Detail



ID : Ahg922878

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|922878|scaffold_104159.1
Sequence
AAGTTGTGAA TTGTAAGAGT ATGGTACCAT CAGAGCCGCC TAATCCTGTT GGTAGTGGCG AAAACGTTCC GCCTTCGATT TTAGGAGGAC AAGGAGGAGC TCCTCTTCCT TCTCAACCTG CATTTCCTTC ACTTGTTTCT CCGCGTACTC AGTTTGGTAA CAACATGAGT ATGAGTATGC TTGGGAATGC CCCAAACATA TCTTCACTCC TGAATAATCA GTCTTTTGTA AATGGTATTC CCGGTTCTAT GATTTCTATG GATACAAGTG GTGCTGAGGC AGACCCGCTG TCTAATGTCG GGTTTAGTGG TTTGTCATCT TTTAATGCGT CGAGTATGGT GTCCCCGCGC TCATCAGGTC AATTACAGGG TCAGCAATTC TCGAATGTTT CGTCTAACCA GTTGTTGGCA GAGCAACAAC GGAATAAGAA ATTGGAGCCT CAGAATTTTC AACATGGTCA GCAGCAGTCA ATGCAACAGC AGCAGTTTTC AACAGTGCGT GGAGGCGGGT TACCAGGTGT GGGATCTGTC AAGATGGAAC CTGGTCAGGT TTCGAACGAT CAGCAGCATG GTCAAGTACA ACAGCAGCAA CAGAAAATGT TAAGAAACCT AGGATCAGTA AAGTTGGAAC CGCAACAACA TCAGGCCATG AGGAACTTGT CCCAAGTGAA AATGGAACCT CAACATTCAG AGCAGTCATT GTTTCTCCAA CAGCAGCAGA GGCAACAACA GCAACAACAA CAACAATTTC TTCAAATGCC GGGGCAATCT CCTCAGGCTC AAATGAACAT ATTTCACCAG CAGAGACTTA TGCAACTGCA ACAACAGCAA CTTCTGAAAT CAATGCCTCA ACAGCGTCCT CAATTACCAC AGCAGTTCCA ACAGCAGAGT TTACCTCTGA GGCCACCTCT GAAACCAGTG TATGAACCTG GCATGGGTGC TCAGCGTCTT ACACAGTATA TGTACAGACA ACAACATAGG CCTGAAGACA ATAACATCGA GTTCTGGAGA AAATTTGTAG CTGAGTACTT TGCTCCTAAT GCCAAAAAGA GATGGTGCGT TTCTATGTAT GGCAGTGGCC GGCAAACAAC AGGCGTTTTC CCTCAGGATG TGTGGCACTG TGAGATATGT AACCGAAAGC CTGGACGTGG TTTTGAGGCG ACCGCCGAAG TCCTCCCGCG GCTTTTCAAG ATTAAGTATG AGAGTGGCAC TCTAGAGGAG CTGCTATATG TTGATATGCC AAGGGAATCC CAGAATTCCT CGGGACAAAT TGTTTTGGAG TACGCCAAAG CAACACAAGA GAGTGTGTTT GAGCATCTTC GAGTTGTTCG TGATGGCCAG CTTCGAATAG TCTTCTCTCC AGATCTTAAG ATATTCTCCT GGGAATTTTG TGCTCGGCGG CATGAAGAGC TTATTCCACG AAGGCTTTTG ATACCGCAGG TTAGTCAGCT TGGGTCGGCA GCTCAGAAAT ATCAGCAAGC CGCTCAAAAT GCAACAACAG ATTCTGCTCT TCCCGAGTTA CAAAATAATT GCAACATGTT TGTTGCATCT GCTAGACAAT TGGCAAAAGC TCTGGAAGTA CCACTCGTGA ATGATTTGGG ATACACAAAG AGATATGTTC GGTGTTTGCA GATCTCGGAG GTGGTAAATA GTATGAAGGA CTTGATTGAT TACAGCAGAG AAACAAGAAC AGGACCGATC GAGAGTTTAG CCAAGTTTCC TCGGAGAACA GGCCCTTCAT CTGCACTGCC TGGTCCTTCT CCTCAGCAAG CCAGCGACCA GGTAAGGCTG CAGCAACAGC AGCAGCAGCA ACAACAGCAG CAACAGCAAC AGCAACAGCA GCAAACAGTT TCCCAGAATA CAAACAGCGA TCAAAGTAGT AGGCAAGTTG CACTAATGCA GGGTAATCCC AGCAATGGTG TAAATTATGC CTTTAATGCA GCCTCTGCAT CCACCTCCAC CAGCAGCATC GCAGGGCTCA TCCACCAGAA TTCAATGAAG GCAAGACATC AGAATGCTGC TTACAATCCT CCAAACAGCC CCTATGGAGG AAACTCTGTT CAGATGCAAT CACCTAGTTC CTCGGGTACC ATGGTGCCAT CATCGCAGCA ACAACACAAC TTGCCAACAT TTCAGTCTCC AACATCCTCA TCTAATAACA ATAATCCCTC TCAAAACGGG ATACCATCTG TTAATCACAT GGGTTCCACA AACTCACCAG CAATGCAACA GGCGGGTGAG GTTGATGGAA ACGAGTCTAG CTCGGTGCAG AAGATACTGA ATGAAATCCT GATGAACAAC CAAGCTCATA ATAGCTCAGG AGGAAGCATG GTTGGGCATG GGTCTTTCGG GAATGATGGG AAGGGTCAAG CTAATGTAAA TAGTTCTGGT GTTTTGCTGA TGAATGGCCA AGTGAACAAC AACAACCCAA GTATTGGAGG TGCTGGTGGG TTTGGTGGTG GGATGGGTCA GTCCATGGCA GCTAACGGAA TCAATAATTT AAACGGTAAC AATGGTCTCA TGAACGGAAG AGTTGGGATG ATGGTGCGGG ATCCAAACAG TCAACAGGAT CTGGGAAACC AACTCTTAGG GGCAGTGAAT GGTTTTAACA ATTTTCAAGA TTGGAATGCG TGAAATGAAG ATGAAGAAGA AGA 
Length2653
Protein Sequence
Protein Residue
Map Locationscaffold_1: 21375987.. 21379879
Download Sequence
A.thaliana
AGI-codeAT1G43850.1
DescriptionSEUSS transcriptional co-regulator
TAIR curator summaryEncodes a transcriptional co-regulator of AGAMOUS, that functions with LEUNIG to repress AG in the outer floral whorls.
Alias[SEU][seuss]
Gene coexpression
MR
MR Locus Description
2 Ahg482629 demeter-like 1
3 Ahg477585 DegP protease 7
4.12311 Ahg335224 Pentatricopeptide repeat (PPR-like) superfamily protein
4.47214 Ahg484260 SPFH/Band 7/PHB domain-containing membrane-associated protein family
4.69042 Ahg482168 glutamate receptor 5
5 Ahg490214 glucan synthase-like 5
5.2915 Ahg950958 MEI2-like protein 1
6.16441 Ahg484528
6.9282 Ahg470624 SKP1/ASK-interacting protein 16
7.34847 Ahg486593 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression