Detail



ID : Ahg932119

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932119|scaffold_400107.1
Sequence
TCTGATCGGA CTTGTGAATC ATGAACACTG GAGGTCGACT TATTGCTGGG TCTCACAATA GAAACGAATT CGTTCTCATT AACGCCGACG AGACTGCCAG AATACGATCA GTGCAAGAAC TGAGTGGACA AACTTGTAAA ATCTGTAGAG ATGAGATTGA GTTAACAGAG AATGGTGAGC CATTTATCGC TTGCAACGAA TGCGCATTCC CTGTGTGTAG ACCGTGCTAT GAGTATGAAA GAAAAGAAGG AAATCAAGCT TGTCCTCAAT GCAGAACCCG ATACAAGCGT ATTAAAGGTA GTCCAAGGGT TGAAGGGGAT GAAGAAGATG ATGACATTGA TGATCTGGAG TATGAGTTTT ATGGAATGGA TCCCGAACAT GTTGCTGAAG CCGCACTCTC TATGCGTCTT AACACTGGTC GTGGTACTAA CGAAGTGTCA CACTTGTATC CAGCTCCAGA GGAGTCTCAG GTTCCTCTTT TGACGTATTG TGATGAGGAT GCTGATATGT ATTCGGATAG ACATGCTCTT ATCGTGCCCC CATCTATGGA TTTGGGGAAC AGAGTCCATC ATGTGCCATT TACAGATTCT TTTGCATCTA TACAAACAAG ACCCATGGTT CCTCAGAAGG ATCTTGCAGT TTATGGATAT GGAAGTGTTG CATGGAAAGA CCGTATGGAA GTATGGAAGA ATAGACAAGT AGAAAAGCTT CAAGTCTTTA AGAATGTAGG AGGAATTGAT GGCAATGGCG ATGGTGATGG CTTCATTGTT GACGAGCTCG ATAATCCCGA GCTACCTATG ATGGATGAAG GAAGACAGCC TCTGTCACGA AAGCTACCCA TTCGTTCGAG CAGAATAAAT CCTTATAGGA TGTTGATTTT CTGTCGGCTA GCCATTCTTG GTTTGTTCTT CCATTATAGG ATTCTCCATC CGGTGAATGA TGCATTCGGC TTGTGGTTAA CATCGGTTAT ATGCGAAATA TGGTTTGCTG TGTCTTGGAT TCTCGATCAG TTTCCGAAGT GGTATCCCAT CGAAAGAGAA ACATATCTTG ACAGGCTTTC TCTCAGGTAT GAGAAGGAAG GGAAGCAATC AGAGTTAGCA CCTGTCGATG TCTTTGTTAG TACTGTGGAT CCATTGAAAG AGCCTCCCCT GATTACAGCA AATACAGTTC TGTCTATTCT CGCTGTTGAT TATCCGGTTG AGAAAGTTGC ATGTTATGTA TCAGATGATG GTGCTGCAAT GCTTACATTT GAAGCTCTCT CTTACACAGC CGAGTTTGCA AGAAAATGGG TTCCTTTCTG TAAGAAGTTC AACATCGAGC CACGCGCTCC TGAATGGTAT TTTTCACAGA AGATGGATTA CTTGAAGCAT AAAGTCCATC CCGCTTTTGT TAGGGAACGC CGTGCCATGA AGAGAGACTA TGAGGAATTC AAAGTAAAGA TCAATGCATT GGTTTCTGTA GCACAGAAAG TTCCTGAGGA TGGTTGGGCA ATGCAAGATG GAACTCCTTG GCCTGGAAAC AATGTCCGGG ACCATCCTGG AATGATTCAG GTTTTCTTGG GACACAGTGG AGTTTGTGAT ATGGATGGAA ATGAGTTACC TCGTTTGGTG TATGTTTCTC GTGAGAAGCG ACCGGGATTT GATCACCATA AGAAGGCTGG AGCTATGAAT TCCTTGATCC GGGTCTCTGC TGTTCTCTCA AATGCTCCTT ACCTTCTTAA TGTGGACTGT GATCACTACA TCAACAACAG CAAGGCAATT AGAGAAGCTA TGTGTTTCAT GATGGACCCG CAATCCGGAA AGAAAATCTG TTATGTTCAG TTTCCTCAGA GGTTTGATGG GATTGATAGA CACGATCGAT ACTCAAACCG CAATGTGGTT TTCTTCGATA TCAACATGAA AGGTTTAGAT GGCATACAAG GACCGATATA TGTAGGGACA GGGTGTGTCT TCAGAAGACA AGCACTTTAT GGATTTGATG CACCAAAGAA GAAGAAACCA CAAGGTAGAA CCTGCAACTG TTGGCCAAAG TGGTGTTGTT TGTGTTGCGG TCTGAGAAAG AAGAAGACAG CTAAGGCCAA AGATAACAAA AGAAAGAAGC CTAGAGAGAC CTTAAAACAG ATACATGCTC TCGAGCACAT CGAGGAAGGC CTCCAAGTGT CAAATGTTGA GAATAACTCT GAGACAGCCC AACTGAAACT GGAGAAGAAA TTTGGTCAAT CACCGGTTTT TGTAGCTTCT ACTCTTCTGC TAAATGGTGG AGTGCCTAGC AATGTGAACC CAGCATCTTT ATTGAGAGAA TCCATTCAAG TTATTAGCTG TGGATACGAA GAGAAAACCG AATGGGGAAA AGAGATTGGG TGGATATATG GATCGGTGAC TGAAGATATC TTGACGGGTT TCAAGATGCA CTGCCATGGA TGGAGATCTG TGTATTGTAT GCCAAAGCGA GCGGCTTTCA AAGGATCTGC TCCGATTAAC TTGTCAGATC GTCTTCATCA AGTTCTACGT TGGGCACTTG GTTCTGTAGA GATTTTCTTG AGCAGGCATT GCCCGATTTG GTATGGTTAT GGCGGCGGGT TAAAATGGTT GGAAAGATTC TCGTACATTA ACTCTGTTGT CTATCCTTGG ACATCCCTCC CGTTGCTTGT CTACTGCTCA CTTCCAGCCA TTTGTTTACT CACCGGAAAA TTCATCGTCC CTGAGATAAG TAACTACGCG GGTATTCTCT TCATGCTAAT GTTCATGTCC ATTGCGGTAA CTGGTATACT CGAAATGCAA TGGGGCAAAG TAGGAATCGA CGATTGGTGG AGAAACGAGC AGTTTTGGGT CATTGGAGGA GTCTCTTCTC ATCTATTTGC TCTGTTTCAA GGTTTACTCA AAGTTCTTGC AGGAGTCAAC ACAAACTTCA CAGTCACATC AAAAGCAGCA GATGATGGAG AGTTCTCAGA GCTTTACATC TTCAAATGGA CATCCTTGTT GATTCCTCCG ACTACTCTAC TGATCATTAA CATCGTCGGA GTCATTGTCG GAGTTTCAGA TGCGATCAAT AACGGGTATG ACTCTTGGGG ACCGCTTTTC GGGAGATTAT TCTTTGCGCT TTGGGTGATT GTTCATTTGT ATCCATTCCT CAAAGGGTTG CTTGGGAAAC AAGATAGAGT ACCAACCATT ATATTGGTTT GGTCGATTCT TCTTGCTTCG ATCTTGACTC TCTTGTGGGT TAGAGTCAAT CCTTTTGTGT CCAAAGACGG ACCGGTCTTG GTGATTTGTG GTCTTAACTG TTTAAATTGA GGACAACTAG GTTTCTTTCT 
Length3310
Protein Sequence
Protein Residue
Map Locationscaffold_4: 454823.. 459542
Download Sequence
A.thaliana
AGI-codeAT2G21770.1
Descriptioncellulose synthase A9
TAIR curator summarycellulose synthase, related to CESA6.
Alias[CESA09][CESA9][cellulose synthase A9]
Gene coexpression
MR
MR Locus Description
6.245 Ahg338295 transposable element gene
7.14143 Ahg905702
26.533 Ahg932342
33.9853 Ahg899542
34.1174 Ahg944569
40.9145 Ahg493762
45.3321 Ahg948503
52.8772 Ahg493352 HXXXD-type acyl-transferase family protein
55.4527 Ahg896412 Protein of unknown function, DUF617
64.6452 Ahg945462
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression