BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= ATMG00960.1 Length=612 Score E Sequences producing significant alignments: (Bits) Value Ahg931002 jgi|Araly1|931002|scaffold_303459.1 1092 0.0 > Ahg931002 jgi|Araly1|931002|scaffold_303459.1 Length=733 Score = 1092 bits (591), Expect = 0.0 Identities = 591/591 (100%), Gaps = 0/591 (0%) Strand=Plus/Plus Query 22 GCGAAGCGTGTCGTTCGTAATGGAAAGAAAGAGACCACTACTTCGCCTCTTTGTTGGACC 81 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 123 GCGAAGCGTGTCGTTCGTAATGGAAAGAAAGAGACCACTACTTCGCCTCTTTGTTGGACC 182 Query 82 GCCGGCGCGAACACAGTGGTCTCTGATCAGGACCAGGAACCAATTCGAATTTGGATCTTG 141 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 183 GCCGGCGCGAACACAGTGGTCTCTGATCAGGACCAGGAACCAATTCGAATTTGGATCTTG 242 Query 142 ACATGTTGGTGGTTTTTAACCGTAGGCATCTTGCCAGGAAGTTGGTGGGCTTATCATGAA 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 243 ACATGTTGGTGGTTTTTAACCGTAGGCATCTTGCCAGGAAGTTGGTGGGCTTATCATGAA 302 Query 202 TTAGGTCGGGGTGGCTGGTGGTTTCGGGATCCCGTAGAAAATGCTTCTTTTATGCCTCGG 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 303 TTAGGTCGGGGTGGCTGGTGGTTTCGGGATCCCGTAGAAAATGCTTCTTTTATGCCTCGG 362 Query 262 GTATTAGCCACAGCTCGTATTCATTCTGTAATTTTACCCCTTCTTCATTCTTGGACCTCG 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 363 GTATTAGCCACAGCTCGTATTCATTCTGTAATTTTACCCCTTCTTCATTCTTGGACCTCG 422 Query 322 TTTCTTAATATTGTGACTTTTCCATGCTGTGTCTCAGGAACCTTTTCAATACGGTCCGGA 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 423 TTTCTTAATATTGTGACTTTTCCATGCTGTGTCTCAGGAACCTTTTCAATACGGTCCGGA 482 Query 382 TTGCTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGTGG 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 483 TTGCTAGCTCCCGTTCATAGTTTTGCTACAGATGATACACGAGGAATCTTTTTATGGTGG 542 Query 442 TTCTTCCTTCTAATGACCGGCATATCTATGATTCTTTTCTACCAGATGAAGCAGCAGGCA 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 543 TTCTTCCTTCTAATGACCGGCATATCTATGATTCTTTTCTACCAGATGAAGCAGCAGGCA 602 Query 502 TCGGTCCGTAGAACGTATAAAAAAGAGATGGTTGTGGCGCGAAGTACTCTTGTGCATCTA 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 603 TCGGTCCGTAGAACGTATAAAAAAGAGATGGTTGTGGCGCGAAGTACTCTTGTGCATCTA 662 Query 562 CGTCACTCGGCTCGCGCGCAACCCCGCCCCGTTATGTTATGGAAGAATTGA 612 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 663 CGTCACTCGGCTCGCGCGCAACCCCGCCCCGTTATGTTATGGAAGAATTGA 713 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22378152279 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5