Detail



ID : Ahg917615

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917615|Al_scaffold_0008_2366
Sequence
ATGGCGAAAT TAGGAGAAGC TTCATTTTGT GTCCTTGTTT TGTTCTTGAG TTTAGTGTCG GCAGACACAG ATAATCGTCA AGATAACCAA GTGTATGTTG TCTACATGGG TTCACTTCCG TCTCAACCGG ACTACAAACC AACGTCGGAT CACATAAATA TTCTTCAAGA AGTCACCGGC GAAAGTTCGA TCGAAGGACG TTTGGTTAGA AGTTACAAGA GGAGTTTCAA CGGGTTCGCT GCCCGGCTCA CTGAGTCAGA ACGACAAAGA GTAGCCGAAA TGGAGGGAGT TGTGTCCGTG TTCCCAAGCA TGAACTACAA ACTCCATACA ACGGCATCTT GGGACTTCAT GGGAATGAAG GAAGGAACAA ATACAAAACG AAACTTGGCC GTTGAGAGTG ATACTATTGT AGGAGTTTTG GACACTGGGA TTTCGCCAGA ATCAGAAAGC TTTTCCGGTA AAGGCTTTGG TCCTCCTCCT AAGAAATGGA AAGGTGTTTG CTCCGGCGGC AAAAACTTCA CTTGCAACAA CAAGTTGATT GGAGCAAGAG ACTATACAAA CGAAGGCACG AGGGACACTG AAGGCCACGG TACACACACA GCATCAACAG CGGCTGGAAA CGCGGTTGAG AACGCAAGTT TCTATGGAAT CGGTAATGGA ACTGCAAGAG GCGGCGTTCC AGCATCCAGA ATAGCAGCAT ACAAAGTCTG TAGCGGGTCA GGGTGTAGCA CGGAATCTAT ACTATCGGCT TTCGATGATG CTATCGCAGA TGGTGTCGAC GTCATCAGCG CCTCCCTCGG GGGAGTCACC ACCTACATGT ACGAAAAGGA CCCAATAGCG ATAGGGGCTT TTCACGCTAT GGCCAAAGGG ATTCTCACTG TGCAGTCAGC TGGTAACAGC GGTCCAAATC CAACCGTGAG CGTAGCACCG TGGATCTTAA CCGTTGCAGC TAGCACCACA AACCGTGGGG TTTTCACTAA AGTCGTTCTC GGAAACGGCA AGACACTTGT CGGAAAATCA GTGAATGCTT TTGATCTGAA AGGAAAACAG TATCCTCTTG TGTACGAACA ATCGGTTGAG AAGTGTAATA ACGAATCTCA GGCGAAGGGA AAGATCGTTA GGACTTTGGC TCTCTCATTT CTTACATTAA CTCCACAAAG TAAGGAACAA GTCATCTCGA TGTTTCATAC TCTTACCATG TCCCCGAAAG CGGCTGTGCT AAAAAGTGAA GCAATATTTA ATCAGGCAGC TCCTAAAGTT GCTGGATTCT CTTCTCGCGG TCCAAACACT ATCGCTGTTG ATATTCTTAA GCCGGATATA ACAGCACCAG GAGTGGAAAT CCTTGCTGCC TATTCACCTT TGGTTTCACC ATCTGCAACA ACGCTGGACA ATAGGCGTGT GAACTACACT ATTACCTCAG GAACTTCGAT GGCCTGTCCA CACGTTTCAG GCGTGGCTGC GTACCTCAAG ACATTTCATC CTGAATGGTC TCCTTCCATG ATCCAATCTG CCATCATGAC AACCGCTTGG CCGATGAATG CGTCTGGAAC TGGCGCAGTC TCTACCGAGT TTGCTTATGG AGCTGGACAT GTCGACCCAA TAGCAGCTTT AAATCCAGGA CTCGTCTATG AATTAGGCAA ATCAGACCAC ATCGCCTTTC TCTGTGGCAT GAATTACAAT GCTACTACCT TAAAACTCAT CGCCGGTGAA GCTGTCACTT GTACTGACAA GACCTTACCA AGAAACCTAA ACTATCCTTC AATGTCAGCT AAATTGTCGA AATCTAACAG CTCCTTCACA GTGACTTTCA ACAGAACCGT CACCAACATA GGTACCTCCA ACTCAACATA CAAATCAAAA GTTGCCATAA ATAACGGATC TAAGCTCAAC GTCAAGGTCT CGCCTAGTGT TCTATCCATG AAGTCAGTGA ACGAGAAGCA GTCTTTCACG GTGACTGTTT CAGGCAGCGA TCTCAACCCA AAACTGCCTT CATCTGCAAA TCTAATCTGG TCTGATGGAA CACATAACGT GAGAAGTCCC ATTGTTGTTT ATACTGATGG TTACTAA 
Length2067
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17613475.. 17616423
Download Sequence
A.thaliana
AGI-codeAT5G58840.1
DescriptionSubtilase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.09902 Ahg894848
7.74597 Ahg926669 PYR1-like 3
7.74597 Ahg484308 basic leucine-zipper 48
8.48528 Ahg927734 ROTUNDIFOLIA like 19
18.3303 Ahg330283 TPX2 (targeting protein for Xklp2) protein family
24.7386 Ahg943182 Cysteine/Histidine-rich C1 domain family protein
25.7488 Ahg949194
27.7128 Ahg348453
29.3939 Ahg352971
33.1662 Ahg942873
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression