Detail



ID : Ahg324535

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|324535|fgenesh1_pm.C_scaffold_5002079
Sequence
ATGGAAGAAG ATGATGAGAA TAAGTTCCCA AAAGCCTCTG ATGGACACCT CCATGTTGCT GAGAAGCCTA ATGTGGTAGA GAATAGAATA GATGCTTTTG ATTTAGGGAA TTCTAATCTG CAAGGGATTA GCTCAGTTGA TGCGGTCCTC AAGGATGACA CTTTTGAACA GGTTTCTCTA GGAGATCAAG ATAGTTCAGC AACGAGTCTG GATTCTTTCT ACCATCAAGA ATCTGGATAT CCTGTGGTTC ACTCCCCACA GAGGCCTAAA CCAAAGGCTA CAATGCCAAA CGTTTCTCCT GAGTTATTGC ATCTAGTTGA TTCAGCCATC ATGGGTAAGC CTGAGAGCTT AGACAAACTC AAGAATATTG TTAGCGGTGT TGAGAGTTTT GGATCTGGAG AGGATTCAGA GTCTATCGCT TTTCTTGTCA TCGATTCACT TCTTGCCACC ATGGGTGGAG TAGAGAGCTT TGAAGAGGAT GAAGATAGCA ACCCTCCTAG TGTAATGTTA AACTCTCGTG CTGCCATTGT TGCTGGCGAG CTTATTCCTT GCCTACCTTG TTCTGGTGAC AGTGTCAGTT TCATGTCCCC CAGGACCCGC ATGGTGCGAG GATTGCTAGC AATTTTACGT TCTTGCACAA GAAACAGAGC TATGTGTTCA ATGGCGGGTT TATTATGTGT TCTCTTGCGA TCAGTCGAGG AGATAGTATC CAAGGACGCC ACTATGATGT GGAATGGAAC AGTTTTGTTT CACTGTATTC AACATTTAGC CGGGCACTCC CTTAGTGTTG ACGATTTGTA TAGATGGCTT CATGTTATCA AAAAGTCTCT TCCAACAGTG TGGTCAAGTC CATTGATAGA TGCCTTGGAG AAGGCAATGA ATGGAAAGGA ATCAAGAGGA CCTGCATGTA GCTTTGAGTT TGTTGGTGAA AGCTCAGGTT TACTTGGTCC AGGAGAAAGT CGCTGGCCTT TTACCAATGG CTATGCATTT GCAACTTGGA TTTATATTGA ATCATTTGCT GACACATTAG ATGCTTCAAC CGCGGCAGCT GCAATTGCTG CTGCTTCAGC GGCCAAATCA GGAAAAACGT CTAATGCAGC GCCTGCGAAT GTACACACTG GTGAGGGTAC TGCTCATATG CCTCGTCTGT TCAGCTTTTT GACCCCTGAT AATCAAGGAA TTGAAGCTTA TTTCTATGCA CAATTTTTGG TGGTTGAGAG TGGCAGTGGA AAAGGAAGTA AAACTTCACT GCATTTCACT CATGCATTTA AGCCTCAGTG TTGGTACTTT ATTGGCCTTG AGCATACCTG CAATCAGGGA CTTTTAGGGA ATTCAGACAG TGAATTGCGG CTATATATTG ACGGTTCCTT GTATGAAACT CGACCGTTTG AATATCCTCG GATATCCAAA CCGCTTTCTT TCTGTTGCAT AGGGTCAAAT TCTCCTTCTA CAACTGCTGG TCTACAACGT CGTCGACGTC CGTGTGCTTT GTTTGCTGAG ATGGGACCAG TTTATATATT TAAAGAACCG ATTGGTCCTG AAAGAATGAC ACGATTGGCA ACTAGAGGTG GGGATGTTTT GCCTTGTTTT GGCAATGGGG CAGGTCTTCC ATGGTTAGCT ACAAATGACC ATGTCCGTAA TGTGGCAGAG GAAAGTAGCC TTTCGGATGC AGAGCTTGGA GGATACATTC ACCTACTTTA CCATCCATGT CTACTAAGTG GGCGGTTCTG TCCAGATGCT TCTCTTTCTG GAGCAGCAGG CACACAAAGA CGACCAGCTG AGGTAATTGG AAAAGTCCAT GTTGCAACGA GAATGAAGTC AGTGGAGTCC TTCTGGGCCT TAGCTTATGG AGGACCCATG TCTTTGCTTC CTCTAACCGT AAGCAGTGTG CACAAAGATA GTGTGGAGCC ATGTTCTAGA AATGTTCCAT CTTCTTTGAC AACATATTCT CTTGCTGCAC CTATATTCAG AATGATCTCA GTAGCTATTC AACATCCTGG GAACAATGAA GAGTTATCTC GAACCCGGGG GCCTGAAATT CTGGCCACAA TTCTCGGTTA CCTTCTTCAT TCACTTGCAT CCCTTGATCT CCAGCACGAT AGAGTAGGAG ATGAGGAACT AGTTGCTGCC ATTGTTTCTC TTTGCCAATC TCAAAAGATC AATCATGCTC TTAAAGTGCA GCTCTTCCGT ACACTATTGT TGGATCTGAA GATATGGAGT GTGTGCAATT ACAGACTCCA AAAGAAGCTG TTGTCATCTC TTCAAGATAT GGTTTTCACT GAAGCAACAG CTATGAGGAA TGCTGATGCC ATTCAGGTAC TTCTGGATGG ATGTCGAAGA TATTTCTGGA CAATTCAAGA GAAAGACTCT GTGAACACTT TTTCTCTACA TGGGGATGCA CGTCAAGTGG GGGAAGTTAA TGCATTGGTT GATGAGCTTT TGGTGATTAT TGAACTTCTA ATGGGAGCAG CATCTTCTTC GTTTGCTGCT GATGATCTCC ATCGATTACT TGGCTTTATA ATTGACAGTC CACAACCAAA TCAGGTTTCA AGGGTATTGC ATCTCATGTT TAGGTTGGTT GTACAGCCAA ATGCTGCAAA GGCTCAGACA TTTGCAGAGG CATTTATCAC ATCTGGTGGG ATAGAAACAC TTCTTGTTCT GCTGCAGAGA GAAGCTAAAA CTGGTGAGGA CGACGTCGCA GATTCTGTAG CTAAGGGTGA AACAAACGTG CCGACTTATC ATAGTGAACA GAGTTATCAC AATGGGCCTG GTTTATTAAA GCAGTTGGAT TCAGTTCCAC AAGATAATGA GAGTGACCCT CATACTCATG ATGATAATGT AGGATCTTTG AAGGAAACAG AGTCAGTTCA ACAAGAAAAA GCGCATGGAT CCGCAACTGT CATTTGTGAT AGTGACTCAG TTACCATCTC TAATTCCATG AAGGCTGGCA GAATATCCTC TGTTTCTGAA ACTCCATTCA ATAATAATGC AAGAAACAAT GTTGACGATA GAGATCGTGT CATGGTTGGG ATCATCAGAT TGATTGGTGC GTTGACTTCA AAAGGGCACT TAAAATTTTC TGTTGGTGCC AAATCTGATG TAATGAGTAA CCTCATGGGT AGTGATTTTC ATGAAAATGG TGGAACAATG TTTGATGATA AAGTCGCATT GCTTCTATTC GCTCTGCTGA AAGCGTTTCA AGCAGCTCCA AACAGATTGA TGACCGACAA TGTCTACACA ACTTTGCTTG GGGCCTCGGT TAATGCTTCA TCAACTGAGG ATGGCCTGAA CTTTTGTGAT TTAGGTCATC GCTTTGAACA TCCTCAACTT CTGTTAATCC TCTTGCGTTC TCTACCATTT GCATCTAAGG CGCTACAAAA TCGAGCACTT CAGGATATTT TATTTTTGGC TTGTAGCCAT CCAGAAAATA GGAGCAGTCT GACCAAAATG GAAGAGTGGC CTGAGTGGAT CTTGGAGATT TTGATCTCAA ACTACGAGAA GGATGCAGGG AAACAATCTT CTTCACCTGG TTTTGCTGAA GTGGAAGATC TGATTCATAA CTTCTTGATC ATAATGTTGG AACATTCGAT GCGCCAGAAG GATGGCTGGA AGGATATTGA GGCTACAATT CATTGTGCAG AGTGGCTTTC TATTGTTGGT GGGTCTAGCA CTGGGGAGAA ACGAATTAGG CGTGAGGAAT CACTGCCAAT TTTCAAGAGA AGGCTTTTGG GTGGATTGCT AGACTTTGCT GCCAGTGAAC TGCAAGCTCA GACTCAAGTT ATCGCCGCAG CATCTGCTGG TTTCGCGGCA GAGAGCCTAA CACCAAAAGA TGCAAAAGCG GGAGTAGAAA ATGCTGCATT GCTTTCAGTG TTTCTTGTGG AAAATACAGT TGTGATTTTG ATGCTTGTTG AAGATCATTT GCGACTACAA AGCAAGCAAA ATTGTGCTGC AAGCGCAGTT GATGTTTCTC CATCTCCTCT TTCACTTGTT TATCCTCCTA ACTACCGTTC ACATACATTG CCAACGGTCG GAGAATCATC AGAGGTTTCT AGTAGCCGTG CTTCAGTGTC CAGTGATTCA GGAGGGGTCC ATTTAGATAT ACTTGCTTCA ATGGCAGATG CAAGTGGCCA GATTTCTACA GCCGTAATGG AGCGTCTTGC TGCTGCTGCT GCAGCTGAGC CCTATGAATC TGTTTCGTGC GCTTTTGTTT CATATGGAAG TTGTACCATG GATTTGGCTG ATGCTTGGAA GTACAGAAGT CGATTGTGGT ACGGTGTTGG ACTACCTTCT AAAACTAGTT GTTTTGGTGG TGGTGGAAGT GGTTGGGACT CTTGGAAACA TGCTTTACAA AAAGATGCTC AGGGAAACTG GATCGAACTT CCTTTGGTTA AAAAATCAGT ATCCATGCTT CAAGCCTTGC TGTTAGATGA ATCAGGACTT GGAGGTGGCC TAGGAATTTG TGGAGGATCT GGTACCGGGA TGGGAGGGAT GTCAGGCCTC TACCAGTTGC TGGATAGTGA TCAGCCTTTC TTATGCATGC TTCGAATGGT ACTCTTGTCT TTGAGGGAAG AAGACCATGG TGAAGATAGT CTGTTGATGA AAAATTTAAG TTCTGAAGAT GGTATTACTG GTGGAATTCA GTGCCCCTTA GGAAATTCTG CCTCATTAGA TATCAGTTCT CAGTTGTCTA TGCGACAGTC ACCATCAGCT TTATTGTGGA GTGTGCTCTC TCCCATTCTA AACATGCCAA TATCTGATTC AAAGAGGCAG AGAGTATTGG TTACTACATG TGTTCTATAT TCTGAGGTAT GGAATGCTGT TAGCAAAGAC AAAAGACCAC TACGTAAGCA GTATCTAGAG GCTATTTTAC CACCATTTGT TGCAATTCTC CGAAGATGGC GGCCTCTTTT GGCTGGTATT CATGAACTTG CCACTGGTGA TGGTTTGAAT CCCCTTGTCG TTGATACTCG TGCTTTGGCT GCTGATGCCC TTCCCATTGA GGCGGCTCTC TCTATGATTT CTCCGGAGTG GGCAGCTGCT TTTGCATCGC CTCCTTCTGC AATGGCACTG GCGATGATAG CTGCAGGGGC AGCTGGTTGG GAAGCGCCGG CACCTCCAGC AGCTCCAGCG CCTCCACCTC TTAGGCGAGA CACTTCATTA CTTGAGCGTA AGAGTACCAA ACTTCAGACC TTTTCAAGCT TCCAGAAACC CTTGGAGGCT CCAAACGTTG ATACACCAGG TCGACCAAGA GATAAGGCTG CTGCAAAAGC GGCAGCTTTG GCAGCTGCAC GCGATCTTGA ATGGAATGCC AAGATTGGTT CTGGGAGAGG TCTTAGTGCT GTTGCAATGG CCACATCTGC GGCGCGGAGG AATATCAGTG ATATGGAGCG TTTACAGAGA TGGAATATCT CTGAAGCCAT GGGAGTAGCA TGGATAGAAT GTCTCCAACC AGTGGATACA AAATCAGTTT ATGGAAAAGA TTTTAATGCT TTGTCTTACA AATTTATTGC TCTACTTGTT GCAAGCTTTG CCTTTTCACG CAACATGCAG AGATCTGAGA TTGACAGGCG TCTGCAAAAT GATAAAATAG TGAGAAATCG CTTGTGCATG GGAATCCGTG GTTGGCGCAA ACTCGTTCAT CACTTGATAG AGATGAGATG CTTCTTTGGA CCCTTCGGAG ACCATTTATG CAGTCCCAAA CACGTTTTCT GGAAACTGGA TTCTATGGAA AGTTCTTCGA GAATGAGACA ATGTTTAAGG AGGAATTACT CTGGTACTGA TCATCTTGAG ACAACAAGAA ACTATGATGA TCAGACAGAT TTGAAGAATA AGCAGGATGC ACCTGTTCTT GCTGTTGAAG CAATTTCAAA GGAAATAATG TATGAAGATA ATGAACATGG AGATGCCAAT GATCTTGAAA TAGAGGGTAA TGTTGGACAC AAAGGGGAAA ACGAAGAGAG GAGGTCTGGC TCACTTGAGG ATGCAATAAC ACTGTCAACT GGAATCAACG ATCATCGACC TTTGAGTGAA CAGAACATGG TTCAAAATTC TCCAGAAGTT GATCTCAGTG AACTTAAAGA AAGGATCATC CTTGAAATTT CCTCTACTAT GGTCCGACCA CTAGGGGTTG TGAAAGGAAC CTTTCAAATC ACAACACGGA GAATAAATTT TATTGTTGAC ATCAGAGAAG ACCAACATTT GGATGGTAAA TCAGATGGTT TAAAATTAAG AGACAAAGAA AGAGATCGTA GTTGGCTGAT GTCTTCTCTT CATCAGATTT ATAGCCGACG ATATCTACTG AGGAAGAGTG CTCTTGAACT ATTTATGGTG GATCGCTCAA ACTACTTCTT TGATTTTGGG AACACCGAAG GACGAAGAAA TGCCTGTCGG GCTATTGTTC AAGCTAGGCC TCCTCATTTG AAAAATATTT ACTTGGCAAC TCAGAAGCCA GAACAAGTTT CGAGAAGAAC ACAGTTAATG GAGAGTTGGG CTAGATGGGA GATCAGCAAT TTTGAGTACT TAATGCAGCT TAACACATTG GCTGGCCGTA GTTATAATGA CATCACTCAG TATCCTGTTT TCCCATGGAT TTTGTGCGAC TATGTTTCAG AAATTCTGGA CTTATCAAAT CCATCAAATT ACAGGGATCT TTCAAAGCCA ATTGGTGCAC TGAACCCGGA GCGGCTGAAA AAGTTTCAAG AACAATACTC TAGCTTTGAA GATCCAGTTA TCCCCAAATA TCACTATGGT TCACATTACT CAAGTGCTGG AGCAGTGTTG CATTATCTAG CTAGAGTCGA ACCTTTTACA ACCCTTTTGA TTCAACTGCA AGGTCGAAAG TTTGATCGTG CAGACCAAAT ATTTTCAGAC ATTGCAGCCA CTTGGAAAGG AGTTCTCCAA GATATGAATA ATGTGAAAGA GTTGGTTCCA GAGTTGTTTT ACCTTCCTGA GGTGTTGTCC AACGAGAACT TGGTTGAAAA TCTTGATTCT GTAAAACTTC CTCCTTGGGC TAAAAGCCCG ATTGATTTTG TACACAAACA ACGAATGGCT CTTGAGAGCG AGCATGTCTC TGCACATTTG CATGAATGGA TTGATCTCAT TTTCGGGTAT AAGCAACGTG GTAAGGAAGC TACACTGGCC AATAATGTTT TCTTCTACAC TACCTACGAG GGGACTGTTG ATATTGATAA GATCACAGAT TCAGTACAAC AACAGGCTAC TCAAGACCAG ATAGTTAATT TCGGGCAAAC TCCTTCGCAG CTATGGACTG TGCCTCACAT CAAAAGAATG CCTCTAAAAG ATGTCCTTCA TATGCAGACC ATCTTCCGGA ATCCAAAAGC GATAAAACCG TATCCTGTTC CAGCTCCAGA ACACTGCAAC TTACCTGCTG CAGCCATCAA GGCATCTTCG GATACTGTTG TGATTGTTGA CATGAATGTG CCTGCAGCAC ATATTGCACA GCACAAGTGG CAACCAAACA CTCCTGATGG CCAAAATGCT CCTTTCATCT TTCATCACGG AAAGCCGAGT TCAACTGGCG GAACATTGAT ACGCATGTTC AAGAGTGATT GGGAATATCC CCAAGCACAA GCATTTGCCT CATTAGGAAT CAGAAGTTCG TCTGTCACTG CTATCACTAA CGATGGAGAA ATTATCACTG GCGGACATGT GGATAATAGC ATCAAGATAG TCTCATCTGA TGGAGCGAAA ACACTAGAAA CAGCTTTTGG TCACTCTGCT CCTGTAACAT GTCTGGCTCT GTCTCCAGAC AACAACTTCC TTGTGACAGG TTCACGAGAT ACAACTGTTT TGTTGTGGAG ATTTCATAAG GGATTCACTT CTCAGACAAG CGAGTCTGAG CAGACAACAA GCTCTGTAAC ATCTTCCTCC GCAAGCAGCA ACAACTTGGC GAACAAAGCC AAAAAGCATC GCATTGAAGG GCCCATACAA GTGCTCCGTG GCCACCAAAG AGAAATAAGT TGTTGCTGTG TTAGCTCAGA TCAAGGAATC GTCGTTTCCT GCTCAGAGTC ATCAGATGTT CTATTGCATT CCACAAGAAA AGGTCGACTA ATAAGACGGC TTGTTGGCGT TGAGGCCCAT GCTCTTTGCA TTTCTTCAGA TGGAGTTATA GTAGTCTGGA GTAGATCAGA AAGTTGTATC AGCACGTTCA CCATTAACGG AGTTCTCATT TCCAAAGCAA GACTTCCTTC CTCTTGTACC ATAAGCTGCA TGGAACTATC CATGGACGGA CAAAATGTTG TGATTGGTGT GAACTCATTT TTCGACATTG ATGGATCGAG GAGTTTTAAT ATCCTTACTG GTGAAGAAGA TTCATCAAAC AGAAGCAAAG AAGTTGAGAG ATTGAATATA CCATCTCCTT CAATTTGCTT CCTCAACTTA TACACTCTTC AGGTGTTTCA TGTGTTGAAG CTTGGTGAAG GGCAGGGTAT AACCACTATG GCTCTGAATA CAGACAACAC TAACCTCTTA GTTTCCACAG AAGATAAACA GTTGATCATC TTCACCAATC CAGCTTTAAG CTCGAAGTTG GTGGATCAGA CACTGAAGCC TGGCTCGGAA TGA 
Length8583
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18984019.. 18996879
Download Sequence
A.thaliana
AGI-codeAT2G45540.2
DescriptionWD-40 repeat family protein / beige-related
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.9164 Ahg323966
24.0832 Ahg921700 ENTH/VHS/GAT family protein
24.8998 Ahg900119
25.3969 Ahg316947 Pectin lyase-like superfamily protein
28.1069 Ahg931324
30.5941 Ahg929770 Protein kinase superfamily protein
30.7571 Ahg335577 tryptophan aminotransferase related 1
35.4965 Ahg484914 transposable element gene
42.7083 Ahg314065
43.0581 Ahg342636 AP2/B3-like transcriptional factor family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression