Detail



ID : Virus2907

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionAurantiochytrium_single-stranded_RNA_virus_01|algae|ssRNA
Sequence
AGTAAAAAGG TGTGCGGGGT AATCCCCCGC ACGCCTTTGT TTGTAGAATG CACTTATACA GATTCCGCTC TTGCCGTTAA TTATACCGCT CTTGCCGCAA TCTGTCACCA GATCCGCCAT TTCCGCTATA AACGCCATTT ACGCAATCTA AACTTGTTTT CTCTTTCACT AGGTTATGCT CACCTAATTA CTCAAATTTG CTACACCACC CACAGCACTT GATTAGTCAC CACTTGCTGC TTGTATTATA TAGACTCTTT TGTACACATT TAATGTACCA TATTTATTTA CCAATTATAG AAGAAAAATA AAAATCAAAT AACCAGAAAA TAAAAATATT TATAGACCCA CAATGTCTTT AAAATTGGAC TCAACTCTAT TTCTTTGCCG ATTTAGACTT GTTTGAACCT TTATTCCGAA CTCCTCTTGT ATATACGAGG CTAGTAAGGT AAAGTGATAT GCCCTGGACG CATGTATCGT CCTGTTTGTG AGTAAAGTAT AACTCTCTCC CTAAAAGTTT TTACGTTTGT CAGGGATAAG ACCGCTAGTG ATGTATGCCA CGGACACAGA AGTCCTATAT GCATTTAATT CCACTAGTTC ATAACGTACC CCCCCATCTT AACACCATGG ATAACTTTCA GTCTGCGTCA CACGTAGCGC TTGGCCGCGA AACAGCCCCG TTTAGCAACG TTAAAGTTAA CTACGCAGAT TTTCTGCTCC GGCTTCAGCA ATCCGCTGAA GTTGTTGATC TCTCCTCTCT GAAGGAGCTT TTCACGAACG TCTTTTCTGA CGTGACCGAG GAAGGTACTA ACTTTGCTCT CTCGCTTATG TCGCTTTTCT ATCGACTTTA TAAGCTTGAC AGCTTGACTG ACCTTTTCTT TGCCGCACTT GATTTTCTCA AGTCGGTTTG CGGTGTCAAC TACCTTGTTG ATTCCGCCCA GTTCGCTTTC GACTTTCTTA AGACGACTGT CACGAACCTG TACAATAAAC TCCTCGTCGC ACCCGCGACG ACTGAGTCCG CAGCCGTTGA TGTGCTGCGC AACCTTCGCT CTAACATGAG CCTTGTCCTC AATAGCGATA TTGTTTCCGC TATTAGGGAC TTTGTACTTA CACTTGTAAC ATTTAGGGTG TTCAACAAGG ACACCGCCTT TCGTATTACA CAGACTCTTG GACGAGCTCG ACCTGCTACT GCCGTCGAAC TCGCTGAGAT CTGTCTTAGT ACTGCCATTT CTGTGCTGAA CTTTTCTGAT CAGCTCATGT CTGGCGCGAG TCTCTCTGAG ATCTTCTGCG ACAAAAACCC TGTCGCCGCC TTTACGTCGC TTGCCGACGA ATTGGACTCA CTCAGAGCTC TCACTTACTC AGGCATTCCC GAAGACGGGA AAGTCTGCCG TCGCGAATAT CTTTCACGCG TTATTAAATG TGTGAAGGAT GGAGAGGCCC TCATGGAGGA CCTCCCTCGC AACGCGCCCC AAAGACCTCA AGTTCAAAGG TCTCTCAAGA CGGTTCGCCT CATCAAGTCA GATTTTCTCA ACATGATGAC TGGTGAATCG CGCCCCATGC CATTTTGTGT ATGCCTCGTA GGCATGCCGG GTATTGGGAA GGGCCTTCTC GTGGATTACG TATCCATGAT TTGGTCGCAC GTCAAGGGTC GAGAATTCGA CTCCTCTCAC GTGTATCACC GCCAGGCTAC AGAAGAGTAC TGGTCCGGAT ATGAACCGGC TTCCAAGCCG ATCATTCATT ACTCCGAGCC GGGCTCTCTC AACCGCAACA TCGCGAAAGC CCGTGGTGAC CCTGTGATGT CCGAGTTTCT CTCCGTCGCA GACAATCAGC CGTTCATGTG TAACATGGCT GACGTTGACT CTAAGGGCAC TGTTTTTGCA TGCCCCGAAC TCATTGTCAT GGACACGAAT GAACCAACGA TGAACCTTGA CGTACTTGTA AACAACCCCG CGGCTGTACG TCGCCGCATT TTGTACATTA CTCCGACTGT AAAGCCGGAA TTCCTTGCCA CTGGCACTTG CCGGATGGAT CAAGCCAAAT CTTTGGCCTC TGATACTCCT AAGCTTGATC GGTGGACTTT CACAGTCCAC TCGATGGAGC CTAAGGACAC CAAGACTTCT CACACCGTCA TGCACCTTCA AGGTGCTTCG ATCTACGAGT TGTCTGATTA CCTCCGCGCT CGTGCTACGA AGCACGTTGA ACAGCAGGCC GCTCGCTGCG ACCTGCTTTC CGGAGAGAAC ATTTCTATGT ATCTCACTCC TACCACACCT GTGGAAGCTG TGGTGGAGTC ATCTGATCTC TCCCCTGTAC ATACTGAGGA GCTTCCTCGC TCCGTTGCAT TTGCACTTGC CTACCAAGCG TTTTTCATCA ACCTGGAACA TATGTTCTGG GAGTGGATTT GCGCTCTTGG GCCCCTCGTC TATTGGACGA TTGTACTTAT CTTCGAGGCG ATTTTTGCCC TCATCCTGTG GTTTCATCCG CAGAATTTTT TTTTGAAGAG CTTTTCTCTC GCCATGTGGC GGGGAAGACT CAAACACACG AGTGATAAAC ACTCCCGTAG CTGGAACCAT TTTAAGGCTA CAATGGGTTT GGAAAACACT TACACACCCC GCATTCAACC CGATTACAAG GTTGCACGGT ACGTAGCTGT CCTGGGAGGA CTTCTCCTTC TTGTGAAGAG CTACCGTGCC TTTTCCCTCT TTACTGAGGG ATCGGTCCTT TCCACCCAGA AGAACTGGAG TGAGGAAGAA GTTGATGCTG CTCTTGAGCG CGTACAGCGC CAGAGCAAGT GTGACATGCC ACCGCCACGT GAAAAGCGTG GTAATGGTGT TGACTGGGAC GATACCGATC GTCCTATTCC TGTTCCTATC GACAACCAGG AGCAGAAGAA CGAGCCCGAC AAGGTCGTGG CTTCCGTTAT GAAGAACCTT CGTGTTATGC AAATCGCTGG CACGCGCACG ATCGAAACGC GCATCTTAGG TGTGTGTGAA GATTACGCGC TTGTCAATCG ACATTCGATT TGTCATGACA AGAATGGTGT TTGGGAAGCA ACCATTCGTG TTGCTCCCGA CCACGAGATC GGCGTCATCA AATGTACGCT CGATTCACGT GAATTCGTTC AGGTGGACGA AGATGTCTGG CTGATCCGCA TCCGCGGAGC ACGCTTCAAG GACATCAAGT CTTATTTTGC GTCCGATTAT GTGACGCCTC CTGCTTATGG CAGTGACGGC TTCATCGGAC ACAACCCCGT CCGTGTCAAG TCTTATGCGC CTATTACGGC GCAGGACAAG AACTGGGGAC CAGTTCACGT TTCTCGACCA CTCGCTTATG AGTGGCCTTC CCACGCAGTA GGATTGTGTG GAACCCCTCT GATCCTGAAG TATTCAAATG CTTTCGGGAT TGTAGGCCTG CACATTGCGG GCTCCAATGG TCATCTTGCT TTTTCGCAAG CCATCCGCTT TCCGGATGTC GCGAAGGCAC TCAACACGCT TTCGGCTACC ACTTGTTCAC TTGGTGTGAA CAGTGAGGGC CGTCTGCGTT TGCCCAAGAA GATCTCTGGA CTTGGTCCCG TTACTGACCG CTCCCCACTC CGGTGGGAAC AGGTGGCCGG CCTCTCCGTT TATGGCGGAT TGGTTGGTTA TCAAGCGATG AAGCTTGGAA AGTCCAAGCT CCGCAGCAGC GGTTTCATTC GTCACGCTGA AGAGCTGACG GGTGTCTCAC CTTTCAAGGA CGGCAAGCCC CTTTACGGAG CTCCGCCATT CTCACCCGGG TTTAACCCGA ACACTGGTGA GTACCAGGGA CCCTACAACC ACTTCGTAAA GAAGTGTGGG GTTGTCAAGA AGAGTCTCCA CCCTGAGATT CTTCGCCAGA CCATTGACAC CGTTCGAGAG CATATCCTCT CCGGTCTCAA GGCCAAGGGC GTCACCAAGA TTGCGCCCGT CACCCTCGAG GTTGCCCAGA ACGGGCACCC TGAGGATTTT TACATGCGCG CTATGAAGCC CTCTACCTCT GGTGGTTGGG CATGGCCTGG ATCCAAGAAG AAGTACTCTG AACAGTGCTC TCTGGATTTC AAGTCAGACG CTTACATGCC CCTTTACGAC GTGAAGGAGC AGGTCGTGGA GCAACTCCTC GCTTACGAGC GAGGAGAAGA CGCTCTCCCC CTGCTTGGAG CTCAACTCAA AGATGAGCCC CGCGCATACA AGAAGATAGT GGATCGTAAG ACCCGCGTCT TCTGTATGTC TCCGTACGAG TCCACCCTCG TCAACCGCAT GTACCTCATG CCTTTTTACA CCCTTATGGT GGAACACGGA GATATCTTTC GCACTGCGAT TGGCATTAAC ATGCACTCGC AGGATGTTGG AGACCTGGTG ACCCGCATGA CTGACTTTTC TGATCAGTTT ATGGAGGGTG ACTACGGTGG CTACGACACC AGTATGCCAT ACGACATCGG CCTTGCAGCC AACACTGTGG TTTACCAGGT CTGTCAAGAC CTTGGTTACG ACTCCCACGC CTTGCAGATG GTGCGAGGAA TCCTTAGCGA TAACCTCTAC CCCACTGTAG TCATGCGTGG TGATGTCTTT GCCGCCCCGG CTCTTCAGCC GAGCGGTAAA TACGCCACTG CTGAGGACAA CTCCCTTCGG GGGTTGATTC TCATGGTCTA CGCCTGGATC AGTGAATGCA CTGACATTGG AGACCAATGC ACGGGGCGTG CGAGGACTAC TCAGTTTCAA CCTGAGGACT TCTTCACGCA AGTGCTGCCC GTTATTTACG GGGACGACAT GCTGGCAGGG GTGAAACCCG TCGCTCAGCA ATTTTACAAC AACAACACTT ACCAGACTTT CTGCAAGGAA GTCTATGGTT TGGAGTTCAC CAACGCTCAG AAGACGGCCG AGATGGCCAA CTTTCTTGAG TGGGATGATA CTTCATTCCT GAAGAGGTCT TTCGTCTTTC GCGAAGACCT CCAGGTTTGG GTTGCTCAGT TGGAATTGGC TTCCATCATG AAGTCAATAT GTTACTACTT ACCGAGTAAA TCGGTGAATG AGGATGACCA GCTTATCGAT AGCTGTGTCT CCGCAATGCG CGAGCTCTTC TTCCACCTCC CCAAGGAGGA ATTTGAAGTT CGCAGAACCC GCTTTGCGGA AGTCTGTGCC GACCTTTTCA ATAAGGACGC TACAGATGTA CTTAAGGTGT TCCCGTCTTT TGACTGCATT AGGCAGTCGC TTTACGGAGT ACCGACCTGA CTTAACAGTC AATCCTATGT ACCCTATTTA TTTATATACC AGCATCGCCA CGAAGCACCT GAATATACCT CTTGTAAATA CGAGGGCTGC TAATGCAGTT CGGAGATCAG GCCCGTAAGT TAGTGGGTGA AATACGAAGT GAACCTTTGC TGAAGGCTAG CCCAATGCGG GCAGTATACT ATATGGATTA TGTTTATTTT ATTACTTTTT ATCATGGTGG TCAGCCCACC GAAATTTTCA CTGAGGCTAA GGAGAAAGAC AAGTCTGCCG ACAAGTCTAA CCGAAAGCCC AGTGCTCGGG AGCGTGCCGC CGCATTTCGC AAGGCAATGG AACAAGCTGA AGCTGATATC AAAGCTAAAG TTGAAGCTCC CTTCACTACC AAATCTGGTG TTCCTTTTAT CGACGCTATG AGTCTGACCG AGCTTCAAGC TCGGCCAGAT CTTGGGCAGG ACAGCGCTAC GCGCAAAGCC TACCAAGTGC GGATGCATGG TCTCGCTGCA CAGCATGCAG CGGAACTTAC AGCCGTTCTC AAGAATCGTC GTGAAGTCTT CCGAGCTGCC AAAGCTCAAC GACGCCTTGA AAGGCGTGGG AAGATTCTCA CTGAATCTAA GGAAGTTGGT GAGATGTCTA TGGGTGGCAT CGACCACACC GAGACTCACC AGAACGTCCA AGACCATACC GGCGAAGCCT CTGACAGGGT TACCGTTGGT TCTTCTATTC AGGAGACTGG AGATGGTAGT GGAACACAGT ATTCGTTGAA CTCTTTTTTC GAGCGTCCTG TCGCCATTTA CGATGCGACG TGGGACTCTG GCACTGAGTA CAACGTCAAT TTTGAGCCAT GGGACTTATG GAGCAAGGAT ACGTCCGTTC GAGCTAAGCT CGCGAACTAC TCCTATTTCA AAGGTACTAT GCACATTAAG ATTGCGACTA CAGGTACTCC GTATCACTAC GGAACCATCA TGGCTTCTTA CCAGCCTTAT GGAGTCTACA ATCAGAACCT CATCAAGTAC GATGAGATGA TGAACGCCAC CACACCGGGG CCGGGGCCAA CGCTCCCCGC CTACAAGTGC TATTTAAGCC AAGCACCTGG TGTTGCGTAC ATCGACGTGA AGGAGAACCA GCCTGTCGAG CTAGAGATTC CCTTCATTAG TCACAAACCC AAGTTCCGCC TTTTTAACAA CTCACCGGAC GTAATTACCA ATGCGACCAG TTTTGTTGAT TTTAAGGAAG CTGGCGAGCT TCGGCTCGTC ACGTTGAACA AGTTGGCTGT CGCCAACGAC GATTTTGATA GTGATGTTTC ACTGAACATA TACGCGTGGG TAACCGACGT TGAGTTGGGC AACATTACCG CGACGGACAT GGACATCACC GCCCAATCTA AGGATTTGAC CATCTTCACT GAAGGTCGTC CGAAGAAGAA GGGTTTCAAC CGTGACAAGG CAGAGGGTGA CGCTAAGGCC ATTCGAAAGA AGGCCGAGCA ATTGGAGGAC GAACTTTCGT CTGACGATGA CGATGATTCC TATAACCAGA GATGGTCAAA GGAGGAAGAC ACCCGTCACA AGACATGGGC AAAGTCGAAA GAAGACAAGC CCATGTATGG CAAAGGTAAC TTTGGTGAGC GCTTTATGAC CTCCCTTGAA AAAGGGGGCG ACGAGTACGC AACACCTGGC CCTGTAGCCA ACATTGCTAC GGCTGTCTCC AACATTGGGA ATTCTCTTAA GGATATTCCA GTTATCGGAG GCTTCGCCAA AGCTACCTCC ACCATCGCCA ATGGTGTAGG CAGGGTAGCG TCTTGGTTTG GGTGGTCTAA GCCACTCGTC CTTGACGACC CGACCTTTGT CAAGACGATT CCGTTCGCCA ACGGAGCCGT TACTATCGGC AAAGATACTC CACACAAGAT TTCGATTGAC CCGAAGCAAG AGCTTACGGT TGATCCTACC CTTGGTGGAA TGGATGACGA TCAGATGGCC CTGCTCAACA TTACGAGCAG GGAGTCGTAT CTTACGACAT TCACTTGGTC CGACAACGAC GTCGCTATGA CGACAATTTT GTGGAAGACG TTTGTAACGC CTTACCTAGG GCAGTATTTT TCCAGTGGCA CTACCCTTTT TCAGCCTACT GCACTGTCTT TTGCCGCTCA GCCATTTATG TACTGGCGCG GCAAGATCAA GTTTCGCTTT GAGGTGGTGT GTTCTAAGTT TCACAGGGGT AAAATTCTTT TTAAGTTCGA CCCCAATGTG GCTATGCACG CACTCATCTC GTCCGGATCC ACTAAGCTCA ACCAGCAGAA CACCGTGATT CTTGACATTC AAGATGCTCA AGATATAACG ATTGAAGTTG ACTGGGCTCA TGTGCGCAAC TGGGCTAGCG TTCCTTCACC TTACGCCCTT CCCTACACGA ACAGTGAGGC TCCCATTCGG AATCTCAGTC CTACAGAGGC GAACGGCTTT TTGGAGGTGA GACCGCTCAA TGAGCTGGTC CAACCAACAG ACTCCGCTGA AGTGGCCATC AACGTATTTG TCTCGAGTGA TGACATGCAG TTTAACCTCA TGAACCCGAG ATATTTGCCT TTCCAGCGGA ATATCACTAC TGAGTCTATG GATGTGTCTT CCGACACCAT CAATCCTAAC GATTCGAAGG TCGATGAGAA GATTTTTCTA AACCACTTTG GTGAGAAGAT TTTCTCGTTC AGACAGCTGC TCAAGCGCTA CGTCACGACT GATGGCGCAC AGAATGTCAG TGGTGATCAA GAGGGCCTGG GACTAATTAC ATGTAACGGA ACCCTTTACC CCACCACTTT GACGCGCCAC GCGAATGACG ACAACGGGCA GGTGATTGGA CTGTTCGACT ATCTCCGTTA TGCCTACATG GGCGTGCGCG GAGGTTACAG ACACCGTATC CTGATCAACA CAGGGCACGA TATTACACGT AGCTCGTATA CACGAGTCAC GTTGGACGAG CAGTCTTTGA CTGACGCATT TTTTAACACC GGAAGCTTCA AGCTCACATC TCCGGAGCCG TATTTCGATA TATATTACAA TACCATCAAC GGCGCTTTGA TGTTTCACCA CCATACCAAT GGTGGGATTG AGTTCGAGCT TCCATTTTAC TCGGAGAACT TGTTTCTCCT TTCCTTTGCC GAGGACTACG GATATAACTC CGCAGAACCG GGCATCGGCT TTTCCACGTC TCTGCAAAAT GCATCTTACA GCGTGGAGAC AACATGCACC CTCAAGGGTG TGCAGACGAC GGTCATCACG GATGATACCG CACCTGCCGA GGATTTCACT TTCCTTCGGT TTCAAGGTGC TCCGTTCTAC ACGGAGTCTG CAGACATTAC GGACGACATG GTCGTCCTTC CCGAAGGGGA GGTCCTTAGT TGGAGCTATA ATGCAAAGGA CCAACCCTTC AACCCCACTT ACCTTGATGC TCAGAGAGTT GTTAGGTGGG TGGTTGGCGC GAAAGCGCCC AAAGTCATTT CCCCATATCT TGAACAATAT GAAGTTTAAA GACTTGCGGA TTAATTTCAC TTCTAACTGC TGCATTAGCG CTCCACAGCA GGACATTGAA GAAGTTGAAA GTGACAAATC CTCCTCAAGG GAGGTCGCGA GGAGACGCGT TAGCAAAAAT GCTGATGGCG CCCATTCTAT TTCTACCGGA CTTAGTCCGG TAAAAGAGAG ACCAGAACAG GTTTCAAAGG ATGGGTGACC CATCCTGGAA TTTTCCTGTT AGTATCTCTC CAGATTTAAG AGTGGACGGA CATTAGTCTT CGATTCCCAA AAAAAAAAAA AAAAA 
Length9035
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg923467
2 Ahg925630
2.82843 Ahg890521
3 Virus3757
4.47214 Virus1770
7.48331 Virus1461
10.6771 Ahg932955
11.7473 Ahg916430 low-molecular-weight cysteine-rich 86
12.49 Ahg351375
13.0384 Ahg899919
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression