Detail



ID : Ahg490396

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490396|fgenesh2_kg.6__3530__AT4G01830.1
Sequence
ATGAAGATGG GGATATTGGA AGAGAACACA AAGACTGTAC CGTTCTACAA ATTGTTTTCC TTCTCAGATT CTACCGATGT GTTGTTGATG ATTGTTGGTT CGATCGGAGC TATCGTAAAC GGTGTTTGTT CTCCGTTAAT GACATTATTG TTTGGTGATC TCATTGATGC ATTGGGTCAA AACCAAAACA ACGAAGAGAT TGTTGAGATA GTTTCCAAGG TTTGTTTGAA ATTTGTCTAC CTTGGACTTG TAGCACTTGG AGCAGCCTTT CTTCAGGTGA CTTGTTGGAT GATTACTGGG AAAAGACAAG CTGCAAGAAT AAGGAGTTTG TATCTAAAAA CGATTCTAAG ACAAGACATT GGATTCTTCG ATGTCGAAAT GAGCACCGGA GAAGTTGTTG GTCGAATGTC TGGTGATACT GTTCTTATAC TTGATGCTAT GGGTGAGAAG GTTGGGAAGT TTATACAGTT GATTGCAACA TTCTTTGGTG GATTTGCTAT AGCGTTTGTG AAAGGATGGT TACTTACACT TGTTATGTTG ACCTCAATTC CTCTTCTAGC TATGTCTGGT GCAGCTATAG CGATTATAGT TTCTAAAGCT TCGTCTCGAG AACAAGCTGC TTATGCGAAA GCATCAACTG TTGTTGAACA AACTTTGGGG TCTATTCGAA CCGTTGCTTC TTTCACGGGA GAGAAGCAAG CGATGAGTAG CTACAGAGAA TTGATAAATT TGGCCTATAA ATCGAATGTT AAGCAAGGTT TTGTTACGGG TTTAGGTCTT GGAGTACTGT TCTTGGTGTT CTTTTGTACT TATGCTTTGG GTATATGGTT TGGTGGTGAA ATGATACTCA GAAAAGGGTA TACAAGTGGT GCAGTGATCA ATGTAATGGT CACTGTAGTC ACGAGTTCGA TGTCTTTAGG GCAAGCAACG CCTTGTCTTA CTGCATTTGC GGCTGGTCAA GCTGCAGCTT ATAAGATGTT TGAGACGATC AAAAGAAAGC CTTCGATTGA TACTTTTGAC CTAAATGGGA AGGTTTTAGA AGATATTCGA GGCGTAATTG AACTGAGAGA TGTGTGTTTT AGTTACCCTG CCAGGCCTAA AGAAGAGATT TTTGGCGGAT TCTCTCTGCT GATTCCGAGT GGTGCAACCG TTGCTTTGGT AGGAGAAAGC GGGAGTGGGA AATCTACTGT GATCAGTTTG ATTGAAAGGT TTTATGATCC GAATTCCGGC CAAGTGCTTA TTGATGGTAT TAACTTAAAG GAGTTTCAGT TGAAATGGAT TAGGGGAAAG ATTGGATTGG TCAGTCAAGA ACCTGTTCTG TTTTCTTCTA GTATAATGGA GAATATCAGG TACGGGAAAG AGAGTGCAAC GGTTGAAGAG ATTCAAACAG CAGCAAAGCT AGCAAACGCG GCTAAGTTCA TCAATAAGTT GCCTCGAGGT TTAGAGACTT TGGTAGGGGA ACATGGAACT CAACTCTCAG GAGGGCAGAA ACAGAGGATT GCTATCGCGA GGGCGATCCT TAAAGATCCG CGGATCTTGC TGTTAGATGA AGCTACTAGC GCTCTTGATG CGGAATCCGA AAGAGTGGTT CAAGAGGCTT TAGATAGGGT AATGGTGAAC CGGACTACTG TGATTGTCGC GCATCGGTTA AGCACAGTGA GAAATGCTGA TACGATTGCT GTGATTCACC GTGGAAAGAT AGTGGAAGAA GGTTCACATT CAGAGTTACT TAAGAATCAC GAAGGGGCTT ATTCACAGCT TATACAGTTA CAAGAGATAA ACAAAGAATC AAAGCGATTG GAGATTTCTG ATGGATCAAT CAGCAGTGGA TCATCAAGAG GAAACAACAG CAGAAGGCAA GATGATGACT CTGTTTCGGT TCTTGGTTTA CTTGCAGGCC AAGAGAATAC TAAAAGGCCT CAAGAACTGT CACAGAATGT GTCGATTACT CGAATCGCTG CTCTAAACAA ACCTGAGATT CCAATTCTTA TACTTGGAAC CTTAGTGGGT GCAGTGAACG GCACTATATT CCCCATTTTC GGTATCCTCT TTGCTAAAGT AATCGGAGCT TTCTTCAAAG CGCCTCAAGA GCTGAAGAGA GATTCGAGAT TCTGGTCGAT GATATTCCTA CTTCTTGGTG TAGCCTCTTT GATAGTGTAT CCAACGAATA ACTACTTGTT TGCTATAGCT GGAGGGAGAC TGATTCGGAG GATAAGATCA GTGTGTTTTG AGAAAGTTAT TCATATGGAG GTTGGGTGGT TCGATAAACC TGAGAACTCG AGAGGTGCAA TGGGAGCGAG GCTCTCTGCT GATGCAGCCT TGATCAGGAC ACTTGTGGGA GACTCGTTGT GTCTATCGGT TAAGAACGTT GCGTCTCTGG TGTCAGGACT AATCATAGCT TTCACGGCGA GCTGGGAATT GGCGGTTATT GTCGTAGTAA TTATTCCATT AATTGGAATC AACGGTTATG TTCAAATTAA GTTCATGAAA GGCTTCAGTG CAGACGCAAA GAGAAAGTAC GAGGAGGCGA GTCAGGTGGC AAACGATGCG GTGGGGAGTA TAAGAACGGT TGCGTCTTTC TGTGCGGAGG AGAAAGTGAT GGAGATATAC AATAAAAGAT GTGAAGATAC GTTTAAATCT GGGATTAAGC AAGGGTTAAT CAGCGGATTA GGGTTTGGTC TCTCTTTTTT CATTCTTTAC TCTGTCTACG CTACTTGTTT CTACGTGGGT GCTAGATTGG TTAAAGCCGG AAAGACAAAC TTCAACAATG TTTTTGAGGT TTTCTTAGCC TTAGCGTTGA CAGCGATTGG GATATCTCAG GCGAGCTCTT TTGCTCCTGA TTCGAGTAAA GCAAAGGGTG CTGCTGTTTC TATTTTCAGA ATTATTGATG GGAAATCGAA GATAGATTCG AGAGATGAAT CAGGAATGGT GTTGGAGAAC GTAAAGGGAG ATATCGAGCT TTGTCACATA AGCTTCACTT ACCAAACTAG ACCTGACGTT CAGGTCTTTC GTGACCTCTG TTTGACCATT CGTGCCGGAC AGACTGTTGC TTTGGTTGGC GAAAGTGGGT CGGGTAAATC TACGGTGATT TCACTGTTAC AAAGGTTTTA CGATCCGGAT TCGGGTCATA TAACTCTAGA CGGAGTGGAG CTCAAGAAGC TGCAACTAAA ATGGCTGAGA CAACAAATGG GGCTTGTAGG GCAAGAGCCT GTACTGTTCA ACGACACGGT ACGAGCCAAC ATTGCTTACG GAAAAGGCGG CCAGGAAACA ACCGAGACTG AGATTGTAGC TGCCTCGGAG CTGGCTAATG CCCACACGTT CATCTCTAGT ATACAACAGG GTTATGATAC GGTGGTAGGG GAGAGAGGGA TACAATTGTC AGGAGGACAG AAGCAACGTG TGGCGATTGC ACGCGCCATC GTGAAAGAAC CGAAGATTCT GTTACTTGAC GAAGCGACGA GCGCTTTGGA CGCTGAATCG GAGCGGGTGG TTCAAGACGC GCTTGACCGG GTGATGGTGA ACAGGACCAC CGTAGTAGTG GCTCACAGGC TTTCGACGAT CAAGAATGCT GACGTCATCG CCGTCGTCAA GAACGGTGTG ATCGTAGAGA AAGGGACGCA CGAAACGTTG ATCAATATCG AAGGTGGTGT TTATTCTTCG CTTGTTCAAC TTCACATTAG TGCTTCTAAT TGA 
Length3693
Protein Sequence
Protein Residue
Map Locationscaffold_6: 22605125.. 22608090
Download Sequence
A.thaliana
AGI-codeAT4G01830.1
DescriptionP-glycoprotein 5
TAIR curator summary
Alias[ABCB5][PGP5][ATP-binding cassette B5][P-glycoprotein 5]
Gene coexpression
MR
MR Locus Description
6.16441 Ahg351608 Protein of Unknown Function (DUF239)
7.93725 Ahg477013 Terpenoid cyclases family protein
9.8995 Ahg323966
19.2873 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
22.5832 Ahg338146 KNOX/ELK homeobox transcription factor
24.3926 Ahg478320 GDSL-like Lipase/Acylhydrolase superfamily protein
27.7128 Ahg484914 transposable element gene
29.0689 Ahg351609 Protein of Unknown Function (DUF239)
30.8545 Ahg485911 Papain family cysteine protease
33.4365 Ahg929222 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression