Detail



ID : Virus3543

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionPapaya_ringspot_virus|plants|ssRNA
Sequence
AAATAAAACA TCTCAACACA ACATAATCAA AAGTACTTCA ACAAACATCA ATTTATCTCA TTTTCAATTG TCATAACAAG CAACAATGTC TTCTTTGTAC ACTCTTCGAG CAGCAGCTCA GTACGATAGG AGGTTGGAAA GCAAGAAAGG TTCTGGTTGG GTCGAGCACA AACTCGAAAG GAAAGGTGAG AGAGGAAACA CTCACTATTG TAGTGAGTTT GACATTAGTA AGGGTGCCAA AATCCTGCAA TTGGTGCAGA TTGGTAACAC TGAAGTTGGA AGGACCTTCC TGGAAGGTAA CAGATTTGTT CGTGCGAATA TATTTGAGAT TATCCGGAAA ACCATGGTTG GTCGTCTGGG ATATGATTTC GAAAGTGAAC TATGGGTCTG TCGCAACTGT GACAAAACTT CTGAAAAATA CTTCAAGAAA TGTGACTGTG GGGAAACATA TTATTATTCT GAAAGAAACC TGATGAGGAC AATGAATGAC CTGATGTATC AGTTTGACAT GACACCATCA GAGATCAATT CTGTCGATCT CGAATATCTT GCTAATGCGG TGGACTATGC TGAACAGTTA GTCAAGAGAT CTCAAGTTCC GGAACCTGTG GAACTTGCAA TGATGGAACC AATTGTGGCT AGTGGGGAAG GTATTCTAAT GGTTTCTGAA CCAGAAGTTA TGCCCGTAAC TACCAAAGTT GAAGAAGCAT GGACAATACA GATTGGGGAA ATTCCTGTCC CACTTGTCGT CATCAAGGAA ACGCCAGTTA TCAGTGGTGT GGAAGGAACT CTGAACTCAA CTGGTTTCTC ACTTGAAGCT GATATTACAA AACTGGTGGA AAAGGAAATC CTTCAGGAAG AGGTGAAAGA AGCAGTGCAC CTGGCACTCG AAGTTGGTAA CGAGATTGCT GAGAAGAAGC CTGAACTCAA GCTAATACCA TATTGGAGTG CTAGCCTTGA GTTGCACAAG AGAATTCGTA AGCATAAGGA GCATGCTAAG ATTGCAGCAA TTCAAGTTCA GAAGGAAAGA GAAAAAGACC AAAAGGTATT CTCAGCTCTG GAGTTAAGGC TTAACTTAAA ATCCAGGAGA AGAAATCAAG CTGTAGTTTG TGACAAAAGA GGCACACTTA AATGGGAGAC CCAAAGAGGT CACAAGAAGA GTAAATTAAT GCAACAAGCA AGTGATTTTG TTGTCACTCA AATTCATTGT GATTTTGGTT GCAAAACTCA ATATTCTGAA CCTCACATCC CTGGCATTAA GCAATCTACA TCTAAGAAGA TCTGCAAACC GCGTAAGCAT TCGAGAATTG TCGGTAATAG CAAGATAAAT TATATCATGA AAAATCTTTG TGACACAATT ATTGAAAGAG GCATTCCTGT GGAGCTTGTT ACGAAGCGAT GCAAGAGAAG AATTCTTCAG AAAGAGGGTA GAAGCTATGT GCAGTTGAGG CACATGAATG GCATTCGTGC ACGACAAGAT GTGAGCAGTT CGCCCGATAT GGAGCTGTTA TTTACGCAAT TTTGCAAATT CCTGGTTGGA CATAAACCAC TCAAATCCAA AAATCTGACG TTCGGTTCTA GTGGTCTGAT TTTCAAGCCG AAGTTTGCCG ACAACGTGGG GCGATATTTC GGCGACTATT TCGTTGTTCG AGGACGTCTT GGAGGTAAGT TATTTGATGG TAGATCAAAA CTAGCGAGAT CGGTCTATGC CAAAATGGAT CAATACAATG ACGTGGCTGA AAAATTCTGG CTTGGTTTTA ATAGGGCTTT TCTGCGGCAT AGAAAACCAA CGGACCACAC TTGCACGTCT GACATGGACG TTACAATGTG TGGGGAGGTA GCAGCTCTTG CAACTATAAT CCTGTTTCCG TGCCACAAGA TAACTTGCAA CACTTGCATG AGCAAAGTAA AGGGAAGAGT AATTGACGAA GTTGGTGAGG ATTTGAATTG TGAGCTTGAA CGTTTACGTG AAACTCTTTC AGCATATGGA GGGTCATTCG GACATGTCTC AACATTACTT GATCAATTAA ACAGAGTTTT GAATGCGCGG AACATGAACG ATGGAGCTTT TAAAGAGATT GCGAAGAAGA TTGATGAAAA GAAAGAGAGT CCTTGGACTC ACATGACAAC CATCAACAAC ACGCTCTACA AAGGTTCGTT AGCAACTGGC TACGAATTTG AGAGAGCATC TAATAGTCTC CGAGAGATCG TTAGATGGCA CCTCAAAAGG ACAGAATCAA TAAAAGCTGG CAGCGTTGAA AGTTTTAGAA ATAAGCGTTC TGGGAAAGCT CACTTCAACC CAGCTCTTAC GTGTGATAAT CAGTTGGATA AGAATGGTAA TTTCTTATGG GGTGAAAGGC AGTACCACGC TAAAAGATTC TTTGCCAACT ATTTTGAGAA GATTGATCAT AGTAAGGGTT ATGAGTACTA TAGTCAACGC CAAAACCCAA ATGGTATCAG GAAAATTGCC ATTGGTAATT TGGTATTTTC AACAAATTTG GAGAGATTTC GGCAGCAAAT GGTTGAACAC CATATTGATC AAGGACCAAT TACTCGTGAG TGCATTGCAT TGCGTAATAA CAATTACGTC CATGTATGTA GCTGCGTAAC TTTAGATGAT GGAACTCCAG CGACAAGTGA GTTGAAAACT CCTACCAAGA ATCACATCGT TCTTGGTAAT TCTGGTGATC CTAAGTACGT TGACCTGCCG ACTCTTGAGT CTGATTCGAT GTACATAGCT AAAAAGGGTT ATTGCTACAT GAACATTTTT TTAGCTATGC TCATAAACAT ACCTGAAAAT GAGGCGAAGG ACTTCACAAA AAGGGTTCGT GACCTTGTGG GTTCAAAACT TGGAGAGTGG CCAACGATGC TAGATGTCGC AACATGCGCA AATCAGCTGG TAGTTTTTCA TCCTGACGCA GCCAACGCAG AATTACCGCA AATTCTAGTG GATCACCGAC AGAAAACAAT GCATGTCATC GATTCTTTTG GGTCCGTGGA TTCTGGATAT CATATATTGA AGGCAAATAC AGTCAATCAG CTGATCCAAT TCGCTAGGGA CCCACTCGAT AGTGAAATGA AGCACTACAT TGTCGGCGGA GAGTTTGACC CGACTACTAA CTGCTTGCAC CAGTTGATTC GTGTCATCTA CAAGCCTCAT GAACTCCGGA GCCTGCTCAG GAATGAACCG TACCTAATTG TGATTGCATT GATGTCACCA AGTGTACTTT TGACTTTGTT CAATAGTGGT GCGGTTGAGC ACGCGTTGAA TTATTGGATC AAAAGAGATC AAGATGTTGT TGAGGTCATT GTTTTAGTGG AGCAATTATG CAGGAAAGTG ACGCTTGCTA GAACAATCCT GGAGCAGTTT AATGAGATTC GTCAAAATGC GAGAGATTTA CATGAGCTAA TGGATCGAAA CAACAAGCCT TGGATTTCAT ATGATCGCTC ATTAGAACTA TTGAGTGTGT ATGCGAATTC GCAGTTGACG GATGAAGGTC TACTCAAGCA AGGATTTTCA ACATTAGATC CTAGGTTGCG TGAAGCTGTG GAAAAAACCT ACGCCACTCT TTTGCAGGAA GAATGGCGTG CGTTAAGTTT GTTTCAAAAG TTGCACTTAA GGTACTTTGC GTTCAAATCA CAACCGTCTT TTTCCGAGTA TTTAAAGCCA AAAGGGCGCG CAGATTTAAA AATTGTATAC GACTTCTCAC CGAAATATTG TGTACACGAG GTCGGAAAAG CGTTCCTACT GCCAGTCAAG GCTGGGGCTA AAATCGCATC GCGAATCATT AATGGTTGCG GAGCTTTCAT TCGGAAGAGT GCCGCAAAAG GCTGTGCTTA CATTTTCAAG GATCTTTTCC AATTTGTACA TGTGGTGTTA GTTTTAAGCA TTTTATTACA AATCTTTAGG AGTGCGCAAG GAATTGCCAC AGAGCATCTA CAATTGAAGC AGGCGAAGGC AGAAGTGGAG AGACAGAAGG ATTTTGATCG TCTGGAGGCT CTATACGCTG AATTGTGCGT TAAGAGCGGT GAGCAACCAA CTACTGAAGA ATTTCTTGAT TTTGTGATGG AGCGTGAGCC AAGGCTTAAG GATCAAGCTT ACAATTTAAT ATACATACCA GTGATTCATC AAGCAAAATC AGACAATGAG AAAAAGCTCG AGCAAGTCAT TGCATTCATC ACATTAATTC TAATGATGAT CGACGTGGAT AAGAGTGATT GCGTTTATAG AATCTTAAAC AAGTTTAAAG GCGTGATAAA TTCTAGCAAC ACAAATGTTT ATCACCAGTC TTTAGATGAC ATTCGGGATT TCTATGAAGA CAAGCAGTTG ACTATTGACT TTGATATTAC TGGAGAAAAT CAGATCAATC GAGGACCTAT AGACGTTACG TTTGAGAAAT GGTGGGATAA TCAATTGTCC AACAACAATA CAATTGGCCA TTATCGAATC GGGGGAACGT TTGTTGAGTT TTCACGGGTT AATGCAGCCA CTGTGGCTAG TGAGATAGCT CATAGTCCTG AGCGTGAGTT TCTTGTTCGC GGAGCTGTTG GTAGTGGTAA ATCAACGAAC CTTCCTTTCT TGCTCAGCAA GCATGGTAGT GTGTTGTTAA TAGAGCCCAC CAGACCTCTT TGTGAGAACG TTTGTAAGCA ATTACGTGGT GAACCATTCC ATTGTAATCC AACTATTCGC ATGCGCGGAT TAACGGCTTT TGGTTCTACC AACATCACAA TAATGACAAG CGGATTCGCT TTACATTATT ACGCTCACAA TATTCAACAA TTGAGGCTCT TTGATTTCAT AATCTTTGAT GAATGTCATG TCATAGATAG TCAAGCCATG GCCTTCTATT GTCTGATGGA GGGGAACGCT ATTGAGAAGA AGATCCTTAA AGTTTCTGCT ACGCCACCTG GGCGTGAGGT TGAGTTTTCA ACACAATTCC CAACAAAGAT TGTAACGGAA CAATCCATAA GCTTTAAGCA GTTGGTTGAC AACTTTGGTA CTGGTGCGAA CAGTGATGTG ACTGCCTTTG CTGATAACAT ATTAGTTTAT GTCGCAAGTT ACAATGAAGT GGATCAACTA AGTAAGCTCT TATCCGATAA AGGCTACTTG GTCACTAAAA TCGATGGAAG AACGATGAAA GTTGGAAAGA CTGAAATTTC CACTAGTGGC ACAAAATTCA AGAAGCATTT CATAGTTGCC ACAAATATCA TCGAGAATGG CGTCACACTT GACATAGAAG CCGTTATAGA TTTTGGGATG AAGGTAGTAC CTGAGATGGA TTCAGACAAT CGCATGATCC GGTACTCGAA GCAAGCAATC AGTTTTGGAG AGAGAATTCA AAGACTTGGT CGAGTGGGAA GACACAAAGA GGGAATTGCA CTTAGAATTG GGCACACAGA GAAAGGTATC CAAGAAATTC CAGAGATGGC AGCTACTGAA GCGGCTTTTC TGAGCTTCAC GTATGGCCTG CCTGTTATGA CCCACAATGT AGGGTTAAGC TTGCTCAAAA ACTGCACTGT GAGACAAGCA CGCACAATGC AACAGTATGA ACTAAGCCCG TTCTTTACAC AAAATTTAGT GAACTTTGAT GGGACAGTGC ACCCCAAGAT TGATGTCTTG TTACGTCCCT ATAAGCTGAG AGATTGTGAA GTCAGATTAA GTGAAGCAGC AATACCGCAT GGGGTACAGT CTATTTGGTT GTCTGCTCGG GATTATGAAG CAGTTGGAGG CCGTCTTTGC CTGGAGGGTG ATGTCCGAAT ACCATTCCTC ATTAAGGATG TTCCTGAGCG ATTATATAAA GAATTGTGGG ACATCGTGCA GACCTACAAG CGTGACTTTA CATTTGGGCG AATTAATTCT GTGTCTGCTG GAAAAATTGC GTACACATTA AGAACCGATG TGTATTCTAT TCCTAGAACT CTCATAACGA TTGACAAACT GATTGAAAGT GAAAACATGA AGCATGCCCA TTTTAAAGCC ATGACAAGTT GCACTGGCCT AAACTCTAGC TTCTCTCTCC TTGGTGTTAT AAACACTATC CAGAGTAGAT ATCTAGTTGA CCACTCAGTT GAAAATATCA GAAAACTTCA ACTGGCAAAG GCCCAGATTC AACAACTTGA AGCTCACATG CAGGAAAACA ATGTTGAAAA TTTAATTCAA TCTCTTGGTG CTGTAAGAGC TGTTTACCAT CAAAGTGTTG ATGGATTTAA ACACATAAAG CGAGAGTTGG GTTTGAAAGG AGTTTGGGAT GGCTCATTGA TGATTAAGGA TGCGATTGTA TGCGGTTTCA CAATGGCTGG CGGTGCGATG CTTTTGTACC AACACTTTCG TGATAAGTTT ACAAATGTTC ATGTGTTTCA CCAAGGTTTC TCTGCGCGAC AGAGACAAAA GTTAAGATTT AAGTCAGCAG CGAATGCTAA GCTTGGTCGA GAGGTCTATG GAGATGATGG GACAATTGAG CACTATTTTG GAGAAGCGTA CACGAAGAAA GGAAACAAGA AAGGAAAGAT GCATGGCATG GGTGTTAAGA CGAGAAAGTT TGTTGCGACA TATGGATTTA AACCGGAGGA TTACTCGTAC GTGCGGTACT TGGACCCTTT AACAGGTGAG ACTTTGGATG AAAGCCCACA GACTGATATC TCAATGGTGC AAGATCATTT TAGTGATATT CGGAGAAAGT ACATGGATTC AGACAGCTTC GATAGGCAGG CTTTAATAGC AAACAATACA ATTAAGGCTT ATTATGTCCG AAACTCCGCG AAGGCAGCAT TGGAAGTCGA TCTGACACCG CACAACCCTC TCAAAGTTTG TGACAATAAA TTGACCATTG CAGGATTTCC TGACAGGGAA GCTGAGCTAA GACAAACAGG CCCGCCCAGA ACTATTCAAG TAGATCAAGT GCCACCACCC TCGAAATCAG TTCATCACGA AGGAAAAAGT CTTTGTCAAG GCATGAGAAA TTACAATGGC ATAGCTTCTG TGGTTTGCCA TTTGAAAAAC ACATCAGGAA AGGGGAAGAG CTTGTTTGGA ATTGGATATA ATTCATTCAT CATTACCAAC CGACATTTGT TCAAGGAGAA TAATGGTGAA CTTATAGTGA AATCCCAACA CGGTAAGTTT ATTGTCAAGA ACACCACAAC ACTCCAAATT GCTCCAGTTG GAAAGACTGA TCTTTTAATT ATTCGGATGC CGAAAGATTT TCCTCCATTC CATAGCAGAG CTAGGTTTAG GGCCATGAAA GCTGGGGACA AGGTTTGCAT GATAGGTGTT GACTACCAAG AGAATCATAT CGCGAGCAAA GTATCTGAAA CCTCTATCAT CAGTGAGGGC ACGGGAGATT TTGGATGCCA CTGGATATCC ACGAATGACG GTGATTGCGG TAATCCTTTA GTTAGTGTTT CAGATGGTTT TATTGTCGGC TTGCATAGTT TGTCGACATC AACTGGAGAT CAAAATTTCT TTGCCAAAAT ACCCGCACAA TTTGAAGAAA AGGTCCTTAG GAAGATTGAT GATTTAACTT GGAGCAAACA CTGGAGCTAT AATATTAATG AACTGAGTTG GGGAGCTCTC AAAGTGTGGG AAAGTCGGCC CGAAGCAATT TTTAACGCAC AAAAGGAAGT TAATCAATTG AATGTTTTCG AGCAAAGTGG TGGTCGTTGG CTCTTTGACA AATTACACGG CAATTTGAAA GGAGTTAGCT CCGCTCCTAG CAATTTGGTG ACAAAGCACG TTGTTAAAGG AATTTGTCCT CTTTTCAGGA ACTATCTCGA GTGTGATGAA GAGGCTAAAG CTTTCTTTAG TCCACTTATG GGTCACTACA TGAAGAGTGT TCTGAGCAAG GAAGCGTACA TTAAGGATTT ATTGAAATAT TCAAGTGATA TTGTCGTTGG AGAAGTCAAC CATGATGTTT TTGAGGATAG TGTTGCGCAA GTTATCGAGC TGTTAAATGA TCATGAGTGT CCCGAACTTG AATACATAAC AGACAGTGAA GTGATTATAC AAGCCTTGAA CATGGATGCA GCTGTCGGAG CCTTATATAC GGGAAAGAAA AGGAAATATT TTGAGGGATC AACAGTGGAG CATAGACAAG CTCTTGTACG GAAAAGCTGT GAGCGTCTCT ACGAAGGGAG AATGGGCGTC TGGAACGGTT CGCTGAAGGC AGAACTGAGA CCAGCTGAGA AAGTGCTCGC GAAAAAGACA AGGTCATTTA CAGCAGCCCC TCTTGACACA CTATTAGGAG CCAAAGTCTG CGTTGATGAT TTCAACAACT GGTTTTACAG TAAGAATATG GAGTGCCCAT GGACCGTCGG GATGACAAAA TTTTACAAAG GCTGGGATGA GTTCCTGAAG AAATTTCCTG ACGGCTGGGT GTACTGTGAT GCAGATGGTT CCCAGTTCGA TAGCTCATTA ACACCATACT TGTTGAATGC TGTGCTATCA ATTCGGTTAT GGGCGATGGA GGATTGGGAT ATTGGAGAGC AAATGCTTAA GAACTTGTAC GGGGAAATCA CTTACACGCC AATACTGACG CCAGATGGAA CAATTGTCAA GAAATTCAAG GGCAATAATA GTGGCCAACC TTCGACAGTT GTTGATAATA CATTGATGGT TTTAATCACA ATGTATTACG CACTACGGAA GGCTGGTTAC GATACGAAGA CTCAAGAAGA TATGTGTGTA TTTTATATCA ATGGTGATGA TCTCTGTATT GCCATTCACC CGGATCATGA GCATGTTCTT GACTCATTCT CTAGTTCATT TGCTGAGCTT GGGCTTAAGT ATGATTTCGC ACAAAGGCAT CGGAATAAAC AGAATTTGTG GTTTATGTCG CATCGAGGTA TTCTGATTGA TGACATTTAC ATTCCAAAAC TTGAACCTGA GCGAATTGTC GCAATTCTTG AATGGGACAA ATCTAAGCTT CCGGAGCATC GATTGGAGGC AATCACAGCG GCAATGATAG AGTCATGGGG TTATGGTGAT CTAACACACC AGATTCGTAG ATTTTACCAA TGGGTTCTTG AGCAAGCTCC ATTCAATGAG TTGGCGAAAC AAGGAAGGGC CCCATACGTC TCGGAAGTTG GATTAAGAAG ATTGTACACA AGTGAACGTG GATCAATGGA CGAATTAGAA GCGTATATAG ATAAATACTT TGAGCGTGAG AGAGGAGACT CGCCCGAATT ACTAGTGTAC CATGAATCAA GGGGCACTGA TGATTATCAA CTTGTTTGTA GCAACAATAC GCATGTGTTT CATCAGTCCA AGAATGAAGC TGTGGATGCT GGTTTGAATG AAAAACTCAA AGAGAAGGAA AAACAGAAAG AAAAAGAAAA AGAAAAACAA AAAGAGAAAG AAAAAGACGG TGCTAGTGAC GGAAATGATG TGTCAACTAG CACAAAAACT GGAGAGAGAG ATAGAGATGT CAATGTTGGG ACCAGTGGAA CTTTCACTGT TCCGAGAATT AAATCATTTA CTGATAAGAT GGTTCTACCG AGAATTAAGG GGAAGACTGT CCTTAATTTA AATCATCTTC TTCAGTACAA TCCGCAACAA ATTGACATTT CTAACACTCG TGCCACTCAT TCACAATTTG AGAAGTGGTA TGAGGGAGTG AGGAATGATT ATGGCCTTAA TGATAATGAA ATGCAAGTGA TGCTAAATGG TTTGATGGTT TGGTGTATCG AGAATGGTAC ATCTCCAGAC ATATCTGGTG TCTGGGTTAT GATGGATGGG GAAACCCAAG TTGATTATCC AATCAAGCCT TTGATTGAGC ATGCTACTCC GTCATTTAGG CAAATTATGG CTCACTTTAG TAACGCGGCA GAAGCATACA TTGCGAAGAG AAATGCTACT GAGAGGTACA TGCCGCGGTA TGGAATCAAG AGAAATTTGA CTGACATTAG CCTCGCTAGA TACGCTTTCG ACTTCTATGA GGTGAATTCG AAAACACCTG ATAGGGCTCG CGAAGCTCAC ATGCAGATGA AGGCTGCAGC GCTGCGAAAC ACCAGTCGCA GAATGTTTGG TATGGACGGC AGTGTTAGTA ACAAGGAAGA AAACACGGAG AGACACACAG TGGAAGATGT CAATAGAGAC ATGCACTCTC TCCTGGGTAT GCGCAACTAA ATACCTGCGC TTGTGTGTTT GTTGAGTCTG ACTCGACCCT GTTTCACCTT ATGGTACTAT ATAAGCATTA GAATACAGAG TGGCTGCGCC ACCGCTTCTA TTTTACAGTG AGGGTAGCCC TCCGTGCTTT TAGTATTATT CGAGTTCTCT GAGTCTCCAT ACAGTGTGGG TGGCCCACGT GATATTCGAG CCTCTTAGAA TGAGAG 
Length10326
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3 Virus1935
3.16228 Ahg897335
3.31662 Virus1648
3.4641 Ahg475018 Serine protease inhibitor (SERPIN) family protein
4.24264 Ahg909265
5.19615 Ahg943750 Regulator of Vps4 activity in the MVB pathway protein
6.32456 Ahg905525
6.7082 Ahg919953
6.7082 Ahg925524 protein arginine methyltransferase 6
7.34847 Ahg889891
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression