Detail



ID : Ahg917617

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917617|Al_scaffold_0008_2368
Sequence
ATGGCGAAAC GAGCAGATTC CTTTTGTTTC ATATCATGTG TTCTTGTCTC GTTTTTGATT TTAGGCTCTG CAGTGACAGA TGATTCTCAA GATAAAAAAG TGTATGTTGT CTACATGGGC TCACTTCCGT CTCGACTGGA ATACACACCA ATGTCGCATC ATATGAGTAT TCTTCAAGAA GTCACCGGAG AAAGTTCGAT CGAAGGACGT TTGGTGAGAA GTTACAAGAG GAGTTTCAAC GGGTTCGCGG CTCGACTCAC CGAGTCAGAA CGAGAAAGAG TAGCCGATAT GAAGNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN CTCCAAACGA CGGCGTCTTG GGACTTCATG GGGCTAAAGG GAGGAAAGAA TACAAAGCGT AACTTAGCAA TAGAGAGTGA TATGATTGTT GGAGTCATCG ACAGTGGGAT TTGGCCAGAA TCCGAGAGCT TCTCTGATAA AGGCTTTGGT CCTCCTCCTA AGAAATGGAA AGGTGTTTGC TCCGGCGGCG AAAACTTCAC ATGCAACAAC AAGTTGATTG GAGCAAGAGA CTACACAAGC GAAGGCACTA GGGATAGCAT AGGCCACGGT TCACACACAG CATCCACAGC GGCTGGAAAT GCAGTTGAGA ACACAAGTTA CTATGGAATC GGTAATGGAA CTGCGAGAGG CGGCGTTCCA GCCTCAAGAA TCGCAGCTTA CAAAGCATGT GGCGAGACAG GGTGTAGCGA TGAATCTATA CTATCGGCGT TCGATGATGC GATAGCAGAC GGTGTTGACC TCATCAGCAT CTCTATCGGG GAACGCTTTG TCCACAAATA CGAAAAGGAC CCAATGGCGA TTGGGGCTTT TCACGCTATG GTCAAAGGGA TTCTTACTGT GAACTCAGCC GGTAACGATG GTCCGGATCC GGGCTCAGTC ATAAGTGTAG CACCGTGGAT CTTGACAGTT GCAGCGAGCA CCACCAACCG TGGGTTTGTC ACCAAAGTTG TACTCGGAAA CGGGAAGACA CTTGTCGGGA AATCATTGAA CGCTTTTGAT TTGAAAGGAA AGAATTATCC TCTTGTGTAT GGAACTCTTC TTAAAGAACC TCTGCTTAGG GGAAAAATCT TGGTGAGTAA ATATCAACTT AGTTCAAACA TAGCTGTTGG AACCATAAAT CTTGGTGACC AAGACTATGC CTCCGTTAGC CCTCAGCCCT CCTCTGCCCT GTCACAAGAT GACTTTGACT CTGTCGTCTC TTACGTTAAC TCCACAAAGT CCCCGCAAGC AACTGTTCTA AAAAGTAAAG CAATCTTTAA TCAGAAAGCT CCTAAAGTTG CTTCCTTCTC TTCTCGCGGT CCAAATACTA TTGCGGTTGA TATTCTAAAG CCAGATGTAA CAGCACCAGG AGTGGAGATT CTCGCTGCGT ATTCACCTTT GAATTCACCA TCTGAGGTAT GGTTTGATAA AAGACATGTG AAGTACTCTG TTCTGTCCGG AACTTCGATG GCTTGTCCAC ACGTTGCAGG CGTGGCTGCG TACATCAAGA CTTTTCATCC TGAATGGTCT CCTTCCATGA TCCAATCTGC CATCATGACA ACTGCTTGGC GGATGAATGC TACCGGAACC GGGGTTGCAT CAACCGAGTT TTCTTATGGA GCAGGACATG TTGACCCAAT AGCCGCTCTT AATCCCGGAC TCGTCTATGA ATTAGACAAA GCAGACCACA TCGCCTTTCT TTGCGGTTTG AACTACTCTT CAAAAACTCT TCAGCTCATC GCCGGTGAAG CCATCACTTG CACTGGAAAG AGCTTACCAA GAAACCTCAA CTATCCTTCA ATGTCGGCTA AACTTTCGGA ATCTAATAGC TCCTTCACTG TGACATTCAA CAGAACCGTG ACCAACCTCG GTACCCCAAA CTCAACATAC AAATCAAAGA TTGTCATAAA TCACGGATCT AAACTCAAAG TCAAGGTCTC CCCAAGTGTT CTATCTATGA AGTCCGTGAA GGAGAAGCAG TCTTTCACAG TGACTGTTTC AGGCAGCAAT CTCAACACAA ATCTGCCTTC ATCTGCAAAT CTAATATGGT CTGATGGAAA ACATAACGTG AGAAGCCCCA TTGTTGTTTA TACTTATAGT GGTTAA 
Length2136
Protein Sequence
Protein Residue
Map Locationscaffold_285: 2925.. 5802
Download Sequence
A.thaliana
AGI-codeAT5G58840.1
DescriptionSubtilase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Virus3928
2.44949 Ahg355462
3.87298 Ahg923128 pectin methylesterase inhibitor 1
4.47214 Ahg924439 Protein of unknown function (DUF784)
4.47214 Ahg924433 Protein of unknown function (DUF784)
7 Ahg900097
7.48331 Virus0716
9.16515 Ahg471434 nucleotide binding
10.9545 Ahg887756 Protein of Unknown Function (DUF239)
12.2474 Ahg888092
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression