Detail



ID : Ahg900584

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900584|Al_scaffold_0004_1234
Sequence
ATGGAGCAGC CTTATACTTT TCTGCAAGAT GTTGAGAGCG TAAAACTCCA CGAAAAGGCA AAAGAACTCT TCGCTAATGG AGATCACATC AAGGCCTTGG AGATAATTGA AGATATGATT TTGGTCAATA AGGAAGACAA GAACATATGG TTTCTTCATG CGGAACAAGG TTATATGTTA AAGAAATTAT CGGATAAAAC AGATAACTTT GACGTAGATT TCACATTTTT GTTGGGTTCT GTTGGATGTT TTTCGGAAGA TGTGAAGTTA TTAAGATCTT GCGCACATGG ATTCTACAGT TTGGCACACC AAATTGAGTC AGTGATGTAT TACAAGAAAT GTTTGAAGAA AGCAAAACAG GTTTTATCTG TTTCTAACCC GAATGAAGAC TCGGGTTCTT CTGTTGCCCA AATGAGTTTG CGATGGAAAG CACATAAGAG CAAAACGGAT AAAGACCTGG AGAGTTTAAT AAAAAATGCA GAGTCCAAGA TTGCTCTTAT CAAGACTGGA GGACTGAAGG ATTTACTAGA AGAAGAATGT GAGTCAGAAG ATTTGGAGTC AAAGAATAGT CCAGAGCCGG CAAAGAACGA GTTTAAAAGC TTGAGGTCGT TTTGGTTAGG TTTGGATGTT AAGGTCAAAA GGGATTTTAT GAAAGTAAGC GTTGCAAAGC TTATAAGTTT TGTCGAGGGA GTACATGAAA GACCGGGACG AGATGCTTTG GAGAAAATTC TCGATTCTGC CAGGGAAGAC AGAAAATGGA CATTCTGGAT GTGCCGAACT AAATGTTCGA AGAAGTTCTC TAGTGCTGAA GAATGTAAGA GTCATCTTGA AAGCGAACAT GCTGCAGATT TTAAACCTTT GAAAGAGGAG GATAGAATCA AGAGGATAGG GAAAGACTGG GCTCGTAAGA TATTGGTTGG AGGTTGGGAA CCAGTGGATA CAGTAGCTGC CGTTGAAATG ATCAAAAATC GGCTCGCAGC TGTGAAAGCG TTTTCATATA AGAATGGATG GTCCAAAGAA TGGCCTTTAG CTGTGGATGA AGAGCGCAGT AAGTTACTCA AGGAAATCAA ATTCTTCCTT GGGATGTTTT GTGACCTTAA AATTCTCCCT TGCAGTGTTC GAGACTGTGT GATGCAATAT CCTTTAAGGC ATTTTGGAGA ACTTGAAGTT TCCAAACAGA GTCTTGTCGA TTCTCACCTA GTGGAAACAC CTCAGAGTAT ATGTTTTCTG GATTGTCATG AACTCAATCA AATCCTAAAC TTTCTAAAAC GCATCAAGTC CGAAAGGGAT GATGGTATAG ATCTAGTTTC CAGAGCAGTG GACAGTATCT TGTGTTCTAC TCAAGTTAAA GAAAAGATTG ACTTTGACCC TCAGTTTTCA TTGCTGCTTC TGGACAGAAG ACTGCTGAAA AGCAATAATC CTCCATTTGA TGATGAAGGA ACAATCAATG TTTTTGATCC CAATGTTCAC TACGCCAAGG CACCAGCTCA GGGAGATGAT ATCATATCCT GGTTAACTGA CTACAATTCA GTAGAGAAGA CTTTTCCCAG ACCTATCAGG GAATATAATC TTGATATCTG GGTGGCTGTT CTGAGAGCTG TTCAGTTCAC ATGTAGAACT CTGGAAACCA AATATGCAAA GAAAGTGCAG GTCTTCAATT ATTATGTAGC TCTTACTGAC GTTGAAGACT TGTGTATCAG TGAAGATGAA AGGAGAAGGA ATCTTCAGGA AGATCAGTGG AATAGCTATG CATCTCTTCT ATGCGATAGA TGCGAAGAGA GAGTCCCCGG AAATTCCCTC ACTAACAAAT TATTTGTGTG TGCAGTACGA GATGTTCTCG AAGGCGCATT GTATCTGACA TTTGATTTCC CCGATTTTGA AGAATGCCTG AATCTTATAC GTGGGCGTAA AGGTCTCAGC GATGATATAG TGTTGAAGTC CATAGACTCT CTGAAATCAG TGGCCACCTC CAAGGGTATT TTAATCGATT CAAAGATTTT GCTGGTTGAT AATTCAAGGA TTAGTTTGCT GAATGACCTC ACCAGGCTTT CTGTTTTTGA CAACCGCACT TATATCCTTG AACTGCTGAA AAAGTTCTTG CTGAAAACGT CAACGAGCAC CTCTAGTTCT CTTTCTAAGA CCGGTGAACA TAAACCTTCT GACATCCTTG AACCGGAAAG CACGTCTCCA TCACTAGGAA AGGTAGAAGA AGATTCTATG GAACCAGATG CCACTCTTTC ACGTGAAACG GGTCGATTGG AAATCTCATC CAACACTGTC AATCGAGAGG AAGTTATGCC TAGGGAAGAA TCACAGTCGG AACATTTAGA GTCAACTCTT GGAGAAGCTG CAACCAGATA TAATTCAGCT CTTGACATGA CACTGAAGGC CCTTTTGAAC ATTCAAATTC TCAAAGAAGA TTTGATGCAA CCATTTCAAG ACCACCCGGA AGAACATGTT CCTCCTGCTC TACGAAATTT CTTTACTGCT TTTGTGTCAG ATGTGATAAA TAATGAGGGA GTCTACAGTT GCCTCTTGCG TGACTTACTT TCTTCCCTAG AAGAAGTTAT TTCCATGTCG AGTGGTGCTG CTGAGGTTCT TGTAGCCATC CTTGAGTTTT GGCATTGCTG GAAGAATGCT AAAAGAGAAA GCTTGGTAAC TCGTCTTTTT ACGTTGGAGG AAAATGAAAG AATGAGTTGT AGAAAATGCA GAAAGAAACC AAATTATCCA GAGCAAAGTT CTTATGGCAT TGTTATGGCT GCAGATTCTA TCAGAGACTT GAAGTGTGCT CTTGGGAATA TAGAGTTTGT GGATATCCTT AAGGTGATTC AGATGGAATA TAAAATGCTA TGTGACGTTA AAACAGGAGG CTGTGGAATA ACAAACTTCG TTCATCACAT CATAAGTAAA TGCCCACCTA TCTTCATAAT CGTGTTAGAA TGGGAGAAGA GTGATACAGA AAAAGAAATA TTTGACACAA CAAAGGCTTT GGACTGGGAG ATAGATATCA GTAGACTGTA CGAAGGCTTA GAACCAAAAA CTAACTACCG GCTTGTGTCA ATGGTTGGTT GTGGTGAAGA AGAAGCAGAA CACGTTTGCA TAGTTTATGA AAAGAACTGT TGGGTCAATC TCAGACGTGA TGCTTTAACT GGAGAGGATG TTGGTAACTG GAAGAGTGTG GTTAAATTCT GTGGGGAGAA GAAGGTTCGG CCAGAGATTC TGTTTTATGA AGCTGCTGCC CGCTCGATGT CCTAA 
Length3255
Protein Sequence
Protein Residue
Map Locationscaffold_4: 11939060.. 11943417
Download Sequence
A.thaliana
AGI-codeAT2G27630.1
DescriptionUbiquitin carboxyl-terminal hydrolase-related protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
28.931 Ahg930374
67.513 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
73.9797 Ahg480358 Glycosyl hydrolase superfamily protein
75.5248 Ahg946267
80.0312 Ahg323966
99.96 Ahg351609 Protein of Unknown Function (DUF239)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression