Detail



ID : Ahg915423

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915423|Al_scaffold_0008_174
Sequence
ATGGCTTCTT CTTCCTCCTC TTCCCGCAAT TGGGTATACG ATGTTTTCCC AAGTTTCAGT GGAGAAGATG TCCGCAAAAC ATTCCTCAGC CACTTTCTTA AAGAACTTGA CCGAAAACTG ATTATTGCTT TCAAAGACAA CGAGATTGAG AGAAGCCAGT CGCTTGATCC CGAGCTTAAA CAAGCGATCA GGTCTTCAAG GATCGCGGTG GTTGTGTTTT CGGAAAAGTA CCCATCTTCC AGCTGGTGCC TGGACGAGTT GCTGGAGATC GTGAGATGCA AGGAAGAATT AGGTCAACTG GTTATACCAG TTTTCTACGG TTTAGATCCA TCTCATGTCA GGAAACAAAC CGGACAATTT GGAGAGGCTT TTGCGAAGAC TTGTCAAAGA AAAACAGAGG ATGAAACAAA ACTTTGGCGG CAATCCTTGA CAGATGTAGC AAATGTCCTA GGATATCATT CTCAAAACTG GCCTAGCGAA GCAAAAATGA TTGAAGCAAT TGCCAATAAT GTCTTGGGTA AACTGAATTT CACTCCATCG AAGGATTTTG AGGATTTTGT CGGAATGGAA GATCATATTG CAAAGATGAG TGTATTATTG AATTTGGAAT CTGAGGAAGT GAGGATGGTT GGGATATGGG GCTCCTCAGG AATTGGCAAG ACTTCCATTG CAAGAGCTTT ATATAATCAA CTCTCTCGTC GGTTCCAAGG TAGTGTTTTC ATAGATAGAG CATTTGTAAC TAAGAGTAAG AGTAATTATG AAAGTGCCAA CCCTGACGAT TATAACATGA AGTTGTATTT GCTAAGAAGT TTTTTGTCTG AAATTTTGGA CAAAAAAAAC GTAAGGATAA ATCACTTAGG TGCAGCGGAA GAGACGTTAA ATCGCCGGAA AGTTCTTATC TTTATTGATG ATATGGATGA TCAAGTGGTG CTAGATACTT TGGCTGGTCA AGCTCATTGG TTTGGTTGTG GGAGCAGAAT CATTGTGATT ACAAAAGATA AACATTTTTT AAGGGCCCAT AGGATTGATC ATATTTATGA GGTCTGTCTT CCATCTAAAG ACCTTGCGCT TAAGATATTT TGTAGATCTG CTTTCAAGAA AAACTCTCCA CCTGAAGGTT TGATGGATCT TGCTTCTGAA GTTGCATGGC GTGCCGGTAA TCTTCCTTTG GGTCTTAAGG TTTTGGGCTC GTATTTACGG GGTAGGGACA AAGAGGATCT GATGGATATG TTGCCGAGGC TTCGAAATAG TTTGGATGGA AAAATTGAGA AGACGCTAAG AGTTAGTTAC GATGGATTAA ATGACAAAAA GGATAAAGCG ATATTTCGTC ACATTGCATG TCTTTTCAAT GGTGAAAAAG CCAATGACAT CAAGTTGCTA CTAGCAGACA GCGGCTTGGA TGTTAATATC GGGTTAAAAA ACCTTGTTGA TAAGTCTCTC ATACATGTAA GAAAGGAAAT TGTTGAGATG CACTCTTTGC TCCAAGAAAT GGGTAAGGAG ATCGTCCGTG CACAATCCAA TGAGCCTGGA GAACGAGAGT TACTTGTGGA TGCAAAAGAA ATTTGTGATT TACTTGAAGA TAACACTGGT ACCAAAAAGG TTTTAGGTAT AGCGTTGGAT ATGGATGAGA TAGATGAATT GCATATACAT GAGAATGCCT TCAAAGGGAT GCGTAATCTC ATGTTTCTAA ATTTTTACAC TAAGAAATGG GACCAGAAGA ATGAGGTGAG ATGGCACTTA CCGGAAGGAT TCAACTATTT GCCCCATAAA CTTAGGTTAT TGAGATTGGA CGGATATCCA ATGAGGCATA TGCCTTCTAA CTTTCGTACC GAAAATCTTG TTGAGCTGCA TATGCCAGGG AGCAAACTTG AGAGGCTATG GGAAGGAGTT CAAGAACTTA AAGGGCTCAA GACGATAAAT TTGCACAGAT CTAAAAATTT GAAAGAAATA CCAAATCTTT CGATGGCCAC CAATCTTGAG GAACTTCATC TTGGTGATTG CTCAAGTTTG GTGGAACTTT CTTCCTCTGT TCAGTATCTC AATAAGCTGA AGAGTTTGGT TATGTCAGGA TGCAAAAATC TGGAGATTCT TCCCACCGGA ATCAACCTCC AATCTCTTTT TAGCCTTAAT CTGAAAGGAT GCTCAGGGTT AAAGATTTTT CCCAATATCT CAACCAACAT CTCATGGCTA ATTCTAGATG AAACATCAAT TGAAGAATTT CCTTCTAACT TGCGTTTAGA TAATCTTTTA CTTCTTAGCA TGTGTAGAAT GAAGAGTCAG AAACTCTGGG ATAGAAAGCA GCCGCTTACG CCTCTCATGG CCATGCTGCC TCATTCTCTG GAGGAATTGT TTCTCTCGGA CATTCCAAGT TTGGTGGATA TTCCTTCCTC TATCCAGAAT TTCACTCACC TTGATTGTTT GGGAATTGAA GATTGCATAA ACCTGGAGAC TCTTCCCACC GGCATCAACT TTCATCATCT TGAAAGCCTT AATCTCAGTG GATGCTCTCG GTTGAAGACT TTTCCAAATA TCTCAACCAA CATTGAACAA CTCTATCTAC AACGAACAGG GATAGAAGAA GTTCCTTGGT GGATAGAGAA ATTCACAAAG CTGGAATACA TAACTATGGA GAAATGCAAC AATTTAATAC GTGTATCCCT AAACATTTAC AAACTGAAAC GTCTTATGGT TGACTTTTCA GACTGCGGGT CATTGACTGA AGCTAGTTGG AATGGTAGTC CAAGTGAGGT GGCAATGGTA ACAGACAATA TTCACTCTAA GTTTCCAGTC CTTGACGAGG CTTTCTATTC TGATCCAGAT AGTACTCCCC CAGAATTTTG GTTCAATTTC CACTTCCTCA ACTTGGATCC AGAAGCTCTC CTTCGCCAAC GATTTATCTT TAACTCCATA ACCTTGTCAG GTGAAGAAGT GCCTTCATAT TTCACTCACC GAACTACTGA AATCTCTTTA ACCAGTATCC CTCTACTTCA ACCCTCTCTT TCTCAACAAT TCTTCAAATT TAAGGCTTGC GCAGTGGTTA GTTTCGACTC TTTGTTCCTA ACTTGGGGCT TTGGAGTATA TATCCGTGTA AACTGTCGGT TCAAAGACAG ACATGGGAAC AGCTTTGATA CCTTTGGTCA GCCACATGGC TTCAGCGGAT CTAAGAAGGA TAATAATCTG TTTATATTGG ACTGTCGTGT CCCGCTAAAC AAAGATAACG CTGCTCTTGC TCAACTGAAC TATGATCACG TGGATATGGA AATTCAAATT AGAAAGTTGG ATCAATCATA CAAGTATGGC TATACCTTCA AATTAAAAGG ATGGGGTGTA CGAGTGTTAG AGGAATGTTC ACTACTGGAG AACCGACTTC CACATGTTTA TGAAGCAGAT GAAGACAATT TGGTTAATAT GACTGAGCAC AGTGAAGAGT ATGTTGAGAC AGTTGTGAAG AGACAAAGAG AAACTGGAAG CGACTGCAGA TTACCTGAAG GACCACTCAA GAAACCCCTG CTTTGCCCTG CCTCCGATAC CCAGGAGGAA AACAAGACGT CACTTTGA 
Length3558
Protein Sequence
Protein Residue
Map Locationscaffold_8: 940447.. 944522
Download Sequence
A.thaliana
AGI-codeAT5G46450.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
39.3446 Ahg477399 SPFH/Band 7/PHB domain-containing membrane-associated protein family
63.5925 Ahg926547 sucrose-proton symporter 1
82.9819 Ahg489442 Protein kinase family protein with leucine-rich repeat domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression