Detail



ID : Ahg947371

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947371|scaffold_703600.1
Sequence
TCCGAGTCCA GAGAAATCGC AATGGAGGAT TCTTCGAATC TTCCGTCGAA AGCGAGAGAG ATTCTTGTGA ATCCAAGCTA CGAAGAAATA GCGATCATTG TGCATCAACT CTTCCTGCGT CAAGACTCTG TACAATATGA AACATCGCGT ATTTTGTACA ACTTCTGGGT CTCTCATAAC CCAAGTTGCT TAACCCTAAA GCTTCTTAAG CTCTATCAAT CTTCTTCCAA TGGCGTTCTC AGATTCCGAT CAATCTATCA ACTCTCCGAA ACCCTCACCG AGTTCAAGTT CAAACCCTCT CTCGACTCTC TTTATGAAAT CAAACCTCTT TTGATCTCAT TCTTGACAAA TCAAGAAACC AAAGAATCTG ACATCAAGAT CCTCAGAAGA ATCGTGTCTT GTGTAGCTTA CAATGTTGTG GACTTGCATA AAGACAAATG GGACGAGCTC AGTGATTGTA TCTTAACGTT AGCTAATAGT GAACCTCTTA AAGCTTTTCA TGTCTTCATT GATTTGCCAC GAGTCTACAA GGAATTTATC GATAAGTTCT TGGAGACGAT TTTGCAGAGA GCTGAGAATG TCTTGCTTAG TCCAGTTAGA GTCCAAGATT GGAGCTTGGC ATTTCAAACT TTTGTTAAAA TGTGGATTCA GCTTGTGGAT ACAGGTATGA ACTTCAAGAA GATAAGAGCG TTAATGGCGG CTCGGCTTTT GTCTGTTGTG AAATCAGTAA TTGAGTTGGT GAATGAGGAA GAGGAAGAGT TTTTGGTACA AGGGCTTGAA GATTTCGAGA GGTTCTTCTC ACGAGACATG AATTTGTATC ATTACACTAA GGATCAATAC CATTTTGTGT TGGCTTCTAT GATTGAGATC GAAAGAGTAG TCAGAGGAAC AGAGACCAAG GAGATTGTGA GGAAGATCAA AATGTTGGTT ACAGAACCGG AGAATCCTGC AATCAAACCA CAGGATGGTC TTAAGTATCG TAGAGACGAG TTTGAGAGTG GCTGGTATGA TCATTTGAAG AGTTTATCTT CACTGGAAGT GTTAAAGATC TTTGCTTCCA CTGATCTTGA AGATAGGTCT AGAGAGATTG CAATCAGACG GCTCAATGTG TTACTATCTA ATCACTTCTC AAAGAAGGCG CCAATAGTCA TTTCAGAGTT CAGAAAACTC CAGCCATTGC TTATCTCTTG CCTTAAGGAA GAAGGCATCT CTGACAGTGT GTTCAAAGTT CTAGGTCAGG TGGTGAACCA CGTTGCGAAT GAAATGTTTG TCTACCAATA TGAGTCATGG GATGATCTTC GTGACTACTT TGCATTGCAA AGCGAAACAG AGTTTCGGAG AGCGGTTTTT GTCTTCCAGT GCTTAACAAT ACCTCTTATT GATGATGATT TTTTGAATCC TGTGATAAAG AATCTTTGTC CAGTGATAAC TACAATGCTA GACCCACCAA CAGAGTTGTT GGTAGATAAC AGTTGCTGGG TCTTGGCGTT TACGAGTGCC TTCTGTGCGG TTATTCACAT GATAGAGGAC CCAGGTTATG CTGAATCTCC TAAGGAGATT GCATATAAGA TGATAGAGTC AGTGAGAAAG CTTGTGGAAA GAGAAATGGA AGTTGGACTT GTAAGGAGAG CTTTCAGAGA TGTGGAAGCT ATTGTCAAGA AACAACTGGA ATGGTACAGT ACAAACGAAT ACAAATTCGT TAAGGGTCTG CTTTGGAGAC TTTATGATCT ACCAGGAGCA CTCGATGATG CAGCTGTGAC AGAGGCCTTG GAGTTGCACA AGATAAAGAG CCGTCAATGG GCAATTTTCA AAACTTGTGC TGTGAAAGGC CAAAGACTTT TCTACTGGTT GAGTAACACC TTGAAATCAG GGAGTGAATG TGTAATCCGG ATGCTGAACA TGAATCAACC TATGAATCCA AACGAGGAAT GTTACAAAGC CTTGACCTAC GACGATTTCT ATGAGAAGAT CATCGCTCCT CTGATTCAAG TGAAGGATCT TCGTAAACAA GGCGTAACTA ACCTGCTTGT TTGCAAATAT AACAACCATT TCACCTGCCA TCGTCAGAGA TGGTAATCTT CTTACCGCAG AATAAG 
Length2096
Protein Sequence
Protein Residue
Map Locationscaffold_7: 19010332.. 19013733
Download Sequence
A.thaliana
AGI-codeAT5G37420.1
DescriptionFamily of unknown function (DUF577)
TAIR curator summaryNote that previous reports (Plant Cell 2003,15:1538; PNAS 2003, 100:13407) have incorrectly named AT5G37420 as AGL105. AT5G37415 has now been named as AGL105 based on Plant Cell 2003, 15:1538 where the GenBank accession number given for AGL105 is AY141227 (Supplemental Table 3), which corresponds to AT5G37415.
Alias
Gene coexpression
MR
MR Locus Description
36.5377 Ahg346029 Protein kinase superfamily protein
39.9249 Ahg492862 Pentatricopeptide repeat (PPR) superfamily protein
58.3695 Ahg329713 Pectin lyase-like superfamily protein
61.1555 Ahg951551
85.9767 Ahg940347
95.7914 Ahg494865 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression