Detail



ID : Ahg925527

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925527|scaffold_201088.1
Sequence
GCCCTCTTTT TTTTTTCCAG ATGCAAATTT TCGTGAAAAC ACTCACTGGC AAGACCATTA CTCTCGAGGT TGAGAGCTCT GACACCATTG ACAATGTTAA GGCAAAGATT CAGGATAAGG AAGGTATTCC TCCTGACCAG CAGAGATTGA TCTTCGCTGG TAAACAGTTA GAAGATGGTC GTACCTTGGC AGATTACAAT ATCCAGAAGG AATCAACACT CCATTTGGTT CTCAGGTTAA GAGGTGGTAT GCAGATTTTT GTGAAGACGT TGACTGGCAA AACCATTACT TTGGAGGTTG AAAGTTCAGA TACTATTGAT AATGTTAAAG CTAAGATTCA GGATAAGGAA GGAATCCCTC CGGATCAGCA GAGGCTTATC TTTGCTGGTA AGCAGCTTGA GGACGGTCGC ACACTCGCTG ATTACAATAT CCAGAAAGAG TCTACACTTC ATTTGGTGCT TCGTCTTAGA GGTGGTATGC AGATTTTTGT GAAGACCCTC ACTGGAAAGA CCATTACTTT GGAGGTTGAG AGCTCAGACA CTATTGATAA TGTCAAGGCA AAGATTCAAG ACAAGGAAGG TATCCCTCCG GATCAACAGA GACTCATCTT TGCCGGTAAG CAGCTTGAGG ATGGTCGTAC TTTAGCTGAT TACAACATCC AAAAAGAGTC TACCCTCCAT TTGGTGCTTC GTCTCAGAGG TGGTATGCAG ATCTTTGTGA AGACTCTCAC TGGAAAGACT ATCACTTTGG AGGTTGAGAG CTCAGACACA ATCGATAACG TCAAGGCTAA GATTCAGGAC AAGGAGGGGA TCCCACCAGA CCAACAGAGG CTTATCTTTG CCGGTAAGCA GCTTGAAGAT GGACGCACCC TTGCTGATTA CAACATCCAA AAGGAGTCTA CCCTCCATCT TGTGCTTCGT CTCCGTGGTG GTATGCAGAT CTTTGTAAAG ACCCTTACCG GGAAAACCAT AACTTTGGAG GTTGAAAGTT CCGATACTAT CGATAATGTT AAGGCTAAGA TCCAGGACAA GGAGGGGATC CCACCAGACC AACAGAGACT CATCTTCGCT GGGAAACAGC TTGAGGATGG TCGGACTTTG GCTGATTACA ACATCCAGAA GGAATCTACC CTTCACCTTG TGTTGCGTCT TCGTGGTGGT ATGCAAATAT TTGTGAAAAC TTTGACAGGC AAGACCATTA CGTTGGAGGT TGAGAGCTCA GACACAATCG ATAACGTCAA GGCTAAGATT CAGGACAAGG AGGGGATCCC ACCAGACCAA CAGAGACTCA TCTTCGCTGG TAAACAGCTC GAGGATGGTC GGACTTTAGC TGATTACAAC ATCCAGAAGG AGTCGACTCT TCACTTGGTT CTTCGTCTTC GTGGTGGAAG CTTCTGAGCT TTGTGATCTG TGGTCAA 
Length1417
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8539583.. 8540999
Download Sequence
A.thaliana
AGI-codeAT5G20620.1
Descriptionubiquitin 4
TAIR curator summaryencodes a ubiquitin polyprotein.
Alias[UBQ4][ubiquitin 4]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg925577 ubiquitin 4
5.2915 Ahg482268 ubiquitin 4
17.6635 Ahg317764 P-loop containing nucleoside triphosphate hydrolases superfamily protein
21.6333 Ahg486615 SKP1-like 21
31.1769 Ahg485317 ubiquitin-specific protease 26
32.0156 Ahg474686 nuclear factor Y, subunit C2
35.5809 Ahg478172 ubiquitin-conjugating enzyme 11
43.0813 Ahg488966 ubiquitin 4
47.8121 Ahg952554 lipid-binding serum glycoprotein family protein
49.7494 Ahg482625 Aldolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression