BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= ATMG01030.1 Length=321 Score E Sequences producing significant alignments: (Bits) Value Ahg936830 jgi|Araly1|936830|scaffold_501021.1 593 2e-169 > Ahg936830 jgi|Araly1|936830|scaffold_501021.1 Length=518 Score = 593 bits (321), Expect = 2e-169 Identities = 321/321 (100%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 1 ATGCAACAGGTATTCCGTAGAGAAGGTATAAATCTATACTATTATTCAAACAAAACAAAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 177 ATGCAACAGGTATTCCGTAGAGAAGGTATAAATCTATACTATTATTCAAACAAAACAAAG 236 Query 61 AAGTTCTCTCTTGACTCTTGGTACCTGCCTCAGCTGCACCTACTCGAAAGCAAAGGAAAC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 237 AAGTTCTCTCTTGACTCTTGGTACCTGCCTCAGCTGCACCTACTCGAAAGCAAAGGAAAC 296 Query 121 AAGAAAAGCAAGGCAGCTACGGACCAATACTTCATACATCCTTCCCGGACGAGACAAGAA 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 297 AAGAAAAGCAAGGCAGCTACGGACCAATACTTCATACATCCTTCCCGGACGAGACAAGAA 356 Query 181 AGGGATCTTACAGACAGGAAGCACCGCCCGGAACAGCAACAACTACAACGACGGGTAACT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 357 AGGGATCTTACAGACAGGAAGCACCGCCCGGAACAGCAACAACTACAACGACGGGTAACT 416 Query 241 CGCTGGAAAAAAGAAGTCACAACTAGATCAAGACCTAAGGAGACTTCGAGCACACATCTT 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 417 CGCTGGAAAAAAGAAGTCACAACTAGATCAAGACCTAAGGAGACTTCGAGCACACATCTT 476 Query 301 CCCTATCACGGCTCATACTAA 321 ||||||||||||||||||||| Sbjct 477 CCCTATCACGGCTCATACTAA 497 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 11332209933 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5