Detail



ID : Ahg900412

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900412|Al_scaffold_0004_1062
Sequence
ATGGGTGGTT TGGCTATGGA GGAAATGCCT TTATCGGCGC TATTCGAGCA AGCTAGGAAA ATTCATCTCG CTGCTTCAGA GTCCGGTGTT GATCAGGATG TTGTGAAGAA AGGATGTGAG ATGTTTCAGA AGTGCGAAGA CATGATCGGG AAGCTGGCGC TGTTTTCGTC TAACGAGACT AAAGAAGATA TTAGCACCAA CAATCTCAAA TATCTTTTGG TACCTTATTA CCTTGCGGAG TTGACAGAGA AAATCATACA GGACGACCGG ATTCCGATTG TCAAAGCCTC GTATGCAAAG TTGAAGGAGT TCTTTTCGTT ATGTGAGGCA ATGGAACTTG TTCCGGATGA GGAGTTGGAG GCTTCTTCAC GAGGAGGTTC TGGTGCACCT GCTGATCGTA GGGCTCTGAA GGTAAGATTT AGCCCTGTTT CTTTCGTTTA TATTCTGACG AGAATGAAGT TTAAGGTTTT CGGATTTTGA 
Length480
Protein Sequence
Protein Residue
Map Locationscaffold_4: 10807530.. 10815692
Download Sequence
A.thaliana
AGI-codeAT5G53000.1
Description2A phosphatase associated protein of 46 kD
TAIR curator summaryPP2A-associated protein with a possible function in the chilling response
Alias[TAP46][2A phosphatase associated protein of 46 kD]
Gene coexpression
MR
MR Locus Description
19.4422 Ahg934705 U12; snRNA
27.6225 Ahg921207
37.0135 Ahg916260
58.2752 Ahg927040
72.1803 Ahg483935 Pollen Ole e 1 allergen and extensin family protein
76.9545 Ahg471161 zinc finger protein 5
80.4114 Ahg938457 Plant self-incompatibility protein S1 family
81.5353 Ahg334440 Pentatricopeptide repeat (PPR) superfamily protein
88.7694 Ahg937202
89.8499 Ahg935947
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression