| Annotation |
|---|
| Description | jgi|Araly1|315545|fgenesh1_pm.C_scaffold_2000578 |
| Sequence |
ATGAAAACCT TATATTCCCT GAGGAGGTTC TACCACGTGG AAACGCTCTT TAATGGAACT TTAGCTTTAG CTGGTCGTGA CCAAGAAACC ACCGGTTTCG CTTGGTGGGC CGGGAATGCC CGACTTATCA ATTTATCTGG TAAACTATTG GGAGCTCATG TAGCCCATGC CGGATTAATC GTATTCTGGG CCGGAGCAAT GAACTTATTT GAAGTGGCCC ATTTTGTACC CGAAAAGCCC ATGTATGAAC AAGGATTAAT TTTACTTCCC CACCTAGCCA CTTTAGGATG GGGGGTAGGT CCTGGGGGAG AAGTTATAGA CACCTTTCCG TACTTTGTAT CTGGAGTACT TCACTTAATT TCTTCTGCAG TTTTGGGCTT TGGCGGTATT TATCATGCAC TTCTGGGACC CGAAACTCTT GAAGAATCTT TTCCCTTTTT CGGTTATGTA TGGAAAGATA GAAATAAAAT GACCACCATT TTGGGTATTC ACTTAATTTT GTTAGGTGTA GGTGCCTTTC TTCTAGTATT CAAGGCTCTC TATTTTGGGG GCGTATATGA TACCTGGGCT CCGGGAGGGG GGGATGTAAG AAAAATTACA AACTTGACTC TTAGCCCAAG TGTTATATTT GGTTATTTAC TAAAATCTCC CTTTGGGGGA GAAGGATGGA TTGTTAGTGT GGACGATTTG GAAGATATAA TTGGAGGGCA TGTATGGTTA GGTTCCATTT GTATATTTGG TGGAATCTGG CATATCTTAA CCAAGCCTTT TGCATGGGCT CGCCGCGCAC TTGTATGGTC TGGGGAGGCT TACTTGTCTT ATAGTTTAGC TGCTTTATCT GTTTGTGGTT TCATTGCTTG TTGTTTTGTC TGGTTTAATA ATACCGCTTA CCCTAGTGAG TTTTACGGAC CTACGGGGCC AGAAGCTTCT CAAGCTCAAG CATTTACTTT TCTAGTTAGA GACCAACGTC TTGGAGCTAA CGTGGGGTCT GCTCAAGGAC CTACAGGTTT AGGTAAATAC TTAATGCGTT CTCCGACTGG AGAAGTTATT TTTGGAGGAG AAACAATGCG CTTTTGGGAT CTGCGTGCTC CCTGGTTAGA ACCTTTAAGG GGTCCTAACG GTTTGGACTT GAGTAGGTTG AAAAAAGACA TACAACCTTG GCAAGAACGA CGTTCGGCAG AATATATGAC TCATGCTCCT TTAGGTTCCT TAAATTCTGT AGGGGGCGTA GCTACTGAGA TCAATGCAGT CAATTATGTC TCCCCGAGAA GTTGGTTATC TACCTCTCAT TTTGTTCTAG GATTTTTCCT ATTCGTGGGT CATTTATGGC ACGCGGGAAG GGCTCGGGCA GCGGCAGCGG GATTTGAAAA AGGAATTGAT CGTGATTTTG AACCTGTTCT TTCCATGACT CCTCTTAACT AA |
| Length | 1422 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 8226943.. 8228364 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | ATCG00280.1 |
| Description | photosystem II reaction center protein C |
| TAIR curator summary | chloroplast gene encoding a CP43 subunit of the photosystem II reaction center. promoter contains a blue-light responsive element. |
| Alias | [PSBC][photosystem II reaction center protein C] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.79583 |
Ahg937125 | Arp2/3 complex, 34 kD subunit p34-Arc |
| 5.09902 |
Virus1877 | |
| 6.63325 |
Ahg937611 | K+ efflux antiporter 4 |
| 10.9545 |
Virus1956 | |
| 15.8745 |
Ahg351649 | Protein kinase superfamily protein |
| 24.1247 |
Ahg923832 | downregulated in DIF1 11 |
| 25.0998 |
Ahg932955 | |
| 27.9285 |
Ahg887772 | Adenine nucleotide alpha hydrolases-like superfamily protein |
| 30 |
Ahg933769 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| 37.9473 |
Ahg322284 | Transducin/WD40 repeat-like superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|