| Annotation |
|---|
| Description | jgi|Araly1|311931|fgenesh1_pm.C_scaffold_1000711 |
| Sequence |
ATGAATATGC CGCTGTTGGA TATTCAACCA CGAACGTTGC AGTTTGCAGT TGACCTGAAG AAGCAGAGTT CTTGCGTGGT ACAGCTAACC AATACTACCC ATCATTATGT TGCATTTAAG GTTAAAACCA CATCACCGAA GAAGTACTGT GTTCGTCCAA ATGTTGGTGT TGTTGCACCA AAATCATCCT GTGAATTCAC TGTCATTATG CAAGCTTTTA AAGAACCACC TCCAGATATG GTTTGCAAAG ACAAATTCTT AATCCAGAGT ACTGCTGTAT CTGCGGAAAC AACTGATGAA GACATCACAG CTAGCATGTT TTCGAAAGCG GAAGGCAAAC ACATAGAGGA GAACAAACTC AGAGTCACTC TTGTGCCGCC CTCTGACTCA CCTGAACTAT CTCCAATCAA TACACCGAAG CAGGAAGCAG GATTTAAAGA TTCCATCCTC AAGGATCGTT TATATAGCCA GTCAGAGACC CTAGCTCCGC CACAATATGA GGGTGAGATT GCAAAAGAGC CTAGGATGGT TGGACATGAT GAGTTAAAGG CAGCCGACAA TGCAAAGGAG TTAAATACAC CAAAAATGGC CACCGTGGAT TTTATGGAAG ATCGATATAC TGCTAATGAC TTGAAGGCAA CTAAAGATAG CTACGATTCA TCGAGGATGG CAAAAGAAAC TGGATTCGAT CCAATTAGGT CTCATAAGGA TGCAGATGAT GCAAATAATT TGGACGCTCC CATGAAGAAG GCCATGGATC TACCTAGGGA TCAAGGGTTT ACTAATGGAA TAGCTTCAGT TGACAGTGCA ACCTATTCTG ATGAGCCAAA GGTACCTAAG GAAAGAAATG TTGTCCAGCT GCAGAAAACA GATGGCCAGA ATGCCAGAGG ATTGGATGAA CTTAAGTTGG TTAAAGACAT TGAGGAGATG AAGCTGAAAG TGGATGCTGT TGAATCCAAG TTAAAACAGG CTGATTCAAC CATTTCAAAG CTAATGGAGG AACGATCGAT AAGCTCCCAA CACAGACAAA GCTTGCAACA TGAGCTGGCG GAACTGAGAA CGAAGAAGAT AGTGAAAGAA GTGCACAATG GGTTCCCTCT GCTGTATGTA TGCGTTGTGG CATTCATCAG CTATGTTATC GGGTGCTGTC TGCGCACTTG A |
| Length | 1161 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 3172140.. 3174751 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G08820.1 |
| Description | vamp/synaptobrevin-associated protein 27-2 |
| TAIR curator summary | Encodes VAP33-like protein that interacts with cowpea mosaic virus protein 60K. Is a SNARE-like protein that may be involved in vesicular transport to or from the ER. |
| Alias | [VAP27-2][vamp/synaptobrevin-associated protein 27-2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.87298 |
Ahg492484 | AMP-dependent synthetase and ligase family protein |
| 4.47214 |
Ahg481481 | Transmembrane proteins 14C |
| 10.198 |
Ahg909750 | metacaspase 1 |
| 11.4018 |
Ahg333928 | global transcription factor group E4 |
| 13.7477 |
Ahg935879 | ENTH/ANTH/VHS superfamily protein |
| 13.9642 |
Ahg493493 | Sec23/Sec24 protein transport family protein |
| 15.906 |
Ahg481186 | RING/U-box superfamily protein with ARM repeat domain |
| 21.166 |
Ahg475352 | dynamin-like 3 |
| 22.9783 |
Ahg482512 | basic region/leucine zipper transcription factor 16 |
| 23.8118 |
Ahg922878 | SEUSS transcriptional co-regulator |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|