Detail



ID : Virus2204

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionWhite_clover_cryptic_virus_2|plants|dsRNA
Sequence
AGATTATTCT TAATCGGCCC CCGAAAGAAT TTAAGAATTC ACATTCGTCT ATATTATCAA GTTTTTACAC AACCTCTGCT CTAATTCCAA GATGTCTCCT GATGAGAACC CCACTCTCAA CAAGACCCCT AAGAACCAAA CTGTTGAACT CGTTTTTCAA GATACCAAAG TTCCCGTTCC CTCTGATAAC TTCATGGAAT CAATCCGCTC TAACGCTGCT GCTCACACTG ACACTGCTAA TCAGTGGATC ATTGATGTTT TCCCAAACAT GACTCCAATA CTTCTGTACG TTATGCATTA TACTCACTTA TATGCTCAAG CTACTGAATA TCGCATTCAT GCCAAATCAT CTGTTTACAC TTTGTGTATG TATTTCATGA CTATTGTCTA TGGATACTTC TTGCTGAATG ATATCTACAC CCGCCCTGCG CGGTCTGTTC ATGCCCGTAT TTGGATTGAA TCTTCCTGGA GATCTGAATT TGTCAAATTT CTGACGACTC TTCCCGTCCC AGATATTCTT AAACCCATTC TGTCTCAGTT CCATCCTTTC ACTACTGCTA GAACTAAAAA TGTGTTCTTT TGCCCCTCTG CTGCTGGATT TGATCATGAC CAATTTTTTG GCCGTACTTA TCCTATGAAT ATGTTCGCTG CTATTCACGA CTGCACTGCT ACACTTCCTG GTAACTCTAC CAGAACTGAT GTTTTTCGTG ATTTGTACTC AAGAATTCTG TATTCTATAA CTACTCCTGC TTATACTTGC GTTATTCCTG ACTTGATTGG TGCTACCCCC GATCAAACAA CCCGAACAAC GATAAACTTT ATGAACTCAA GGCTCTACCA AACCTTTAAC TCTCTGTTTA ATCCTGTTCT TTTCCGCGAC TCCCAGCGCC GTGCTGCTCT TGCTGCCCTC TCATTTACTG CTCCTACTTA CCCGACTAAC CATATCAATG CATATGATTA CCTGTTCTCT GCAACCGCCC CAAATCTTAG AGAACTAAAG ATTGTTATAC AATCTGTGAT TGCATGCTCC AAAGGTGTTT TTGATGTTTC CGGAACACTC GGATCTTATG TTTCTGATTA TTCCTCTTCC TCAATTGTCC ATCATGGTTA CTCTACGTAT CCACTCCCTG TCTGGTCTCA TACCGATGAT GCCACCAAAC CGCAAACCTT CACTGCTGCC ACAATTTTCC AACTGGTCAC TGAAGATGCC AGAGCTCAAG ATATCTGCTT CCTCCAACGC CCTGCTGCTG AGATTGCCCA CACTCGTCGT ATCACTGATT TGACTTATGC TTCAACTGCT ACTCCCACTG TTCCAGCTAC AATGCCTGCA AATCATGGTA TATTTCGAAT TTGGCCCTAC TGTCTCCGCT GTGACAATGA TGCCGAAAAT GGCTTCCCTC GTCACGACAA TGAAGATCTC GTCGCTTACT CTGATGAGAT TCACACTGCT CCAAGCGTTC TTGTCCTCGA TACCCCTGGT GATACTGTTA TTAGTGCCCA TATGCCTACC GTTGTCGGTA AGGTAATTGA GTCTTTTGAA CTCGATGGCT CTACAATCGC AATGCCTGAT GCTAGAAAAT CACTTGCCAT GCAAAACTGC ATGTTTGCTG ACTCTGCCAT TGCTTACAAG TATGTTCGTC CTGGATCCTA CTGGCGCCCT CGTGCTGCTG GTTCCATCCT GCCACCTCTT AATCGAGCCC TCCCTACTGC TCGCCCCCGT TTACCAGCTT CCTCCTTGCT TCATGACAGA ACTAAGGTTT TCCTACCTCA GTTGAATGCT CATGTTAACG CTATTCCTGA AAATAATCTG CTTCCTGGAT TTACTCAGTT GACTCCTGTT AATGTCATTC GCTATGTCCA GCCCTTCTTC GGTTTTCACA CTGTTGATCG TACTGCTAAT GATGCTGCTC TTGATGCTGT TCCCGGTATG GCTGAAGGCC ATTTGATGAT CTGGTCCCCA TACACTTACA ATCCGTATGA GTCTGATGAT TATCCTCCCG TCGCCCTTGA TGCGTCTAGA CACTACTACC TGACTAATCT GCGTACCATT TTTGGTACTG ACTACAATCT TGTTAGTGTC AAACACATCT ATGAATCCTA CCCCGCTGTC TAAGTGATTA CTCTCCTTTT CTTTTAATTA AAGTTTAAAA GTTTTTGATG TTTAATCGTT TTCTTTCCAG CGAACACGCC TACACTGCGT GGTTCTTTTG TTTCGTTTTA ATTTTATGAA CTTTTGTTTA TGTTTTTTTC AACGTTGTTT TCTTATTAAG AAAAAAAAAA TAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAACAAA CAAAAAATAA AAAACCCCAG ATTTATTTAA GACGGCCCCC CCCGTTCTAA TATTTAGAAT TCACATTCGT CTATCCATCC CTTTAAAATA ACAGCTCACC CTCTTATTTT CTACTAACGT CCAACCATGC CTCACAACTC CACTCGCAAT TATCTTGCGG AACGTATGAT TCGTACTAAA AGAGAATTAA TGACTTACCA GTCAAAAGAC CGTGATCCCG ATGCAATCCT TGAAGCCTCT CAAGATCAAG ACTACCGTCG TCATTATGAC AACGCCCGCT ATGATCCCTC AAATGAGGTG AAATACCGCA TCCTTAATAA GGAATACTCA ACACTAGTTG AAGCCTATCG TTTAAGAAAT GATAGAAAAC ATCAGCCTTA TGAATTACAT CAGCCCATCC CTGAAGATGC CGCTCCAATT CCTAAATCTC GTGTTCCTGC TCCTGGTTTG AAACTTGTTC CTCTCATGTA CCATTATGGT CATGTTGTTC ACGAGCCTGC TCACTCTGAT GAATCCGATT CCGATGATAA CTCCGATGCT CCGACTAGGC CAGTTAAAGA GTCAGTCCCT CATTTCGGCT ACCCTGTTAG CAAAAAGATT TTTGATCTTA TTGTTAGAGT TTATCCTGAA TACATTAAGG TGATTAACAC TTACTGTCGC CCTCTTGGAA CTGTTGAAGC TACCTTTGCT GATTTTAATA AAGAACAGAT TCCTTCTGCT CCTATTAATT CTAAGAGAAG AGAAACTGTG CTCAAGCACA TATTCAAATT CCTTGATACT CAGCCTTATC TCCCGCTTCA CTTCGTTGAT ACACAGTATT GCAAAACTCC CCTTGTTACT GGAACTGGTT ACCACAATCG CTATTCTTTC AAACAGAAAG CACATGCGAA ATATTCTCAT CCTGAAGAAT ATGCAAAGAT GCATACTTCG AAAGGCTATT TTTACAACGC CACTTATGAG AACGCTCGCA CTCTAGTCCA CTTTATTAAG CAGTTTGGAT TACCATTCAA TCTGCAATAT GCCCCTGAAG ACGCTGACCT CACTGATGAT CAGGTTCAAT CCTACATTGA TGCTGCCAAC AACTTCTTCA ACGACTATCC GACGTTATTG TTCACTCGCA ACCACATTTC AAAACGAGAC GGTACCTTAA AAGTTCGTCC TGTTTATGCT GTAGATGATA TTTTTATCAT CATCGAACTT ATGTTGACAT TTCCGTTGAC TGTTCAAGCT CGAAAGCAAT CGTGTTGCAT TATGTATGGT CTCGAAACCA TTCGTGGTTC CAACCATTAC ATTGAACGCC TAGCTCGCTC GTATTCGACC TTCTTTTCAT TAGATTGGTC CAGCTATGAT CAGCGCTTAC CTCGCGTCAT AACTGATATT TATTACACTG ACTTCCTCCG AAGCTTAATT GTAATTAACC ATGGATACCA ACCGACCTAT GAATACCCTA CTTACCCTGA CCTTGATGAA CACAAGATGT ACTCTAGAAT AGATAATTTA TTATACTTTC TTCACACATG GTACAACAAT ATGACTTTCG TCTTATCCGA TGGTTATGCT TACCGCCGAA CCCATTGCGG TGTACCCTCT GGCTTGTACA ACACACAGTA CCTTGATTCT TTTGGTAATC TATTTTTAAT AATTGATGCC ATGCTTGAAT TTGGTTTCAG CGATGCTGAA ATCGACGATT TTATCCTCCT AGTTTTAGGA GATGATAATA CAGGTATGAC GGTCATTCCC ATTGACCGGA TTTATGACTT CATCAACTTT CTTGAAAAGT ACGCTTTAGT ACGATATAAT ATGGTCCTTT CCCCGACCAA ATCCGTGCTA ACTACTTTGC GCTCTAAAAT TGAAACCCTT GGCTACGAAT GTAACCATGG ATCACCTAAG CGCGATATTT CCAAGCTCAT TGCCCAACTC TGCTATCCAG AGAATGGTCT TAAGCCACAT ACTATGGCTG CCCGAGCAAT TGGAATAGCG TATGCCGCTG CTGGCCAAGA TTTTATGTTT CACTCATTTT GCCATGATGT GTATAACATA TATAGGTTAG ACTACAAACC TGATGCCCGC ACTAATCTCA ACTTCCAACG CCAGATTTAC CATAATCTTG AAGATGGAAT TCCAGATCTT GCAACATCAG TTGTGCCACC ATTCCCATCA CTATATGAAG TACGCCATAT GTACTCTCAA TACCAAGGCC CTTTAACGTA TGCTCCAAAA TGGAACTACG CTCACTTCAT TAATGATCCG GATGATGTAC CACCCAATCC CAAAACTATG CGCGAATATG AAATTGAGAA TGATCTCATA TCTCGTACTG CACCTACTTT TGAAACGGTT GTGCCTGCCA CAAGAAATTT CCCGTGATTA TTTTGTGCTT TATAAGCATA GAAATTTTTC TCGCTAATTT AAATTAAAAT AAAACACAAA AAAAAAAATC AAAATAAATC CCC 
Length4783
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg941960 Lipase class 3-related protein
3.16228 Ahg915062
3.16228 Virus3477
4.47214 Ahg906648
10.9545 Ahg931931 glutamine synthetase 1.3
10.9545 Ahg931778 glutamine synthetase 1.3
10.9545 Ahg942996 glutamine synthetase 1.3
10.9545 Ahg928382 glutamine synthetase 1.3
15.5885 Ahg945553 glutamine synthetase 1.3
16.4317 Ahg938169 glutamine synthetase 1.3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression