Detail



ID : Ahg891936

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891936|Al_scaffold_0007_3922
Sequence
ATGGATTCTT CTTTTCTCTC TAGTTTTTGT GTTGCTGCCA TAACTTTCTT CACGCTTTTG GGTACAATAT ATTTCATGTT TTATAGAAAA GTCAAATCCC ATCAAGAAAA CAAAACAATA GCTTCTTCTC CTTCTTCTTT ATCTCTTTCA TCTACTCCAT CTTCTTTGTC TCGAAATCGG AAACACGATG TCTTCCCCAG CTTCCACGGG GCAGATGTTC GCAAAAACTT TCTTGCTCAC ATCCTAAAAG AGTTCAAAGG AAAGGGAATC GTTCCATTCA TTGATAATGA TATCGAGAGG AGCAAGTCTA TCGGTCCTGA GCTCATAGAA GCTATAAAAG GATCGAAGAT CGCGATCGTC TTGCTCTCGA GGAACTACGC TTCTTCGTCT TGGTGCTTAA ACGAGTTGGT GGAGATCATG AATTGTAGAG AAGAGTTGGG TCAAACAGTG ATGACCATTT TCTATGACGT TGATCCAACA GACGTAAAGA AGCAGACAGG AGATTTTGGG AAGGTCTTCA AGAAAACGTG TAAAGGTAAA ACCAAAGAGG ACATTAAGAG ATGGCAAAAC GTTTTGGAGG CTGTGGCAAC AATCGCTGGG GAGCATTCCT GTAACTGGGA TAATGAAGCA GCCATGACTG AAAAAATCGC CACTGATGTT TCAAACATGT TGAATAGATA CTCACCGTCA AGAGATTTTG ACGGTTTCAT TGGGATGGGG GCTCATATGA ACGAAATGGA ATCGTTGTTA TGCCTAGACT CTGATGAAGT AAGGATGATT GGGATTTGGG GTCCGTCTGG GATAGGGAAG ACTACCATTG CCAGAGTCTT ATATAGTCAA TTTTCTGAAA ATTTTGAATT GAGTATCTTC ATGGAGAATA TCAAGGAATT GATGTATACA AGACCAGTGT GTTCTGATGA GTATAGTGCA AAGATTCAGT TACAGCAACA GTTTTTGTCC CAAATAATCA ACCACAAGGA TATGGAGCTT CCTCATTTAG GAGTTGCACA AGATAGGTTG AACGACAAGA GGGTGCTTAT TGTTCTTGAT AGCATTGATC AATCAATACA ACTAGATGCT ATCGCAAAAG AAACTCGGTG GTTCGGTCAT GGAAGTCGGA TTATCATCAC AACACAAGAC CAACGGCTTT TGAAGGCACA TGGCATCAAC CATATTTACA AGGTGGAGTT TCCATCAGCA TATGAAGCTT ATCAGATCTT TTGTATGTAT GCTTTTGGCC AAAACTTCCC TAAAGATGGT TTTGAGGAGC TTGCGTGGCA AGTTACAAAA CTTTTAGGTA ATCTACCTTT GGGACTAAGA GTTATGGGAT CCCACTTCCG AGGAATGTCT AGGCATGAGT GGGTAAATGC ATTACCAAGG TTAAAGATTC GCCTTGATGC TAGTATTCAA AGCATTTTAA AGTTCAGTTA CGATGCCTTA TGTGATGAAG ATAAAGATTT ATTCCTTCAT ATAGCCTGCC TTTTCAACAA TGACGGAATG GTGAAAGATT ATCTTGCTTT AAGTTTCTTA GATGTGAGGC AAGGGCTTCA CCTCTTAGCT GAGAAATCTC TCATAGCATT AGAGATTTTT TCTGCTGACT ATACACATAT AAAGATGCAC AATCTATTAG TGCAATTAGG TAGAGACATT GTCCGTCATA AGCCTGGGCA CCAATCCATT TGTGCGCCTG GGAAGCGTCA ATTTTTGGTT GATGCTAGAG ATATTTGTGA AGTACTCACT GATAACACGG GTAGTAGAAA TGTTATAGGT ATACTTTTCG AGGTATATAC CCTATCAGGC GAATTAAATA TCAGTGAGAG AGCTTTTGAA GGAATGTCTA ACCTCAAGTT CTTAAGATTC CATGGCCCAT ATGACGGCCA AAGCGATAAA TTGTACTTAC CGCAAGGGTT GAATAATCTA CCTCGGAAAC TTAGAATACT AGAATGGAGC CATTTTCCAA TGAAATGTTT GCCTTCCAAT TTTTGTACGA AGTATCTAGT CCAGCTATGT ATGGGGTACA GCAAACTTCA GAACTTGTGG CAAGGAAATC AGGTGTCAAA AAGGAGTGAT CTTCCGGTGC TTGGTAATCT CAAGAGGATG GATTTGTGGG AGTCTAAACA CCTAAAAGAG TTACCTGATC TCTCAACTGC CACTAACCTT GAGAAATTGA CTCTGTTTGG ATGCTCAAGT TTGGCGGAGC TCCCCTCCTC TCTTGGAAAC CTTCAGAAAT TGCGAATGTT GAATTTACGA GGATGCTCAA AGCTAGAGGC TCTTCCTACT AATATCAACT TGGAATCTCT CGATGACCTT GATCTCGCTG ATTGCTTACT GATCAAAAGT TTTCCTGAGA TCTCTACAAA CATTAAGGAT CTCATGCTCA CGTACACTGC AATAAAAGAA GTGCCTTCGA CGATCAAGTC ATGGTCTCAT CTTCGTAACT TGGAAATGTC ATACAATGAC AATCTCAAGG AATTCCCACA TGCTCTCGAT ATCATCACAA AGCTTTACTT TAACGATACA GAAATACAAG AAATTCCTCT GTGGGTTAAG AAAATCTCTC GTCTTCAGAC ACTTGTACTA GAGGGATGCA AGAGGCTGGT AACAATCCCA CAACTTTCAG ATTCCTTATC AAATGTAACA GCCATAAATT GCCAGTCACT GGAGAGACTT GATTTCTCCT TTCACAATCA TCCAAAAATA CTTCTCTGGT TTATTAATTG CTTCAAGCTG AATAATGAGG CGAGAGAATT CATCCAGACT AGTTGTACCT TCGCATTCTT ACCCGGTAGA GAAGTTCCCG CAAACTTCAC TTACCGAGCT AATGGGAGTT CCATAATGGT AAATTTGAAT CAAAGGCGCC CTCTTTCTAC GACCTTGAGA TTTAAGGCTT GCGTCTTGTT GGATAAAAAA GTTGACAATG ACAAGGAGGA GGCCGCCGCT AGGGTAACAG TTGTGTTTCT GAGCATCAGG GAGAAAGGTA AAATTGGCGT CACTGTTTCA TGGAGACCTG GATATCCCTT TCACGTGCCT CCCATTTTAA GAGAGCATTT GCTCATCTTT GAGTTTGAAG CTGATGTGAC GTGCAACGAG CTTTTATTTT CGTACGACAT CATCGGAGAA TGTGGAGCGG TGATAAAAGA ATGTGGAGTA CTCCAACTCT AA 
Length3162
Protein Sequence
Protein Residue
Map Locationscaffold_7: 22668616.. 22672355
Download Sequence
A.thaliana
AGI-codeAT5G38350.1
DescriptionDisease resistance protein (NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6 Ahg926360 F-box and associated interaction domains-containing protein
12.083 Ahg931131
12.9615 Ahg943458 gamma carbonic anhydrase 3
21.4942 Ahg924931
29.2404 Ahg905680
31.3847 Ahg349641 RNA-binding (RRM/RBD/RNP motifs) family protein
43.1277 Ahg895267 glutamine synthetase 1.3
50.5569 Ahg924089 F-box and associated interaction domains-containing protein
60 Ahg888008
62.9921 Ahg894204 glutamine synthetase 1.3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression