACCAATGTGGGGGACCTTTTGG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 ACGTTGTTTACCTTAGTTACTGGGGGGTTTCGGGGAAGACCAATGTGGGGGACCTTTTGG 360 Query 361 GTGTGGGATGCTCGTTTGACCTCTGTATTCATCTCGTTTCTTATTTACCTGGGTGCACTG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 GTGTGGGATGCTCGTTTGACCTCTGTATTCATCTCGTTTCTTATTTACCTGGGTGCACTG 420 Query 421 CGTTTTCAAAAGCTTCCTGTCGAACCGGCTTCTATTTCAATTCGTGCTGGACCGATCGAT 480 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TGTTTTCAAAAGCTTCCTGTCGAACCGGCTTCTATTTCAATTCGTGCTGGACCGATCGAT 480 Query 481 ATACCAATAATAAAGTCTTCAGTCAACTGGTGGAATACATCGCATCAACCTGGGAGCATT 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 481 ATACCAATAATAAAGTCTTCAGTCAACTGGTGGAATACATCGCATCAACCTGGGAGCATT 540 Query 541 AGCCGATCTGGTACATCAATACATGTTCCTATGCCCATTCCAATCTTGTCTAACTTTGCT 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AGCCGATCTGGTACATCAATACATGTTCCTATGCCCATTCCAATCTTGTCTAACTTTGCT 600 Query 601 AACTTCCCCTTCTCAACCCGTATCTTGTTTGTTCTGGAAACACGTCTTCCTATTCCATCT 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 601 AACTTCCCCTTCTCAACCCGTATCTTGTTTGTTCTGGAAACACGTCTTCCTATTCCATCT 660 Query 661 TTTCTCGAATCTCCTATAACGGAAGAAATTGAAGCTCGAGAAGGAATACCAAAACCTAGT 720 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TTTCTCGAATCTCCTATAACGGAAGAAATTGAAGCTCGAGAAGGAATACCAAAACCTAGT 720 Query 721 TCACTCGCTCTCTTTGCATCCATGGCTGAATGGTTAAAGCGCCCAACCT 769 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 721 TCACTCGCTCTCTTTGCATCCATGGCTGAATGGTTAAAGCGCCCAACCT 769 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 28439696082 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5