Detail



ID : Ahg914883

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914883|Al_scaffold_0001_5137
Sequence
ATGGCTTCTC CTTCTTCTCT CAAGTCTCGT AATTACAGAT TCAACATCTT CTCGAGCTTC CACGGGCCCG ACGTCCGTAA ATCATTTCTC AGTCACTTGC GCAAACAGTT TAACTACAAC GGGATCACAA TGTTTGATGA TCAAGGGATT GAAAGAAGTG AGACAATCGC GCCTTCACTC ATACAAGCGA TAAGAGAATC GAGGATCTTG ATTGTGATTC TCTCAACTAA CTATGCTTCT TCAAGTTGGT GTTTGAATGA ATTGGTGGAG ATTATGGAGT GCAAGAAAGT TATGGGACAG ATAGTGATGA CCATATTTTA CGGAGTGGAT CCAACCCATG TAAGGAAACA AATCGGCGAT TTTGGGAAAG CTTTCAGTGA AACATGTTCT CGTAATACCG ATGTGGAGAT GCGGAAATGG AGCAAAGCTT TGACTGATGT GAGTAACATA CTCGGAGAAC ACTTACTAAA CTGGGACAAT GAAGCAAACA TGATCGAAAA GGTTGCAGGA GATGTTTCTC GCAAACTAAA TGCTACACCG TCTAGGGATT TTGCAGACAT GGTGGGACTT GAAGAACACT TGAAGAAAAT TGAGTTTTTA TTACATTTAA ATCATGATGA TGGAGCTATG ATTGTTGGAA TCTGTGGCCC TGCAGGCATT GGTAAGACTA CTATTGCTAG AGCTTTACAT AGCCTACTCT CTAGTAGTTT TCAGCTTAGT TGTTTTATGG AGAATCTTAG GGGAAGCTAT AATAGTGGTC TTGACGAGTA TGGATTAAAG TTGTGTCTAC AACAACAACT TCTTTCAAAG ATTTTAAACC AAAACGGTAT GAGGGTATAC CATTTAGGTG CGATACATGA AAGGCTATGC GATCGAAAAG TGCTTATCAT TCTTGATGAT GTGAATGATC TTAAGCAGTT AGAGGCTTTG GCTGATGAAA CTAGGTGGTT TGGTCCTGGA AGCAGGATTA TCGTAACCAC AGAAGATCAA GAGCTTTTGC AGCAGCATGG TATCAATAAT ACATACCAGG TGGGTTTCCC ATCTAAAGAA ATTTCTCTTA AGATCTTATG TAGATATGCT TTTCGACAAA GCTTTCCACA TCATGGATTT AAAGAGCTTG CATTAAGACT AACAAAGCTT TGTGGTAATC TTCCATTGGG TCTACGTGTG GTGGGTTCTT CTTTACGTGG GAAGAAGGAA GAGGAATGGG AAGAAGTAAT GTGCAGGCTA GAAACTATTC TTGATCATCG AGATATTGAA GAAGTACTAA GAGTTGGATA TGAGAGTTTA CATGAGAATG AGAAATCTCT ATTTCTTCAC ATTGCGGTCT TTTTTAACCA TAAAGATGGT GATATTGTTA ATGCAATGCT CGCTGAAACT AACTTGGATA TCAAACATGG GTTGAGAATC CTAGTAAATA AATCTCTCAT ATATATATCT ACTAAAAGGG AAATAGTGAT GCACAAGTTA CTACAACAAG TGGGTAGACA GGTCATTCAT AGACAAGAGC CTTGGAAACG CCAAATCTTA ATTGATGCAC ATGAGATATG TGATGTCCTT GAAAATGATA CAGGTAATAG AGCTGTGTCC GGCATATCAT TTGATACATC AGGAATCGCT GAAGTTATCA TAAGTGATAG AGCTCTTAGA AGAATGAGTA ATCTTCGATT TCTTAGTGTT TACAAAACAA GATACAATGG GAATGATAGA GTGCACATAC CTGAGGAGAT AGAGTTTCCA CCTCGTTTGA GGTTACTGCA TTGGGTGGCA TACCCGAAAA AGAGTCTTCC ACTTAGATTC TGCTTGGAAA ATCTTGTTGA GCTTTACATG CGGGATAGCC AGCTCGAGAA GCTTTGGGAA GGAGCTCAGC CGCTAACAAA TCTCAAGAAG ATGGATTTTT CATCGTCTCG AAAGTTAAAA GAACTCCCAG ATCTTTCAAA TGCTACAAAT TTGAAGAGAT TGCAACTAAA TGGTTGCACA AGTTTGGTCG AAATTCCGTC AACTATTGCA AATCTTCATA AACTAGAAGA CTTGGTGATG AATTCTTGCG TAAATCTAGA AGTTGTTCCA ACTCACATCA ACTTAGCATC TCTTGAGAGG ATCTACATGA TTGGATGCTC ACGACTAAGA ACGTTTCCAG ATATGTCTAC AAACATTAGC CAACTTCTTA TGTCAGAAAC AGCGGTAGAA AAAGTGCCTG CATCGATTAG GCTATGGTCT CGTCTTTCCT ATGTTGATAT AAGAGGCAGT GGAAATCTGA AGACCTTAAC ACATTTCCCT GAAAGCCTAT GGTCTCTGGA CCTAAGCTAT ACTGATATTG AGAAGATTCC ATATTGCATC AAACGTATCC ATCACCTACA AAGCCTTGAA GTAACGGGGT GCAGAAAACT CGCATCTTTG CCTGAGCTTC CTTCTTCGCT CAGACTTTTA ATGGCAGAAG ATTGTAAATC ATTGGAGAAC GTAACTTCCC CTCTAAGAAC TCCAAATGCG AAACTCAATT TCACCAACTG TTTTAAACTT GGTGGAGAAT CAAGAAGAGT AATTATCCAA AGTTTGTTTC TCTACGAGTT TGTTTGCTTA CCAGGAAGAG AAATGCCTCC AGAGTTCAAT CACCAAGCCA GAGGTAATTC TTTAACCATT ATAAATGAGA AAGATTGCTC GTTTTCTGGA TCTTCCAAGT TCAAGGTTTG TGTCATGATT TCGCCTAACC ATCACCATCA TACAAAAGAA AACAGAGAAC TTCGTTTGAA GTATGGAATC ATAGGCAAGA GCGGATATAG ATATCCTATT TTCATAGTAC ACCCTCGTGA ATCTCCTGGA ATTAGAACAG ATCATCTTTG TATATTTCAT TGTGACTTTC CCGGAGAAGA GATATTACTT GACGTGGGCA GCAAGATATT GTTTGAATTC AGCAGCCGGT ACTGCGAGAT TATAGAATGT GGTGTAAGAA TCCTAACCAA GGATGAGGAG GGAAGCAACA ACAATAGAAG CAATAAATAT AGACTAGACC AAGTTTCTGA AGACAAAGAT AACTGGAGCT ACGAGTTTGA ACCTGGCGAG TCGATATTAG ACAAGGTATC TGATGAAGAA GAAGACAATG TCGAAGGAAA GGAGCATACA AACTGTTGGA GTTGGCTATT CGCATGCTTT AATCTCTTCC ATATTGGATG TTTGGGTTGG GGAACAAAAC GATAG 
Length3195
Protein Sequence
Protein Residue
Map Locationscaffold_1: 29952283.. 29960762
Download Sequence
A.thaliana
AGI-codeAT2G16870.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
12.0416 Ahg915669 Glutathione S-transferase family protein
18.9737 Ahg483400 NAC domain containing protein 42
25.1396 Ahg887308
27.037 Ahg894358 beta glucosidase 31
27.2397 Ahg898036 Eukaryotic aspartyl protease family protein
27.9285 Ahg922121 Major facilitator superfamily protein
30 Ahg918583 Auxin efflux carrier family protein
33.3167 Ahg477665 NAC domain containing protein 46
34.8568 Ahg488124 WRKY DNA-binding protein 75
35.1568 Ahg323063 H(+)-ATPase 8
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression