Detail



ID : Ahg915416

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915416|Al_scaffold_0008_167
Sequence
ATGTCTCGCA TTTGGCAATA TGATGTCTTC ATTAGCTTCA GAGGGGACGA TCTCCGCCAT AACTTCCTCG CCCACTTTCG AAAGGAGCTC GATCGTAAAT TGATCAGAAC TTTCAATGAC ATGGAGATCG AGAAAGGTGA ATCGCTCGAT CCCGTGCTTA CACAGGCCAT TAGGGGTTCG AAGATCGCGG TGGTTTTATT CTCTAAAAAC TACGCCTCTT CAAGCTGGTG TCTAAATGAG CTGCTGGAGA TTGTGAAATG CAAGAAAGAA ATTGGCCAAC TTGTGATTCC CATTTTCCAC GGTGTGGATC CTTCCCATGT GAGGCATCAA ATCGGTGACT TTGGAAGTAT CTTTGAAAAG ACTTGCAGGA GACATTCAGA GGAAGTGAAA AATCAGTGGA AGAAAGCGTT GACCGAAGTA GCAAATATGG TCGGAACACA TCTTCAAAAT TGGGATAATG AAGCAAAGCA GATTGAATAT ATCGTCAATG ATCTTTTGGG TACAGTGATT CTAACTCCAT CAAAGGATTT TGAGGATACT GTTGGGATTG AAGATCATAT AGCAAAGATA AGTTTAATTT TGGACTTGAA ATTTGAATCT AAGGAAGTGA GAAGGGTTGG GATATGGGGT CCCTCAGGAA TTGGCAAAAC AACCATTGCA AGAGCTTTAT ATAGTCAACA TTCTCATGTT TTCGATGTTT GTGTTTTCTT AGACATACAT TTCGTATCTA AGAGTACTAA AAATTATAGA AAAGGCAATC CAGATGACTA TAACATGAAG TTGCGTTTGC AAAAAAGTTT CCTTTCTAAA ATATTAGACC AAAAGGACAT AGAGGTAGAA CATTTAGGTG TAATAGAAGA GAGGCTAAAG CACCAGAAAG TTCTTATCGT TCTTGATGAT TTGGATGATC AAATGGTGTT AGATACCTTG GTAGGTAAAG ATGAATGGTT TGGATGTGGG AGCAGAATCA TTGTGATTAC AAAAGATAAG CGTCTTCTAG AAGCCCATGG GATAAATCAT ATATATGAGG TTGGTTTCCC ATCTGAAAAG CAAGCTCTTG AGATGTTCTG TCACTCAGCT TTTGGGCAGA AATCTCCGGA TGATGGTTTT GTGGAGCTCG CTACGGAAGT TGCAGCACGT GCTGGTGGTC TTCCTTTAGG TCTTAAGATT CTAGGTAAAG TTATGAAAAA TCGGAAGGTA GAGGAATGGA AGGGTGAATT GCTGAGTCTT CAAAAAAATC AGAATGGGGA TATTGGAAAA ACACTTAAAG TCAGCTACGA TAAGATAGAT ATCCAAAAAC ATAGAGCGAT ATTTCGTCAC ATCGCTTGTT TTTTCAATGG GGCGGAAATC GATAACATCA AATTGATGCT CCCAGAGTTG GATGTTGAAA CAGGTGTTAG ACACCTAGTT GAGAAGTCCC TCATAAGTAG CAAATCATCG TGGAACAATA CGTGTACCGT AGATATGCAC TGTTTGGTAC AAGAAATGGG AAAGCAACTT GTCCGTGCAC AGTCCGAAGA GCCTGGAGAA CGAGAATTCC TATTTGATTC AGATGATGTC TGCAATGTAC TTGGAGGTAC CAATGGTACT AATAAAGTTA TAGGTATATC ATTGGATTTA AATGAGATTG ATGAGTTGGA GATACACAAG AAAGCGTTCA AAAATATGCA CAATCTCCGT TTTCTAAGGT TCCATATAAA TTCATGGGAG CGGGAAAAGG AAGTTGAATG GAATTTACCC AAAAAAATTG ATGCTTTTCC TCCTAAACTC AAGTTACTAA ATTGGCCGGG ATATCCGATG AAACAATTGC CTGCTGAATT TCGTCCTGAT AAGCTGGTTG AACTCAGGAT GCCCAATAGC AAGATACTTG AGAAACTATG GGAAGGAGAT AAGTCACTTA AATTCCTCAA GGATATGGAT TTGTCGGGAT CGCTAAACCT GAAAGAAATC CCAGATCTTT CAAAGGCGAC CAATCTTGAG ACGCTGAATC TTAACGGTTG TTCAAGCTTG GTGGAGCTTC CTTCCTCTAT TCTGAATCTC AATAAACTGA CGGATTTGAA CATGGCTGGA TGCACAAATC TGGAGGCTCT TCCAACTGGC AAACTGGAAT CTCTTATCCA CCTCAATCTT GCTGGATGCT CACGGTTGAA GATTTTCCCT GATATCTCTA ACAAAATCTC AGAGCTTATT ATAAACAAGA CTGCCTTCGA AATATTCCCT TCTCAACTGC GTCTAGAGAA TCTAGTTGAA CTTAGCCTGG AGCATACAAT GAGTGAGAGG TTGTGGGAAG GAGTTCAGCC TCTTACAAAT CTGAAAACAA TAAAGTTGTT GGGATCTGAA AACCTGAAAG AACTCCCCAA TCTTTCAATG GCAACAAGTC TTGAGACACT TAACCTCAAT AATTGCTCGA GTTTGGTGGA GCTAACTCTT TCCACTATTC AGAATCTTAA TAAACTAACG TCCTTGGATA TGATAGGATG CTCAAGTCTA GAGACTCTTC CAATAGGCAT CAACCTGAAA TCTCTGTATC GCCTCAATCT CAATGGATGC TCGCAGTTGA GAGGTTTCCC AGATATCTCA AACAACATCA CGTTTCTCTT TTTAAACCAG ACAGCGATCG AAGAAGTCCC TTCGCATATC AATAACTTCT CTAGCCTTGA AGCCCTGGAA ATGATGGGAT GCAAAGAGCT AAAATGGATC TCACCAGGAC TTTTCGAACT CAAGGATCTT GACGAGGTTT TCTTCTCAGA TTGCAAGAAA TTGGGTGAAG TAAAATGGTC TGAGAAAGCA GAAGACACCA AGTTGTCAGT GATCAGTTTC ACCAATTGCT TCTACATAAA TCAAGAAATC TTTATTCACC AATCAGCTTC CAACTATATG ATCTTACCAG GTGAAGTGCC TCCATATTTT ACTCACCGAT CTACGGGAAA CTCCCTTACC ATCCCTCTAC ATCATTCTTC TCTCTCTCAA CAACCATTCT TGGACTTCAA GGCTTGCGTC GTGGTTTCTG ATCTTGTCGT GGGATCTGAA GCCGTCGTCA AGAAGCTTTG CTTTATGGAC ATTGAGGTAC ATTGTCATTT TATAGACAAG CACGGGAACT ACTTTGAGCC TGCTGAACGA AAAGATCTAT CCGTCCATCA GAAATATAAT CATCAAATAA TTTTTGATTG TCGTTTCCCT CTAAACCTAG ACTGCGATCA AGTTCAGATA AAATTTCTTC TCCCTAATGA GAGACTCAAA CTTAAAAGAT GCGGTGTGCG ACTTTCAGAT GACTCTACTC CATTCTCGGC TATTCAGAAT CAAGGCTATG AGACTGCACT TGATGAAGAC GAGTGCACTT GA 
Length3342
Protein Sequence
Protein Residue
Map Locationscaffold_8: 847011.. 852969
Download Sequence
A.thaliana
AGI-codeAT5G46450.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.6352 Ahg475803 RING/U-box superfamily protein
21.8174 Ahg887750 F-box/RNI-like superfamily protein
22.2711 Ahg932731
30.692 Ahg914585
42.2611 Ahg891934
51.3809 Ahg486904 NAD(P)-linked oxidoreductase superfamily protein
52.4976 Ahg922690 EXS (ERD1/XPR1/SYG1) family protein
57.6715 Ahg490111
58.6515 Ahg478378 Plant self-incompatibility protein S1 family
64.923 Ahg948288 ankyrin repeat family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression