Detail



ID : Virus3904

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionWild_potato_mosaic_virus|plants|ssRNA
Sequence
AAAATTAAAA CAAAACATAA CAGAACAATC AAGAACAAAC AAGCAATCAA GTTTTCAAGC ATCCGTATTT GCAATCAGTA ATTTTCAATC TTCAAGCATT TTACAGTAAT CTTCATCAAC TTTCGCATTT TTGTTTTAGA TTTCACTCTA GTAATACCAT TCGCAACGCT CAACAGATTT CAGATGGAAT CAGTTCAAGC AACCATCATG TTCGGATCGT TCGAGTGCAA ACTCACACAG TCAGTGGCTC CTAAGGCTAC TCACATGGCC ACTCTTAGTC ATGAGAACCC AGTTAAACGT GTAATTAACC CATTTACTGC GCTGGAGAAA TCGTTGCAGC CATATCTTGA AAAGCGCATG TTTGCTGACG TGCGCAAGAA GAGTAATGGC ACGTTCGTTC TGAAGCATGC TTCTGCTAAG AAAGTTCAAA AATTGCAGAA GCTGGAAGCG ACTCGTTTGA AGGAAATCTC TGACTTCAAA ATGGGGAGTC CAAGCATCGT GTCTTCGATT TCGATAGCTG GTGGTCATAG CGCCTCGCAA ATGCAGGACG AGCCAAGTAT GAAGAGGCCG CTAAATACAA CACCATCAAG GAAGCGCAAG ATTAGCTTCA AGAAAGTTGG TATGAGTGGA ACGCAGATGA TGAACTTCAT ACGCCAGCTC AAGAATATCA TGGCTGATAA GTGTGGTGGT GTTGAGCTAG TGGGAAAGAG AACTACAAAG CTCAAGTACT CAAGAACTCG ATTAGGAGTT AAATGTATCT GCGAACTGGC ACATATGAAA GGTTCGCGTA AGCGAGTTGA CCTCAGATTG AACGGAGAAC ACACAGAATT CGTGAGGCAA TTCGCCAGAG TCCATTCATG GGGAAATACG GTAGACAGCC ATATGTTACA GCGGGGCGAT AGCGGAGTTG TTTTAAATAG CAGCGTTTGC CGTGGAAAAT TTGGACGCAA TTGGGACAAT CTGTTCATCG TTAGAGGTGA ATACGAGGGT AAGATCTTCG ATGCTAGGTC AAAGCTTACA GAGACGACTG CACTTAGAAT GATTCAGTAC TCAGTTGCAG ATCGTTTCTG GCGTGGCTTG GAAAGCAACT GGAAAGAAAG TAGGCACCCA GTCGAACATG CATGTGAAAC CACATTTAGT GTAGAGGAAT GTGGTGAAGT AGCAACGCTC ATCACGCAAG CTTTATTTCC TTGTTTTAAA CTCACATGTG GAAAGTGTGC GGAAATGTTA GCTATGAAAT CAGATCATGA ACTGTGTGAG TGTTTAAGCG CGCAAACTGC TAATGCAAAT GCACTCATTC GCGAGAAACA TTCACGGTTC AAACATGTGG AGAAAGTAAT GGGTGTTATT TCAACCAATC TTCTACCTAT GTCAGTTGGA GCTGATAATT TTAATGAAAT CTTTCGAATG ATTGGTGACA AAGTGCAGAG TCCCTTCACC CATTTGAATG CATTGAATGA ATTCTTTTTA AGAGGGCGGC AAAATGGACC TGAACAATGG CAGGATGCTT TCAATGCATT AAGGGAACTA GCTCGCTTCC AAAAGAATCG GACGGACAAC ATCAAGAAGG GAGATATTGC AACATTTAGA AACAAGCTGT CATCTAAAGC GAACTACAAC TTGTATTTGG CTTGCGATAA TCAGCTCGAT AAGAATGCAA ACTTTTTGTG GGGTCAGCGG GAATACCATG CCAAGCGCTT CTTCACGAAG TTTTTCAAGG TCATTGACCC GGTTGATGGT TACACCCCAT TCATGCTGAG GAATCATCCA AATGGTGCAA GGAAGCTAGC TATTGGGAAC TTAATTGTTC CACTGGATTT GGCTGAGTTT AGGAGCAAAA TGAAAGGAGA GCACACCAAG CAACCAAAGG TTGGGAAGCA CTGTGTGAGT ATGAAGGATG GCAATTACGT TTATCCGTGT TGTTGCACGA CGCTTGACGA TGGGAGTGCA ACTGAATCGA CAGTCTACGC ACCAACTAAG AGACATCTAG TGATCGGGAA TACTGGTGAT ACAAAGTATG TCGATTTACC AAAAGGCGAA ACTGATTTGC TTTACATGGC GATAGATGGG TACTGCTACA TCAATATATT CTTAGCAATG CTCATCAATG TGCGTGAAGA TGAAGCTAAG GATTTCACTA AGAAAGTTCG GGACATCTTC ATTCCTAAGC TTGGTAAGTG GCCGTCCATG CTTGATTTAG CCACAACATG TGCGCAATTG AGAATATTCT TTCCAGATGT GCATGATGCA GAGCTCCCAC GCATCTTAGT GGATCATAAC AGTCAAATAT GCCATGTTGT GGATTCTTTT GGCTCCATAA GCTCAGGTTA TCACATTCTC AAAGCATCAA CAGTGTCGCA ACTCATTTTG TTTGCTAATG ATGAGCTTGA ATCTGATATC AAGCACTATA GGGTTGGAGG ATTGGAAAAA TTCGATCCCA ATGTAGCTCA GAGGTGCAGC ATTAGTGAGT TCTATGCAAT GCGTATGCTC ATAAAAGGAG TGTATAGACC AGCTGTGATG CGACAGTTAC TTATGGATGA ACCATACATG CTAATTTTCT CAATACTCTC TCCTCGCGTT CTTATCGCTA TGTTTGAGAA TGATGCATTT GAGGAAGCCG CTAAATTGTG GGTTAATAAA AGTCAATCAG TGGCAATGAT AGCCACAATA CTGAACAATT TGGCAAGAAA GGTGACACTG GCTGAAAGTT TAACCAGGCA GTTGCACCTA ATTAGTCATG CCCCAGAACA ACTTTTGGAT GCAACCTGTG AGGGGTTCAA AATGAATCTT GCCTACCAAT CAGCACTGAT GCTATTACTT CGAACAAGAG AGACGAGTAA GAGCAATCTT GAATTGATTA CCAGTGGCTA TGCGCATCAG GAAATGGAAT TGGCGGAAAC TCTTGAAAAA AGTTACACAG ACCTTTTGCT AGCGCAGTGG CACGAATTAA GCTGGCGGGA AAAATTGTTA TCAACATGGC GATCAAGAAG GTCAAGAGGA AGACTTCAGA AAATCACACT GGGCGAAAGA GTGCAAGATT TGAGAGAAAC TTTCTCTTTC TCTCCGAAAA TATTGTTTAC AGAAGCATCA GTTCGCACAA AAGCCTTGGT AAATAAGTCC ACAGGAATGT TTTCCTCATT CGTAGAAAGA AAGTGTGTAA ATATTTCAGC CTACTGCCTG GGTAGTGTTT TTAGTAGATT ACCGAGTTTT AAATTTTTAT TCTATAATGT AATAGTATTT GGCAATCTAG TTAATATATA TAGGAATATT AATACGATAG TAGGGGAGAA TAAGAGGAGT AAAATAAAAG CGGCGCAAGC GGATCACGAA CTGCAAGTGA ATGCATGTGT CGAATTGTAC GCAGCACTTG AAAGAAAGCT CGGAAAGCAG CCAACATGGA ACGAGTACTG TGAATATGTG GAGAAGATGA ACTCAGCACT TTTGCCAATC TTTAGAGAAA CATATGCCAG CGCAGAAGTT GTTCATCAGG ACTCCAAATC TGACTTGAAG AAGATTGAGC ACATAATCGC TTTTGTCTCT CTCGCAGTAA TGCTTTTTGA TGTTGAACGT AGTGATTGCG TGTTCAAGTC TCTTAACAAA TTCAAGGGTG TGATTGGTTC ACTCAACTCC GATGTGAGAC ATCAAAGTGT GGATGACATT GTTAAGGATT TTGAAAATAG GGATTGTGTG GTGGACTTTG AAATCGATGA TTCCATTAGC CCAACCATCA ATGCCACAGA CATCATGTTT GGAGATTGGT GGGACCAACA AGTAGCAGCA GGTTTAACGA TTCCACATTA TAGAACTGAA GGGAAGTTCT ATGAGTTCAC GCGAGCTACA GCTGCTAAGG TGGCCAGCGA CATTGCCATG AGCGAGCACA ATGATTTTCT TGTCCGAGGA GCCGTAGGAT CCGGGAAATC AACTGGGCTT CCCAACTACT TAAGCTCAAT GGGGAAAGTG CTGCTAATCG AACCAACACG GCCTTTGGCT GAGAATGTCT ACAAGCAGTT GTCTGGAGCA CCATTTTTCT TAAAGCCTAC AATGCGCATG CGTGGGAACA GTGTGTTTGG GTCCAGTCCT ATTTCAGTGA TGACTAGTGG CTTTGCCCTA CACTACTTTG CACACAACAT CACACATCTG CAGGAGGTCA GGTTTGTGAT TATCGATGAA TGCCACGTAA TGGACGCTTC TTCGATGGCA TTTAGAAGCC TAGTGCAAGC ATATCATCAG AAATGCAAGG TTTTGAAAGT CTCAGCAACA CCACCAGGGA GAGAGGTTGA ATTCACAACT CAATTTCCTG TTAAGTTGGT AGTGGAGGAG AGCCTTAGTT GTAAACAATT TGTTGACGCC CAAAGAACTG GGGGCAATGC TGATGTCGTG CAACATGGTG TGAACATACT CGTGTATGTT GCAAGCTACA ATGAGGTTGA CATGCTTTCA AAAGCTTTGA TCGAAAAAGA CTTTTCTGTC ACGAAGGTTG ATGGTAGAAC CATGAAGCAT GGCGATTTGG AGATAACAAC ACATGGCACA CAAAGCAAAC CCCATTTTGT GGTAGCTACA AACATCATCG AGAACGGTGT TACTTTGGAT ATCGATGTTG TAGTTGACTT TGGTTTGAAG GTAGTTCCGT TCCTTGACAT GGATAACAGA AGCATCGCAT ACACCAAGAC TAGCATTAGT TACGGTGAGC GTATTCAGAG GCTAGGAAGA GTAGGAAGAA TACAGAAAGG AACCGCTTTG AGAATTGGTT CAACTGAAAA GGGATTAGTT GAAATACCGC AGATGATTTC AACGGAAGCT GCACTCTATT GTTTTGCATA CAATTTGCCC GTGATGTCAA GCTGCGTTCC AACAGCACTA CTCTCAAAGT GCACACTTAG ACAAGTACAG GTAATGCATA ACTTTGAGTT AACACCATTC TTTACCTGCA ACTTTGTGAC ACATGAAGGA ACAATGCACC CAGTCATTCA CGACTTGCTA AAGAAGTACA AACTCAGGGA TTCTATTATT CCTCTCAGTG AGAGTGCAGT TCCTTATAGA GCATCAAGTG AGTGGTTGCG GGCCATTGAT TATACAAGAA TGGGCATCCA TCTGGATCTG CCTGATACAG TCAAGCTTGC ATTTCACACG AAGGACATTC CAGCAGCTTT GCATGAGAAA TTGTGGGATG CAGTGAACAA ATACAAAAGA GAGGCATCTT TTCCTACTCT GCGTAGTTCA TCTGTTAGCA AAATTGCATA CACACTTAGT ACGGATCTTT ATGCAATTCC TAGGACGTTG ATCCTAATTG AAAAACTCAT TGAAGATGAA CGTACAAAAC AGTTCCAGTT TAGAAGCGCT ATTGATAACG GTTGTTCTAG CGCTTTTTCA ATAGTTGGTA TAGCAAACAC TCTGCGTGCT AGATACTCAA AAGATTATAC CACTGAGAAT ATTAAAAAGC TTGAAATGGC AAAGGCCCAA CTGAAAGAAT TTAGCAATCT GGGTGGAACT GGGGATGAAA CAAACCTCAT AAAGCGGTTT GAAGCATTGC AATTTGTACA TCATCAATCC AAGCACACAT TGTCTAAGGC CCTGTCACTA GAGGGAATTT GGAATAAATC ACTGGCTGTC CGTGATACAA TAATAGCTGT TGGAGTTGCT TGTGGTGGCG CTTGGATGCT ATACACATGG TTCACAAGCG AAATTAATGG TGTCACGCAT CAAGGTAGGA GCAAGTCAAA AAGGATTCAA GATCTAAAAT TCCGGAGAGC GAGAGATAAA AGAGCTGGAT TTGAGATTGA CAATAATGAG GACACCATTG AAGAGTACTT TGGCTCAGCA TACACCAAGA AAGGCAAGGG AAGAGGAACA ACAGTTGGAA TGGGCAAATC ATCGCGTAAA TTCATAAACA TGTATGGGTT CGAGCCAACT GAATATTCTT ACATTAAATT TGTCGACCCT TTGACTGGGG CGCAAATTGA GGATAATGTG TATGCTGACA TTGTAGATAT TCAAGAGAAG TTTGGTGAAA TACGTCGCAA TAAGATCATA GATGATAAAC TTGATACACA AGCGACGTAT GACAACAACA CCATCCATGC TTACATGATA AAGGATTGGT CCAAAGAAGC GCTCAAGATT GATCTAACAC CCCACAACCC TCTGAGGGTC AGCGATAAGG CTAGCACCAT AATGAAATTT CCAGAGAGAC AAGGGGAGTT AAGGCAAACT GGAATTGGGA CAGTGGTTAA TGTGGATGAT ATCCCCAAAG AAGCAGTAGC ACATGAGGCT AAGTCATTGC TCAAGGGGTT GAGGGATTAC AACTCAACTG CACAAACTGT GTGCTTGCTG ACAGTTGAAA CAGAGACGGG AAAGACCACA ACACATGGTA TTGGTTTCGG ATCTCTGCTT GTTGCAAATC ACCATCTGTT TAAGAGCTTT AACGGAACAT TGACAGTGCG TTCGCACCAT GGAATTTTTA AAGTCCAAAA CTTAATGCAA CTGCAAGTGC AACCACTGAA GGGAAGAGAT CTTATAGTTA TAAAGTTGCC AAAGGACTTT CCAGTGTTTC CACAGAAGCT ACATTTTAGA GCACCAACAC AGCAAGATAG AGTGGTTCTT GTAGGTTCAA ACTTTCAGGA GAAGTATATT TCAACTACTT TGTCAGAGAC AAGTTCCACA TTTCCAGTTC AAAGAAGTTC TTTTTGGAAA CACTGGATTT CAACAAACGA TGGGAACTGC GGGTTACCAT TGGTGAGTAC TGTGGATGGC TACATATTAG GATTGCATAG TTTAGCTAAT AATAGAAATA GTGAGAATTA TTTTGCAGCT TTTGATGATG AATTTGAGAG TAAATACTTG CGGACAGAGG AGCATGCACA GTGGACCCGC AACTGGAAGT ACAATCCTGA CAATGTTTTG TGGGGTTCGT TGAAGCTGAC AAAGAGCACA CCAGACGGCA TGTTCAAAAC CACTAAAATG ATTGAAGATC TGTTGGCTTT CGAAGATAAT GATGTGCGCG AGCAAGGTCA AAGCACAGGA TGGGTGTTAA GTGCTTTAAG AGACAACCTC CAAGCAATAG CATTCATGAA AAGTCAACTT GTTACTAAGC ATGTGGTTAA AGGCGAATGC ATGTTGTTTA AGCAGTATTT AGAAAGCGAT CTACGAGCAA AACAATTCTT CCAACCGAAA ATGTGGGCAT ATGGAAAGAG CTTACTTAAC AAAGAGGCCT ACATTAAGGA TTTGATGAAG TATTCGAAAC TTATAGAGGT TGGAGTTGTA GATTGCGACG CGTTCGAGGA AGCAAACTGC AGAGTCATAG TTTATATGAG GCAAAAAGGC TTTAGAAAAT GCACTTATGT AACAGATGAG GAAGAGATTT TCAAAGCCTT AAACATGAAT GCAGCGGTTG GAGCCATGTA CGGAGGGAAG AAGAAGGACT ACTTCGCTGA TTATAGTGCC CAGGATAAAG AGCAAATCTT GAGAGAGAGC TGCCGGCGAT TATATTTAGG TGACCTTGGA GTGTGGAACG TTTCACTAAA GGCTGAATTG CGCTGCAAAG AGAAAATCGC GGCAAATAAG ACACGCACTT TCACAGCTGC ACCCATTGAT ACATTGCTGG CAGGAAAAGT GTGTGTGGAT GATTTCAACA ACCAATTCTA CAGCAAAAAC ATTGAGTGTT GTTGGACTGT TGGTATGACA AAGTTTTATG GAGGCTGGAA CAAGTTACTT ACAGCTTTGC CAGACAATTG GGTTTACTGC GATGCTGATG GGTCGCAATT TGACAGCTCA CTAACCCCAT ACTTGATAAA TGCAGTGTCG GCTGTGAGGT ATGCGTTCAT GGAGGATTGG GATATTGGAT TTCAGATGCT CCAGAATCTC TACACTGAGA TAGTTTATAC ACCAATCTCC ACGCCCGATG GAACGATTGT CAAGAAGTTT AGAGGCAACA ACAGCGGCCA ACCTTCAACC GTGGTAGACA ACTCGCTCAT GGTAGTCTTA GCTATGCATT ATAGCTTTGT AAAAGCCAAT ATCCCTTATG ATGAGTTTGA ATCAATGTGT AAGTTCTTTG TCAACGGGGA TGATTTAATA ATAGCAGTGG CTCCAGAGTT TGAATACTTG CTAGATGAAA TGGGAGGTTA CTTTTCAGAC CTTGGCTTGA ATTATGATTT TTCATCTCGG ACTAGAGATA AAACTCAACT TTGGTTTATG TCACATCGCG GAATACTTGT GGAAGGCATT TATATACCAA AGCTTGAAGA AGAGCGAATA GTGTCAATTT TGCAGTGGGA CAGAGCAGCG CTACCTGAGT ATAGACTTGA GGCCATCTGT GCAGCTATGA TAGAGTCATG GGGGTATCCA CAGTTAACAT TTGAGATACG GAGATTCTAT CAGTGGCTAT TGCAACAGGA GCCTTACTCT CAACTGGCAG AGCAGGGCAA AGCACCATAT ATTACCGAGC TCGCACTCAA GAAATTATAT CTAAATGTAG AAGCAAGTTC AGAGGAGTTT GAGGCTTACA TGAGGTTCTT TGCAGAGATA GACGATGAAA TTGAGTGCGA TTCATTTGAA GTTAGACATC GAGCCAATGA AGAAGGTGGC ACACTCGATA CTGGTAAAGA TCAGTTAAAG GAAAAAGGAG TCAAGCCAAT GACAGCCAGC GGAAAGGCTG TTGTTAAAGA GGCCAATGAA AGGGATGTCA ATGCGGGAAC GTCTGGAACG TTCTCCATAC CGAGAATAAA GGCTATTTCT GAGAAGATGC GGCAGCCAAA GGCTAATGGT GTCAGTGCTC TTAATTTGGC TCATCTACTC GAATACAAGC CAAGCCAAGT TGACATTTCA AATGCGCGAT CAACTCAAGG CCAATTCAAC AATTGGTTTA CAGAAGTTAA GAAGGCCTAT GATGTTGAAG ATCATGAAAT GGGTACGGTG TTAAATGGAT TGATGGTCTG GTGCATCGAA AATGGAACTT CACCAAATGT GAATGGAGTT TGGACTATGA TGGATGGTGA AGACCAAGTT GAGTTCCCAC TAAAGCCAGT GGTAGAGAAC GCAAAGCCTA CTTTTAGGCA AATTATGGCG CATTTTTCCG ATGTAGCCGA AGCGTACATT GAGATGCGCA ACAAAAGCGA ACCATACATG CCACGGTATG GTCTGGTGAG AAATCTGCGA GATATGAGCT TAGCTCGATA TGCATTTGAT TTTTACGAAA TCACATCTCG CACATCCGTC CGGGCAAGAG AAGCTCATAT TCAGATGAAA GCAGCAGCTC TCAAAACTGC TCAAACTCGT TTGTTTGGAT TGGATGGTGG CATTAGTACA CAGGAGGAAA ACACAGAGAG GCACACCACT GAAGACGTGG CCCCCAATCT GCATACCATG CTTGGGGTCA GGAACATGTA ACTGAGTGTC TCTGTTCTGG GATGAAAGAT AAGTATATAT AGTATGTAGT ATATATTTTG GCTTTTCCTC GTACCAGCTT TAATTACATC GTTTACTAAA TATATAGTTA ATTGGATAAT CTCTACAGAG GTAGTCTTTT GACTCACCAT CATTTGAGTA AACTTTGTGG AGAGAGTTCA TTTTGTTTTG CATGGGGTGG CTGTGCGACA CACTCACACA GGTAAACTCA TGTATGCTTA ACTGTATGGC GATTGGGGTG GCTCAGTGAC ACACTCATTG AGGTGAACTC ATTGCTGAGA TTTAGTGGGG TGGCTTGGTG ACACACTCAC TAGGGTGAAC TCACTGGATT TCGTGTTAGT ATTTCGTAAT ATTAAGGATT CCCTAGTAAG GCGAGAGTGG CTTACATATA CTTTAGTGAG AATGTTTCTC GAATGGGTAT TTGCGAGGTG ATCGTAGCCA GTCAATGGGA GACAAAAAAA AAAAAAAAAA AAAAAAAA 
Length9878
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Virus3910
3.4641 Ahg896538
3.87298 Virus0645
4 Virus3797
6.32456 Virus3425
7.93725 Virus3631
8.3666 Ahg921580 Tetratricopeptide repeat (TPR)-like superfamily protein
8.77496 Virus3045
9.79796 Ahg944235 SEC14-like 12
10.3923 Virus0873
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression